Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
18:19:53 (15535): wrapper (7.7.26015): starting
18:19:53 (15535): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:19:53] Arguments: --nthreads 8
[2026-01-09 18:19:53] Threads: 8
[2026-01-09 18:19:53] Checking for CVMFS
[2026-01-09 18:19:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:19:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:19:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:19:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:19:53] 2.11.2.0 26356 171593 138216 154961 0 96 14968842 18432001 1859 130560 0 116380296 99.979 6832105 25431 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:19:53] CVMFS is ok
[2026-01-09 18:19:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:19:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:19:53] Further information can be found at the LHC@home message board.
[2026-01-09 18:19:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:19:53] Checking for apptainer binary...
[2026-01-09 18:19:53] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:19:53] Running /usr/bin/apptainer --version
[2026-01-09 18:19:53] apptainer version 1.3.2-1.el7
[2026-01-09 18:19:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:19:54] c-206-6.aglt2.org
[2026-01-09 18:19:54] apptainer works
[2026-01-09 18:19:54] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:19:54] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:19:54] Starting ATLAS job with PandaID=6963189508
[2026-01-09 18:19:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:49:38]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:49:38] 2026-01-10 03:48:52,530 | INFO     | time since job start (16126s) is within the limit (349056.0s)
[2026-01-09 22:49:38] 2026-01-10 03:48:53,155 | WARNING  | process 25811 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 22:49:38] 2026-01-10 03:48:53,156 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963189508/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:49:38] 2026-01-10 03:48:53,329 | INFO     | number of running child processes to parent process 25811: 1
[2026-01-09 22:49:38] 2026-01-10 03:48:53,329 | INFO     | maximum number of monitored processes: 6
[2026-01-09 22:49:38] 2026-01-10 03:48:53,603 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 22:49:38] 2026-01-10 03:48:53,613 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2433.5
[2026-01-09 22:49:38] 2026-01-10 03:48:53,616 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963189508/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:49:38] 2026-01-10 03:48:53,617 | INFO     | extracted standard info from prmon json
[2026-01-09 22:49:38] 2026-01-10 03:48:53,617 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:49:38] 2026-01-10 03:48:53,617 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:49:38] 2026-01-10 03:48:53,617 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:49:38] 2026-01-10 03:48:53,618 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:49:38] 2026-01-10 03:48:53,621 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:49:38] 2026-01-10 03:48:53,622 | INFO     | sum of square deviations: 5705372090.0
[2026-01-09 22:49:38] 2026-01-10 03:48:53,623 | INFO     | sum of deviations: -26401037290.000027
[2026-01-09 22:49:38] 2026-01-10 03:48:53,624 | INFO     | mean x: 1768008852.5
[2026-01-09 22:49:38] 2026-01-10 03:48:53,624 | INFO     | mean y: 2532555.0833333335
[2026-01-09 22:49:38] 2026-01-10 03:48:53,624 | INFO     | intersect: 8183816248.344198
[2026-01-09 22:49:38] 2026-01-10 03:48:53,624 | INFO     | chi2: 1.6554930031089699
[2026-01-09 22:49:38] 2026-01-10 03:48:53,625 | INFO     | sum of square deviations: 5387301010.0
