Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:55:25 (351607): wrapper (7.7.26015): starting
20:55:25 (351607): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 20:55:25] Arguments: --nthreads 4
[2026-01-11 20:55:25] Threads: 4
[2026-01-11 20:55:25] Checking for CVMFS
[2026-01-11 20:55:25] No cvmfs_config command found, will try listing directly
[2026-01-11 20:55:25] CVMFS is ok
[2026-01-11 20:55:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 20:55:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 20:55:25] Further information can be found at the LHC@home message board.
[2026-01-11 20:55:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 20:55:25] Checking for apptainer binary...
[2026-01-11 20:55:25] which: no apptainer in ((null))
[2026-01-11 20:55:25] apptainer is not installed, using version from CVMFS
[2026-01-11 20:55:25] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 20:55:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2026-01-11 20:55:25] apptainer works
[2026-01-11 20:55:25] Set ATHENA_PROC_NUMBER=4
[2026-01-11 20:55:25] Set ATHENA_CORE_NUMBER=4
[2026-01-11 20:55:25] Starting ATLAS job with PandaID=6963193723
[2026-01-11 20:55:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-12 00:34:11]  *** The last 200 lines of the pilot log: ***
[2026-01-12 00:34:11] 2026-01-11 23:28:55,971 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-12 00:34:11] 2026-01-11 23:28:55,989 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2726.5211796875
[2026-01-12 00:34:11] 2026-01-11 23:28:56,012 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6963193723/memory_monitor_summary.json (trf name=prmon)
[2026-01-12 00:34:11] 2026-01-11 23:28:56,012 | INFO     | extracted standard info from prmon json
[2026-01-12 00:34:11] 2026-01-11 23:28:56,012 | INFO     | extracted standard memory fields from prmon json
[2026-01-12 00:34:11] 2026-01-11 23:28:56,012 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-12 00:34:11] 2026-01-11 23:28:56,013 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-12 00:34:11] 2026-01-11 23:28:56,013 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-12 00:34:11] 2026-01-11 23:28:56,016 | INFO     | fitting pss+swap vs Time
[2026-01-12 00:34:11] 2026-01-11 23:28:56,017 | INFO     | sum of square deviations: 2871616632.5
[2026-01-12 00:34:11] 2026-01-11 23:28:56,018 | INFO     | sum of deviations: 2653742078.4999943
[2026-01-12 00:34:11] 2026-01-11 23:28:56,018 | INFO     | mean x: 1768167747.5
[2026-01-12 00:34:11] 2026-01-11 23:28:56,018 | INFO     | mean y: 2315989.0714285714
[2026-01-12 00:34:11] 2026-01-11 23:28:56,018 | INFO     | intersect: -1631697792.6715295
[2026-01-12 00:34:11] 2026-01-11 23:28:56,018 | INFO     | chi2: 2.292106140254414
[2026-01-12 00:34:11] 2026-01-11 23:28:56,019 | INFO     | sum of square deviations: 2671343110.0
[2026-01-12 00:34:11] 2026-01-11 23:28:56,020 | INFO     | sum of deviations: 17033195492.999998
[2026-01-12 00:34:11] 2026-01-11 23:28:56,020 | INFO     | mean x: 1768167595.0
[2026-01-12 00:34:11] 2026-01-11 23:28:56,020 | INFO     | mean y: 2326722.604878049
[2026-01-12 00:34:11] 2026-01-11 23:28:56,020 | INFO     | intersect: -11271981020.672115
[2026-01-12 00:34:11] 2026-01-11 23:28:56,021 | INFO     | chi2: 1.2975501192740457
[2026-01-12 00:34:11] 2026-01-11 23:28:56,021 | INFO     | current chi2=1.2975501192740457 (change=43.39048718180113 %)
[2026-01-12 00:34:11] 2026-01-11 23:28:56,021 | INFO     | sum of square deviations: 2480604650.0
[2026-01-12 00:34:11] 2026-01-11 23:28:56,022 | INFO     | sum of deviations: 16463194656.999992
