Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
04:34:59 (276997): wrapper (7.7.26015): starting
04:34:59 (276997): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 04:34:59] Arguments: --nthreads 4
[2026-01-11 04:34:59] Threads: 4
[2026-01-11 04:34:59] Checking for CVMFS
[2026-01-11 04:34:59] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 04:34:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 04:34:59] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 04:35:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 04:35:00] 2.12.7.0 11818 100 55500 155002 3 253 3922779 6144000 3953 130560 0 701623 99.996 7033 1140 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-11 04:35:00] CVMFS is ok
[2026-01-11 04:35:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 04:35:00] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-11 04:35:00] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-11 04:35:00] Further information can be found at the LHC@home message board.
[2026-01-11 04:35:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 04:35:00] Checking for apptainer binary...
[2026-01-11 04:35:00] apptainer is not installed, using version from CVMFS
[2026-01-11 04:35:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 04:35:00] biggy
[2026-01-11 04:35:00] apptainer works
[2026-01-11 04:35:00] Set ATHENA_PROC_NUMBER=4
[2026-01-11 04:35:00] Set ATHENA_CORE_NUMBER=4
[2026-01-11 04:35:00] Starting ATLAS job with PandaID=6963192020
[2026-01-11 04:35:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/single_8TB/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 06:16:21]  *** The last 200 lines of the pilot log: ***
[2026-01-11 06:16:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-11 06:16:21]  replicas=None
[2026-01-11 06:16:21]  scope=mc23_13p6TeV
[2026-01-11 06:16:21]  status=None
[2026-01-11 06:16:21]  status_code=0
[2026-01-11 06:16:21]  storage_token=
[2026-01-11 06:16:21]  surl=/single_8TB/boinc-client/slots/0/PanDA_Pilot-6963192020/log.47898826._038888.job.log.tgz.1
[2026-01-11 06:16:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/d8/log.47898826._038888.job.log.tgz.1
[2026-01-11 06:16:21]  workdir=None
[2026-01-11 06:16:21] ]
[2026-01-11 06:16:21] 2026-01-11 05:15:18,382 | INFO     | transferring file log.47898826._038888.job.log.tgz.1 from /single_8TB/boinc-client/slots/0/PanDA_Pilot-6963192020/log.47898826._038888.job.log.tgz.1 to /single_8TB
[2026-01-11 06:16:21] 2026-01-11 05:15:18,382 | INFO     | executing command: /usr/bin/env mv /single_8TB/boinc-client/slots/0/PanDA_Pilot-6963192020/log.47898826._038888.job.log.tgz.1 /single_8TB/boinc-client/slots/0/log.
[2026-01-11 06:16:21] 2026-01-11 05:15:18,392 | INFO     | adding to output.list: log.47898826._038888.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ac/d8/log.47898826._038888.job.log.tg
[2026-01-11 06:16:21] 2026-01-11 05:15:18,392 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 06:16:21] 2026-01-11 05:15:18,392 | INFO     | summary of transferred files:
[2026-01-11 06:16:21] 2026-01-11 05:15:18,392 | INFO     |  -- lfn=log.47898826._038888.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 06:16:21] 2026-01-11 05:15:18,393 | INFO     | stage-out finished correctly
[2026-01-11 06:16:21] 2026-01-11 05:15:18,431 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 06:16:21] 2026-01-11 05:15:18,469 | INFO     | monitor loop #452: job 0:6963192020 is in state 'finished'
[2026-01-11 06:16:21] 2026-01-11 05:15:18,469 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:16:21] 2026-01-11 05:15:18,524 | INFO     | time since job start (6013s) is within the limit (349056.0s)
[2026-01-11 06:16:21] 2026-01-11 05:15:19,531 | INFO     | job 6963192020 has state=finished
[2026-01-11 06:16:21] 2026-01-11 05:15:19,531 | INFO     | preparing for final server update for job 6963192020 in state='finished'
