Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:06:55 (27186): wrapper (7.7.26015): starting
23:06:55 (27186): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 23:06:55] Arguments: --nthreads 8
[2026-01-10 23:06:55] Threads: 8
[2026-01-10 23:06:55] Checking for CVMFS
[2026-01-10 23:06:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 23:06:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 23:06:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 23:06:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 23:06:59] 2.11.2.0 29994 37411 129016 154992 1 61 18235842 25165824 96 130560 0 13618189 99.829 8085309 3023 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 23:06:59] CVMFS is ok
[2026-01-10 23:06:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 23:06:59] Checking for apptainer binary...
[2026-01-10 23:06:59] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 23:06:59] Running /usr/bin/apptainer --version
[2026-01-10 23:06:59] apptainer version 1.3.2-1.el7
[2026-01-10 23:06:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 23:07:11] cg-vwn449.simple-grid.lan
[2026-01-10 23:07:11] apptainer works
[2026-01-10 23:07:11] Set ATHENA_PROC_NUMBER=8
[2026-01-10 23:07:11] Set ATHENA_CORE_NUMBER=8
[2026-01-10 23:07:11] Starting ATLAS job with PandaID=6963188971
[2026-01-10 23:07:11] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 05:20:28]  *** The last 200 lines of the pilot log: ***
[2026-01-11 05:20:28] 2026-01-11 04:19:30,002 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 05:20:28] 2026-01-11 04:19:30,003 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-11 05:20:28] 2026-01-11 04:19:30,005 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6963188971/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 05:20:28] 2026-01-11 04:19:30,006 | INFO     | extracted standard info from prmon json
[2026-01-11 05:20:28] 2026-01-11 04:19:30,006 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 05:20:28] 2026-01-11 04:19:30,006 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 05:20:28] 2026-01-11 04:19:30,007 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 05:20:28] 2026-01-11 04:19:30,007 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 05:20:28] 2026-01-11 04:19:30,015 | INFO     | fitting pss+swap vs Time
[2026-01-11 05:20:28] 2026-01-11 04:19:30,015 | INFO     | sum of square deviations: 13408995600.0
[2026-01-11 05:20:28] 2026-01-11 04:19:30,025 | INFO     | sum of deviations: 77406436048.00003
[2026-01-11 05:20:28] 2026-01-11 04:19:30,025 | INFO     | mean x: 1768094329.0
[2026-01-11 05:20:28] 2026-01-11 04:19:30,025 | INFO     | mean y: 2482300.301994302
[2026-01-11 05:20:28] 2026-01-11 04:19:30,025 | INFO     | intersect: -10204238970.049532
[2026-01-11 05:20:28] 2026-01-11 04:19:30,026 | INFO     | chi2: 6.484423859624438
[2026-01-11 05:20:28] 2026-01-11 04:19:30,026 | INFO     | sum of square deviations: 12844082682.5
[2026-01-11 05:20:28] 2026-01-11 04:19:30,030 | INFO     | sum of deviations: 99805688172.50002
[2026-01-11 05:20:28] 2026-01-11 04:19:30,030 | INFO     | mean x: 1768094176.5
[2026-01-11 05:20:28] 2026-01-11 04:19:30,031 | INFO     | mean y: 2488274.471098266
[2026-01-11 05:20:28] 2026-01-11 04:19:30,031 | INFO     | intersect: -13736589898.8426
[2026-01-11 05:20:28] 2026-01-11 04:19:30,031 | INFO     | chi2: 5.753909299797385
[2026-01-11 05:20:28] 2026-01-11 04:19:30,031 | INFO     | current chi2=5.753909299797385 (change=11.26568181909938 %)
[2026-01-11 05:20:28] 2026-01-11 04:19:30,032 | INFO     | right removable region: 345