[2026-01-12 00:34:11] 2026-01-11 23:28:56,022 | INFO     | mean x: 1768167442.5
[2026-01-12 00:34:11] 2026-01-11 23:28:56,023 | INFO     | mean y: 2326266.78
[2026-01-12 00:34:11] 2026-01-11 23:28:56,023 | INFO     | intersect: -11732588763.733765
[2026-01-12 00:34:11] 2026-01-11 23:28:56,023 | INFO     | chi2: 1.2982810033213363
[2026-01-12 00:34:11] 2026-01-11 23:28:56,023 | INFO     | current chi2=1.2982810033213363 (change=-0.05632800124125599 %)
[2026-01-12 00:34:11] 2026-01-11 23:28:56,023 | INFO     | right removable region: 199
[2026-01-12 00:34:11] 2026-01-11 23:28:56,023 | INFO     | sum of square deviations: 2671343110.0
[2026-01-12 00:34:11] 2026-01-11 23:28:56,025 | INFO     | sum of deviations: -20702902728.0
[2026-01-12 00:34:11] 2026-01-11 23:28:56,025 | INFO     | mean x: 1768167900.0
[2026-01-12 00:34:11] 2026-01-11 23:28:56,025 | INFO     | mean y: 2333514.7317073173
[2026-01-12 00:34:11] 2026-01-11 23:28:56,025 | INFO     | intersect: 13705630520.436089
[2026-01-12 00:34:11] 2026-01-11 23:28:56,025 | INFO     | chi2: 1.0770782219302295
[2026-01-12 00:34:11] 2026-01-11 23:28:56,025 | INFO     | current chi2=1.0770782219302295 (change=53.00923447590963 %)
[2026-01-12 00:34:11] 2026-01-11 23:28:56,026 | INFO     | sum of square deviations: 2480604650.0
[2026-01-12 00:34:11] 2026-01-11 23:28:56,027 | INFO     | sum of deviations: -15769647044.000002
[2026-01-12 00:34:11] 2026-01-11 23:28:56,027 | INFO     | mean x: 1768168052.5
[2026-01-12 00:34:11] 2026-01-11 23:28:56,027 | INFO     | mean y: 2329566.11
[2026-01-12 00:34:11] 2026-01-11 23:28:56,027 | INFO     | intersect: 11242889847.411524
[2026-01-12 00:34:11] 2026-01-11 23:28:56,027 | INFO     | chi2: 1.060413142861805
[2026-01-12 00:34:11] 2026-01-11 23:28:56,027 | INFO     | current chi2=1.060413142861805 (change=1.5472487261472017 %)
[2026-01-12 00:34:11] 2026-01-11 23:28:56,027 | INFO     | left removable region: 20
[2026-01-12 00:34:11] 2026-01-11 23:28:56,028 | INFO     | sum of square deviations: 1778377530.0
[2026-01-12 00:34:11] 2026-01-11 23:28:56,029 | INFO     | sum of deviations: 4580293702.0
[2026-01-12 00:34:11] 2026-01-11 23:28:56,029 | INFO     | mean x: 1768168022.0
[2026-01-12 00:34:11] 2026-01-11 23:28:56,029 | INFO     | mean y: 2335036.4860335197
[2026-01-12 00:34:11] 2026-01-11 23:28:56,029 | INFO     | intersect: -4551663604.76108
[2026-01-12 00:34:11] 2026-01-11 23:28:56,029 | INFO     | chi2: 0.00045702381864556516
[2026-01-12 00:34:11] 2026-01-11 23:28:56,029 | INFO     | current memory leak: 2.58 B/s (using 179 data points, chi2=0.00)
[2026-01-12 00:34:11] 2026-01-11 23:28:56,030 | INFO     | could have reported an average CPU frequency of 2714 MHz (11 samples)
[2026-01-12 00:34:11] 2026-01-11 23:28:56,030 | INFO     | ..............................
[2026-01-12 00:34:11] 2026-01-11 23:28:56,030 | INFO     | . Timing measurements:
[2026-01-12 00:34:11] 2026-01-11 23:28:56,030 | INFO     | . get job = 0 s
[2026-01-12 00:34:11] 2026-01-11 23:28:56,030 | INFO     | . initial setup = 1 s
[2026-01-12 00:34:11] 2026-01-11 23:28:56,030 | INFO     | . payload setup = 8 s
[2026-01-12 00:34:11] 2026-01-11 23:28:56,030 | INFO     | . stage-in = 0 s
[2026-01-12 00:34:11] 2026-01-11 23:28:56,030 | INFO     | . payload execution = 12756 s
[2026-01-12 00:34:11] 2026-01-11 23:28:56,030 | INFO     | . stage-out = 1 s
[2026-01-12 00:34:11] 2026-01-11 23:28:56,030 | INFO     | . log creation = 0 s
[2026-01-12 00:34:11] 2026-01-11 23:28:56,031 | INFO     | ..............................
