Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
12:16:12 (193402): wrapper (7.7.26015): starting
12:16:12 (193402): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 12:16:12] Arguments: --nthreads 3
[2026-01-10 12:16:12] Threads: 3
[2026-01-10 12:16:12] Checking for CVMFS
[2026-01-10 12:16:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 12:16:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 12:16:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 12:16:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 12:16:13] 2.13.3.0 1870 1269 61980 154978 1 56 3639418 4096000 0 130560 0 506188 99.978 49274 84 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
[2026-01-10 12:16:13] CVMFS is ok
[2026-01-10 12:16:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 12:16:13] Checking for apptainer binary...
[2026-01-10 12:16:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 12:16:13] Running /usr/bin/apptainer --version
[2026-01-10 12:16:13] apptainer version 1.4.5-2.el9
[2026-01-10 12:16:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 12:16:13] ahanllin05
[2026-01-10 12:16:13] apptainer works
[2026-01-10 12:16:13] Set ATHENA_PROC_NUMBER=3
[2026-01-10 12:16:13] Set ATHENA_CORE_NUMBER=3
[2026-01-10 12:16:13] Starting ATLAS job with PandaID=6962015559
[2026-01-10 12:16:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 16:30:49]  *** The last 200 lines of the pilot log: ***
[2026-01-10 16:30:49] 2026-01-10 15:29:48,373 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 16:30:49] 2026-01-10 15:29:48,967 | INFO     | time since job start (15210s) is within the limit (174528.0s)
[2026-01-10 16:30:49] 2026-01-10 15:29:50,006 | INFO     | PID=197088 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 16:30:49] 2026-01-10 15:29:50,412 | WARNING  | process 203446 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 16:30:49] 2026-01-10 15:29:50,412 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6962015559/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 16:30:49] 2026-01-10 15:29:50,437 | INFO     | number of running child processes to parent process 203446: 1
[2026-01-10 16:30:49] 2026-01-10 15:29:50,437 | INFO     | maximum number of monitored processes: 6
[2026-01-10 16:30:49] 2026-01-10 15:29:51,006 | INFO     | time since job start (15213s) is within the limit (174528.0s)
[2026-01-10 16:30:49] 2026-01-10 15:29:51,971 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 16:30:49] 2026-01-10 15:29:51,972 | INFO     | found 3 cores (3 cores per socket, 1 socket) , CPU MHz: 806.4
[2026-01-10 16:30:49] 2026-01-10 15:29:51,972 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6962015559/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 16:30:49] 2026-01-10 15:29:51,972 | INFO     | extracted standard info from prmon json
[2026-01-10 16:30:49] 2026-01-10 15:29:51,973 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 16:30:49] 2026-01-10 15:29:51,973 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 16:30:49] 2026-01-10 15:29:51,973 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 16:30:49] 2026-01-10 15:29:51,973 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 16:30:49] 2026-01-10 15:29:51,975 | INFO     | fitting pss+swap vs Time
[2026-01-10 16:30:49] 2026-01-10 15:29:51,975 | INFO     | sum of square deviations: 4787066500.0