[2026-01-11 05:20:28] 2026-01-11 04:19:30,032 | INFO     | sum of square deviations: 12844082682.5
[2026-01-11 05:20:28] 2026-01-11 04:19:30,039 | INFO     | sum of deviations: -45055038254.50001
[2026-01-11 05:20:28] 2026-01-11 04:19:30,040 | INFO     | mean x: 1768094481.5
[2026-01-11 05:20:28] 2026-01-11 04:19:30,040 | INFO     | mean y: 2515336.488439306
[2026-01-11 05:20:28] 2026-01-11 04:19:30,040 | INFO     | intersect: 6204714938.4959345
[2026-01-11 05:20:28] 2026-01-11 04:19:30,040 | INFO     | chi2: 1.895171269101391
[2026-01-11 05:20:28] 2026-01-11 04:19:30,041 | INFO     | current chi2=1.895171269101391 (change=70.77348257719916 %)
[2026-01-11 05:20:28] 2026-01-11 04:19:30,041 | INFO     | sum of square deviations: 12295263090.0
[2026-01-11 05:20:28] 2026-01-11 04:19:30,045 | INFO     | sum of deviations: -89473163553.0
[2026-01-11 05:20:28] 2026-01-11 04:19:30,045 | INFO     | mean x: 1768094634.0
[2026-01-11 05:20:28] 2026-01-11 04:19:30,045 | INFO     | mean y: 2527613.9208211144
[2026-01-11 05:20:28] 2026-01-11 04:19:30,046 | INFO     | intersect: 12869029063.062538
[2026-01-11 05:20:28] 2026-01-11 04:19:30,046 | INFO     | chi2: 1.0237015430809002
[2026-01-11 05:20:28] 2026-01-11 04:19:30,046 | INFO     | current chi2=1.0237015430809002 (change=45.983692356929005 %)
[2026-01-11 05:20:28] 2026-01-11 04:19:30,047 | INFO     | sum of square deviations: 11762304260.0
[2026-01-11 05:20:28] 2026-01-11 04:19:30,056 | INFO     | sum of deviations: -92383978785.5
[2026-01-11 05:20:28] 2026-01-11 04:19:30,056 | INFO     | mean x: 1768094786.5
[2026-01-11 05:20:28] 2026-01-11 04:19:30,056 | INFO     | mean y: 2528436.9553571427
[2026-01-11 05:20:28] 2026-01-11 04:19:30,056 | INFO     | intersect: 13889571964.833725
[2026-01-11 05:20:28] 2026-01-11 04:19:30,057 | INFO     | chi2: 1.0030200273110816
[2026-01-11 05:20:28] 2026-01-11 04:19:30,057 | INFO     | current chi2=1.0030200273110816 (change=2.020268105445669 %)
[2026-01-11 05:20:28] 2026-01-11 04:19:30,057 | INFO     | left removable region: 30
[2026-01-11 05:20:28] 2026-01-11 04:19:30,058 | INFO     | sum of square deviations: 9691828230.0
[2026-01-11 05:20:28] 2026-01-11 04:19:30,061 | INFO     | sum of deviations: -37959959619.999985
[2026-01-11 05:20:28] 2026-01-11 04:19:30,061 | INFO     | mean x: 1768095061.0
[2026-01-11 05:20:28] 2026-01-11 04:19:30,061 | INFO     | mean y: 2525838.7365079364
[2026-01-11 05:20:28] 2026-01-11 04:19:30,062 | INFO     | intersect: 6927619384.25856
[2026-01-11 05:20:28] 2026-01-11 04:19:30,062 | INFO     | chi2: 0.1680544643752606
[2026-01-11 05:20:28] 2026-01-11 04:19:30,062 | INFO     | current memory leak: -3.92 B/s (using 315 data points, chi2=0.17)
[2026-01-11 05:20:28] 2026-01-11 04:19:30,063 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-11 05:20:28] 2026-01-11 04:19:30,063 | INFO     | ..............................
[2026-01-11 05:20:28] 2026-01-11 04:19:30,063 | INFO     | . Timing measurements:
[2026-01-11 05:20:28] 2026-01-11 04:19:30,064 | INFO     | . get job = 0 s
[2026-01-11 05:20:28] 2026-01-11 04:19:30,064 | INFO     | . initial setup = 12 s
[2026-01-11 05:20:28] 2026-01-11 04:19:30,064 | INFO     | . payload setup = 155 s
[2026-01-11 05:20:28] 2026-01-11 04:19:30,064 | INFO     | . stage-in = 0 s
[2026-01-11 05:20:28] 2026-01-11 04:19:30,064 | INFO     | . payload execution = 21561 s
[2026-01-11 05:20:28] 2026-01-11 04:19:30,064 | INFO     | . stage-out = 4 s
[2026-01-11 05:20:28] 2026-01-11 04:19:30,064 | INFO     | . log creation = 1 s
[2026-01-11 05:20:28] 2026-01-11 04:19:30,064 | INFO     | ..............................