[2026-01-12 00:34:11] 2026-01-11 23:28:56,115 | INFO     | 
[2026-01-12 00:34:11] 2026-01-11 23:28:56,115 | INFO     | job summary report
[2026-01-12 00:34:11] 2026-01-11 23:28:56,116 | INFO     | --------------------------------------------------
[2026-01-12 00:34:11] 2026-01-11 23:28:56,116 | INFO     | PanDA job id: 6963193723
[2026-01-12 00:34:11] 2026-01-11 23:28:56,116 | INFO     | task id: 47898826
[2026-01-12 00:34:11] 2026-01-11 23:28:56,116 | INFO     | errors: (none)
[2026-01-12 00:34:11] 2026-01-11 23:28:56,116 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-12 00:34:11] 2026-01-11 23:28:56,116 | INFO     | pilot state: finished 
[2026-01-12 00:34:11] 2026-01-11 23:28:56,116 | INFO     | transexitcode: 0
[2026-01-12 00:34:11] 2026-01-11 23:28:56,116 | INFO     | exeerrorcode: 0
[2026-01-12 00:34:11] 2026-01-11 23:28:56,116 | INFO     | exeerrordiag: 
[2026-01-12 00:34:11] 2026-01-11 23:28:56,116 | INFO     | exitcode: 0
[2026-01-12 00:34:11] 2026-01-11 23:28:56,116 | INFO     | exitmsg: OK
[2026-01-12 00:34:11] 2026-01-11 23:28:56,116 | INFO     | cpuconsumptiontime: 49361 s
[2026-01-12 00:34:11] 2026-01-11 23:28:56,116 | INFO     | nevents: 400
[2026-01-12 00:34:11] 2026-01-11 23:28:56,116 | INFO     | neventsw: 0
[2026-01-12 00:34:11] 2026-01-11 23:28:56,116 | INFO     | pid: 363701
[2026-01-12 00:34:11] 2026-01-11 23:28:56,117 | INFO     | pgrp: 363701
[2026-01-12 00:34:11] 2026-01-11 23:28:56,117 | INFO     | corecount: 4
[2026-01-12 00:34:11] 2026-01-11 23:28:56,117 | INFO     | event service: False
[2026-01-12 00:34:11] 2026-01-11 23:28:56,117 | INFO     | sizes: {0: 2283812, 1: 2284011, 7: 2284273, 11: 2284301, 12768: 2314739, 12769: 2323761, 12772: 2323945, 12778: 2324139}
[2026-01-12 00:34:11] 2026-01-11 23:28:56,117 | INFO     | --------------------------------------------------
[2026-01-12 00:34:11] 2026-01-11 23:28:56,117 | INFO     | 
[2026-01-12 00:34:11] 2026-01-11 23:28:56,117 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2026-01-12 00:34:11] 2026-01-11 23:28:56,144 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,144 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,144 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,145 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,145 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,145 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,145 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,145 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,145 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,145 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,145 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,145 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,146 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,146 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,146 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,146 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,146 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-12 00:34:11] 2026-01-11 23:28:56,146 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,146 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-12 00:34:11] 2026-01-11 23:28:56,146 | INFO     | job 6963193723 has completed (purged errors)
[2026-01-12 00:34:11] 2026-01-11 23:28:56,146 | INFO     | overall cleanup function is called
[2026-01-12 00:34:11] 2026-01-11 23:28:57,156 | INFO     | --- collectZombieJob: --- 10, [363701]
[2026-01-12 00:34:11] 2026-01-11 23:28:57,157 | INFO     | zombie collector waiting for pid 363701
[2026-01-12 00:34:11] 2026-01-11 23:28:57,157 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-12 00:34:11] 2026-01-11 23:28:57,157 | INFO     | collected zombie processes
[2026-01-12 00:34:11] 2026-01-11 23:28:57,157 | INFO     | will attempt to kill all subprocesses of pid=363701
