Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:21:43 (25962): wrapper (7.7.26015): starting
18:21:43 (25962): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:21:43] Arguments: --nthreads 8
[2026-01-09 18:21:43] Threads: 8
[2026-01-09 18:21:43] Checking for CVMFS
[2026-01-09 18:21:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:21:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:21:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:21:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:21:44] 2.11.2.0 2830 112878 81216 154961 0 9 13665160 20275200 1 130560 0 25282029 99.782 7259249 27885 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:21:44] CVMFS is ok
[2026-01-09 18:21:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:21:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:21:44] Further information can be found at the LHC@home message board.
[2026-01-09 18:21:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:21:44] Checking for apptainer binary...
[2026-01-09 18:21:44] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:21:44] Running /usr/bin/apptainer --version
[2026-01-09 18:21:44] apptainer version 1.3.2-1.el7
[2026-01-09 18:21:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:21:46] c-204-5.aglt2.org
[2026-01-09 18:21:46] apptainer works
[2026-01-09 18:21:46] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:21:46] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:21:46] Starting ATLAS job with PandaID=6963194355
[2026-01-09 18:21:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:19:27]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:19:27] 2026-01-10 02:18:24,872 | INFO     | PID=29715 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 21:19:27] 2026-01-10 02:18:25,873 | INFO     | time since job start (10582s) is within the limit (349056.0s)
[2026-01-09 21:19:27] 2026-01-10 02:18:26,053 | WARNING  | process 3848 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 21:19:27] 2026-01-10 02:18:26,054 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963194355/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:19:27] 2026-01-10 02:18:26,154 | INFO     | number of running child processes to parent process 3848: 1
[2026-01-09 21:19:27] 2026-01-10 02:18:26,154 | INFO     | maximum number of monitored processes: 6
[2026-01-09 21:19:27] 2026-01-10 02:18:27,879 | INFO     | time since job start (10584s) is within the limit (349056.0s)
[2026-01-09 21:19:27] 2026-01-10 02:18:28,658 | INFO     | monitor loop #776: job 0:6963194355 is in state 'finished'
[2026-01-09 21:19:27] 2026-01-10 02:18:28,658 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:19:27] 2026-01-10 02:18:29,885 | INFO     | time since job start (10586s) is within the limit (349056.0s)
[2026-01-09 21:19:27] 2026-01-10 02:18:30,840 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 21:19:27] 2026-01-10 02:18:30,844 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1779.0
[2026-01-09 21:19:27] 2026-01-10 02:18:30,847 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963194355/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:19:27] 2026-01-10 02:18:30,848 | INFO     | extracted standard info from prmon json
[2026-01-09 21:19:27] 2026-01-10 02:18:30,848 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:19:27] 2026-01-10 02:18:30,848 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:19:27] 2026-01-10 02:18:30,849 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:19:27] 2026-01-10 02:18:30,849 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:19:27] 2026-01-10 02:18:30,854 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:19:27] 2026-01-10 02:18:30,854 | INFO     | sum of square deviations: 1605470102.0
[2026-01-09 21:19:27] 2026-01-10 02:18:30,855 | INFO     | sum of deviations: -13451577748.0
[2026-01-09 21:19:27] 2026-01-10 02:18:30,855 | INFO     | mean x: 1768006201.0