[2026-01-11 05:20:28] 2026-01-11 04:19:30,218 | INFO     | 
[2026-01-11 05:20:28] 2026-01-11 04:19:30,218 | INFO     | job summary report
[2026-01-11 05:20:28] 2026-01-11 04:19:30,218 | INFO     | --------------------------------------------------
[2026-01-11 05:20:28] 2026-01-11 04:19:30,218 | INFO     | PanDA job id: 6963188971
[2026-01-11 05:20:28] 2026-01-11 04:19:30,218 | INFO     | task id: 47898826
[2026-01-11 05:20:28] 2026-01-11 04:19:30,218 | INFO     | errors: (none)
[2026-01-11 05:20:28] 2026-01-11 04:19:30,219 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 05:20:28] 2026-01-11 04:19:30,219 | INFO     | pilot state: finished 
[2026-01-11 05:20:28] 2026-01-11 04:19:30,219 | INFO     | transexitcode: 0
[2026-01-11 05:20:28] 2026-01-11 04:19:30,219 | INFO     | exeerrorcode: 0
[2026-01-11 05:20:28] 2026-01-11 04:19:30,219 | INFO     | exeerrordiag: 
[2026-01-11 05:20:28] 2026-01-11 04:19:30,219 | INFO     | exitcode: 0
[2026-01-11 05:20:28] 2026-01-11 04:19:30,219 | INFO     | exitmsg: OK
[2026-01-11 05:20:28] 2026-01-11 04:19:30,219 | INFO     | cpuconsumptiontime: 81697 s
[2026-01-11 05:20:28] 2026-01-11 04:19:30,219 | INFO     | nevents: 400
[2026-01-11 05:20:28] 2026-01-11 04:19:30,219 | INFO     | neventsw: 0
[2026-01-11 05:20:28] 2026-01-11 04:19:30,219 | INFO     | pid: 5091
[2026-01-11 05:20:28] 2026-01-11 04:19:30,219 | INFO     | pgrp: 5091
[2026-01-11 05:20:28] 2026-01-11 04:19:30,219 | INFO     | corecount: 8
[2026-01-11 05:20:28] 2026-01-11 04:19:30,220 | INFO     | event service: False
[2026-01-11 05:20:28] 2026-01-11 04:19:30,220 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2283999, 23: 2284027, 33: 2284055, 44: 2284111, 55: 2284267, 66: 2284295, 76: 2284323, 87: 2284379, 98: 2284407, 109: 2285033, 
[2026-01-11 05:20:28] 2026-01-11 04:19:30,220 | INFO     | --------------------------------------------------
[2026-01-11 05:20:28] 2026-01-11 04:19:30,220 | INFO     | 
[2026-01-11 05:20:28] 2026-01-11 04:19:30,220 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2026-01-11 05:20:28] 2026-01-11 04:19:30,841 | INFO     | time since job start (22071s) is within the limit (349056.0s)
[2026-01-11 05:20:28] 2026-01-11 04:19:30,843 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,844 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,844 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,844 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,844 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,844 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,844 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,844 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,845 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,845 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,845 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,845 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,845 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,845 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,845 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,845 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,845 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,846 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 05:20:28] 2026-01-11 04:19:30,846 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,846 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 05:20:28] 2026-01-11 04:19:30,846 | INFO     | job 6963188971 has completed (purged errors)
[2026-01-11 05:20:28] 2026-01-11 04:19:30,846 | INFO     | overall cleanup function is called
[2026-01-11 05:20:28] 2026-01-11 04:19:31,855 | INFO     | --- collectZombieJob: --- 10, [5091]
[2026-01-11 05:20:28] 2026-01-11 04:19:31,855 | INFO     | zombie collector waiting for pid 5091