[2026-01-09 22:49:38] 2026-01-10 03:48:53,626 | INFO     | sum of deviations: -25835555517.000004
[2026-01-09 22:49:38] 2026-01-10 03:48:53,627 | INFO     | mean x: 1768008700.0
[2026-01-09 22:49:38] 2026-01-10 03:48:53,627 | INFO     | mean y: 2532826.250965251
[2026-01-09 22:49:38] 2026-01-10 03:48:53,627 | INFO     | intersect: 8481265839.053048
[2026-01-09 22:49:38] 2026-01-10 03:48:53,627 | INFO     | chi2: 1.6540132222037343
[2026-01-09 22:49:38] 2026-01-10 03:48:53,627 | INFO     | current chi2=1.6540132222037343 (change=0.08938611654997076 %)
[2026-01-09 22:49:38] 2026-01-10 03:48:53,627 | INFO     | right removable region: 258
[2026-01-09 22:49:38] 2026-01-10 03:48:53,628 | INFO     | sum of square deviations: 5387301010.0
[2026-01-09 22:49:38] 2026-01-10 03:48:53,629 | INFO     | sum of deviations: -65570708711.000015
[2026-01-09 22:49:38] 2026-01-10 03:48:53,630 | INFO     | mean x: 1768009005.0
[2026-01-09 22:49:38] 2026-01-10 03:48:53,630 | INFO     | mean y: 2551170.5366795366
[2026-01-09 22:49:38] 2026-01-10 03:48:53,630 | INFO     | intersect: 21521601851.033176
[2026-01-09 22:49:38] 2026-01-10 03:48:53,630 | INFO     | chi2: 0.25572200014817253
[2026-01-09 22:49:38] 2026-01-10 03:48:53,630 | INFO     | current chi2=0.25572200014817253 (change=84.55312105409483 %)
[2026-01-09 22:49:38] 2026-01-10 03:48:53,631 | INFO     | sum of square deviations: 5081276667.5
[2026-01-09 22:49:38] 2026-01-10 03:48:53,632 | INFO     | sum of deviations: -65499248430.99999
[2026-01-09 22:49:38] 2026-01-10 03:48:53,633 | INFO     | mean x: 1768009157.5
[2026-01-09 22:49:38] 2026-01-10 03:48:53,633 | INFO     | mean y: 2551108.527559055
[2026-01-09 22:49:38] 2026-01-10 03:48:53,633 | INFO     | intersect: 22792743143.544415
[2026-01-09 22:49:38] 2026-01-10 03:48:53,633 | INFO     | chi2: 0.23706368961929197
[2026-01-09 22:49:38] 2026-01-10 03:48:53,634 | INFO     | current chi2=0.23706368961929197 (change=7.2963259000279255 %)
[2026-01-09 22:49:38] 2026-01-10 03:48:53,634 | INFO     | left removable region: 20
[2026-01-09 22:49:38] 2026-01-10 03:48:53,634 | INFO     | sum of square deviations: 4180243959.5
[2026-01-09 22:49:38] 2026-01-10 03:48:53,635 | INFO     | sum of deviations: -49623385076.00001
[2026-01-09 22:49:38] 2026-01-10 03:48:53,636 | INFO     | mean x: 1768009279.5
[2026-01-09 22:49:38] 2026-01-10 03:48:53,636 | INFO     | mean y: 2543912.1848739497
[2026-01-09 22:49:38] 2026-01-10 03:48:53,636 | INFO     | intersect: 20990459006.27517
[2026-01-09 22:49:38] 2026-01-10 03:48:53,637 | INFO     | chi2: 0.21904639342547066
[2026-01-09 22:49:38] 2026-01-10 03:48:53,637 | INFO     | current memory leak: -11.87 B/s (using 238 data points, chi2=0.22)
[2026-01-09 22:49:38] 2026-01-10 03:48:53,637 | INFO     | could have reported an average CPU frequency of 2579 MHz (12 samples)
[2026-01-09 22:49:38] 2026-01-10 03:48:53,638 | INFO     | ..............................
[2026-01-09 22:49:38] 2026-01-10 03:48:53,638 | INFO     | . Timing measurements:
[2026-01-09 22:49:38] 2026-01-10 03:48:53,638 | INFO     | . get job = 0 s
[2026-01-09 22:49:38] 2026-01-10 03:48:53,638 | INFO     | . initial setup = 2 s
[2026-01-09 22:49:38] 2026-01-10 03:48:53,638 | INFO     | . payload setup = 4 s
[2026-01-09 22:49:38] 2026-01-10 03:48:53,638 | INFO     | . stage-in = 0 s
[2026-01-09 22:49:38] 2026-01-10 03:48:53,638 | INFO     | . payload execution = 16097 s
[2026-01-09 22:49:38] 2026-01-10 03:48:53,638 | INFO     | . stage-out = 2 s
[2026-01-09 22:49:38] 2026-01-10 03:48:53,638 | INFO     | . log creation = 0 s
[2026-01-09 22:49:38] 2026-01-10 03:48:53,638 | INFO     | ..............................
[2026-01-09 22:49:38] 2026-01-10 03:48:53,767 | INFO     | 
[2026-01-09 22:49:38] 2026-01-10 03:48:53,767 | INFO     | job summary report
[2026-01-09 22:49:38] 2026-01-10 03:48:53,767 | INFO     | --------------------------------------------------
[2026-01-09 22:49:38] 2026-01-10 03:48:53,768 | INFO     | PanDA job id: 6963189508
[2026-01-09 22:49:38] 2026-01-10 03:48:53,768 | INFO     | task id: 47898826
[2026-01-09 22:49:38] 2026-01-10 03:48:53,768 | INFO     | errors: (none)
[2026-01-09 22:49:38] 2026-01-10 03:48:53,768 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:49:38] 2026-01-10 03:48:53,769 | INFO     | pilot state: finished 
[2026-01-09 22:49:38] 2026-01-10 03:48:53,769 | INFO     | transexitcode: 0
[2026-01-09 22:49:38] 2026-01-10 03:48:53,769 | INFO     | exeerrorcode: 0
[2026-01-09 22:49:38] 2026-01-10 03:48:53,769 | INFO     | exeerrordiag: 
[2026-01-09 22:49:38] 2026-01-10 03:48:53,770 | INFO     | exitcode: 0
[2026-01-09 22:49:38] 2026-01-10 03:48:53,770 | INFO     | exitmsg: OK
[2026-01-09 22:49:38] 2026-01-10 03:48:53,770 | INFO     | cpuconsumptiontime: 122307 s
[2026-01-09 22:49:38] 2026-01-10 03:48:53,770 | INFO     | nevents: 400
[2026-01-09 22:49:38] 2026-01-10 03:48:53,771 | INFO     | neventsw: 0
[2026-01-09 22:49:38] 2026-01-10 03:48:53,771 | INFO     | pid: 25811
[2026-01-09 22:49:38] 2026-01-10 03:48:53,771 | INFO     | pgrp: 25811
[2026-01-09 22:49:38] 2026-01-10 03:48:53,771 | INFO     | corecount: 8
[2026-01-09 22:49:38] 2026-01-10 03:48:53,772 | INFO     | event service: False
[2026-01-09 22:49:38] 2026-01-10 03:48:53,772 | INFO     | sizes: {0: 2283742, 1: 2283997, 2: 2283997, 5: 2284287, 12: 2284343, 16105: 2315702, 16108: 2324756, 16112: 2324894}
[2026-01-09 22:49:38] 2026-01-10 03:48:53,772 | INFO     | --------------------------------------------------
[2026-01-09 22:49:38] 2026-01-10 03:48:53,773 | INFO     | 
[2026-01-09 22:49:38] 2026-01-10 03:48:53,773 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-09 22:49:38] 2026-01-10 03:48:53,800 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,801 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,801 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,801 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,801 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,801 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,802 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,802 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,802 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,802 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,802 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,802 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,803 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,803 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,803 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,803 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,803 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,804 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:49:38] 2026-01-10 03:48:53,804 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,804 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:49:38] 2026-01-10 03:48:53,804 | INFO     | job 6963189508 has completed (purged errors)
[2026-01-09 22:49:38] 2026-01-10 03:48:53,804 | INFO     | overall cleanup function is called
[2026-01-09 22:49:38] 2026-01-10 03:48:53,898 | INFO     | PID=19325 has CPU usage=12.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 22:49:38] 2026-01-10 03:48:53,898 | INFO     | .. there are 3 such processes running
[2026-01-09 22:49:38] 2026-01-10 03:48:54,813 | INFO     | --- collectZombieJob: --- 10, [25811]
[2026-01-09 22:49:38] 2026-01-10 03:48:54,814 | INFO     | zombie collector waiting for pid 25811
[2026-01-09 22:49:38] 2026-01-10 03:48:54,814 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:49:38] 2026-01-10 03:48:54,814 | INFO     | collected zombie processes
[2026-01-09 22:49:38] 2026-01-10 03:48:54,814 | INFO     | will attempt to kill all subprocesses of pid=25811
[2026-01-09 22:49:38] 2026-01-10 03:48:54,986 | INFO     | process IDs to be killed: [25811] (in reverse order)
[2026-01-09 22:49:38] 2026-01-10 03:48:55,038 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:49:38] 2026-01-10 03:48:55,038 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:49:38] 2026-01-10 03:48:55,041 | INFO     | did not find any defunct processes belonging to 25811
[2026-01-09 22:49:38] 2026-01-10 03:48:55,043 | INFO     | did not find any defunct processes belonging to 25811
[2026-01-09 22:49:38] 2026-01-10 03:48:55,044 | INFO     | ready for new job
[2026-01-09 22:49:38] 2026-01-10 03:48:55,044 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:49:38] 2026-01-10 03:48:55,045 | INFO     | ***************************************
[2026-01-09 22:49:38] 2026-01-10 03:48:55,045 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:49:38] 2026-01-10 03:48:55,046 | INFO     | ***************************************