[2026-01-09 21:19:27] 2026-01-10 02:18:30,856 | INFO     | mean y: 2546407.1965317917
[2026-01-09 21:19:27] 2026-01-10 02:18:30,856 | INFO     | intersect: 14815947692.010752
[2026-01-09 21:19:27] 2026-01-10 02:18:30,856 | INFO     | chi2: 1.7112952883967572
[2026-01-09 21:19:27] 2026-01-10 02:18:30,857 | INFO     | sum of square deviations: 1470248962.0
[2026-01-09 21:19:27] 2026-01-10 02:18:30,858 | INFO     | sum of deviations: -12620884750.0
[2026-01-09 21:19:27] 2026-01-10 02:18:30,858 | INFO     | mean x: 1768006048.5
[2026-01-09 21:19:27] 2026-01-10 02:18:30,858 | INFO     | mean y: 2547343.785714286
[2026-01-09 21:19:27] 2026-01-10 02:18:30,858 | INFO     | intersect: 15179433131.256456
[2026-01-09 21:19:27] 2026-01-10 02:18:30,858 | INFO     | chi2: 1.7103324124494157
[2026-01-09 21:19:27] 2026-01-10 02:18:30,859 | INFO     | current chi2=1.7103324124494157 (change=0.05626591470625367 %)
[2026-01-09 21:19:27] 2026-01-10 02:18:30,859 | INFO     | right removable region: 167
[2026-01-09 21:19:27] 2026-01-10 02:18:30,859 | INFO     | sum of square deviations: 1470248962.0
[2026-01-09 21:19:27] 2026-01-10 02:18:30,860 | INFO     | sum of deviations: -40142150257.00001
[2026-01-09 21:19:27] 2026-01-10 02:18:30,860 | INFO     | mean x: 1768006353.5
[2026-01-09 21:19:27] 2026-01-10 02:18:30,860 | INFO     | mean y: 2576109.869047619
[2026-01-09 21:19:27] 2026-01-10 02:18:30,860 | INFO     | intersect: 48274384852.37212
[2026-01-09 21:19:27] 2026-01-10 02:18:30,861 | INFO     | chi2: 0.2008822212700613
[2026-01-09 21:19:27] 2026-01-10 02:18:30,861 | INFO     | current chi2=0.2008822212700613 (change=88.26139342332557 %)
[2026-01-09 21:19:27] 2026-01-10 02:18:30,861 | INFO     | sum of square deviations: 1342841922.0
[2026-01-09 21:19:27] 2026-01-10 02:18:30,862 | INFO     | sum of deviations: -41246337670.0
[2026-01-09 21:19:27] 2026-01-10 02:18:30,862 | INFO     | mean x: 1768006506.0
[2026-01-09 21:19:27] 2026-01-10 02:18:30,862 | INFO     | mean y: 2577367.6687116562
[2026-01-09 21:19:27] 2026-01-10 02:18:30,862 | INFO     | intersect: 54308145398.06036
[2026-01-09 21:19:27] 2026-01-10 02:18:30,863 | INFO     | chi2: 0.16296293327495898
[2026-01-09 21:19:27] 2026-01-10 02:18:30,863 | INFO     | current chi2=0.16296293327495898 (change=18.876378285425535 %)
[2026-01-09 21:19:27] 2026-01-10 02:18:30,863 | INFO     | left removable region: 20
[2026-01-09 21:19:27] 2026-01-10 02:18:30,863 | INFO     | sum of square deviations: 984941258.0
[2026-01-09 21:19:27] 2026-01-10 02:18:30,864 | INFO     | sum of deviations: -30857312684.999992
[2026-01-09 21:19:27] 2026-01-10 02:18:30,864 | INFO     | mean x: 1768006628.0
[2026-01-09 21:19:27] 2026-01-10 02:18:30,864 | INFO     | mean y: 2567579.3469387754
[2026-01-09 21:19:27] 2026-01-10 02:18:30,864 | INFO     | intersect: 55392605214.81826
[2026-01-09 21:19:27] 2026-01-10 02:18:30,865 | INFO     | chi2: 0.15304527855289415
[2026-01-09 21:19:27] 2026-01-10 02:18:30,865 | INFO     | current memory leak: -31.33 B/s (using 147 data points, chi2=0.15)
[2026-01-09 21:19:27] 2026-01-10 02:18:30,865 | INFO     | could have reported an average CPU frequency of 2027 MHz (9 samples)
[2026-01-09 21:19:27] 2026-01-10 02:18:30,866 | INFO     | ..............................
[2026-01-09 21:19:27] 2026-01-10 02:18:30,866 | INFO     | . Timing measurements:
[2026-01-09 21:19:27] 2026-01-10 02:18:30,866 | INFO     | . get job = 0 s
[2026-01-09 21:19:27] 2026-01-10 02:18:30,866 | INFO     | . initial setup = 2 s
[2026-01-09 21:19:27] 2026-01-10 02:18:30,866 | INFO     | . payload setup = 8 s
[2026-01-09 21:19:27] 2026-01-10 02:18:30,866 | INFO     | . stage-in = 0 s
[2026-01-09 21:19:27] 2026-01-10 02:18:30,866 | INFO     | . payload execution = 10548 s
[2026-01-09 21:19:27] 2026-01-10 02:18:30,866 | INFO     | . stage-out = 0 s
[2026-01-09 21:19:27] 2026-01-10 02:18:30,866 | INFO     | . log creation = 0 s
[2026-01-09 21:19:27] 2026-01-10 02:18:30,867 | INFO     | ..............................
[2026-01-09 21:19:27] 2026-01-10 02:18:31,402 | INFO     | 
[2026-01-09 21:19:27] 2026-01-10 02:18:31,402 | INFO     | job summary report
[2026-01-09 21:19:27] 2026-01-10 02:18:31,403 | INFO     | --------------------------------------------------
[2026-01-09 21:19:27] 2026-01-10 02:18:31,403 | INFO     | PanDA job id: 6963194355
[2026-01-09 21:19:27] 2026-01-10 02:18:31,403 | INFO     | task id: 47898826
[2026-01-09 21:19:27] 2026-01-10 02:18:31,403 | INFO     | errors: (none)
[2026-01-09 21:19:27] 2026-01-10 02:18:31,403 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:19:27] 2026-01-10 02:18:31,404 | INFO     | pilot state: finished 
[2026-01-09 21:19:27] 2026-01-10 02:18:31,404 | INFO     | transexitcode: 0
[2026-01-09 21:19:27] 2026-01-10 02:18:31,404 | INFO     | exeerrorcode: 0
[2026-01-09 21:19:27] 2026-01-10 02:18:31,404 | INFO     | exeerrordiag: 
[2026-01-09 21:19:27] 2026-01-10 02:18:31,404 | INFO     | exitcode: 0
[2026-01-09 21:19:27] 2026-01-10 02:18:31,404 | INFO     | exitmsg: OK
[2026-01-09 21:19:27] 2026-01-10 02:18:31,405 | INFO     | cpuconsumptiontime: 79398 s
[2026-01-09 21:19:27] 2026-01-10 02:18:31,405 | INFO     | nevents: 400
[2026-01-09 21:19:27] 2026-01-10 02:18:31,405 | INFO     | neventsw: 0
[2026-01-09 21:19:27] 2026-01-10 02:18:31,405 | INFO     | pid: 3848
[2026-01-09 21:19:27] 2026-01-10 02:18:31,405 | INFO     | pgrp: 3848
[2026-01-09 21:19:27] 2026-01-10 02:18:31,405 | INFO     | corecount: 8
[2026-01-09 21:19:27] 2026-01-10 02:18:31,406 | INFO     | event service: False
[2026-01-09 21:19:27] 2026-01-10 02:18:31,406 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 11: 2284289, 10561: 2313232, 10562: 2322414, 10570: 2322616}
[2026-01-09 21:19:27] 2026-01-10 02:18:31,406 | INFO     | --------------------------------------------------
[2026-01-09 21:19:27] 2026-01-10 02:18:31,406 | INFO     | 
[2026-01-09 21:19:27] 2026-01-10 02:18:31,406 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 21:19:27] 2026-01-10 02:18:31,433 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,434 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,434 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,434 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,435 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,435 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,435 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,435 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,435 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,435 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,436 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,436 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,436 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,436 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,436 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,437 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,437 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,437 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:19:27] 2026-01-10 02:18:31,437 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,437 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:19:27] 2026-01-10 02:18:31,438 | INFO     | job 6963194355 has completed (purged errors)
[2026-01-09 21:19:27] 2026-01-10 02:18:31,438 | INFO     | overall cleanup function is called
[2026-01-09 21:19:27] 2026-01-10 02:18:32,446 | INFO     | --- collectZombieJob: --- 10, [3848]
[2026-01-09 21:19:27] 2026-01-10 02:18:32,446 | INFO     | zombie collector waiting for pid 3848
[2026-01-09 21:19:27] 2026-01-10 02:18:32,447 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:19:27] 2026-01-10 02:18:32,447 | INFO     | collected zombie processes
[2026-01-09 21:19:27] 2026-01-10 02:18:32,447 | INFO     | will attempt to kill all subprocesses of pid=3848
[2026-01-09 21:19:27] 2026-01-10 02:18:32,536 | INFO     | process IDs to be killed: [3848] (in reverse order)
[2026-01-09 21:19:27] 2026-01-10 02:18:32,594 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:19:27] 2026-01-10 02:18:32,594 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:19:27] 2026-01-10 02:18:32,599 | INFO     | did not find any defunct processes belonging to 3848
[2026-01-09 21:19:27] 2026-01-10 02:18:32,602 | INFO     | did not find any defunct processes belonging to 3848
[2026-01-09 21:19:27] 2026-01-10 02:18:32,602 | INFO     | ready for new job
[2026-01-09 21:19:27] 2026-01-10 02:18:32,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:19:27] 2026-01-10 02:18:32,605 | INFO     | ***************************************
[2026-01-09 21:19:27] 2026-01-10 02:18:32,605 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:19:27] 2026-01-10 02:18:32,605 | INFO     | ***************************************
[2026-01-09 21:19:27] 2026-01-10 02:18:32,605 | INFO     | 
[2026-01-09 21:19:27] 2026-01-10 02:18:32,606 | INFO     | architecture information:
[2026-01-09 21:19:27] 2026-01-10 02:18:32,606 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:19:27] 2026-01-10 02:18:32,625 | INFO     | cat /etc/os-release:
[2026-01-09 21:19:27] NAME="CentOS Linux"
[2026-01-09 21:19:27] VERSION="7 (Core)"
[2026-01-09 21:19:27] ID="centos"
[2026-01-09 21:19:27] ID_LIKE="rhel fedora"
[2026-01-09 21:19:27] VERSION_ID="7"
[2026-01-09 21:19:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:19:27] ANSI_COLOR="0;31"
[2026-01-09 21:19:27] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:19:27] HOME_URL="https://www.centos.org/"
[2026-01-09 21:19:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:19:27] 
[2026-01-09 21:19:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:19:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:19:27] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:19:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:19:27] 
[2026-01-09 21:19:27] 2026-01-10 02:18:32,625 | INFO     | ***************************************
[2026-01-09 21:19:27] 2026-01-10 02:18:33,128 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 21:19:27] 2026-01-10 02:18:33,148 | INFO     | sufficient remaining disk space (18540920832 B)
[2026-01-09 21:19:27] 2026-01-10 02:18:33,149 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:19:27] 2026-01-10 02:18:33,149 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:19:27] 2026-01-10 02:18:33,149 | INFO     | update_server=False
[2026-01-09 21:19:27] 2026-01-10 02:18:33,149 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:19:27] 2026-01-10 02:18:33,150 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:19:27] 2026-01-10 02:18:33,150 | INFO     | aborting loop
[2026-01-09 21:19:27] 2026-01-10 02:18:33,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:19:27] 2026-01-10 02:18:33,810 | INFO     | all data control threads have been joined
[2026-01-09 21:19:27] 2026-01-10 02:18:33,832 | INFO     | all job control threads have been joined
[2026-01-09 21:19:27] 2026-01-10 02:18:33,866 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:19:27] 2026-01-10 02:18:34,129 | INFO     | all payload control threads have been joined
[2026-01-09 21:19:27] 2026-01-10 02:18:34,152 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:18:34,155 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:18:34,478 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:18:34,577 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:18:34,779 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:18:34,816 | INFO     | [data] control thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:18:34,836 | INFO     | [job] control thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:18:35,069 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:18:35,135 | INFO     | [payload] control thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:18:35,272 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:18:35,274 | INFO     | [job] validate thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:18:35,379 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:18:35,502 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:18:35,795 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:18:35,983 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:19:27] 2026-01-10 02:18:36,989 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:18:37,868 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:19:27] 2026-01-10 02:19:03,093 | INFO     | PID=29715 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 21:19:27] 2026-01-10 02:19:03,094 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:19:27] 2026-01-10 02:19:03,094 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:19:27] 2026-01-10 02:19:03,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:19:27] 2026-01-10 02:19:20,647 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:19:27] 2026-01-10 02:19:21,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140321609578304)>', '<ExcThread(monitor, started 140321295931136)>']
[2026-01-09 21:19:27] 2026-01-10 02:19:22,180 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:19:27] 2026-01-10 02:19:22,180 | INFO     | [monitor] control thread has ended
[2026-01-09 21:19:27] 2026-01-10 02:19:26,948 | INFO     | all workflow threads have been joined
[2026-01-09 21:19:27] 2026-01-10 02:19:26,948 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:19:27] 2026-01-10 02:19:26,949 | INFO     | traces error code: 0
[2026-01-09 21:19:27] 2026-01-10 02:19:26,949 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:19:27] 2026-01-10 02:19:27,076 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:19:27] 2026-01-10 02:19:27,080 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:19:27] 2026-01-10 02:19:27,085 [wrapper] pilotpid: 29715
[2026-01-09 21:19:27] 2026-01-10 02:19:27,090 [wrapper] Pilot exit status: 0
[2026-01-09 21:19:27] 2026-01-10 02:19:27,108 [wrapper] pandaids: 6963194355
[2026-01-09 21:19:27] 2026-01-10 02:19:27,158 [wrapper] cleanup supervisor_pilot 17567 29716
[2026-01-09 21:19:27] 2026-01-10 02:19:27,164 [wrapper] Test setup, not cleaning
[2026-01-09 21:19:27] 2026-01-10 02:19:27,169 [wrapper] apfmon messages muted
[2026-01-09 21:19:27] 2026-01-10 02:19:27,173 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:19:27] 2026-01-10 02:19:27,178 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:19:27]  *** Error codes and diagnostics ***
[2026-01-09 21:19:27]     "exeErrorCode": 0,
[2026-01-09 21:19:27]     "exeErrorDiag": "",
[2026-01-09 21:19:27]     "pilotErrorCode": 0,
[2026-01-09 21:19:27]     "pilotErrorDiag": "",
[2026-01-09 21:19:27]  *** Listing of results directory ***
[2026-01-09 21:19:27] total 436900
[2026-01-09 21:19:27] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 21:19:27] -rwx------ 1 boincer umatlas     36322 Jan  8 23:26 runpilot2-wrapper.sh
[2026-01-09 21:19:27] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-09 21:19:27] -rw-r--r-- 1 boincer umatlas       100 Jan  9 18:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:19:27] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 18:21 run_atlas
[2026-01-09 21:19:27] -rw-r--r-- 1 boincer umatlas       105 Jan  9 18:21 job.xml
[2026-01-09 21:19:27] -rw-r--r-- 2 boincer umatlas 222864274 Jan  9 18:21 EVNT.47898824._001515.pool.root.1
[2026-01-09 21:19:27] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:21 start_atlas.sh
[2026-01-09 21:19:27] drwxrwx--x 2 boincer umatlas      4096 Jan  9 18:21 shared
[2026-01-09 21:19:27] -rw-r--r-- 2 boincer umatlas    592403 Jan  9 18:21 input.tar.gz
[2026-01-09 21:19:27] -rw-r--r-- 1 boincer umatlas         0 Jan  9 18:21 boinc_lockfile
[2026-01-09 21:19:27] -rw-r--r-- 1 boincer umatlas      2520 Jan  9 18:21 pandaJob.out
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas        57 Jan  9 18:21 setup.sh.local
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas    989374 Jan  9 18:22 agis_schedconf.cvmfs.json
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas   1516240 Jan  9 18:22 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:19:27] drwx------ 5 boincer umatlas      4096 Jan  9 18:22 pilot3
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas 216833630 Jan  9 21:17 HITS.47898826._039418.pool.root.1
[2026-01-09 21:19:27] -rw-r--r-- 1 boincer umatlas       530 Jan  9 21:17 boinc_task_state.xml
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas      1062 Jan  9 21:18 memory_monitor_summary.json
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas    416225 Jan  9 21:18 log.47898826._039418.job.log.tgz.1
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas      7853 Jan  9 21:18 heartbeat.json
[2026-01-09 21:19:27] -rw-r--r-- 1 boincer umatlas      5910 Jan  9 21:18 init_data.xml
[2026-01-09 21:19:27] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 21:18 boinc_mmap_file
[2026-01-09 21:19:27] -rw-r--r-- 1 boincer umatlas        28 Jan  9 21:18 wrapper_checkpoint.txt
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas        95 Jan  9 21:19 pilot_heartbeat.json
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas      4746 Jan  9 21:19 pilotlog.txt
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas   1466839 Jan  9 21:19 log.47898826._039418.job.log.1
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas       357 Jan  9 21:19 output.list
[2026-01-09 21:19:27] -rw-r--r-- 1 boincer umatlas       620 Jan  9 21:19 runtime_log
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas   1904640 Jan  9 21:19 result.tar.gz
[2026-01-09 21:19:27] -rw-r--r-- 1 boincer umatlas      9338 Jan  9 21:19 runtime_log.err
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas       662 Jan  9 21:19 k0rMDmlFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsDhKDmBBDj8n.diag
[2026-01-09 21:19:27] -rw-r--r-- 1 boincer umatlas     21397 Jan  9 21:19 stderr.txt
[2026-01-09 21:19:27] HITS file was successfully produced:
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas 216833630 Jan  9 21:17 shared/HITS.pool.root.1
[2026-01-09 21:19:27]  *** Contents of shared directory: ***
[2026-01-09 21:19:27] total 431860
[2026-01-09 21:19:27] -rw-r--r-- 2 boincer umatlas 222864274 Jan  9 18:21 ATLAS.root_0
[2026-01-09 21:19:27] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:21 start_atlas.sh
[2026-01-09 21:19:27] -rw-r--r-- 2 boincer umatlas    592403 Jan  9 18:21 input.tar.gz
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas 216833630 Jan  9 21:17 HITS.pool.root.1
[2026-01-09 21:19:27] -rw------- 1 boincer umatlas   1904640 Jan  9 21:19 result.tar.gz
21:19:29 (25962): run_atlas exited; CPU time 79354.965450
21:19:29 (25962): called boinc_finish(0)

</stderr_txt>
]]>

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