[2026-01-11 05:20:28] 2026-01-11 04:19:31,855 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 05:20:28] 2026-01-11 04:19:31,855 | INFO     | collected zombie processes
[2026-01-11 05:20:28] 2026-01-11 04:19:31,855 | INFO     | will attempt to kill all subprocesses of pid=5091
[2026-01-11 05:20:28] 2026-01-11 04:19:31,932 | INFO     | process IDs to be killed: [5091] (in reverse order)
[2026-01-11 05:20:28] 2026-01-11 04:19:32,818 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 05:20:28] 2026-01-11 04:19:32,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 05:20:28] 2026-01-11 04:19:32,820 | INFO     | did not find any defunct processes belonging to 5091
[2026-01-11 05:20:28] 2026-01-11 04:19:32,822 | INFO     | did not find any defunct processes belonging to 5091
[2026-01-11 05:20:28] 2026-01-11 04:19:32,823 | INFO     | ready for new job
[2026-01-11 05:20:28] 2026-01-11 04:19:32,823 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 05:20:28] 2026-01-11 04:19:32,825 | INFO     | ***************************************
[2026-01-11 05:20:28] 2026-01-11 04:19:32,825 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 05:20:28] 2026-01-11 04:19:32,825 | INFO     | ***************************************
[2026-01-11 05:20:28] 2026-01-11 04:19:32,826 | INFO     | 
[2026-01-11 05:20:28] 2026-01-11 04:19:32,826 | INFO     | pilot is running in a VM
[2026-01-11 05:20:28] 2026-01-11 04:19:32,826 | INFO     | architecture information:
[2026-01-11 05:20:28] 2026-01-11 04:19:32,841 | INFO     | executing command: cat /etc/os-release
[2026-01-11 05:20:28] 2026-01-11 04:19:33,172 | INFO     | cat /etc/os-release:
[2026-01-11 05:20:28] NAME="CentOS Linux"
[2026-01-11 05:20:28] VERSION="7 (Core)"
[2026-01-11 05:20:28] ID="centos"
[2026-01-11 05:20:28] ID_LIKE="rhel fedora"
[2026-01-11 05:20:28] VERSION_ID="7"
[2026-01-11 05:20:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 05:20:28] ANSI_COLOR="0;31"
[2026-01-11 05:20:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 05:20:28] HOME_URL="https://www.centos.org/"
[2026-01-11 05:20:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 05:20:28] 
[2026-01-11 05:20:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 05:20:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 05:20:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 05:20:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 05:20:28] 
[2026-01-11 05:20:28] 2026-01-11 04:19:33,172 | INFO     | ***************************************
[2026-01-11 05:20:28] 2026-01-11 04:19:33,676 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2026-01-11 05:20:28] 2026-01-11 04:19:33,918 | INFO     | sufficient remaining disk space (496296263680 B)
[2026-01-11 05:20:28] 2026-01-11 04:19:33,918 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 05:20:28] 2026-01-11 04:19:33,918 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 05:20:28] 2026-01-11 04:19:33,918 | INFO     | update_server=False
[2026-01-11 05:20:28] 2026-01-11 04:19:33,918 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 05:20:28] 2026-01-11 04:19:33,919 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 05:20:28] 2026-01-11 04:19:33,920 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 05:20:28] 2026-01-11 04:19:33,920 | INFO     | aborting loop
[2026-01-11 05:20:28] 2026-01-11 04:19:34,448 | INFO     | all data control threads have been joined
[2026-01-11 05:20:28] 2026-01-11 04:19:34,546 | INFO     | all payload control threads have been joined
[2026-01-11 05:20:28] 2026-01-11 04:19:34,925 | INFO     | [job] retrieve thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:19:34,927 | INFO     | [job] job monitor thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:19:35,081 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 05:20:28] 2026-01-11 04:19:35,085 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:19:35,096 | INFO     | [data] copytool_in thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:19:35,104 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:19:35,178 | INFO     | all job control threads have been joined
[2026-01-11 05:20:28] 2026-01-11 04:19:35,233 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 05:20:28] 2026-01-11 04:19:35,367 | INFO     | [job] validate thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:19:35,440 | INFO     | [payload] failed_post thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:19:35,454 | INFO     | [data] control thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:19:35,552 | INFO     | [payload] control thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:19:35,622 | INFO     | [payload] validate_post thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:19:36,025 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:19:36,184 | INFO     | [job] control thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:19:36,239 | INFO     | [job] queue monitor thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:19:36,363 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:19:37,088 | INFO     | [data] copytool_out thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:19:37,928 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 05:20:28] 2026-01-11 04:20:03,988 | INFO     | PID=31005 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 05:20:28] 2026-01-11 04:20:03,989 | INFO     | .. there are 2 such processes running
[2026-01-11 05:20:28] 2026-01-11 04:20:03,990 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 05:20:28] 2026-01-11 04:20:03,990 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 05:20:28] 2026-01-11 04:20:03,990 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 05:20:28] 2026-01-11 04:20:17,266 | INFO     | [monitor] cgroup control has ended
[2026-01-11 05:20:28] 2026-01-11 04:20:18,089 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140039819323200)>', '<ExcThread(monitor, started 140039086405376)>']
[2026-01-11 05:20:28] 2026-01-11 04:20:19,080 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 05:20:28] 2026-01-11 04:20:19,080 | INFO     | [monitor] control thread has ended
[2026-01-11 05:20:28] 2026-01-11 04:20:23,115 | INFO     | all workflow threads have been joined
[2026-01-11 05:20:28] 2026-01-11 04:20:23,115 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 05:20:28] 2026-01-11 04:20:23,115 | INFO     | traces error code: 0
[2026-01-11 05:20:28] 2026-01-11 04:20:23,116 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 05:20:28] 2026-01-11 04:20:23,495 [wrapper] ==== pilot stdout END ====
[2026-01-11 05:20:28] 2026-01-11 04:20:23,624 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 05:20:28] 2026-01-11 04:20:23,710 [wrapper] pilotpid: 31005
[2026-01-11 05:20:28] 2026-01-11 04:20:23,817 [wrapper] Pilot exit status: 0
[2026-01-11 05:20:28] 2026-01-11 04:20:24,390 [wrapper] pandaids: 6963188971
[2026-01-11 05:20:28] 2026-01-11 04:20:25,477 [wrapper] cleanup supervisor_pilot  4397 31006
[2026-01-11 05:20:28] 2026-01-11 04:20:25,603 [wrapper] Test setup, not cleaning
[2026-01-11 05:20:28] 2026-01-11 04:20:25,693 [wrapper] apfmon messages muted
[2026-01-11 05:20:28] 2026-01-11 04:20:25,815 [wrapper] ==== wrapper stdout END ====
[2026-01-11 05:20:28] 2026-01-11 04:20:25,950 [wrapper] ==== wrapper stderr END ====
[2026-01-11 05:20:28]  *** Error codes and diagnostics ***
[2026-01-11 05:20:28]     "exeErrorCode": 0,
[2026-01-11 05:20:28]     "exeErrorDiag": "",
[2026-01-11 05:20:28]     "pilotErrorCode": 0,
[2026-01-11 05:20:28]     "pilotErrorDiag": "",
[2026-01-11 05:20:28]  *** Listing of results directory ***