[2026-01-09 22:49:38] 2026-01-10 03:48:55,046 | INFO     | 
[2026-01-09 22:49:38] 2026-01-10 03:48:55,046 | INFO     | architecture information:
[2026-01-09 22:49:38] 2026-01-10 03:48:55,047 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:49:38] 2026-01-10 03:48:55,058 | INFO     | cat /etc/os-release:
[2026-01-09 22:49:38] NAME="CentOS Linux"
[2026-01-09 22:49:38] VERSION="7 (Core)"
[2026-01-09 22:49:38] ID="centos"
[2026-01-09 22:49:38] ID_LIKE="rhel fedora"
[2026-01-09 22:49:38] VERSION_ID="7"
[2026-01-09 22:49:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:49:38] ANSI_COLOR="0;31"
[2026-01-09 22:49:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:49:38] HOME_URL="https://www.centos.org/"
[2026-01-09 22:49:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:49:38] 
[2026-01-09 22:49:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:49:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:49:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:49:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:49:38] 
[2026-01-09 22:49:38] 2026-01-10 03:48:55,058 | INFO     | ***************************************
[2026-01-09 22:49:38] 2026-01-10 03:48:55,561 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-09 22:49:38] 2026-01-10 03:48:55,579 | INFO     | sufficient remaining disk space (27240955904 B)
[2026-01-09 22:49:38] 2026-01-10 03:48:55,579 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:49:38] 2026-01-10 03:48:55,580 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:49:38] 2026-01-10 03:48:55,580 | INFO     | update_server=False
[2026-01-09 22:49:38] 2026-01-10 03:48:55,580 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:49:38] 2026-01-10 03:48:55,580 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:49:38] 2026-01-10 03:48:55,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:49:38] 2026-01-10 03:48:55,694 | INFO     | all data control threads have been joined
[2026-01-09 22:49:38] 2026-01-10 03:48:55,832 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 22:49:38] 2026-01-10 03:48:55,832 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 22:49:38] 2026-01-10 03:48:55,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:49:38] 2026-01-10 03:48:55,832 | INFO     | will abort loop
[2026-01-09 22:49:38] 2026-01-10 03:48:55,839 | INFO     | all payload control threads have been joined
[2026-01-09 22:49:38] 2026-01-10 03:48:56,039 | INFO     | all job control threads have been joined
[2026-01-09 22:49:38] 2026-01-10 03:48:56,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:49:38] 2026-01-10 03:48:56,582 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:48:56,584 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:48:56,692 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:48:56,700 | INFO     | [data] control thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:48:56,838 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:48:56,844 | INFO     | [payload] control thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:48:56,920 | INFO     | [job] validate thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:48:56,972 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:48:57,044 | INFO     | [job] control thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:48:57,200 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:48:57,464 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:48:57,464 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:48:57,686 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:48:57,959 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:48:57,966 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:49:00,347 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:49:38] 2026-01-10 03:49:26,114 | INFO     | PID=19325 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-09 22:49:38] 2026-01-10 03:49:26,114 | INFO     | .. there are 3 such processes running
[2026-01-09 22:49:38] 2026-01-10 03:49:26,115 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:49:38] 2026-01-10 03:49:26,115 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:49:38] 2026-01-10 03:49:26,116 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:49:38] 2026-01-10 03:49:32,061 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:49:38] 2026-01-10 03:49:33,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140171032856384)>', '<ExcThread(monitor, started 140170577815296)>']
[2026-01-09 22:49:38] 2026-01-10 03:49:34,147 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:49:38] 2026-01-10 03:49:34,147 | INFO     | [monitor] control thread has ended
[2026-01-09 22:49:38] 2026-01-10 03:49:38,291 | INFO     | all workflow threads have been joined
[2026-01-09 22:49:38] 2026-01-10 03:49:38,291 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:49:38] 2026-01-10 03:49:38,291 | INFO     | traces error code: 0
[2026-01-09 22:49:38] 2026-01-10 03:49:38,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:49:38] 2026-01-10 03:49:38,394 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:49:38] 2026-01-10 03:49:38,396 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:49:38] 2026-01-10 03:49:38,399 [wrapper] pilotpid: 19325