[2026-01-12 00:34:11] 2026-01-11 23:28:58,370 | INFO     | PID=355715 has CPU usage=21.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-12 00:34:11] 2026-01-11 23:28:58,370 | INFO     | .. there are 5 such processes running
[2026-01-12 00:34:11] 2026-01-11 23:28:58,665 | INFO     | process IDs to be killed: [363701] (in reverse order)
[2026-01-12 00:34:11] 2026-01-11 23:28:58,891 | WARNING  | found no corresponding commands to process id(s)
[2026-01-12 00:34:11] 2026-01-11 23:28:58,892 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-12 00:34:11] 2026-01-11 23:28:58,921 | INFO     | did not find any defunct processes belonging to 363701
[2026-01-12 00:34:11] 2026-01-11 23:28:58,948 | INFO     | did not find any defunct processes belonging to 363701
[2026-01-12 00:34:11] 2026-01-11 23:28:58,952 | INFO     | ready for new job
[2026-01-12 00:34:11] 2026-01-11 23:28:58,952 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-12 00:34:11] 2026-01-11 23:28:58,954 | INFO     | ***************************************
[2026-01-12 00:34:11] 2026-01-11 23:28:58,954 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-12 00:34:11] 2026-01-11 23:28:58,954 | INFO     | ***************************************
[2026-01-12 00:34:11] 2026-01-11 23:28:58,955 | INFO     | 
[2026-01-12 00:34:11] 2026-01-11 23:28:58,963 | INFO     | architecture information:
[2026-01-12 00:34:11] 2026-01-11 23:28:58,963 | INFO     | executing command: cat /etc/os-release
[2026-01-12 00:34:11] 2026-01-11 23:28:58,982 | INFO     | cat /etc/os-release:
[2026-01-12 00:34:11] NAME="CentOS Linux"
[2026-01-12 00:34:11] VERSION="7 (Core)"
[2026-01-12 00:34:11] ID="centos"
[2026-01-12 00:34:11] ID_LIKE="rhel fedora"
[2026-01-12 00:34:11] VERSION_ID="7"
[2026-01-12 00:34:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-12 00:34:11] ANSI_COLOR="0;31"
[2026-01-12 00:34:11] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-12 00:34:11] HOME_URL="https://www.centos.org/"
[2026-01-12 00:34:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-12 00:34:11] 
[2026-01-12 00:34:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-12 00:34:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-12 00:34:11] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-12 00:34:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-12 00:34:11] 
[2026-01-12 00:34:11] 2026-01-11 23:28:58,982 | INFO     | ***************************************
[2026-01-12 00:34:11] 2026-01-11 23:28:59,485 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2026-01-12 00:34:11] 2026-01-11 23:28:59,512 | INFO     | sufficient remaining disk space (3348309737472 B)
[2026-01-12 00:34:11] 2026-01-11 23:28:59,513 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-12 00:34:11] 2026-01-11 23:28:59,513 | INFO     | current server update state: UPDATING_FINAL
[2026-01-12 00:34:11] 2026-01-11 23:28:59,513 | INFO     | update_server=False
[2026-01-12 00:34:11] 2026-01-11 23:28:59,513 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-12 00:34:11] 2026-01-11 23:28:59,514 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-12 00:34:11] 2026-01-11 23:28:59,514 | INFO     | aborting loop
[2026-01-12 00:34:11] 2026-01-11 23:29:00,028 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-12 00:34:11] 2026-01-11 23:29:00,174 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-12 00:34:11] 2026-01-11 23:29:00,422 | INFO     | all data control threads have been joined
[2026-01-12 00:34:11] 2026-01-11 23:29:00,519 | INFO     | [job] retrieve thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:00,519 | INFO     | [job] job monitor thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:00,691 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:00,732 | INFO     | all payload control threads have been joined
