Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:02:19 (20300): wrapper (7.7.26015): starting
07:02:19 (20300): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 07:02:19] Arguments: --nthreads 8
[2026-01-10 07:02:19] Threads: 8
[2026-01-10 07:02:19] Checking for CVMFS
[2026-01-10 07:02:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 07:02:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 07:02:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 07:02:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 07:02:22] 2.11.2.0 20999 36468 120668 154969 3 100 15897660 25165824 1088 130560 0 15851125 99.788 10799086 3215 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 07:02:22] CVMFS is ok
[2026-01-10 07:02:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 07:02:22] Checking for apptainer binary...
[2026-01-10 07:02:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 07:02:22] Running /usr/bin/apptainer --version
[2026-01-10 07:02:22] apptainer version 1.3.2-1.el7
[2026-01-10 07:02:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 07:02:46] cg-vwn368.simple-grid.lan
[2026-01-10 07:02:46] apptainer works
[2026-01-10 07:02:46] Set ATHENA_PROC_NUMBER=8
[2026-01-10 07:02:46] Set ATHENA_CORE_NUMBER=8
[2026-01-10 07:02:46] Starting ATLAS job with PandaID=6963192121
[2026-01-10 07:02:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 12:10:03]  *** The last 200 lines of the pilot log: ***
[2026-01-10 12:10:03] 2026-01-10 11:08:48,192 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963192121/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 12:10:03] 2026-01-10 11:08:48,193 | INFO     | extracted standard info from prmon json
[2026-01-10 12:10:03] 2026-01-10 11:08:48,193 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 12:10:03] 2026-01-10 11:08:48,193 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 12:10:03] 2026-01-10 11:08:48,193 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 12:10:03] 2026-01-10 11:08:48,194 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 12:10:03] 2026-01-10 11:08:48,200 | INFO     | fitting pss+swap vs Time
[2026-01-10 12:10:03] 2026-01-10 11:08:48,201 | INFO     | sum of square deviations: 7253894147.5
[2026-01-10 12:10:03] 2026-01-10 11:08:48,210 | INFO     | sum of deviations: 86241717528.0
[2026-01-10 12:10:03] 2026-01-10 11:08:48,210 | INFO     | mean x: 1768034481.5
[2026-01-10 12:10:03] 2026-01-10 11:08:48,210 | INFO     | mean y: 2459032.979020979
[2026-01-10 12:10:03] 2026-01-10 11:08:48,210 | INFO     | intersect: -21017744354.719635
[2026-01-10 12:10:03] 2026-01-10 11:08:48,211 | INFO     | chi2: 7.61048823447054
[2026-01-10 12:10:03] 2026-01-10 11:08:48,211 | INFO     | sum of square deviations: 6880054580.0
[2026-01-10 12:10:03] 2026-01-10 11:08:48,214 | INFO     | sum of deviations: 103735035106.00002
[2026-01-10 12:10:03] 2026-01-10 11:08:48,218 | INFO     | mean x: 1768034329.0
[2026-01-10 12:10:03] 2026-01-10 11:08:48,219 | INFO     | mean y: 2466059.619217082
[2026-01-10 12:10:03] 2026-01-10 11:08:48,219 | INFO     | intersect: -26655331644.571114
[2026-01-10 12:10:03] 2026-01-10 11:08:48,219 | INFO     | chi2: 6.899964548645723
[2026-01-10 12:10:03] 2026-01-10 11:08:48,220 | INFO     | current chi2=6.899964548645723 (change=9.336111743877463 %)
[2026-01-10 12:10:03] 2026-01-10 11:08:48,220 | INFO     | right removable region: 280
[2026-01-10 12:10:03] 2026-01-10 11:08:48,220 | INFO     | sum of square deviations: 6880054580.0