[2026-01-09 22:49:38] 2026-01-10 03:49:38,402 [wrapper] Pilot exit status: 0
[2026-01-09 22:49:38] 2026-01-10 03:49:38,413 [wrapper] pandaids: 6963189508
[2026-01-09 22:49:38] 2026-01-10 03:49:38,453 [wrapper] cleanup supervisor_pilot  9611 19326
[2026-01-09 22:49:38] 2026-01-10 03:49:38,457 [wrapper] Test setup, not cleaning
[2026-01-09 22:49:38] 2026-01-10 03:49:38,460 [wrapper] apfmon messages muted
[2026-01-09 22:49:38] 2026-01-10 03:49:38,462 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:49:38] 2026-01-10 03:49:38,465 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:49:38]  *** Error codes and diagnostics ***
[2026-01-09 22:49:38]     "exeErrorCode": 0,
[2026-01-09 22:49:38]     "exeErrorDiag": "",
[2026-01-09 22:49:38]     "pilotErrorCode": 0,
[2026-01-09 22:49:38]     "pilotErrorDiag": "",
[2026-01-09 22:49:38]  *** Listing of results directory ***
[2026-01-09 22:49:38] total 446016
[2026-01-09 22:49:38] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 22:49:38] -rwx------ 1 boincer umatlas     36322 Jan  8 23:25 runpilot2-wrapper.sh
[2026-01-09 22:49:38] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 23:30 queuedata.json
[2026-01-09 22:49:38] -rw-r--r-- 1 boincer umatlas       100 Jan  9 18:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:49:38] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 18:19 run_atlas
[2026-01-09 22:49:38] -rw-r--r-- 1 boincer umatlas       105 Jan  9 18:19 job.xml
[2026-01-09 22:49:38] -rw-r--r-- 2 boincer umatlas 223725975 Jan  9 18:19 EVNT.47898824._001474.pool.root.1
[2026-01-09 22:49:38] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 18:19 input.tar.gz
[2026-01-09 22:49:38] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:19 start_atlas.sh
[2026-01-09 22:49:38] drwxrwx--x 2 boincer umatlas      4096 Jan  9 18:19 shared
[2026-01-09 22:49:38] -rw-r--r-- 1 boincer umatlas         0 Jan  9 18:19 boinc_lockfile
[2026-01-09 22:49:38] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 18:19 pandaJob.out
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas        57 Jan  9 18:19 setup.sh.local
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas    989374 Jan  9 18:20 agis_schedconf.cvmfs.json
[2026-01-09 22:49:38] drwx------ 5 boincer umatlas      4096 Jan  9 18:20 pilot3
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas 223667078 Jan  9 22:48 HITS.47898826._038377.pool.root.1
[2026-01-09 22:49:38] -rw-r--r-- 1 boincer umatlas       532 Jan  9 22:48 boinc_task_state.xml
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas      1064 Jan  9 22:48 memory_monitor_summary.json
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas   1516240 Jan  9 22:48 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas    473586 Jan  9 22:48 log.47898826._038377.job.log.tgz.1
[2026-01-09 22:49:38] -rw-r--r-- 1 boincer umatlas      5952 Jan  9 22:48 init_data.xml
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas      7855 Jan  9 22:48 heartbeat.json
[2026-01-09 22:49:38] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 22:49 boinc_mmap_file
[2026-01-09 22:49:38] -rw-r--r-- 1 boincer umatlas        29 Jan  9 22:49 wrapper_checkpoint.txt
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas        95 Jan  9 22:49 pilot_heartbeat.json
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas      5007 Jan  9 22:49 pilotlog.txt
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas   2232789 Jan  9 22:49 log.47898826._038377.job.log.1
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas       357 Jan  9 22:49 output.list
[2026-01-09 22:49:38] -rw-r--r-- 1 boincer umatlas       620 Jan  9 22:49 runtime_log
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas   2723840 Jan  9 22:49 result.tar.gz
[2026-01-09 22:49:38] -rw-r--r-- 1 boincer umatlas      9338 Jan  9 22:49 runtime_log.err
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas       662 Jan  9 22:49 ESLLDmMFJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWMmKDmTMkpan.diag
[2026-01-09 22:49:38] -rw-r--r-- 1 boincer umatlas     21373 Jan  9 22:49 stderr.txt
[2026-01-09 22:49:38] HITS file was successfully produced:
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas 223667078 Jan  9 22:48 shared/HITS.pool.root.1
[2026-01-09 22:49:38]  *** Contents of shared directory: ***
[2026-01-09 22:49:38] total 440172
[2026-01-09 22:49:38] -rw-r--r-- 2 boincer umatlas 223725975 Jan  9 18:19 ATLAS.root_0
[2026-01-09 22:49:38] -rw-r--r-- 2 boincer umatlas    592397 Jan  9 18:19 input.tar.gz
[2026-01-09 22:49:38] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 18:19 start_atlas.sh
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas 223667078 Jan  9 22:48 HITS.pool.root.1
[2026-01-09 22:49:38] -rw------- 1 boincer umatlas   2723840 Jan  9 22:49 result.tar.gz
22:49:40 (15535): run_atlas exited; CPU time 122532.112860
22:49:40 (15535): called boinc_finish(0)

</stderr_txt>
]]>

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