[2026-01-11 06:16:21] 2026-01-11 05:15:19,532 | INFO     | this job has now completed (state=finished)
[2026-01-11 06:16:21] 2026-01-11 05:15:19,532 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 06:16:21] 2026-01-11 05:15:19,532 | INFO     | log transfer has been attempted: DONE
[2026-01-11 06:16:21] 2026-01-11 05:15:19,532 | INFO     | job 6963192020 has finished - writing final server update
[2026-01-11 06:16:21] 2026-01-11 05:15:19,532 | INFO     | total number of processed events: 400 (read)
[2026-01-11 06:16:21] 2026-01-11 05:15:19,533 | INFO     | executing command: lscpu
[2026-01-11 06:16:21] 2026-01-11 05:15:19,551 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 06:16:21] 2026-01-11 05:15:20,529 | INFO     | time since job start (6015s) is within the limit (349056.0s)
[2026-01-11 06:16:21] 2026-01-11 05:15:20,972 | INFO     | monitor loop #453: job 0:6963192020 is in state 'finished'
[2026-01-11 06:16:21] 2026-01-11 05:15:20,972 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:16:21] 2026-01-11 05:15:22,534 | INFO     | time since job start (6017s) is within the limit (349056.0s)
[2026-01-11 06:16:21] 2026-01-11 05:15:23,474 | INFO     | monitor loop #454: job 0:6963192020 is in state 'finished'
[2026-01-11 06:16:21] 2026-01-11 05:15:23,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 06:16:21] 2026-01-11 05:15:24,539 | INFO     | time since job start (6019s) is within the limit (349056.0s)
[2026-01-11 06:16:21] 2026-01-11 05:15:25,539 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-11 06:16:21] 2026-01-11 05:15:25,542 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 5282.72465625
[2026-01-11 06:16:21] 2026-01-11 05:15:25,544 | INFO     | using path: /single_8TB/boinc-client/slots/0/PanDA_Pilot-6963192020/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 06:16:21] 2026-01-11 05:15:25,544 | INFO     | extracted standard info from prmon json
[2026-01-11 06:16:21] 2026-01-11 05:15:25,545 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 06:16:21] 2026-01-11 05:15:25,545 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 06:16:21] 2026-01-11 05:15:25,545 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 06:16:21] 2026-01-11 05:15:25,545 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 06:16:21] 2026-01-11 05:15:25,546 | INFO     | fitting pss+swap vs Time
[2026-01-11 06:16:21] 2026-01-11 05:15:25,546 | INFO     | sum of square deviations: 241429643.0
[2026-01-11 06:16:21] 2026-01-11 05:15:25,546 | INFO     | sum of deviations: -10708471279.499998
[2026-01-11 06:16:21] 2026-01-11 05:15:25,546 | INFO     | mean x: 1768105602.5
[2026-01-11 06:16:21] 2026-01-11 05:15:25,546 | INFO     | mean y: 2396625.184782609
[2026-01-11 06:16:21] 2026-01-11 05:15:25,546 | INFO     | intersect: 78425691412.95154
[2026-01-11 06:16:21] 2026-01-11 05:15:25,546 | INFO     | chi2: 0.03348167184672264
[2026-01-11 06:16:21] 2026-01-11 05:15:25,546 | INFO     | current memory leak: -44.35 B/s (using 92 data points, chi2=0.03)
[2026-01-11 06:16:21] 2026-01-11 05:15:25,546 | INFO     | could have reported an average CPU frequency of 5236 MHz (7 samples)
[2026-01-11 06:16:21] 2026-01-11 05:15:25,547 | INFO     | ..............................
[2026-01-11 06:16:21] 2026-01-11 05:15:25,547 | INFO     | . Timing measurements:
[2026-01-11 06:16:21] 2026-01-11 05:15:25,547 | INFO     | . get job = 0 s
[2026-01-11 06:16:21] 2026-01-11 05:15:25,547 | INFO     | . initial setup = 1 s
[2026-01-11 06:16:21] 2026-01-11 05:15:25,547 | INFO     | . payload setup = 2 s
[2026-01-11 06:16:21] 2026-01-11 05:15:25,547 | INFO     | . stage-in = 0 s
[2026-01-11 06:16:21] 2026-01-11 05:15:25,547 | INFO     | . payload execution = 5994 s
[2026-01-11 06:16:21] 2026-01-11 05:15:25,547 | INFO     | . stage-out = 0 s
[2026-01-11 06:16:21] 2026-01-11 05:15:25,547 | INFO     | . log creation = 0 s
[2026-01-11 06:16:21] 2026-01-11 05:15:25,547 | INFO     | ..............................