[2026-01-10 12:10:03] 2026-01-10 11:08:48,223 | INFO     | sum of deviations: -13243075843.999996
[2026-01-10 12:10:03] 2026-01-10 11:08:48,223 | INFO     | mean x: 1768034634.0
[2026-01-10 12:10:03] 2026-01-10 11:08:48,223 | INFO     | mean y: 2499588.3879003557
[2026-01-10 12:10:03] 2026-01-10 11:08:48,224 | INFO     | intersect: 3405701769.507919
[2026-01-10 12:10:03] 2026-01-10 11:08:48,224 | INFO     | chi2: 2.803519545876034
[2026-01-10 12:10:03] 2026-01-10 11:08:48,224 | INFO     | current chi2=2.803519545876034 (change=63.16242191692878 %)
[2026-01-10 12:10:03] 2026-01-10 11:08:48,225 | INFO     | sum of square deviations: 6519285025.0
[2026-01-10 12:10:03] 2026-01-10 11:08:48,227 | INFO     | sum of deviations: -70841904242.5
[2026-01-10 12:10:03] 2026-01-10 11:08:48,228 | INFO     | mean x: 1768034786.5
[2026-01-10 12:10:03] 2026-01-10 11:08:48,228 | INFO     | mean y: 2523851.112318841
[2026-01-10 12:10:03] 2026-01-10 11:08:48,228 | INFO     | intersect: 19214899220.854946
[2026-01-10 12:10:03] 2026-01-10 11:08:48,228 | INFO     | chi2: 1.0639278041514082
[2026-01-10 12:10:03] 2026-01-10 11:08:48,229 | INFO     | current chi2=1.0639278041514082 (change=62.05028048702418 %)
[2026-01-10 12:10:03] 2026-01-10 11:08:48,229 | INFO     | sum of square deviations: 6171352920.0
[2026-01-10 12:10:03] 2026-01-10 11:08:48,232 | INFO     | sum of deviations: -77266599160.00002
[2026-01-10 12:10:03] 2026-01-10 11:08:48,232 | INFO     | mean x: 1768034939.0
[2026-01-10 12:10:03] 2026-01-10 11:08:48,232 | INFO     | mean y: 2526655.5682656826
[2026-01-10 12:10:03] 2026-01-10 11:08:48,232 | INFO     | intersect: 22138685242.426083
[2026-01-10 12:10:03] 2026-01-10 11:08:48,233 | INFO     | chi2: 1.01658532854883
[2026-01-10 12:10:03] 2026-01-10 11:08:48,233 | INFO     | current chi2=1.01658532854883 (change=4.449782721896125 %)
[2026-01-10 12:10:03] 2026-01-10 11:08:48,233 | INFO     | left removable region: 30
[2026-01-10 12:10:03] 2026-01-10 11:08:48,233 | INFO     | sum of square deviations: 4844974562.5
[2026-01-10 12:10:03] 2026-01-10 11:08:48,236 | INFO     | sum of deviations: -34493498071.5
[2026-01-10 12:10:03] 2026-01-10 11:08:48,236 | INFO     | mean x: 1768035213.5
[2026-01-10 12:10:03] 2026-01-10 11:08:48,236 | INFO     | mean y: 2523888.868
[2026-01-10 12:10:03] 2026-01-10 11:08:48,236 | INFO     | intersect: 12589941725.740562
[2026-01-10 12:10:03] 2026-01-10 11:08:48,237 | INFO     | chi2: 0.17810883504133182
[2026-01-10 12:10:03] 2026-01-10 11:08:48,237 | INFO     | current memory leak: -7.12 B/s (using 250 data points, chi2=0.18)
[2026-01-10 12:10:03] 2026-01-10 11:08:48,237 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-10 12:10:03] 2026-01-10 11:08:48,250 | INFO     | ..............................
[2026-01-10 12:10:03] 2026-01-10 11:08:48,250 | INFO     | . Timing measurements:
[2026-01-10 12:10:03] 2026-01-10 11:08:48,250 | INFO     | . get job = 0 s
[2026-01-10 12:10:03] 2026-01-10 11:08:48,250 | INFO     | . initial setup = 15 s
[2026-01-10 12:10:03] 2026-01-10 11:08:48,250 | INFO     | . payload setup = 146 s
[2026-01-10 12:10:03] 2026-01-10 11:08:48,250 | INFO     | . stage-in = 0 s
[2026-01-10 12:10:03] 2026-01-10 11:08:48,251 | INFO     | . payload execution = 17613 s
[2026-01-10 12:10:03] 2026-01-10 11:08:48,251 | INFO     | . stage-out = 3 s
[2026-01-10 12:10:03] 2026-01-10 11:08:48,251 | INFO     | . log creation = 1 s
[2026-01-10 12:10:03] 2026-01-10 11:08:48,251 | INFO     | ..............................
[2026-01-10 12:10:03] 2026-01-10 11:08:48,828 | INFO     | 
[2026-01-10 12:10:03] 2026-01-10 11:08:48,828 | INFO     | job summary report
[2026-01-10 12:10:03] 2026-01-10 11:08:48,828 | INFO     | --------------------------------------------------
[2026-01-10 12:10:03] 2026-01-10 11:08:48,828 | INFO     | PanDA job id: 6963192121
[2026-01-10 12:10:03] 2026-01-10 11:08:48,828 | INFO     | task id: 47898826
[2026-01-10 12:10:03] 2026-01-10 11:08:48,828 | INFO     | errors: (none)
[2026-01-10 12:10:03] 2026-01-10 11:08:48,829 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 12:10:03] 2026-01-10 11:08:48,829 | INFO     | pilot state: finished 
[2026-01-10 12:10:03] 2026-01-10 11:08:48,829 | INFO     | transexitcode: 0
[2026-01-10 12:10:03] 2026-01-10 11:08:48,829 | INFO     | exeerrorcode: 0
[2026-01-10 12:10:03] 2026-01-10 11:08:48,829 | INFO     | exeerrordiag: 
[2026-01-10 12:10:03] 2026-01-10 11:08:48,829 | INFO     | exitcode: 0
[2026-01-10 12:10:03] 2026-01-10 11:08:48,829 | INFO     | exitmsg: OK
[2026-01-10 12:10:03] 2026-01-10 11:08:48,829 | INFO     | cpuconsumptiontime: 77705 s
[2026-01-10 12:10:03] 2026-01-10 11:08:48,829 | INFO     | nevents: 400
[2026-01-10 12:10:03] 2026-01-10 11:08:48,829 | INFO     | neventsw: 0
[2026-01-10 12:10:03] 2026-01-10 11:08:48,829 | INFO     | pid: 30587
[2026-01-10 12:10:03] 2026-01-10 11:08:48,830 | INFO     | pgrp: 30587
[2026-01-10 12:10:03] 2026-01-10 11:08:48,830 | INFO     | corecount: 8
[2026-01-10 12:10:03] 2026-01-10 11:08:48,830 | INFO     | event service: False
[2026-01-10 12:10:03] 2026-01-10 11:08:48,830 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2283999, 23: 2284027, 34: 2284055, 44: 2284083, 55: 2284239, 66: 2284267, 76: 2284295, 87: 2284351, 98: 2284379, 99: 2284949, 1
[2026-01-10 12:10:03] 2026-01-10 11:08:48,830 | INFO     | --------------------------------------------------
[2026-01-10 12:10:03] 2026-01-10 11:08:48,830 | INFO     | 
[2026-01-10 12:10:03] 2026-01-10 11:08:48,830 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-10 12:10:03] 2026-01-10 11:08:49,340 | INFO     | time since job start (18090s) is within the limit (349056.0s)
[2026-01-10 12:10:03] 2026-01-10 11:08:49,426 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,426 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,427 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,427 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,427 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,427 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,427 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,427 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,428 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 12:10:03] 2026-01-10 11:08:49,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,428 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 12:10:03] 2026-01-10 11:08:49,429 | INFO     | job 6963192121 has completed (purged errors)
[2026-01-10 12:10:03] 2026-01-10 11:08:49,429 | INFO     | overall cleanup function is called
[2026-01-10 12:10:03] 2026-01-10 11:08:50,443 | INFO     | --- collectZombieJob: --- 10, [30587]
[2026-01-10 12:10:03] 2026-01-10 11:08:50,443 | INFO     | zombie collector waiting for pid 30587
[2026-01-10 12:10:03] 2026-01-10 11:08:50,443 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 12:10:03] 2026-01-10 11:08:50,443 | INFO     | collected zombie processes
[2026-01-10 12:10:03] 2026-01-10 11:08:50,443 | INFO     | will attempt to kill all subprocesses of pid=30587
[2026-01-10 12:10:03] 2026-01-10 11:08:50,518 | INFO     | process IDs to be killed: [30587] (in reverse order)
[2026-01-10 12:10:03] 2026-01-10 11:08:51,471 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 12:10:03] 2026-01-10 11:08:51,472 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 12:10:03] 2026-01-10 11:08:51,474 | INFO     | did not find any defunct processes belonging to 30587
[2026-01-10 12:10:03] 2026-01-10 11:08:51,476 | INFO     | did not find any defunct processes belonging to 30587
[2026-01-10 12:10:03] 2026-01-10 11:08:51,476 | INFO     | ready for new job
[2026-01-10 12:10:03] 2026-01-10 11:08:51,476 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 12:10:03] 2026-01-10 11:08:51,478 | INFO     | ***************************************
[2026-01-10 12:10:03] 2026-01-10 11:08:51,479 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 12:10:03] 2026-01-10 11:08:51,479 | INFO     | ***************************************
[2026-01-10 12:10:03] 2026-01-10 11:08:51,479 | INFO     | 
[2026-01-10 12:10:03] 2026-01-10 11:08:51,479 | INFO     | pilot is running in a VM
[2026-01-10 12:10:03] 2026-01-10 11:08:51,480 | INFO     | architecture information:
[2026-01-10 12:10:03] 2026-01-10 11:08:51,500 | INFO     | executing command: cat /etc/os-release
[2026-01-10 12:10:03] 2026-01-10 11:08:51,845 | INFO     | cat /etc/os-release:
[2026-01-10 12:10:03] NAME="CentOS Linux"
[2026-01-10 12:10:03] VERSION="7 (Core)"
[2026-01-10 12:10:03] ID="centos"
[2026-01-10 12:10:03] ID_LIKE="rhel fedora"
[2026-01-10 12:10:03] VERSION_ID="7"
[2026-01-10 12:10:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 12:10:03] ANSI_COLOR="0;31"
[2026-01-10 12:10:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 12:10:03] HOME_URL="https://www.centos.org/"
[2026-01-10 12:10:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 12:10:03] 
[2026-01-10 12:10:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 12:10:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 12:10:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 12:10:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 12:10:03] 
[2026-01-10 12:10:03] 2026-01-10 11:08:51,845 | INFO     | ***************************************
[2026-01-10 12:10:03] 2026-01-10 11:08:52,349 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-10 12:10:03] 2026-01-10 11:08:52,584 | INFO     | sufficient remaining disk space (497830330368 B)
[2026-01-10 12:10:03] 2026-01-10 11:08:52,584 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 12:10:03] 2026-01-10 11:08:52,584 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 12:10:03] 2026-01-10 11:08:52,584 | INFO     | update_server=False
[2026-01-10 12:10:03] 2026-01-10 11:08:52,584 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 12:10:03] 2026-01-10 11:08:52,586 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 12:10:03] 2026-01-10 11:08:52,652 | INFO     | all payload control threads have been joined
[2026-01-10 12:10:03] 2026-01-10 11:08:52,766 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 12:10:03] 2026-01-10 11:08:52,766 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 12:10:03] 2026-01-10 11:08:52,766 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:10:03] 2026-01-10 11:08:52,766 | INFO     | will abort loop
[2026-01-10 12:10:03] 2026-01-10 11:08:52,959 | INFO     | all data control threads have been joined
[2026-01-10 12:10:03] 2026-01-10 11:08:53,113 | INFO     | all job control threads have been joined
[2026-01-10 12:10:03] 2026-01-10 11:08:53,439 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:10:03] 2026-01-10 11:08:53,591 | INFO     | [job] retrieve thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:08:53,658 | INFO     | [payload] control thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:08:53,727 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 12:10:03] 2026-01-10 11:08:53,772 | INFO     | [job] job monitor thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:08:53,805 | INFO     | [payload] failed_post thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:08:53,934 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:08:53,965 | INFO     | [data] control thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:08:54,044 | INFO     | [data] copytool_in thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:08:54,119 | INFO     | [job] control thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:08:54,262 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:08:54,418 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:08:54,445 | INFO     | [job] queue monitor thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:08:54,529 | INFO     | [job] validate thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:08:54,794 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:08:55,004 | INFO     | [payload] validate_post thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:08:55,734 | INFO     | [data] copytool_out thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:08:56,595 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 12:10:03] 2026-01-10 11:09:22,487 | INFO     | PID=24083 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 12:10:03] 2026-01-10 11:09:22,487 | INFO     | .. there are 2 such processes running
[2026-01-10 12:10:03] 2026-01-10 11:09:22,488 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 12:10:03] 2026-01-10 11:09:22,488 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 12:10:03] 2026-01-10 11:09:22,488 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 12:10:03] 2026-01-10 11:09:50,515 | INFO     | [monitor] cgroup control has ended
[2026-01-10 12:10:03] 2026-01-10 11:09:52,509 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140412872742720)>', '<ExcThread(monitor, started 140412572378880)>']
[2026-01-10 12:10:03] 2026-01-10 11:09:52,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 12:10:03] 2026-01-10 11:09:52,666 | INFO     | [monitor] control thread has ended
[2026-01-10 12:10:03] 2026-01-10 11:09:57,535 | INFO     | all workflow threads have been joined
[2026-01-10 12:10:03] 2026-01-10 11:09:57,535 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 12:10:03] 2026-01-10 11:09:57,535 | INFO     | traces error code: 0
[2026-01-10 12:10:03] 2026-01-10 11:09:57,536 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 12:10:03] 2026-01-10 11:09:57,973 [wrapper] ==== pilot stdout END ====
[2026-01-10 12:10:03] 2026-01-10 11:09:58,058 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 12:10:03] 2026-01-10 11:09:58,170 [wrapper] pilotpid: 24083
[2026-01-10 12:10:03] 2026-01-10 11:09:58,229 [wrapper] Pilot exit status: 0
[2026-01-10 12:10:03] 2026-01-10 11:09:58,791 [wrapper] pandaids: 6963192121
[2026-01-10 12:10:03] 2026-01-10 11:10:00,494 [wrapper] cleanup supervisor_pilot  9685 24084
[2026-01-10 12:10:03] 2026-01-10 11:10:00,611 [wrapper] Test setup, not cleaning
[2026-01-10 12:10:03] 2026-01-10 11:10:00,683 [wrapper] apfmon messages muted
[2026-01-10 12:10:03] 2026-01-10 11:10:00,760 [wrapper] ==== wrapper stdout END ====
[2026-01-10 12:10:03] 2026-01-10 11:10:00,846 [wrapper] ==== wrapper stderr END ====
[2026-01-10 12:10:03]  *** Error codes and diagnostics ***
[2026-01-10 12:10:03]     "exeErrorCode": 0,
[2026-01-10 12:10:03]     "exeErrorDiag": "",
[2026-01-10 12:10:03]     "pilotErrorCode": 0,
[2026-01-10 12:10:03]     "pilotErrorDiag": "",
[2026-01-10 12:10:03]  *** Listing of results directory ***
[2026-01-10 12:10:03] total 448888