[2026-01-10 16:30:49] 2026-01-10 15:29:51,976 | INFO     | sum of deviations: -92792996748.00002
[2026-01-10 16:30:49] 2026-01-10 15:29:51,976 | INFO     | mean x: 1768051362.0
[2026-01-10 16:30:49] 2026-01-10 15:29:51,976 | INFO     | mean y: 2412343.690763052
[2026-01-10 16:30:49] 2026-01-10 15:29:51,976 | INFO     | intersect: 34274504507.934353
[2026-01-10 16:30:49] 2026-01-10 15:29:51,976 | INFO     | chi2: 1.5958847929251576
[2026-01-10 16:30:49] 2026-01-10 15:29:51,977 | INFO     | sum of square deviations: 4504437945.0
[2026-01-10 16:30:49] 2026-01-10 15:29:51,977 | INFO     | sum of deviations: -90411793153.50002
[2026-01-10 16:30:49] 2026-01-10 15:29:51,978 | INFO     | mean x: 1768051209.5
[2026-01-10 16:30:49] 2026-01-10 15:29:51,978 | INFO     | mean y: 2413628.7090163934
[2026-01-10 16:30:49] 2026-01-10 15:29:51,978 | INFO     | intersect: 35490233017.04105
[2026-01-10 16:30:49] 2026-01-10 15:29:51,978 | INFO     | chi2: 1.586551534922929
[2026-01-10 16:30:49] 2026-01-10 15:29:51,978 | INFO     | current chi2=1.586551534922929 (change=0.5848328177324896 %)
[2026-01-10 16:30:49] 2026-01-10 15:29:51,978 | INFO     | right removable region: 243
[2026-01-10 16:30:49] 2026-01-10 15:29:51,978 | INFO     | sum of square deviations: 4504437945.0
[2026-01-10 16:30:49] 2026-01-10 15:29:51,979 | INFO     | sum of deviations: -107595144630.00002
[2026-01-10 16:30:49] 2026-01-10 15:29:51,979 | INFO     | mean x: 1768051514.5
[2026-01-10 16:30:49] 2026-01-10 15:29:51,979 | INFO     | mean y: 2420136.344262295
[2026-01-10 16:30:49] 2026-01-10 15:29:51,979 | INFO     | intersect: 42234938541.23885
[2026-01-10 16:30:49] 2026-01-10 15:29:51,979 | INFO     | chi2: 0.5442417066373701
[2026-01-10 16:30:49] 2026-01-10 15:29:51,979 | INFO     | current chi2=0.5442417066373701 (change=65.89718073321515 %)
[2026-01-10 16:30:49] 2026-01-10 15:29:51,979 | INFO     | sum of square deviations: 4233158440.0
[2026-01-10 16:30:49] 2026-01-10 15:29:51,980 | INFO     | sum of deviations: -96621833524.0
[2026-01-10 16:30:49] 2026-01-10 15:29:51,980 | INFO     | mean x: 1768051667.0
[2026-01-10 16:30:49] 2026-01-10 15:29:51,980 | INFO     | mean y: 2413966.041841004
[2026-01-10 16:30:49] 2026-01-10 15:29:51,980 | INFO     | intersect: 40358189978.69321
[2026-01-10 16:30:49] 2026-01-10 15:29:51,980 | INFO     | chi2: 0.5328365173957217
[2026-01-10 16:30:49] 2026-01-10 15:29:51,981 | INFO     | current chi2=0.5328365173957217 (change=2.0956110313772354 %)
[2026-01-10 16:30:49] 2026-01-10 15:29:51,981 | INFO     | left removable region: 20
[2026-01-10 16:30:49] 2026-01-10 15:29:51,981 | INFO     | sum of square deviations: 3438620752.0
[2026-01-10 16:30:49] 2026-01-10 15:29:51,981 | INFO     | sum of deviations: -70540837126.0
[2026-01-10 16:30:49] 2026-01-10 15:29:51,981 | INFO     | mean x: 1768051789.0
[2026-01-10 16:30:49] 2026-01-10 15:29:51,981 | INFO     | mean y: 2400932.816143498
[2026-01-10 16:30:49] 2026-01-10 15:29:51,982 | INFO     | intersect: 36272714606.00656
[2026-01-10 16:30:49] 2026-01-10 15:29:51,982 | INFO     | chi2: 0.475070471773015
[2026-01-10 16:30:49] 2026-01-10 15:29:51,982 | INFO     | current memory leak: -20.51 B/s (using 223 data points, chi2=0.48)
[2026-01-10 16:30:49] 2026-01-10 15:29:51,982 | INFO     | could have reported an average CPU frequency of 806 MHz (12 samples)
[2026-01-10 16:30:49] 2026-01-10 15:29:51,982 | INFO     | ..............................