[2026-01-11 06:16:21] 2026-01-11 05:15:25,915 | INFO     | 
[2026-01-11 06:16:21] 2026-01-11 05:15:25,915 | INFO     | job summary report
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | --------------------------------------------------
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | PanDA job id: 6963192020
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | task id: 47898826
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | errors: (none)
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | pilot state: finished 
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | transexitcode: 0
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | exeerrorcode: 0
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | exeerrordiag: 
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | exitcode: 0
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | exitmsg: OK
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | cpuconsumptiontime: 23239 s
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | nevents: 400
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | neventsw: 0
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | pid: 287559
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | pgrp: 287559
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | corecount: 4
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | event service: False
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | sizes: {0: 2283981, 2: 2284243, 11: 2284271, 6000: 2311181, 6001: 2320255, 6008: 2320393}
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | --------------------------------------------------
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | 
[2026-01-11 06:16:21] 2026-01-11 05:15:25,916 | INFO     | executing command: ls -lF /single_8TB/boinc-client/slots/0
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,929 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 06:16:21] 2026-01-11 05:15:25,930 | INFO     | job 6963192020 has completed (purged errors)
[2026-01-11 06:16:21] 2026-01-11 05:15:25,930 | INFO     | overall cleanup function is called
[2026-01-11 06:16:21] 2026-01-11 05:15:26,935 | INFO     | --- collectZombieJob: --- 10, [287559]
[2026-01-11 06:16:21] 2026-01-11 05:15:26,935 | INFO     | zombie collector waiting for pid 287559
[2026-01-11 06:16:21] 2026-01-11 05:15:26,935 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 06:16:21] 2026-01-11 05:15:26,935 | INFO     | collected zombie processes
[2026-01-11 06:16:21] 2026-01-11 05:15:26,935 | INFO     | will attempt to kill all subprocesses of pid=287559
[2026-01-11 06:16:21] 2026-01-11 05:15:27,059 | INFO     | process IDs to be killed: [287559] (in reverse order)
[2026-01-11 06:16:21] 2026-01-11 05:15:27,107 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 06:16:21] 2026-01-11 05:15:27,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 06:16:21] 2026-01-11 05:15:27,111 | INFO     | did not find any defunct processes belonging to 287559
[2026-01-11 06:16:21] 2026-01-11 05:15:27,115 | INFO     | did not find any defunct processes belonging to 287559
[2026-01-11 06:16:21] 2026-01-11 05:15:27,115 | INFO     | ready for new job
[2026-01-11 06:16:21] 2026-01-11 05:15:27,115 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 06:16:21] 2026-01-11 05:15:27,116 | INFO     | ***************************************
[2026-01-11 06:16:21] 2026-01-11 05:15:27,116 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 06:16:21] 2026-01-11 05:15:27,116 | INFO     | ***************************************
[2026-01-11 06:16:21] 2026-01-11 05:15:27,116 | INFO     | 
[2026-01-11 06:16:21] 2026-01-11 05:15:27,117 | INFO     | architecture information:
[2026-01-11 06:16:21] 2026-01-11 05:15:27,117 | INFO     | executing command: cat /etc/os-release
[2026-01-11 06:16:21] 2026-01-11 05:15:27,125 | INFO     | cat /etc/os-release:
[2026-01-11 06:16:21] NAME="CentOS Linux"
[2026-01-11 06:16:21] VERSION="7 (Core)"
[2026-01-11 06:16:21] ID="centos"
[2026-01-11 06:16:21] ID_LIKE="rhel fedora"
[2026-01-11 06:16:21] VERSION_ID="7"
[2026-01-11 06:16:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 06:16:21] ANSI_COLOR="0;31"
[2026-01-11 06:16:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 06:16:21] HOME_URL="https://www.centos.org/"
[2026-01-11 06:16:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 06:16:21] 
[2026-01-11 06:16:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 06:16:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 06:16:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 06:16:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 06:16:21] 