[2026-01-10 12:10:03] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 12:10:03] -rwx------. 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-10 12:10:03] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-10 12:10:03] -rw-r--r--. 1 boinc boinc       100 Jan 10 07:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 12:10:03] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 07:02 run_atlas
[2026-01-10 12:10:03] -rw-r--r--. 1 boinc boinc       105 Jan 10 07:02 job.xml
[2026-01-10 12:10:03] -rw-r--r--. 1 boinc boinc      6390 Jan 10 07:02 init_data.xml
[2026-01-10 12:10:03] -rw-r--r--. 2 boinc boinc 226789598 Jan 10 07:02 EVNT.47898824._001498.pool.root.1
[2026-01-10 12:10:03] -rw-r--r--. 2 boinc boinc     15847 Jan 10 07:02 start_atlas.sh
[2026-01-10 12:10:03] drwxrwx--x. 2 boinc boinc        68 Jan 10 07:02 shared
[2026-01-10 12:10:03] -rw-r--r--. 2 boinc boinc    592399 Jan 10 07:02 input.tar.gz
[2026-01-10 12:10:03] -rw-r--r--. 1 boinc boinc         0 Jan 10 07:02 boinc_lockfile
[2026-01-10 12:10:03] -rw-r--r--. 1 boinc boinc      2520 Jan 10 07:02 pandaJob.out
[2026-01-10 12:10:03] -rw-------. 1 boinc boinc    989374 Jan 10 07:07 agis_schedconf.cvmfs.json
[2026-01-10 12:10:03] drwx------. 5 boinc boinc      4096 Jan 10 07:07 pilot3
[2026-01-10 12:10:03] -rw-------. 1 boinc boinc 223151950 Jan 10 12:05 HITS.47898826._038989.pool.root.1
[2026-01-10 12:10:03] -rw-r--r--. 1 boinc boinc       531 Jan 10 12:05 boinc_task_state.xml
[2026-01-10 12:10:03] -rw-------. 1 boinc boinc      1020 Jan 10 12:06 memory_monitor_summary.json
[2026-01-10 12:10:03] -rw-------. 1 boinc boinc   1516240 Jan 10 12:07 agis_ddmendpoints.agis.ALL.json
[2026-01-10 12:10:03] -rw-------. 1 boinc boinc    506542 Jan 10 12:07 log.47898826._038989.job.log.tgz.1
[2026-01-10 12:10:03] -rw-------. 1 boinc boinc      7787 Jan 10 12:08 heartbeat.json
[2026-01-10 12:10:03] -rw-------. 1 boinc boinc        95 Jan 10 12:09 pilot_heartbeat.json
[2026-01-10 12:10:03] -rw-r--r--. 1 boinc boinc        28 Jan 10 12:09 wrapper_checkpoint.txt
[2026-01-10 12:10:03] -rw-r--r--. 1 boinc boinc      8192 Jan 10 12:09 boinc_mmap_file
[2026-01-10 12:10:03] -rw-------. 1 boinc boinc      5070 Jan 10 12:09 pilotlog.txt
[2026-01-10 12:10:03] -rw-------. 1 boinc boinc   2406645 Jan 10 12:10 log.47898826._038989.job.log.1
[2026-01-10 12:10:03] -rw-------. 1 boinc boinc       357 Jan 10 12:10 output.list
[2026-01-10 12:10:03] -rw-r--r--. 1 boinc boinc       620 Jan 10 12:10 runtime_log
[2026-01-10 12:10:03] -rw-------. 1 boinc boinc   2928640 Jan 10 12:10 result.tar.gz
[2026-01-10 12:10:03] -rw-r--r--. 1 boinc boinc      8817 Jan 10 12:10 runtime_log.err
[2026-01-10 12:10:03] -rw-------. 1 boinc boinc       657 Jan 10 12:10 g5lKDmsCJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIEmKDmdyFkMn.diag
[2026-01-10 12:10:03] -rw-r--r--. 1 boinc boinc     20712 Jan 10 12:10 stderr.txt
[2026-01-10 12:10:03] HITS file was successfully produced:
[2026-01-10 12:10:03] -rw-------. 1 boinc boinc 223151950 Jan 10 12:05 shared/HITS.pool.root.1
[2026-01-10 12:10:03]  *** Contents of shared directory: ***
[2026-01-10 12:10:03] total 442856
[2026-01-10 12:10:03] -rw-r--r--. 2 boinc boinc 226789598 Jan 10 07:02 ATLAS.root_0
[2026-01-10 12:10:03] -rw-r--r--. 2 boinc boinc     15847 Jan 10 07:02 start_atlas.sh
[2026-01-10 12:10:03] -rw-r--r--. 2 boinc boinc    592399 Jan 10 07:02 input.tar.gz
[2026-01-10 12:10:03] -rw-------. 1 boinc boinc 223151950 Jan 10 12:05 HITS.pool.root.1
[2026-01-10 12:10:03] -rw-------. 1 boinc boinc   2928640 Jan 10 12:10 result.tar.gz
12:10:04 (20300): run_atlas exited; CPU time 77870.461348
12:10:04 (20300): called boinc_finish(0)

</stderr_txt>
]]>

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