[2026-01-10 16:30:49] 2026-01-10 15:29:51,982 | INFO     | . Timing measurements:
[2026-01-10 16:30:49] 2026-01-10 15:29:51,982 | INFO     | . get job = 0 s
[2026-01-10 16:30:49] 2026-01-10 15:29:51,982 | INFO     | . initial setup = 1 s
[2026-01-10 16:30:49] 2026-01-10 15:29:51,982 | INFO     | . payload setup = 2 s
[2026-01-10 16:30:49] 2026-01-10 15:29:51,982 | INFO     | . stage-in = 0 s
[2026-01-10 16:30:49] 2026-01-10 15:29:51,982 | INFO     | . payload execution = 15186 s
[2026-01-10 16:30:49] 2026-01-10 15:29:51,982 | INFO     | . stage-out = 0 s
[2026-01-10 16:30:49] 2026-01-10 15:29:51,982 | INFO     | . log creation = 0 s
[2026-01-10 16:30:49] 2026-01-10 15:29:51,983 | INFO     | ..............................
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | 
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | job summary report
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | --------------------------------------------------
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | PanDA job id: 6962015559
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | task id: 47898826
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | errors: (none)
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | pilot state: finished 
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | transexitcode: 0
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | exeerrorcode: 0
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | exeerrordiag: 
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | exitcode: 0
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | exitmsg: OK
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | cpuconsumptiontime: 44390 s
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | nevents: 400
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | neventsw: 0
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | pid: 203446
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | pgrp: 203446
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | corecount: 3
[2026-01-10 16:30:49] 2026-01-10 15:29:52,021 | INFO     | event service: False
[2026-01-10 16:30:49] 2026-01-10 15:29:52,022 | INFO     | sizes: {0: 2283964, 2: 2284226, 11: 2284254, 15192: 2315522, 15194: 2324520, 15195: 2324576, 15200: 2324898}
[2026-01-10 16:30:49] 2026-01-10 15:29:52,022 | INFO     | --------------------------------------------------
[2026-01-10 16:30:49] 2026-01-10 15:29:52,022 | INFO     | 
[2026-01-10 16:30:49] 2026-01-10 15:29:52,022 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-10 16:30:49] 2026-01-10 15:29:52,031 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,031 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,031 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,031 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,031 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,031 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,031 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,031 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,031 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,031 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,031 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,032 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,032 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,032 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,032 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,032 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,032 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,032 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 16:30:49] 2026-01-10 15:29:52,032 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,032 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 16:30:49] 2026-01-10 15:29:52,032 | INFO     | job 6962015559 has completed (purged errors)
[2026-01-10 16:30:49] 2026-01-10 15:29:52,032 | INFO     | overall cleanup function is called