[2026-01-11 06:16:21] 2026-01-11 05:15:27,125 | INFO     | ***************************************
[2026-01-11 06:16:21] 2026-01-11 05:15:27,627 | INFO     | executing command: df -mP /single_8TB/boinc-client/slots/0
[2026-01-11 06:16:21] 2026-01-11 05:15:27,636 | INFO     | sufficient remaining disk space (3317196390400 B)
[2026-01-11 06:16:21] 2026-01-11 05:15:27,636 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 06:16:21] 2026-01-11 05:15:27,637 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 06:16:21] 2026-01-11 05:15:27,637 | INFO     | update_server=False
[2026-01-11 06:16:21] 2026-01-11 05:15:27,637 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 06:16:21] 2026-01-11 05:15:27,637 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:16:21] 2026-01-11 05:15:27,637 | INFO     | aborting loop
[2026-01-11 06:16:21] 2026-01-11 05:15:27,672 | INFO     | all job control threads have been joined
[2026-01-11 06:16:21] 2026-01-11 05:15:27,890 | INFO     | all data control threads have been joined
[2026-01-11 06:16:21] 2026-01-11 05:15:28,641 | INFO     | [job] retrieve thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:28,642 | INFO     | [job] job monitor thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:28,668 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:28,674 | INFO     | all payload control threads have been joined
[2026-01-11 06:16:21] 2026-01-11 05:15:28,676 | INFO     | [job] control thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:28,895 | INFO     | [data] control thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:28,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 06:16:21] 2026-01-11 05:15:28,949 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:28,974 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 06:16:21] 2026-01-11 05:15:29,031 | INFO     | [data] copytool_in thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:29,140 | INFO     | [payload] failed_post thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:29,679 | INFO     | [payload] control thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:29,689 | INFO     | [payload] validate_post thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:30,072 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:30,126 | INFO     | [job] validate thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:30,592 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 06:16:21] 2026-01-11 05:15:30,946 | INFO     | [data] copytool_out thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:31,597 | INFO     | [job] queue monitor thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:32,980 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:38,538 | INFO     | job.realtimelogging is not enabled
[2026-01-11 06:16:21] 2026-01-11 05:15:39,543 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 06:16:21] 2026-01-11 05:15:57,744 | INFO     | PID=280867 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 06:16:21] 2026-01-11 05:15:57,744 | INFO     | .. there are 6 such processes running
[2026-01-11 06:16:21] 2026-01-11 05:15:57,744 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 06:16:21] 2026-01-11 05:15:57,744 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 06:16:21] 2026-01-11 05:15:57,745 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 06:16:21] 2026-01-11 05:16:14,884 | INFO     | [monitor] cgroup control has ended
[2026-01-11 06:16:21] 2026-01-11 05:16:15,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131512708020032)>', '<ExcThread(monitor, started 131511881815808)>']
[2026-01-11 06:16:21] 2026-01-11 05:16:16,836 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 06:16:21] 2026-01-11 05:16:16,836 | INFO     | [monitor] control thread has ended
[2026-01-11 06:16:21] 2026-01-11 05:16:20,912 | INFO     | all workflow threads have been joined
[2026-01-11 06:16:21] 2026-01-11 05:16:20,912 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 06:16:21] 2026-01-11 05:16:20,912 | INFO     | traces error code: 0
[2026-01-11 06:16:21] 2026-01-11 05:16:20,912 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 06:16:21] 2026-01-11 05:16:20,967 [wrapper] ==== pilot stdout END ====
[2026-01-11 06:16:21] 2026-01-11 05:16:20,968 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 06:16:21] 2026-01-11 05:16:20,970 [wrapper] pilotpid: 280867
[2026-01-11 06:16:21] 2026-01-11 05:16:20,971 [wrapper] Pilot exit status: 0
[2026-01-11 06:16:21] 2026-01-11 05:16:20,975 [wrapper] pandaids: 6963192020