[2026-01-11 05:20:28] total 450188
[2026-01-11 05:20:28] -rw-r--r--. 1 boinc boinc    597923 Jan  7 14:01 pilot3.tar.gz
[2026-01-11 05:20:28] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:21 queuedata.json
[2026-01-11 05:20:28] -rwx------. 1 boinc boinc     36322 Jan  9 05:22 runpilot2-wrapper.sh
[2026-01-11 05:20:28] -rw-r--r--. 1 boinc boinc       100 Jan 10 23:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 05:20:28] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 23:06 run_atlas
[2026-01-11 05:20:28] -rw-r--r--. 1 boinc boinc       105 Jan 10 23:06 job.xml
[2026-01-11 05:20:28] -rw-r--r--. 1 boinc boinc      6391 Jan 10 23:06 init_data.xml
[2026-01-11 05:20:28] -rw-r--r--. 2 boinc boinc 225459207 Jan 10 23:06 EVNT.47898824._001455.pool.root.1
[2026-01-11 05:20:28] -rw-r--r--. 2 boinc boinc     15847 Jan 10 23:06 start_atlas.sh
[2026-01-11 05:20:28] drwxrwx--x. 2 boinc boinc        68 Jan 10 23:06 shared
[2026-01-11 05:20:28] -rw-r--r--. 2 boinc boinc    610536 Jan 10 23:06 input.tar.gz
[2026-01-11 05:20:28] -rw-r--r--. 1 boinc boinc         0 Jan 10 23:06 boinc_lockfile
[2026-01-11 05:20:28] -rw-r--r--. 1 boinc boinc      2520 Jan 10 23:07 pandaJob.out
[2026-01-11 05:20:28] -rw-------. 1 boinc boinc    989548 Jan 10 23:11 agis_schedconf.cvmfs.json
[2026-01-11 05:20:28] drwx------. 7 boinc boinc      4096 Jan 10 23:11 pilot3
[2026-01-11 05:20:28] -rw-------. 1 boinc boinc 224638241 Jan 11 05:15 HITS.47898826._037908.pool.root.1
[2026-01-11 05:20:28] -rw-r--r--. 1 boinc boinc       531 Jan 11 05:16 boinc_task_state.xml
[2026-01-11 05:20:28] -rw-------. 1 boinc boinc      1012 Jan 11 05:17 memory_monitor_summary.json
[2026-01-11 05:20:28] -rw-------. 1 boinc boinc   1516240 Jan 11 05:17 agis_ddmendpoints.agis.ALL.json
[2026-01-11 05:20:28] -rw-------. 1 boinc boinc    554034 Jan 11 05:17 log.47898826._037908.job.log.tgz.1
[2026-01-11 05:20:28] -rw-------. 1 boinc boinc      7780 Jan 11 05:19 heartbeat.json
[2026-01-11 05:20:28] -rw-------. 1 boinc boinc        95 Jan 11 05:20 pilot_heartbeat.json
[2026-01-11 05:20:28] -rw-------. 1 boinc boinc      4884 Jan 11 05:20 pilotlog.txt
[2026-01-11 05:20:28] -rw-------. 1 boinc boinc   2923982 Jan 11 05:20 log.47898826._037908.job.log.1
[2026-01-11 05:20:28] -rw-------. 1 boinc boinc       357 Jan 11 05:20 output.list
[2026-01-11 05:20:28] -rw-r--r--. 1 boinc boinc        28 Jan 11 05:20 wrapper_checkpoint.txt
[2026-01-11 05:20:28] -rw-r--r--. 1 boinc boinc       620 Jan 11 05:20 runtime_log
[2026-01-11 05:20:28] -rw-------. 1 boinc boinc   3502080 Jan 11 05:20 result.tar.gz
[2026-01-11 05:20:28] -rw-r--r--. 1 boinc boinc      8817 Jan 11 05:20 runtime_log.err
[2026-01-11 05:20:28] -rw-------. 1 boinc boinc       657 Jan 11 05:20 Jb1LDm1BJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAtgKDmprN4Gm.diag
[2026-01-11 05:20:28] -rw-r--r--. 1 boinc boinc      8192 Jan 11 05:20 boinc_mmap_file
[2026-01-11 05:20:28] -rw-r--r--. 1 boinc boinc     20766 Jan 11 05:20 stderr.txt
[2026-01-11 05:20:28] HITS file was successfully produced:
[2026-01-11 05:20:28] -rw-------. 1 boinc boinc 224638241 Jan 11 05:15 shared/HITS.pool.root.1
[2026-01-11 05:20:28]  *** Contents of shared directory: ***
[2026-01-11 05:20:28] total 443588
[2026-01-11 05:20:28] -rw-r--r--. 2 boinc boinc 225459207 Jan 10 23:06 ATLAS.root_0
[2026-01-11 05:20:28] -rw-r--r--. 2 boinc boinc     15847 Jan 10 23:06 start_atlas.sh
[2026-01-11 05:20:28] -rw-r--r--. 2 boinc boinc    610536 Jan 10 23:06 input.tar.gz
[2026-01-11 05:20:28] -rw-------. 1 boinc boinc 224638241 Jan 11 05:15 HITS.pool.root.1
[2026-01-11 05:20:28] -rw-------. 1 boinc boinc   3502080 Jan 11 05:20 result.tar.gz
05:20:29 (27186): run_atlas exited; CPU time 81899.649805
05:20:29 (27186): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN