Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:18:26 (7943): wrapper (7.7.26015): starting
07:18:26 (7943): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 07:18:26] Arguments: --nthreads 8
[2026-01-10 07:18:26] Threads: 8
[2026-01-10 07:18:26] Checking for CVMFS
[2026-01-10 07:18:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 07:18:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 07:18:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 07:18:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 07:18:30] 2.11.2.0 898 36468 122876 154970 3 60 19850189 25165825 899 130560 0 15122240 99.814 13099750 3790 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 07:18:30] CVMFS is ok
[2026-01-10 07:18:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 07:18:30] Checking for apptainer binary...
[2026-01-10 07:18:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 07:18:30] Running /usr/bin/apptainer --version
[2026-01-10 07:18:30] apptainer version 1.3.2-1.el7
[2026-01-10 07:18:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 07:18:52] cg-vwn390.simple-grid.lan
[2026-01-10 07:18:52] apptainer works
[2026-01-10 07:18:52] Set ATHENA_PROC_NUMBER=8
[2026-01-10 07:18:52] Set ATHENA_CORE_NUMBER=8
[2026-01-10 07:18:52] Starting ATLAS job with PandaID=6963189564
[2026-01-10 07:18:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 13:33:59]  *** The last 200 lines of the pilot log: ***
[2026-01-10 13:33:59] 2026-01-10 12:33:10,343 | INFO     | time since job start (22199s) is within the limit (349056.0s)
[2026-01-10 13:33:59] 2026-01-10 12:33:10,698 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 13:33:59] 2026-01-10 12:33:10,699 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 13:33:59] 2026-01-10 12:33:10,701 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6963189564/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 13:33:59] 2026-01-10 12:33:10,702 | INFO     | extracted standard info from prmon json
[2026-01-10 13:33:59] 2026-01-10 12:33:10,702 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 13:33:59] 2026-01-10 12:33:10,702 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 13:33:59] 2026-01-10 12:33:10,702 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 13:33:59] 2026-01-10 12:33:10,703 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 13:33:59] 2026-01-10 12:33:10,710 | INFO     | fitting pss+swap vs Time
[2026-01-10 13:33:59] 2026-01-10 12:33:10,711 | INFO     | sum of square deviations: 13755764892.5
[2026-01-10 13:33:59] 2026-01-10 12:33:10,722 | INFO     | sum of deviations: 163573579703.49997
[2026-01-10 13:33:59] 2026-01-10 12:33:10,731 | INFO     | mean x: 1768037476.5
[2026-01-10 13:33:59] 2026-01-10 12:33:10,731 | INFO     | mean y: 2454889.6242937855
[2026-01-10 13:33:59] 2026-01-10 12:33:10,731 | INFO     | intersect: -21021764507.92657
[2026-01-10 13:33:59] 2026-01-10 12:33:10,731 | INFO     | chi2: 7.694743448617206
[2026-01-10 13:33:59] 2026-01-10 12:33:10,732 | INFO     | sum of square deviations: 13181084350.0
[2026-01-10 13:33:59] 2026-01-10 12:33:10,736 | INFO     | sum of deviations: 184543798675.00003
[2026-01-10 13:33:59] 2026-01-10 12:33:10,736 | INFO     | mean x: 1768037324.0
[2026-01-10 13:33:59] 2026-01-10 12:33:10,737 | INFO     | mean y: 2460382.962750716
[2026-01-10 13:33:59] 2026-01-10 12:33:10,737 | INFO     | intersect: -24751218093.432236
[2026-01-10 13:33:59] 2026-01-10 12:33:10,737 | INFO     | chi2: 6.971144914371448
[2026-01-10 13:33:59] 2026-01-10 12:33:10,737 | INFO     | current chi2=6.971144914371448 (change=9.40380324669296 %)
[2026-01-10 13:33:59] 2026-01-10 12:33:10,738 | INFO     | right removable region: 348
[2026-01-10 13:33:59] 2026-01-10 12:33:10,738 | INFO     | sum of square deviations: 13181084350.0
[2026-01-10 13:33:59] 2026-01-10 12:33:10,742 | INFO     | sum of deviations: 39755592586.0
[2026-01-10 13:33:59] 2026-01-10 12:33:10,742 | INFO     | mean x: 1768037629.0
[2026-01-10 13:33:59] 2026-01-10 12:33:10,742 | INFO     | mean y: 2487731.1031518625
[2026-01-10 13:33:59] 2026-01-10 12:33:10,743 | INFO     | intersect: -5330107204.854557
[2026-01-10 13:33:59] 2026-01-10 12:33:10,743 | INFO     | chi2: 2.9246744201338633
[2026-01-10 13:33:59] 2026-01-10 12:33:10,752 | INFO     | current chi2=2.9246744201338633 (change=61.99126793942109 %)
[2026-01-10 13:33:59] 2026-01-10 12:33:10,752 | INFO     | sum of square deviations: 12622636670.0
[2026-01-10 13:33:59] 2026-01-10 12:33:10,756 | INFO     | sum of deviations: -37297153933.0
[2026-01-10 13:33:59] 2026-01-10 12:33:10,756 | INFO     | mean x: 1768037781.5
[2026-01-10 13:33:59] 2026-01-10 12:33:10,757 | INFO     | mean y: 2508717.465116279
[2026-01-10 13:33:59] 2026-01-10 12:33:10,757 | INFO     | intersect: 5226676933.658043
[2026-01-10 13:33:59] 2026-01-10 12:33:10,757 | INFO     | chi2: 0.970194526259428
[2026-01-10 13:33:59] 2026-01-10 12:33:10,758 | INFO     | current chi2=0.970194526259428 (change=66.82726393131233 %)
[2026-01-10 13:33:59] 2026-01-10 12:33:10,758 | INFO     | sum of square deviations: 12080189290.0
[2026-01-10 13:33:59] 2026-01-10 12:33:10,762 | INFO     | sum of deviations: -45901047041.0
[2026-01-10 13:33:59] 2026-01-10 12:33:10,762 | INFO     | mean x: 1768037934.0
[2026-01-10 13:33:59] 2026-01-10 12:33:10,762 | INFO     | mean y: 2511125.474926254
[2026-01-10 13:33:59] 2026-01-10 12:33:10,762 | INFO     | intersect: 6720517808.200213
[2026-01-10 13:33:59] 2026-01-10 12:33:10,763 | INFO     | chi2: 0.933308565252297
[2026-01-10 13:33:59] 2026-01-10 12:33:10,763 | INFO     | current chi2=0.933308565252297 (change=3.8019139470250742 %)
[2026-01-10 13:33:59] 2026-01-10 12:33:10,763 | INFO     | left removable region: 30
[2026-01-10 13:33:59] 2026-01-10 12:33:10,764 | INFO     | sum of square deviations: 9971385099.5
[2026-01-10 13:33:59] 2026-01-10 12:33:10,767 | INFO     | sum of deviations: 5573069678.0
[2026-01-10 13:33:59] 2026-01-10 12:33:10,767 | INFO     | mean x: 1768038208.5
[2026-01-10 13:33:59] 2026-01-10 12:33:10,768 | INFO     | mean y: 2508846.522012579
[2026-01-10 13:33:59] 2026-01-10 12:33:10,768 | INFO     | intersect: -985658798.2950426
[2026-01-10 13:33:59] 2026-01-10 12:33:10,776 | INFO     | chi2: 0.05879340012178185
[2026-01-10 13:33:59] 2026-01-10 12:33:10,777 | INFO     | current memory leak: 0.56 B/s (using 318 data points, chi2=0.06)
[2026-01-10 13:33:59] 2026-01-10 12:33:10,778 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-10 13:33:59] 2026-01-10 12:33:10,778 | INFO     | ..............................
[2026-01-10 13:33:59] 2026-01-10 12:33:10,778 | INFO     | . Timing measurements:
[2026-01-10 13:33:59] 2026-01-10 12:33:10,778 | INFO     | . get job = 0 s
[2026-01-10 13:33:59] 2026-01-10 12:33:10,778 | INFO     | . initial setup = 11 s
[2026-01-10 13:33:59] 2026-01-10 12:33:10,778 | INFO     | . payload setup = 146 s
[2026-01-10 13:33:59] 2026-01-10 12:33:10,778 | INFO     | . stage-in = 0 s
[2026-01-10 13:33:59] 2026-01-10 12:33:10,779 | INFO     | . payload execution = 21743 s
[2026-01-10 13:33:59] 2026-01-10 12:33:10,779 | INFO     | . stage-out = 4 s
[2026-01-10 13:33:59] 2026-01-10 12:33:10,779 | INFO     | . log creation = 1 s
[2026-01-10 13:33:59] 2026-01-10 12:33:10,779 | INFO     | ..............................
[2026-01-10 13:33:59] 2026-01-10 12:33:11,055 | INFO     | 
[2026-01-10 13:33:59] 2026-01-10 12:33:11,056 | INFO     | job summary report
[2026-01-10 13:33:59] 2026-01-10 12:33:11,056 | INFO     | --------------------------------------------------
[2026-01-10 13:33:59] 2026-01-10 12:33:11,056 | INFO     | PanDA job id: 6963189564
[2026-01-10 13:33:59] 2026-01-10 12:33:11,056 | INFO     | task id: 47898826
[2026-01-10 13:33:59] 2026-01-10 12:33:11,056 | INFO     | errors: (none)
[2026-01-10 13:33:59] 2026-01-10 12:33:11,056 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 13:33:59] 2026-01-10 12:33:11,056 | INFO     | pilot state: finished 
[2026-01-10 13:33:59] 2026-01-10 12:33:11,056 | INFO     | transexitcode: 0
[2026-01-10 13:33:59] 2026-01-10 12:33:11,057 | INFO     | exeerrorcode: 0
[2026-01-10 13:33:59] 2026-01-10 12:33:11,057 | INFO     | exeerrordiag: 
[2026-01-10 13:33:59] 2026-01-10 12:33:11,057 | INFO     | exitcode: 0
[2026-01-10 13:33:59] 2026-01-10 12:33:11,057 | INFO     | exitmsg: OK
[2026-01-10 13:33:59] 2026-01-10 12:33:11,057 | INFO     | cpuconsumptiontime: 81670 s
[2026-01-10 13:33:59] 2026-01-10 12:33:11,057 | INFO     | nevents: 400
[2026-01-10 13:33:59] 2026-01-10 12:33:11,057 | INFO     | neventsw: 0
[2026-01-10 13:33:59] 2026-01-10 12:33:11,057 | INFO     | pid: 18168
[2026-01-10 13:33:59] 2026-01-10 12:33:11,057 | INFO     | pgrp: 18168
[2026-01-10 13:33:59] 2026-01-10 12:33:11,058 | INFO     | corecount: 8
[2026-01-10 13:33:59] 2026-01-10 12:33:11,058 | INFO     | event service: False
[2026-01-10 13:33:59] 2026-01-10 12:33:11,058 | INFO     | sizes: {0: 2283143, 1: 2283999, 2: 2284027, 12: 2284027, 23: 2284055, 34: 2284083, 45: 2284239, 55: 2284267, 66: 2284295, 77: 2284323, 88: 2284379, 96: 2284949, 98
[2026-01-10 13:33:59] 2026-01-10 12:33:11,058 | INFO     | --------------------------------------------------
[2026-01-10 13:33:59] 2026-01-10 12:33:11,058 | INFO     | 
[2026-01-10 13:33:59] 2026-01-10 12:33:11,058 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-10 13:33:59] 2026-01-10 12:33:11,338 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,338 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,338 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,339 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,339 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,339 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,339 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,339 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,339 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,339 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,339 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,339 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,340 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,340 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,340 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,340 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,340 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,340 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 13:33:59] 2026-01-10 12:33:11,340 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,340 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 13:33:59] 2026-01-10 12:33:11,341 | INFO     | job 6963189564 has completed (purged errors)
[2026-01-10 13:33:59] 2026-01-10 12:33:11,341 | INFO     | overall cleanup function is called
[2026-01-10 13:33:59] 2026-01-10 12:33:12,349 | INFO     | --- collectZombieJob: --- 10, [18168]
[2026-01-10 13:33:59] 2026-01-10 12:33:12,350 | INFO     | zombie collector waiting for pid 18168
[2026-01-10 13:33:59] 2026-01-10 12:33:12,350 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 13:33:59] 2026-01-10 12:33:12,350 | INFO     | collected zombie processes
[2026-01-10 13:33:59] 2026-01-10 12:33:12,350 | INFO     | will attempt to kill all subprocesses of pid=18168
[2026-01-10 13:33:59] 2026-01-10 12:33:12,437 | INFO     | process IDs to be killed: [18168] (in reverse order)
[2026-01-10 13:33:59] 2026-01-10 12:33:13,530 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 13:33:59] 2026-01-10 12:33:13,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 13:33:59] 2026-01-10 12:33:13,533 | INFO     | did not find any defunct processes belonging to 18168
[2026-01-10 13:33:59] 2026-01-10 12:33:13,534 | INFO     | did not find any defunct processes belonging to 18168
[2026-01-10 13:33:59] 2026-01-10 12:33:13,534 | INFO     | ready for new job
[2026-01-10 13:33:59] 2026-01-10 12:33:13,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 13:33:59] 2026-01-10 12:33:13,537 | INFO     | ***************************************
[2026-01-10 13:33:59] 2026-01-10 12:33:13,537 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 13:33:59] 2026-01-10 12:33:13,537 | INFO     | ***************************************
[2026-01-10 13:33:59] 2026-01-10 12:33:13,537 | INFO     | 
[2026-01-10 13:33:59] 2026-01-10 12:33:13,538 | INFO     | pilot is running in a VM
[2026-01-10 13:33:59] 2026-01-10 12:33:13,538 | INFO     | architecture information:
[2026-01-10 13:33:59] 2026-01-10 12:33:13,555 | INFO     | executing command: cat /etc/os-release
[2026-01-10 13:33:59] 2026-01-10 12:33:13,803 | INFO     | cat /etc/os-release:
[2026-01-10 13:33:59] NAME="CentOS Linux"
[2026-01-10 13:33:59] VERSION="7 (Core)"
[2026-01-10 13:33:59] ID="centos"
[2026-01-10 13:33:59] ID_LIKE="rhel fedora"
[2026-01-10 13:33:59] VERSION_ID="7"
[2026-01-10 13:33:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 13:33:59] ANSI_COLOR="0;31"
[2026-01-10 13:33:59] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 13:33:59] HOME_URL="https://www.centos.org/"
[2026-01-10 13:33:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 13:33:59] 
[2026-01-10 13:33:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 13:33:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 13:33:59] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 13:33:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 13:33:59] 
[2026-01-10 13:33:59] 2026-01-10 12:33:13,803 | INFO     | ***************************************
[2026-01-10 13:33:59] 2026-01-10 12:33:14,307 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-10 13:33:59] 2026-01-10 12:33:14,556 | INFO     | sufficient remaining disk space (496472424448 B)
[2026-01-10 13:33:59] 2026-01-10 12:33:14,557 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 13:33:59] 2026-01-10 12:33:14,557 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 13:33:59] 2026-01-10 12:33:14,557 | INFO     | update_server=False
[2026-01-10 13:33:59] 2026-01-10 12:33:14,557 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 13:33:59] 2026-01-10 12:33:14,966 | INFO     | all payload control threads have been joined
[2026-01-10 13:33:59] 2026-01-10 12:33:15,041 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 13:33:59] 2026-01-10 12:33:15,201 | INFO     | all job control threads have been joined
[2026-01-10 13:33:59] 2026-01-10 12:33:15,524 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:33:59] 2026-01-10 12:33:15,525 | INFO     | aborting loop
[2026-01-10 13:33:59] 2026-01-10 12:33:15,564 | INFO     | [job] retrieve thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:15,568 | INFO     | all data control threads have been joined
[2026-01-10 13:33:59] 2026-01-10 12:33:15,819 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:15,855 | INFO     | [data] copytool_in thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:15,924 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:33:59] 2026-01-10 12:33:15,973 | INFO     | [payload] control thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:16,197 | INFO     | [payload] failed_post thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:16,208 | INFO     | [job] control thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:16,509 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:16,531 | INFO     | [job] job monitor thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:16,574 | INFO     | [data] control thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:16,585 | INFO     | [job] validate thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:16,590 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:16,734 | INFO     | [payload] validate_post thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:16,933 | INFO     | [job] queue monitor thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:16,947 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:17,048 | INFO     | [data] copytool_out thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:18,057 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 13:33:59] 2026-01-10 12:33:22,066 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 13:33:59] 2026-01-10 12:33:43,505 | INFO     | PID=11694 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 13:33:59] 2026-01-10 12:33:43,505 | INFO     | .. there are 2 such processes running
[2026-01-10 13:33:59] 2026-01-10 12:33:43,506 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 13:33:59] 2026-01-10 12:33:43,506 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 13:33:59] 2026-01-10 12:33:43,506 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 13:33:59] 2026-01-10 12:33:48,937 | INFO     | [monitor] cgroup control has ended
[2026-01-10 13:33:59] 2026-01-10 12:33:50,160 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140384595507008)>', '<ExcThread(monitor, started 140384025966336)>']
[2026-01-10 13:33:59] 2026-01-10 12:33:50,548 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 13:33:59] 2026-01-10 12:33:50,549 | INFO     | [monitor] control thread has ended
[2026-01-10 13:33:59] 2026-01-10 12:33:55,186 | INFO     | all workflow threads have been joined
[2026-01-10 13:33:59] 2026-01-10 12:33:55,187 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 13:33:59] 2026-01-10 12:33:55,187 | INFO     | traces error code: 0
[2026-01-10 13:33:59] 2026-01-10 12:33:55,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 13:33:59] 2026-01-10 12:33:55,731 [wrapper] ==== pilot stdout END ====
[2026-01-10 13:33:59] 2026-01-10 12:33:55,846 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 13:33:59] 2026-01-10 12:33:55,929 [wrapper] pilotpid: 11694
[2026-01-10 13:33:59] 2026-01-10 12:33:56,032 [wrapper] Pilot exit status: 0
[2026-01-10 13:33:59] 2026-01-10 12:33:56,579 [wrapper] pandaids: 6963189564
[2026-01-10 13:33:59] 2026-01-10 12:33:57,196 [wrapper] cleanup supervisor_pilot 17374 11695
[2026-01-10 13:33:59] 2026-01-10 12:33:57,282 [wrapper] Test setup, not cleaning
[2026-01-10 13:33:59] 2026-01-10 12:33:57,380 [wrapper] apfmon messages muted
[2026-01-10 13:33:59] 2026-01-10 12:33:57,460 [wrapper] ==== wrapper stdout END ====
[2026-01-10 13:33:59] 2026-01-10 12:33:57,558 [wrapper] ==== wrapper stderr END ====
[2026-01-10 13:33:59]  *** Error codes and diagnostics ***
[2026-01-10 13:33:59]     "exeErrorCode": 0,
[2026-01-10 13:33:59]     "exeErrorDiag": "",
[2026-01-10 13:33:59]     "pilotErrorCode": 0,
[2026-01-10 13:33:59]     "pilotErrorDiag": "",
[2026-01-10 13:33:59]  *** Listing of results directory ***
[2026-01-10 13:33:59] total 446224
[2026-01-10 13:33:59] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 13:33:59] -rwx------. 1 boinc boinc     36322 Jan  9 05:25 runpilot2-wrapper.sh
[2026-01-10 13:33:59] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:30 queuedata.json
[2026-01-10 13:33:59] -rw-r--r--. 1 boinc boinc       100 Jan 10 07:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 13:33:59] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 07:18 run_atlas
[2026-01-10 13:33:59] -rw-r--r--. 1 boinc boinc       105 Jan 10 07:18 job.xml
[2026-01-10 13:33:59] -rw-r--r--. 1 boinc boinc      6391 Jan 10 07:18 init_data.xml
[2026-01-10 13:33:59] -rw-r--r--. 2 boinc boinc 222437430 Jan 10 07:18 EVNT.47898824._001476.pool.root.1
[2026-01-10 13:33:59] -rw-r--r--. 2 boinc boinc     15847 Jan 10 07:18 start_atlas.sh
[2026-01-10 13:33:59] drwxrwx--x. 2 boinc boinc        68 Jan 10 07:18 shared
[2026-01-10 13:33:59] -rw-r--r--. 2 boinc boinc    592401 Jan 10 07:18 input.tar.gz
[2026-01-10 13:33:59] -rw-r--r--. 1 boinc boinc         0 Jan 10 07:18 boinc_lockfile
[2026-01-10 13:33:59] -rw-r--r--. 1 boinc boinc      2520 Jan 10 07:18 pandaJob.out
[2026-01-10 13:33:59] -rw-------. 1 boinc boinc    989374 Jan 10 07:23 agis_schedconf.cvmfs.json
[2026-01-10 13:33:59] drwx------. 5 boinc boinc      4096 Jan 10 07:23 pilot3
[2026-01-10 13:33:59] -rw-------. 1 boinc boinc 223604622 Jan 10 13:29 HITS.47898826._038433.pool.root.1
[2026-01-10 13:33:59] -rw-r--r--. 1 boinc boinc       531 Jan 10 13:30 boinc_task_state.xml
[2026-01-10 13:33:59] -rw-------. 1 boinc boinc      1012 Jan 10 13:31 memory_monitor_summary.json
[2026-01-10 13:33:59] -rw-------. 1 boinc boinc   1516240 Jan 10 13:31 agis_ddmendpoints.agis.ALL.json
[2026-01-10 13:33:59] -rw-------. 1 boinc boinc    555344 Jan 10 13:31 log.47898826._038433.job.log.tgz.1
[2026-01-10 13:33:59] -rw-------. 1 boinc boinc      7776 Jan 10 13:33 heartbeat.json
[2026-01-10 13:33:59] -rw-r--r--. 1 boinc boinc      8192 Jan 10 13:33 boinc_mmap_file
[2026-01-10 13:33:59] -rw-r--r--. 1 boinc boinc        28 Jan 10 13:33 wrapper_checkpoint.txt
[2026-01-10 13:33:59] -rw-------. 1 boinc boinc        95 Jan 10 13:33 pilot_heartbeat.json
[2026-01-10 13:33:59] -rw-------. 1 boinc boinc      4884 Jan 10 13:33 pilotlog.txt
[2026-01-10 13:33:59] -rw-------. 1 boinc boinc   2941923 Jan 10 13:33 log.47898826._038433.job.log.1
[2026-01-10 13:33:59] -rw-------. 1 boinc boinc       357 Jan 10 13:33 output.list
[2026-01-10 13:33:59] -rw-r--r--. 1 boinc boinc       620 Jan 10 13:33 runtime_log
[2026-01-10 13:33:59] -rw-------. 1 boinc boinc   3512320 Jan 10 13:33 result.tar.gz
[2026-01-10 13:33:59] -rw-r--r--. 1 boinc boinc      8817 Jan 10 13:33 runtime_log.err
[2026-01-10 13:33:59] -rw-------. 1 boinc boinc       657 Jan 10 13:33 8NcLDmMFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjMmKDmApmqXo.diag
[2026-01-10 13:33:59] -rw-r--r--. 1 boinc boinc     20759 Jan 10 13:33 stderr.txt
[2026-01-10 13:33:59] HITS file was successfully produced:
[2026-01-10 13:33:59] -rw-------. 1 boinc boinc 223604622 Jan 10 13:29 shared/HITS.pool.root.1
[2026-01-10 13:33:59]  *** Contents of shared directory: ***
[2026-01-10 13:33:59] total 439620
[2026-01-10 13:33:59] -rw-r--r--. 2 boinc boinc 222437430 Jan 10 07:18 ATLAS.root_0
[2026-01-10 13:33:59] -rw-r--r--. 2 boinc boinc     15847 Jan 10 07:18 start_atlas.sh
[2026-01-10 13:33:59] -rw-r--r--. 2 boinc boinc    592401 Jan 10 07:18 input.tar.gz
[2026-01-10 13:33:59] -rw-------. 1 boinc boinc 223604622 Jan 10 13:29 HITS.pool.root.1
[2026-01-10 13:33:59] -rw-------. 1 boinc boinc   3512320 Jan 10 13:33 result.tar.gz
13:34:01 (7943): run_atlas exited; CPU time 81888.279604
13:34:01 (7943): called boinc_finish(0)

</stderr_txt>
]]>

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