[2026-01-11 06:16:21] 2026-01-11 05:16:21,004 [wrapper] cleanup supervisor_pilot  366178 280868
[2026-01-11 06:16:21] 2026-01-11 05:16:21,006 [wrapper] Test setup, not cleaning
[2026-01-11 06:16:21] 2026-01-11 05:16:21,008 [wrapper] apfmon messages muted
[2026-01-11 06:16:21] 2026-01-11 05:16:21,009 [wrapper] ==== wrapper stdout END ====
[2026-01-11 06:16:21] 2026-01-11 05:16:21,011 [wrapper] ==== wrapper stderr END ====
[2026-01-11 06:16:21]  *** Error codes and diagnostics ***
[2026-01-11 06:16:21]     "exeErrorCode": 0,
[2026-01-11 06:16:21]     "exeErrorDiag": "",
[2026-01-11 06:16:21]     "pilotErrorCode": 0,
[2026-01-11 06:16:21]     "pilotErrorDiag": "",
[2026-01-11 06:16:21]  *** Listing of results directory ***
[2026-01-11 06:16:21] total 440152
[2026-01-11 06:16:21] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-11 06:16:21] -rwx------ 1 boinc boinc     36322 Jan  9 05:25 runpilot2-wrapper.sh
[2026-01-11 06:16:21] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:30 queuedata.json
[2026-01-11 06:16:21] -rw-r--r-- 1 boinc boinc       105 Jan 11 04:34 job.xml
[2026-01-11 06:16:21] -rw-r--r-- 1 boinc boinc       100 Jan 11 04:34 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 06:16:21] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 04:34 run_atlas
[2026-01-11 06:16:21] -rw-r--r-- 2 boinc boinc 222526274 Jan 11 04:34 EVNT.47898824._001494.pool.root.1
[2026-01-11 06:16:21] -rw-r--r-- 2 boinc boinc    592395 Jan 11 04:34 input.tar.gz
[2026-01-11 06:16:21] drwxrwx--x 2 boinc boinc         5 Jan 11 04:34 shared
[2026-01-11 06:16:21] -rw-r--r-- 1 boinc boinc     10105 Jan 11 04:34 init_data.xml
[2026-01-11 06:16:21] -rw-r--r-- 1 boinc boinc         0 Jan 11 04:34 boinc_setup_complete
[2026-01-11 06:16:21] -rw-r--r-- 2 boinc boinc     15847 Jan 11 04:34 start_atlas.sh
[2026-01-11 06:16:21] -rw-r--r-- 1 boinc boinc         0 Jan 11 04:34 boinc_lockfile
[2026-01-11 06:16:21] -rw-r--r-- 1 boinc boinc      2520 Jan 11 04:35 pandaJob.out
[2026-01-11 06:16:21] -rw------- 1 boinc boinc    989548 Jan 11 04:35 agis_schedconf.cvmfs.json
[2026-01-11 06:16:21] -rw------- 1 boinc boinc   1516240 Jan 11 04:35 agis_ddmendpoints.agis.ALL.json
[2026-01-11 06:16:21] drwx------ 5 boinc boinc        22 Jan 11 04:35 pilot3
[2026-01-11 06:16:21] -rw------- 1 boinc boinc 222637340 Jan 11 06:14 HITS.47898826._038888.pool.root.1
[2026-01-11 06:16:21] -rw-r--r-- 1 boinc boinc       529 Jan 11 06:15 boinc_task_state.xml
[2026-01-11 06:16:21] -rw------- 1 boinc boinc      1038 Jan 11 06:15 memory_monitor_summary.json
[2026-01-11 06:16:21] -rw------- 1 boinc boinc        95 Jan 11 06:15 pilot_heartbeat.json
[2026-01-11 06:16:21] -rw------- 1 boinc boinc    289255 Jan 11 06:15 log.47898826._038888.job.log.tgz.1
[2026-01-11 06:16:21] -rw------- 1 boinc boinc      7756 Jan 11 06:15 heartbeat.json
[2026-01-11 06:16:21] -rw-r--r-- 1 boinc boinc      8192 Jan 11 06:16 boinc_mmap_file
[2026-01-11 06:16:21] -rw-r--r-- 1 boinc boinc        27 Jan 11 06:16 wrapper_checkpoint.txt
[2026-01-11 06:16:21] -rw------- 1 boinc boinc      4906 Jan 11 06:16 pilotlog.txt
[2026-01-11 06:16:21] -rw------- 1 boinc boinc    892845 Jan 11 06:16 log.47898826._038888.job.log.1
[2026-01-11 06:16:21] -rw------- 1 boinc boinc       357 Jan 11 06:16 output.list
[2026-01-11 06:16:21] -rw-r--r-- 1 boinc boinc       620 Jan 11 06:16 runtime_log
[2026-01-11 06:16:21] -rw------- 1 boinc boinc   1198080 Jan 11 06:16 result.tar.gz
[2026-01-11 06:16:21] -rw-r--r-- 1 boinc boinc      8939 Jan 11 06:16 runtime_log.err
[2026-01-11 06:16:21] -rw------- 1 boinc boinc       652 Jan 11 06:16 dkUKDmZFJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmJChKDmN6bSHm.diag
[2026-01-11 06:16:21] -rw-r--r-- 1 boinc boinc     21994 Jan 11 06:16 stderr.txt
[2026-01-11 06:16:21] HITS file was successfully produced:
[2026-01-11 06:16:21] -rw------- 1 boinc boinc 222637340 Jan 11 06:14 shared/HITS.pool.root.1
[2026-01-11 06:16:21]  *** Contents of shared directory: ***
[2026-01-11 06:16:21] total 435704
[2026-01-11 06:16:21] -rw-r--r-- 2 boinc boinc 222526274 Jan 11 04:34 ATLAS.root_0
[2026-01-11 06:16:21] -rw-r--r-- 2 boinc boinc    592395 Jan 11 04:34 input.tar.gz
[2026-01-11 06:16:21] -rw-r--r-- 2 boinc boinc     15847 Jan 11 04:34 start_atlas.sh
[2026-01-11 06:16:21] -rw------- 1 boinc boinc 222637340 Jan 11 06:14 HITS.pool.root.1
[2026-01-11 06:16:21] -rw------- 1 boinc boinc   1198080 Jan 11 06:16 result.tar.gz
06:16:22 (276997): run_atlas exited; CPU time 23305.028343
06:16:22 (276997): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN