Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:04:06 (3803766): wrapper (7.7.26015): starting
20:04:06 (3803766): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 20:04:06] Arguments: --nthreads 9
[2026-01-09 20:04:06] Threads: 9
[2026-01-09 20:04:06] Checking for CVMFS
[2026-01-09 20:04:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:04:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:04:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:04:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:04:30] 2.13.3.0 13037 30833 286840 154962 0 68 26622791 32935937 18290 16776704 0 29326447 99.606 28960609 13769 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 20:04:30] CVMFS is ok
[2026-01-09 20:04:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:04:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:04:30] Further information can be found at the LHC@home message board.
[2026-01-09 20:04:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:04:30] Checking for apptainer binary...
[2026-01-09 20:04:30] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:04:30] Running /usr/bin/apptainer --version
[2026-01-09 20:04:30] apptainer version 1.4.5-2.el9
[2026-01-09 20:04:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:04:31] c6-12-25-3.aglt2.org
[2026-01-09 20:04:31] apptainer works
[2026-01-09 20:04:31] Set ATHENA_PROC_NUMBER=9
[2026-01-09 20:04:31] Set ATHENA_CORE_NUMBER=9
[2026-01-09 20:04:32] Starting ATLAS job with PandaID=6963157701
[2026-01-09 20:04:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 19:52:13]  *** The last 200 lines of the pilot log: ***
[2026-01-10 19:52:13] 2026-01-11 00:50:53,872 | INFO     | monitor loop #3237: job 0:6963157701 is in state 'finished'
[2026-01-10 19:52:13] 2026-01-11 00:50:53,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:52:13] 2026-01-11 00:50:54,226 | INFO     | fitting pss+swap vs Time
[2026-01-10 19:52:13] 2026-01-11 00:50:54,253 | INFO     | sum of square deviations: 845417175265.0593
[2026-01-10 19:52:13] 2026-01-11 00:50:54,552 | INFO     | time since job start (85474s) is within the limit (349056.0s)
[2026-01-10 19:52:13] 2026-01-11 00:50:54,553 | INFO     | 85489s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 19:52:13] 2026-01-11 00:50:54,939 | INFO     | sum of deviations: 1430523932178.9402
[2026-01-10 19:52:13] 2026-01-11 00:50:54,940 | INFO     | mean x: 1768049992.5934145
[2026-01-10 19:52:13] 2026-01-11 00:50:54,940 | INFO     | mean y: 2522991.66714388
[2026-01-10 19:52:13] 2026-01-11 00:50:54,940 | INFO     | intersect: -2989180869.6847367
[2026-01-10 19:52:13] 2026-01-11 00:50:54,967 | INFO     | chi2: 11.062450004865866
[2026-01-10 19:52:13] 2026-01-11 00:50:54,992 | INFO     | sum of square deviations: 836372884592.3193
[2026-01-10 19:52:13] 2026-01-11 00:50:55,661 | INFO     | sum of deviations: 1877016130483.218
[2026-01-10 19:52:13] 2026-01-11 00:50:55,662 | INFO     | mean x: 1768049840.099138
[2026-01-10 19:52:13] 2026-01-11 00:50:55,662 | INFO     | mean y: 2530519.933189655
[2026-01-10 19:52:13] 2026-01-11 00:50:55,685 | INFO     | intersect: -3965386339.282062
[2026-01-10 19:52:13] 2026-01-11 00:50:55,711 | INFO     | chi2: 7.57312380462831
[2026-01-10 19:52:13] 2026-01-11 00:50:55,711 | INFO     | current chi2=7.57312380462831 (change=31.542074302733674 %)
[2026-01-10 19:52:13] 2026-01-11 00:50:55,736 | INFO     | sum of square deviations: 827392914764.5181
[2026-01-10 19:52:13] 2026-01-11 00:50:56,380 | INFO     | sum of deviations: 1958244602346.646
[2026-01-10 19:52:13] 2026-01-11 00:50:56,380 | INFO     | mean x: 1768049687.6012979
[2026-01-10 19:52:13] 2026-01-11 00:50:56,381 | INFO     | mean y: 2531894.9740447006
[2026-01-10 19:52:13] 2026-01-11 00:50:56,381 | INFO     | intersect: -4182026246.19798
[2026-01-10 19:52:13] 2026-01-11 00:50:56,424 | INFO     | chi2: 6.8734367680453605
[2026-01-10 19:52:13] 2026-01-11 00:50:56,425 | INFO     | current chi2=6.8734367680453605 (change=9.239080921341017 %)
[2026-01-10 19:52:13] 2026-01-11 00:50:56,425 | INFO     | right removable region: 1386
[2026-01-10 19:52:13] 2026-01-11 00:50:56,434 | INFO     | sum of square deviations: 836371611829.5162
[2026-01-10 19:52:13] 2026-01-11 00:50:56,474 | INFO     | monitor loop #3238: job 0:6963157701 is in state 'finished'
[2026-01-10 19:52:13] 2026-01-11 00:50:56,474 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 19:52:13] 2026-01-11 00:50:56,588 | INFO     | time since job start (85476s) is within the limit (349056.0s)
[2026-01-10 19:52:13] 2026-01-11 00:50:56,845 | INFO     | sum of deviations: 990428448687.1307
[2026-01-10 19:52:13] 2026-01-11 00:50:56,846 | INFO     | mean x: 1768050145.0984194
[2026-01-10 19:52:13] 2026-01-11 00:50:56,846 | INFO     | mean y: 2530409.6048850575
[2026-01-10 19:52:13] 2026-01-11 00:50:56,846 | INFO     | intersect: -2091188623.4698875
[2026-01-10 19:52:13] 2026-01-11 00:50:56,851 | INFO     | chi2: 7.6249851338392745
[2026-01-10 19:52:13] 2026-01-11 00:50:56,851 | INFO     | current chi2=7.6249851338392745 (change=31.07326920812847 %)
[2026-01-10 19:52:13] 2026-01-11 00:50:56,856 | INFO     | sum of square deviations: 827390963988.3137
[2026-01-10 19:52:13] 2026-01-11 00:50:57,131 | INFO     | sum of deviations: 658916479193.208
[2026-01-10 19:52:13] 2026-01-11 00:50:57,132 | INFO     | mean x: 1768050297.6020188
[2026-01-10 19:52:13] 2026-01-11 00:50:57,132 | INFO     | mean y: 2536038.7829848593
[2026-01-10 19:52:13] 2026-01-11 00:50:57,132 | INFO     | intersect: -1405501428.1923983
[2026-01-10 19:52:13] 2026-01-11 00:50:57,147 | INFO     | chi2: 5.749617642443094
[2026-01-10 19:52:13] 2026-01-11 00:50:57,147 | INFO     | current chi2=5.749617642443094 (change=24.595031445679812 %)
[2026-01-10 19:52:13] 2026-01-11 00:50:57,158 | INFO     | left removable region: 20
[2026-01-10 19:52:13] 2026-01-11 00:50:57,174 | INFO     | sum of square deviations: 790376266654.9557
[2026-01-10 19:52:13] 2026-01-11 00:50:57,489 | INFO     | sum of deviations: 863616455169.3596
[2026-01-10 19:52:13] 2026-01-11 00:50:57,489 | INFO     | mean x: 1768050267.1149342
[2026-01-10 19:52:13] 2026-01-11 00:50:57,490 | INFO     | mean y: 2550721.2715959004
[2026-01-10 19:52:13] 2026-01-11 00:50:57,490 | INFO     | intersect: -1929335860.6842172
[2026-01-10 19:52:13] 2026-01-11 00:50:57,495 | INFO     | chi2: 0.5598839433971602
[2026-01-10 19:52:13] 2026-01-11 00:50:57,495 | INFO     | current memory leak: 1.09 B/s (using 1366 data points, chi2=0.56)
[2026-01-10 19:52:13] 2026-01-11 00:50:57,498 | INFO     | could have reported an average CPU frequency of 999 MHz (49 samples)
[2026-01-10 19:52:13] 2026-01-11 00:50:57,498 | INFO     | ..............................
[2026-01-10 19:52:13] 2026-01-11 00:50:57,498 | INFO     | . Timing measurements:
[2026-01-10 19:52:13] 2026-01-11 00:50:57,499 | INFO     | . get job = 0 s
[2026-01-10 19:52:13] 2026-01-11 00:50:57,499 | INFO     | . initial setup = 14 s
[2026-01-10 19:52:13] 2026-01-11 00:50:57,499 | INFO     | . payload setup = 67 s
[2026-01-10 19:52:13] 2026-01-11 00:50:57,499 | INFO     | . stage-in = 0 s
[2026-01-10 19:52:13] 2026-01-11 00:50:57,499 | INFO     | . payload execution = 85204 s
[2026-01-10 19:52:13] 2026-01-11 00:50:57,500 | INFO     | . stage-out = 15 s
[2026-01-10 19:52:13] 2026-01-11 00:50:57,500 | INFO     | . log creation = 5 s
[2026-01-10 19:52:13] 2026-01-11 00:50:57,500 | INFO     | ..............................
[2026-01-10 19:52:13] 2026-01-11 00:50:58,098 | INFO     | 
[2026-01-10 19:52:13] 2026-01-11 00:50:58,098 | INFO     | job summary report
[2026-01-10 19:52:13] 2026-01-11 00:50:58,099 | INFO     | --------------------------------------------------
[2026-01-10 19:52:13] 2026-01-11 00:50:58,099 | INFO     | PanDA job id: 6963157701
[2026-01-10 19:52:13] 2026-01-11 00:50:58,099 | INFO     | task id: 47898826
[2026-01-10 19:52:13] 2026-01-11 00:50:58,099 | INFO     | errors: (none)
[2026-01-10 19:52:13] 2026-01-11 00:50:58,099 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 19:52:13] 2026-01-11 00:50:58,100 | INFO     | pilot state: finished 
[2026-01-10 19:52:13] 2026-01-11 00:50:58,100 | INFO     | transexitcode: 0
[2026-01-10 19:52:13] 2026-01-11 00:50:58,100 | INFO     | exeerrorcode: 0
[2026-01-10 19:52:13] 2026-01-11 00:50:58,100 | INFO     | exeerrordiag: 
[2026-01-10 19:52:13] 2026-01-11 00:50:58,100 | INFO     | exitcode: 0
[2026-01-10 19:52:13] 2026-01-11 00:50:58,101 | INFO     | exitmsg: OK
[2026-01-10 19:52:13] 2026-01-11 00:50:58,101 | INFO     | cpuconsumptiontime: 158742 s
[2026-01-10 19:52:13] 2026-01-11 00:50:58,101 | INFO     | nevents: 400
[2026-01-10 19:52:13] 2026-01-11 00:50:58,101 | INFO     | neventsw: 0
[2026-01-10 19:52:13] 2026-01-11 00:50:58,101 | INFO     | pid: 3819245
[2026-01-10 19:52:13] 2026-01-11 00:50:58,122 | INFO     | pgrp: 3819245
[2026-01-10 19:52:13] 2026-01-11 00:50:58,122 | INFO     | corecount: 9
[2026-01-10 19:52:13] 2026-01-11 00:50:58,123 | INFO     | event service: False
[2026-01-10 19:52:13] 2026-01-11 00:50:58,123 | INFO     | sizes: {0: 2283143, 2: 2283744, 4: 2283828, 7: 2283884, 9: 2283884, 10: 2284211, 23: 2284211, 35: 2284239, 46: 2284267, 58: 2284557, 69: 2284585, 85280: 2343690, 8
[2026-01-10 19:52:13] 2026-01-11 00:50:58,123 | INFO     | --------------------------------------------------
[2026-01-10 19:52:13] 2026-01-11 00:50:58,123 | INFO     | 
[2026-01-10 19:52:13] 2026-01-11 00:50:58,124 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 19:52:13] 2026-01-11 00:50:58,329 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,330 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,330 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,331 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,331 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,331 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,331 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,332 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,332 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,332 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,332 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,347 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,347 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,348 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,348 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,348 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,348 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,349 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 19:52:13] 2026-01-11 00:50:58,349 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,349 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 19:52:13] 2026-01-11 00:50:58,350 | INFO     | job 6963157701 has completed (purged errors)
[2026-01-10 19:52:13] 2026-01-11 00:50:58,350 | INFO     | overall cleanup function is called
[2026-01-10 19:52:13] 2026-01-11 00:50:59,383 | INFO     | --- collectZombieJob: --- 10, [3819245]
[2026-01-10 19:52:13] 2026-01-11 00:50:59,383 | INFO     | zombie collector waiting for pid 3819245
[2026-01-10 19:52:13] 2026-01-11 00:50:59,383 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 19:52:13] 2026-01-11 00:50:59,384 | INFO     | collected zombie processes
[2026-01-10 19:52:13] 2026-01-11 00:50:59,384 | INFO     | will attempt to kill all subprocesses of pid=3819245
[2026-01-10 19:52:13] 2026-01-11 00:51:03,605 | INFO     | process IDs to be killed: [3819245] (in reverse order)
[2026-01-10 19:52:13] 2026-01-11 00:51:04,876 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 19:52:13] 2026-01-11 00:51:04,877 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 19:52:13] 2026-01-11 00:51:05,059 | INFO     | did not find any defunct processes belonging to 3819245
[2026-01-10 19:52:13] 2026-01-11 00:51:05,255 | INFO     | did not find any defunct processes belonging to 3819245
[2026-01-10 19:52:13] 2026-01-11 00:51:05,256 | INFO     | ready for new job
[2026-01-10 19:52:13] 2026-01-11 00:51:05,256 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 19:52:13] 2026-01-11 00:51:05,333 | INFO     | ***************************************
[2026-01-10 19:52:13] 2026-01-11 00:51:05,334 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 19:52:13] 2026-01-11 00:51:05,334 | INFO     | ***************************************
[2026-01-10 19:52:13] 2026-01-11 00:51:05,334 | INFO     | 
[2026-01-10 19:52:13] 2026-01-11 00:51:05,422 | INFO     | architecture information:
[2026-01-10 19:52:13] 2026-01-11 00:51:05,433 | INFO     | executing command: cat /etc/os-release
[2026-01-10 19:52:13] 2026-01-11 00:51:05,601 | INFO     | cat /etc/os-release:
[2026-01-10 19:52:13] NAME="CentOS Linux"
[2026-01-10 19:52:13] VERSION="7 (Core)"
[2026-01-10 19:52:13] ID="centos"
[2026-01-10 19:52:13] ID_LIKE="rhel fedora"
[2026-01-10 19:52:13] VERSION_ID="7"
[2026-01-10 19:52:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 19:52:13] ANSI_COLOR="0;31"
[2026-01-10 19:52:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 19:52:13] HOME_URL="https://www.centos.org/"
[2026-01-10 19:52:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 19:52:13] 
[2026-01-10 19:52:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 19:52:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 19:52:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 19:52:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 19:52:13] 
[2026-01-10 19:52:13] 2026-01-11 00:51:05,602 | INFO     | ***************************************
[2026-01-10 19:52:13] 2026-01-11 00:51:06,106 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 19:52:13] 2026-01-11 00:51:06,281 | INFO     | sufficient remaining disk space (94613012480 B)
[2026-01-10 19:52:13] 2026-01-11 00:51:06,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 19:52:13] 2026-01-11 00:51:06,283 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 19:52:13] 2026-01-11 00:51:06,283 | INFO     | update_server=False
[2026-01-10 19:52:13] 2026-01-11 00:51:06,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 19:52:13] 2026-01-11 00:51:06,337 | INFO     | all job control threads have been joined
[2026-01-10 19:52:13] 2026-01-11 00:51:06,651 | INFO     | all payload control threads have been joined
[2026-01-10 19:52:13] 2026-01-11 00:51:06,706 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 19:52:13] 2026-01-11 00:51:06,706 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 19:52:13] 2026-01-11 00:51:06,707 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:52:13] 2026-01-11 00:51:06,707 | INFO     | will abort loop
[2026-01-10 19:52:13] 2026-01-11 00:51:06,843 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 19:52:13] 2026-01-11 00:51:07,080 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 19:52:13] 2026-01-11 00:51:07,290 | INFO     | [job] retrieve thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:07,343 | INFO     | [job] control thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:07,348 | INFO     | all data control threads have been joined
[2026-01-10 19:52:13] 2026-01-11 00:51:07,645 | INFO     | [payload] validate_post thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:07,656 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 19:52:13] 2026-01-11 00:51:07,659 | INFO     | [payload] control thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:07,719 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:07,728 | INFO     | [job] job monitor thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:07,789 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:07,796 | INFO     | [job] validate thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:07,802 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:07,864 | INFO     | [job] queue monitor thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:08,354 | INFO     | [data] control thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:08,661 | INFO     | [data] copytool_in thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:08,685 | INFO     | [payload] failed_post thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:08,742 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:09,087 | INFO     | [data] copytool_out thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:11,665 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 19:52:13] 2026-01-11 00:51:19,897 [wrapper] supervise_pilot (15 min periods counter: 96)
[2026-01-10 19:52:13] 2026-01-11 00:51:35,782 | INFO     | PID=3810039 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 19:52:13] 2026-01-11 00:51:35,782 | INFO     | .. there are 16 such processes running
[2026-01-10 19:52:13] 2026-01-11 00:51:35,811 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 19:52:13] 2026-01-11 00:51:35,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 19:52:13] 2026-01-11 00:51:35,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 19:52:13] 2026-01-11 00:52:03,640 | INFO     | [monitor] cgroup control has ended
[2026-01-10 19:52:13] 2026-01-11 00:52:05,624 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140518065284928)>', '<ExcThread(monitor, started 140517673252608)>']
[2026-01-10 19:52:13] 2026-01-11 00:52:06,002 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 19:52:13] 2026-01-11 00:52:06,002 | INFO     | [monitor] control thread has ended
[2026-01-10 19:52:13] 2026-01-11 00:52:10,650 | INFO     | all workflow threads have been joined
[2026-01-10 19:52:13] 2026-01-11 00:52:10,650 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 19:52:13] 2026-01-11 00:52:10,651 | INFO     | traces error code: 0
[2026-01-10 19:52:13] 2026-01-11 00:52:10,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 19:52:13] 2026-01-11 00:52:12,306 [wrapper] ==== pilot stdout END ====
[2026-01-10 19:52:13] 2026-01-11 00:52:12,350 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 19:52:13] 2026-01-11 00:52:12,388 [wrapper] pilotpid: 3810039
[2026-01-10 19:52:13] 2026-01-11 00:52:12,414 [wrapper] Pilot exit status: 0
[2026-01-10 19:52:13] 2026-01-11 00:52:12,597 [wrapper] pandaids: 6963157701
[2026-01-10 19:52:13] 2026-01-11 00:52:13,248 [wrapper] cleanup supervisor_pilot 2635797 3810040
[2026-01-10 19:52:13] 2026-01-11 00:52:13,254 [wrapper] Test setup, not cleaning
[2026-01-10 19:52:13] 2026-01-11 00:52:13,278 [wrapper] apfmon messages muted
[2026-01-10 19:52:13] 2026-01-11 00:52:13,302 [wrapper] ==== wrapper stdout END ====
[2026-01-10 19:52:13] 2026-01-11 00:52:13,327 [wrapper] ==== wrapper stderr END ====
[2026-01-10 19:52:13]  *** Error codes and diagnostics ***
[2026-01-10 19:52:13]     "exeErrorCode": 0,
[2026-01-10 19:52:13]     "exeErrorDiag": "",
[2026-01-10 19:52:13]     "pilotErrorCode": 0,
[2026-01-10 19:52:13]     "pilotErrorDiag": "",
[2026-01-10 19:52:13]  *** Listing of results directory ***
[2026-01-10 19:52:13] total 463976
[2026-01-10 19:52:13] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 16:44 pilot3.tar.gz
[2026-01-10 19:52:13] -rwx------. 1 boincer umatlas     36322 Jan  8 16:47 runpilot2-wrapper.sh
[2026-01-10 19:52:13] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 16:50 queuedata.json
[2026-01-10 19:52:13] -rw-r--r--. 1 boincer umatlas       100 Jan  9 20:04 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 19:52:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 20:04 run_atlas
[2026-01-10 19:52:13] -rw-r--r--. 1 boincer umatlas       105 Jan  9 20:04 job.xml
[2026-01-10 19:52:13] -rw-r--r--. 2 boincer umatlas 227002938 Jan  9 20:04 EVNT.47898824._001258.pool.root.1
[2026-01-10 19:52:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:04 start_atlas.sh
[2026-01-10 19:52:13] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 20:04 shared
[2026-01-10 19:52:13] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 20:04 input.tar.gz
[2026-01-10 19:52:13] -rw-r--r--. 1 boincer umatlas         0 Jan  9 20:04 boinc_lockfile
[2026-01-10 19:52:13] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 20:04 pandaJob.out
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas        57 Jan  9 20:04 setup.sh.local
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas    989374 Jan  9 20:06 agis_schedconf.cvmfs.json
[2026-01-10 19:52:13] drwx------. 5 boincer umatlas      4096 Jan  9 20:06 pilot3
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas 225964327 Jan 10 19:43 HITS.47898826._032556.pool.root.1
[2026-01-10 19:52:13] -rw-r--r--. 1 boincer umatlas       532 Jan 10 19:43 boinc_task_state.xml
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas      1036 Jan 10 19:49 memory_monitor_summary.json
[2026-01-10 19:52:13] -rw-r--r--. 1 boincer umatlas      6859 Jan 10 19:49 init_data.xml
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas   1516240 Jan 10 19:49 agis_ddmendpoints.agis.ALL.json
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas   1175457 Jan 10 19:49 log.47898826._032556.job.log.tgz.1
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas      7831 Jan 10 19:50 heartbeat.json
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas        95 Jan 10 19:51 pilot_heartbeat.json
[2026-01-10 19:52:13] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 19:52 boinc_mmap_file
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas      5010 Jan 10 19:52 pilotlog.txt
[2026-01-10 19:52:13] -rw-r--r--. 1 boincer umatlas        29 Jan 10 19:52 wrapper_checkpoint.txt
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas   7940793 Jan 10 19:52 log.47898826._032556.job.log.1
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas       357 Jan 10 19:52 output.list
[2026-01-10 19:52:13] -rw-r--r--. 1 boincer umatlas       620 Jan 10 19:52 runtime_log
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas   9134080 Jan 10 19:52 result.tar.gz
[2026-01-10 19:52:13] -rw-r--r--. 1 boincer umatlas      9353 Jan 10 19:52 runtime_log.err
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas       662 Jan 10 19:52 gH3LDmO2Cy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKZlKDm2mGpEo.diag
[2026-01-10 19:52:13] -rw-r--r--. 1 boincer umatlas     21306 Jan 10 19:52 stderr.txt
[2026-01-10 19:52:13] HITS file was successfully produced:
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas 225964327 Jan 10 19:43 shared/HITS.pool.root.1
[2026-01-10 19:52:13]  *** Contents of shared directory: ***
[2026-01-10 19:52:13] total 451876
[2026-01-10 19:52:13] -rw-r--r--. 2 boincer umatlas 227002938 Jan  9 20:04 ATLAS.root_0
[2026-01-10 19:52:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:04 start_atlas.sh
[2026-01-10 19:52:13] -rw-r--r--. 2 boincer umatlas    592403 Jan  9 20:04 input.tar.gz
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas 225964327 Jan 10 19:43 HITS.pool.root.1
[2026-01-10 19:52:13] -rw-------. 1 boincer umatlas   9134080 Jan 10 19:52 result.tar.gz
19:52:15 (3803766): run_atlas exited; CPU time 165191.272743
19:52:15 (3803766): called boinc_finish(0)

</stderr_txt>
]]>

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