[2026-01-10 16:30:49] 2026-01-10 15:29:53,034 | INFO     | --- collectZombieJob: --- 10, [203446]
[2026-01-10 16:30:49] 2026-01-10 15:29:53,034 | INFO     | zombie collector waiting for pid 203446
[2026-01-10 16:30:49] 2026-01-10 15:29:53,034 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 16:30:49] 2026-01-10 15:29:53,034 | INFO     | collected zombie processes
[2026-01-10 16:30:49] 2026-01-10 15:29:53,034 | INFO     | will attempt to kill all subprocesses of pid=203446
[2026-01-10 16:30:49] 2026-01-10 15:29:53,055 | INFO     | process IDs to be killed: [203446] (in reverse order)
[2026-01-10 16:30:49] 2026-01-10 15:29:53,073 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 16:30:49] 2026-01-10 15:29:53,073 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 16:30:49] 2026-01-10 15:29:53,074 | INFO     | did not find any defunct processes belonging to 203446
[2026-01-10 16:30:49] 2026-01-10 15:29:53,075 | INFO     | did not find any defunct processes belonging to 203446
[2026-01-10 16:30:49] 2026-01-10 15:29:53,075 | INFO     | ready for new job
[2026-01-10 16:30:49] 2026-01-10 15:29:53,075 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 16:30:49] 2026-01-10 15:29:53,076 | INFO     | ***************************************
[2026-01-10 16:30:49] 2026-01-10 15:29:53,076 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 16:30:49] 2026-01-10 15:29:53,076 | INFO     | ***************************************
[2026-01-10 16:30:49] 2026-01-10 15:29:53,076 | INFO     | 
[2026-01-10 16:30:49] 2026-01-10 15:29:53,076 | INFO     | pilot is running in a VM
[2026-01-10 16:30:49] 2026-01-10 15:29:53,076 | INFO     | architecture information:
[2026-01-10 16:30:49] 2026-01-10 15:29:53,077 | INFO     | executing command: cat /etc/os-release
[2026-01-10 16:30:49] 2026-01-10 15:29:53,083 | INFO     | cat /etc/os-release:
[2026-01-10 16:30:49] NAME="CentOS Linux"
[2026-01-10 16:30:49] VERSION="7 (Core)"
[2026-01-10 16:30:49] ID="centos"
[2026-01-10 16:30:49] ID_LIKE="rhel fedora"
[2026-01-10 16:30:49] VERSION_ID="7"
[2026-01-10 16:30:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 16:30:49] ANSI_COLOR="0;31"
[2026-01-10 16:30:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 16:30:49] HOME_URL="https://www.centos.org/"
[2026-01-10 16:30:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 16:30:49] 
[2026-01-10 16:30:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 16:30:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 16:30:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 16:30:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 16:30:49] 
[2026-01-10 16:30:49] 2026-01-10 15:29:53,084 | INFO     | ***************************************
[2026-01-10 16:30:49] 2026-01-10 15:29:53,587 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-10 16:30:49] 2026-01-10 15:29:53,594 | INFO     | sufficient remaining disk space (38080086016 B)
[2026-01-10 16:30:49] 2026-01-10 15:29:53,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 16:30:49] 2026-01-10 15:29:53,594 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 16:30:49] 2026-01-10 15:29:53,594 | INFO     | update_server=False
[2026-01-10 16:30:49] 2026-01-10 15:29:53,595 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 16:30:49] 2026-01-10 15:29:53,595 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:30:49] 2026-01-10 15:29:53,655 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 16:30:49] 2026-01-10 15:29:53,780 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 16:30:49] 2026-01-10 15:29:53,871 | INFO     | all data control threads have been joined
[2026-01-10 16:30:49] 2026-01-10 15:29:53,945 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:30:49] 2026-01-10 15:29:53,945 | INFO     | aborting loop
[2026-01-10 16:30:49] 2026-01-10 15:29:53,967 | INFO     | all job control threads have been joined
[2026-01-10 16:30:49] 2026-01-10 15:29:54,059 | INFO     | all payload control threads have been joined
[2026-01-10 16:30:49] 2026-01-10 15:29:54,599 | INFO     | [job] queue monitor thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:29:54,600 | INFO     | [job] retrieve thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:29:54,876 | INFO     | [data] control thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:29:54,951 | INFO     | [job] job monitor thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:29:54,972 | INFO     | [job] control thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:29:55,023 | INFO     | [payload] validate_post thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:29:55,039 | INFO     | [data] copytool_in thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:29:55,065 | INFO     | [payload] control thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:29:55,303 | INFO     | [payload] failed_post thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:29:55,591 | INFO     | [job] validate thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:29:55,749 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:29:55,785 | INFO     | [data] copytool_out thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:29:55,830 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:29:55,885 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:29:57,661 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:30:04,598 | INFO     | job.realtimelogging is not enabled
[2026-01-10 16:30:49] 2026-01-10 15:30:05,604 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 16:30:49] 2026-01-10 15:30:24,059 | INFO     | PID=197088 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 16:30:49] 2026-01-10 15:30:24,060 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 16:30:49] 2026-01-10 15:30:24,060 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 16:30:49] 2026-01-10 15:30:24,060 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 16:30:49] 2026-01-10 15:30:43,533 | INFO     | [monitor] cgroup control has ended
[2026-01-10 16:30:49] 2026-01-10 15:30:44,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140712092170048)>', '<ExcThread(monitor, started 140711643047680)>']
[2026-01-10 16:30:49] 2026-01-10 15:30:45,165 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 16:30:49] 2026-01-10 15:30:45,165 | INFO     | [monitor] control thread has ended
[2026-01-10 16:30:49] 2026-01-10 15:30:49,615 | INFO     | all workflow threads have been joined
[2026-01-10 16:30:49] 2026-01-10 15:30:49,615 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 16:30:49] 2026-01-10 15:30:49,615 | INFO     | traces error code: 0
[2026-01-10 16:30:49] 2026-01-10 15:30:49,615 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 16:30:49] 2026-01-10 15:30:49,671 [wrapper] ==== pilot stdout END ====
[2026-01-10 16:30:49] 2026-01-10 15:30:49,673 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 16:30:49] 2026-01-10 15:30:49,675 [wrapper] pilotpid: 197088
[2026-01-10 16:30:49] 2026-01-10 15:30:49,676 [wrapper] Pilot exit status: 0
[2026-01-10 16:30:49] 2026-01-10 15:30:49,682 [wrapper] pandaids: 6962015559
[2026-01-10 16:30:49] 2026-01-10 15:30:49,694 [wrapper] cleanup supervisor_pilot  226862 197089
[2026-01-10 16:30:49] 2026-01-10 15:30:49,695 [wrapper] Test setup, not cleaning
[2026-01-10 16:30:49] 2026-01-10 15:30:49,697 [wrapper] apfmon messages muted
[2026-01-10 16:30:49] 2026-01-10 15:30:49,698 [wrapper] ==== wrapper stdout END ====
[2026-01-10 16:30:49] 2026-01-10 15:30:49,700 [wrapper] ==== wrapper stderr END ====
[2026-01-10 16:30:49]  *** Error codes and diagnostics ***
[2026-01-10 16:30:49]     "exeErrorCode": 0,
[2026-01-10 16:30:49]     "exeErrorDiag": "",
[2026-01-10 16:30:49]     "pilotErrorCode": 0,
[2026-01-10 16:30:49]     "pilotErrorDiag": "",
[2026-01-10 16:30:49]  *** Listing of results directory ***
[2026-01-10 16:30:49] total 440532
[2026-01-10 16:30:49] -rw-r--r--. 1 boinc boinc    579449 Jan  7 16:25 pilot3.tar.gz
[2026-01-10 16:30:49] -rwx------. 1 boinc boinc     36322 Jan  7 16:31 runpilot2-wrapper.sh
[2026-01-10 16:30:49] -rw-r--r--. 1 boinc boinc      5112 Jan  7 16:31 queuedata.json
[2026-01-10 16:30:49] -rw-r--r--. 1 boinc boinc       100 Jan 10 12:16 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 16:30:49] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 12:16 run_atlas
[2026-01-10 16:30:49] -rw-r--r--. 1 boinc boinc       105 Jan 10 12:16 job.xml
[2026-01-10 16:30:49] -rw-r--r--. 2 boinc boinc 223983311 Jan 10 12:16 EVNT.47898824._000370.pool.root.1
[2026-01-10 16:30:49] -rw-r--r--. 2 boinc boinc     15847 Jan 10 12:16 start_atlas.sh
[2026-01-10 16:30:49] drwxrwx--x. 2 boinc boinc        68 Jan 10 12:16 shared
[2026-01-10 16:30:49] -rw-r--r--. 2 boinc boinc    592391 Jan 10 12:16 input.tar.gz
[2026-01-10 16:30:49] -rw-r--r--. 1 boinc boinc      6571 Jan 10 12:16 init_data.xml
[2026-01-10 16:30:49] -rw-r--r--. 1 boinc boinc         0 Jan 10 12:16 boinc_setup_complete
[2026-01-10 16:30:49] -rw-r--r--. 1 boinc boinc         0 Jan 10 12:16 boinc_lockfile
[2026-01-10 16:30:49] -rw-r--r--. 1 boinc boinc      2516 Jan 10 12:16 pandaJob.out
[2026-01-10 16:30:49] -rw-------. 1 boinc boinc    989564 Jan 10 12:16 agis_schedconf.cvmfs.json
[2026-01-10 16:30:49] drwx------. 5 boinc boinc      4096 Jan 10 12:16 pilot3
[2026-01-10 16:30:49] -rw-------. 1 boinc boinc 218132698 Jan 10 16:29 HITS.47898826._008826.pool.root.1
[2026-01-10 16:30:49] -rw-------. 1 boinc boinc        95 Jan 10 16:29 pilot_heartbeat.json
[2026-01-10 16:30:49] -rw-------. 1 boinc boinc       981 Jan 10 16:29 memory_monitor_summary.json
[2026-01-10 16:30:49] -rw-r--r--. 1 boinc boinc       530 Jan 10 16:29 boinc_task_state.xml
[2026-01-10 16:30:49] -rw-------. 1 boinc boinc   1516240 Jan 10 16:29 agis_ddmendpoints.agis.ALL.json
[2026-01-10 16:30:49] -rw-------. 1 boinc boinc    401523 Jan 10 16:29 log.47898826._008826.job.log.tgz.1
[2026-01-10 16:30:49] -rw-------. 1 boinc boinc      7685 Jan 10 16:29 heartbeat.json
[2026-01-10 16:30:49] -rw-r--r--. 1 boinc boinc      8192 Jan 10 16:30 boinc_mmap_file
[2026-01-10 16:30:49] -rw-r--r--. 1 boinc boinc        28 Jan 10 16:30 wrapper_checkpoint.txt
[2026-01-10 16:30:49] -rw-------. 1 boinc boinc      4881 Jan 10 16:30 pilotlog.txt
[2026-01-10 16:30:49] -rw-------. 1 boinc boinc   2139856 Jan 10 16:30 log.47898826._008826.job.log.1
[2026-01-10 16:30:49] -rw-------. 1 boinc boinc       357 Jan 10 16:30 output.list
[2026-01-10 16:30:49] -rw-r--r--. 1 boinc boinc       620 Jan 10 16:30 runtime_log
[2026-01-10 16:30:49] -rw-------. 1 boinc boinc   2560000 Jan 10 16:30 result.tar.gz
[2026-01-10 16:30:49] -rw-r--r--. 1 boinc boinc      8799 Jan 10 16:30 runtime_log.err
[2026-01-10 16:30:49] -rw-------. 1 boinc boinc       653 Jan 10 16:30 2GAMDmfgkx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7BdKDmIHF7bn.diag
[2026-01-10 16:30:49] -rw-r--r--. 1 boinc boinc     21123 Jan 10 16:30 stderr.txt
[2026-01-10 16:30:49] HITS file was successfully produced:
[2026-01-10 16:30:49] -rw-------. 1 boinc boinc 218132698 Jan 10 16:29 shared/HITS.pool.root.1
[2026-01-10 16:30:49]  *** Contents of shared directory: ***
[2026-01-10 16:30:49] total 434856
[2026-01-10 16:30:49] -rw-r--r--. 2 boinc boinc 223983311 Jan 10 12:16 ATLAS.root_0
[2026-01-10 16:30:49] -rw-r--r--. 2 boinc boinc     15847 Jan 10 12:16 start_atlas.sh
[2026-01-10 16:30:49] -rw-r--r--. 2 boinc boinc    592391 Jan 10 12:16 input.tar.gz
[2026-01-10 16:30:49] -rw-------. 1 boinc boinc 218132698 Jan 10 16:29 HITS.pool.root.1
[2026-01-10 16:30:49] -rw-------. 1 boinc boinc   2560000 Jan 10 16:30 result.tar.gz
16:30:51 (193402): run_atlas exited; CPU time 44465.233353
16:30:51 (193402): called boinc_finish(0)

</stderr_txt>
]]>

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