[2026-01-12 00:34:11] 2026-01-11 23:29:00,990 | INFO     | [data] copytool_in thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:00,998 | INFO     | [payload] validate_post thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:01,046 | INFO     | all job control threads have been joined
[2026-01-12 00:34:11] 2026-01-11 23:29:01,129 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-12 00:34:11] 2026-01-11 23:29:01,165 | INFO     | [job] validate thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:01,264 | INFO     | [payload] failed_post thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:01,427 | INFO     | [data] control thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:01,457 | INFO     | [job] create_data_payload thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:01,511 | INFO     | [payload] execute_payloads thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:01,577 | INFO     | [payload] validate_pre thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:01,737 | INFO     | [payload] control thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:02,033 | INFO     | [data] copytool_out thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:02,052 | INFO     | [job] control thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:02,135 | INFO     | [job] queue monitor thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:04,180 | INFO     | [data] queue_monitor thread has finished
[2026-01-12 00:34:11] 2026-01-11 23:29:31,371 | INFO     | PID=355715 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-12 00:34:11] 2026-01-11 23:29:31,371 | INFO     | .. there are 5 such processes running
[2026-01-12 00:34:11] 2026-01-11 23:29:31,372 | INFO     | found 0 job(s) in 20 queues
[2026-01-12 00:34:11] 2026-01-11 23:29:31,372 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-12 00:34:11] 2026-01-11 23:29:31,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-12 00:34:11] 2026-01-11 23:29:59,031 | INFO     | [monitor] cgroup control has ended
[2026-01-12 00:34:11] 2026-01-11 23:29:59,708 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22533081069376)>', '<ExcThread(monitor, started 22532839139072)>']
[2026-01-12 00:34:11] 2026-01-11 23:30:00,517 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-12 00:34:11] 2026-01-11 23:30:00,517 | INFO     | [monitor] control thread has ended
[2026-01-12 00:34:11] 2026-01-11 23:30:04,736 | INFO     | all workflow threads have been joined
[2026-01-12 00:34:11] 2026-01-11 23:30:04,737 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-12 00:34:11] 2026-01-11 23:30:04,737 | INFO     | traces error code: 0
[2026-01-12 00:34:11] 2026-01-11 23:30:04,737 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-12 00:34:11] 2026-01-11 23:30:04,874 [wrapper] ==== pilot stdout END ====
[2026-01-12 00:34:11] 2026-01-11 23:30:04,877 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-12 00:34:11] 2026-01-11 23:30:04,880 [wrapper] pilotpid: 355715
[2026-01-12 00:34:11] 2026-01-11 23:30:04,883 [wrapper] Pilot exit status: 0
[2026-01-12 00:34:11] 2026-01-11 23:30:04,896 [wrapper] pandaids: 6963193723
[2026-01-12 00:34:11] 2026-01-11 23:30:05,047 [wrapper] cleanup supervisor_pilot  677854 355716
[2026-01-12 00:34:11] 2026-01-11 23:30:05,050 [wrapper] Test setup, not cleaning
[2026-01-12 00:34:11] 2026-01-11 23:30:05,054 [wrapper] apfmon messages muted
[2026-01-12 00:34:11] 2026-01-11 23:30:05,057 [wrapper] ==== wrapper stdout END ====
[2026-01-12 00:34:11] 2026-01-11 23:30:05,060 [wrapper] ==== wrapper stderr END ====
[2026-01-12 00:34:11]  *** Error codes and diagnostics ***
[2026-01-12 00:34:11]     "exeErrorCode": 0,
[2026-01-12 00:34:11]     "exeErrorDiag": "",
[2026-01-12 00:34:11]     "pilotErrorCode": 0,
[2026-01-12 00:34:11]     "pilotErrorDiag": "",
[2026-01-12 00:34:11]  *** Listing of results directory ***
[2026-01-12 00:34:11] total 437024
[2026-01-12 00:34:11] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-12 00:34:11] -rwx------ 1 boinc boinc     36322 Jan  9 05:23 runpilot2-wrapper.sh
[2026-01-12 00:34:11] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:24 queuedata.json
[2026-01-12 00:34:11] -rw-r--r-- 1 boinc boinc       100 Jan 11 20:55 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-12 00:34:11] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 20:55 run_atlas
[2026-01-12 00:34:11] -rw-r--r-- 1 boinc boinc       105 Jan 11 20:55 job.xml
[2026-01-12 00:34:11] -rw-r--r-- 1 boinc boinc      6692 Jan 11 20:55 init_data.xml
[2026-01-12 00:34:11] -rw-r--r-- 2 boinc boinc 223573478 Jan 11 20:55 EVNT.47898824._001506.pool.root.1
[2026-01-12 00:34:11] -rw-r--r-- 2 boinc boinc     15847 Jan 11 20:55 start_atlas.sh
[2026-01-12 00:34:11] drwxrwx--x 2 boinc boinc      4096 Jan 11 20:55 shared
[2026-01-12 00:34:11] -rw-r--r-- 2 boinc boinc    592392 Jan 11 20:55 input.tar.gz
[2026-01-12 00:34:11] -rw-r--r-- 1 boinc boinc         0 Jan 11 20:55 boinc_lockfile
[2026-01-12 00:34:11] -rw-r--r-- 1 boinc boinc      2520 Jan 11 20:55 pandaJob.out
[2026-01-12 00:34:11] -rw------- 1 boinc boinc    989946 Jan 11 20:55 agis_schedconf.cvmfs.json
[2026-01-12 00:34:11] drwx------ 5 boinc boinc      4096 Jan 11 20:55 pilot3
[2026-01-12 00:34:11] -rw------- 1 boinc boinc 215661495 Jan 12 00:28 HITS.47898826._039196.pool.root.1
[2026-01-12 00:34:11] -rw-r--r-- 1 boinc boinc       528 Jan 12 00:28 boinc_task_state.xml
[2026-01-12 00:34:11] -rw------- 1 boinc boinc      1029 Jan 12 00:28 memory_monitor_summary.json
[2026-01-12 00:34:11] -rw------- 1 boinc boinc   1516240 Jan 12 00:28 agis_ddmendpoints.agis.ALL.json
[2026-01-12 00:34:11] -rw------- 1 boinc boinc    395713 Jan 12 00:28 log.47898826._039196.job.log.tgz.1
[2026-01-12 00:34:11] -rw------- 1 boinc boinc      7784 Jan 12 00:28 heartbeat.json
[2026-01-12 00:34:11] -rw------- 1 boinc boinc        95 Jan 12 00:29 pilot_heartbeat.json
[2026-01-12 00:34:11] -rw------- 1 boinc boinc      4834 Jan 12 00:30 pilotlog.txt
[2026-01-12 00:34:11] -rw------- 1 boinc boinc   1783305 Jan 12 00:30 log.47898826._039196.job.log.1
[2026-01-12 00:34:11] -rw------- 1 boinc boinc       357 Jan 12 00:30 output.list
[2026-01-12 00:34:11] -rw-r--r-- 1 boinc boinc       620 Jan 12 00:30 runtime_log
[2026-01-12 00:34:11] -rw------- 1 boinc boinc   2201600 Jan 12 00:30 result.tar.gz
[2026-01-12 00:34:11] -rw-r--r-- 1 boinc boinc      9223 Jan 12 00:30 runtime_log.err
[2026-01-12 00:34:11] -rw------- 1 boinc boinc       665 Jan 12 00:30 AHXMDm4CJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLEmKDmpQHiQm.diag
[2026-01-12 00:34:11] -rw-r--r-- 1 boinc boinc        26 Jan 12 00:34 wrapper_checkpoint.txt
[2026-01-12 00:34:11] -rw-r--r-- 1 boinc boinc      8192 Jan 12 00:34 boinc_mmap_file
[2026-01-12 00:34:11] -rw-r--r-- 1 boinc boinc     20953 Jan 12 00:34 stderr.txt
[2026-01-12 00:34:11] HITS file was successfully produced:
[2026-01-12 00:34:11] -rw------- 1 boinc boinc 215661495 Jan 12 00:28 shared/HITS.pool.root.1
[2026-01-12 00:34:11]  *** Contents of shared directory: ***
[2026-01-12 00:34:11] total 431700
[2026-01-12 00:34:11] -rw-r--r-- 2 boinc boinc 223573478 Jan 11 20:55 ATLAS.root_0
[2026-01-12 00:34:11] -rw-r--r-- 2 boinc boinc     15847 Jan 11 20:55 start_atlas.sh
[2026-01-12 00:34:11] -rw-r--r-- 2 boinc boinc    592392 Jan 11 20:55 input.tar.gz
[2026-01-12 00:34:11] -rw------- 1 boinc boinc 215661495 Jan 12 00:28 HITS.pool.root.1
[2026-01-12 00:34:11] -rw------- 1 boinc boinc   2201600 Jan 12 00:30 result.tar.gz
00:34:12 (351607): run_atlas exited; CPU time 50210.430804
00:34:12 (351607): called boinc_finish(0)

</stderr_txt>
]]>

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