Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:33:03 (29782): wrapper (7.7.26015): starting
12:33:03 (29782): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 12:33:03] Arguments: --nthreads 8
[2026-01-10 12:33:03] Threads: 8
[2026-01-10 12:33:03] Checking for CVMFS
[2026-01-10 12:33:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 12:33:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 12:33:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 12:33:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 12:33:07] 2.11.2.0 2730 36799 121004 154978 1 60 17645487 25165824 96 130560 0 15857153 99.775 11051928 3027 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 12:33:07] CVMFS is ok
[2026-01-10 12:33:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 12:33:07] Checking for apptainer binary...
[2026-01-10 12:33:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 12:33:07] Running /usr/bin/apptainer --version
[2026-01-10 12:33:07] apptainer version 1.3.2-1.el7
[2026-01-10 12:33:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 12:33:34] cg-vwn392.simple-grid.lan
[2026-01-10 12:33:34] apptainer works
[2026-01-10 12:33:34] Set ATHENA_PROC_NUMBER=8
[2026-01-10 12:33:34] Set ATHENA_CORE_NUMBER=8
[2026-01-10 12:33:34] Starting ATLAS job with PandaID=6963155303
[2026-01-10 12:33:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 18:44:42]  *** The last 200 lines of the pilot log: ***
[2026-01-10 18:44:43] 2026-01-10 17:43:56,560 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6963155303/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 18:44:43] 2026-01-10 17:43:56,561 | INFO     | extracted standard info from prmon json
[2026-01-10 18:44:43] 2026-01-10 17:43:56,561 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 18:44:43] 2026-01-10 17:43:56,561 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 18:44:43] 2026-01-10 17:43:56,561 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 18:44:43] 2026-01-10 17:43:56,562 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 18:44:43] 2026-01-10 17:43:56,574 | INFO     | fitting pss+swap vs Time
[2026-01-10 18:44:43] 2026-01-10 17:43:56,575 | INFO     | sum of square deviations: 13181084350.0
[2026-01-10 18:44:43] 2026-01-10 17:43:56,579 | INFO     | sum of deviations: 207627504563.0
[2026-01-10 18:44:43] 2026-01-10 17:43:56,579 | INFO     | mean x: 1768056244.0
[2026-01-10 18:44:43] 2026-01-10 17:43:56,579 | INFO     | mean y: 2434176.7449856736
[2026-01-10 18:44:43] 2026-01-10 17:43:56,580 | INFO     | intersect: -27847862211.711903
[2026-01-10 18:44:43] 2026-01-10 17:43:56,580 | INFO     | chi2: 8.115289333866203
[2026-01-10 18:44:43] 2026-01-10 17:43:56,581 | INFO     | sum of square deviations: 12622636670.0
[2026-01-10 18:44:43] 2026-01-10 17:43:56,593 | INFO     | sum of deviations: 227257322405.49997
[2026-01-10 18:44:43] 2026-01-10 17:43:56,593 | INFO     | mean x: 1768056091.5
[2026-01-10 18:44:43] 2026-01-10 17:43:56,593 | INFO     | mean y: 2439463.398255814
[2026-01-10 18:44:43] 2026-01-10 17:43:56,594 | INFO     | intersect: -31829554415.660583
[2026-01-10 18:44:43] 2026-01-10 17:43:56,594 | INFO     | chi2: 7.385564263601567
[2026-01-10 18:44:43] 2026-01-10 17:43:56,594 | INFO     | current chi2=7.385564263601567 (change=8.991978477210843 %)
[2026-01-10 18:44:43] 2026-01-10 17:43:56,595 | INFO     | right removable region: 343
[2026-01-10 18:44:43] 2026-01-10 17:43:56,595 | INFO     | sum of square deviations: 12622636670.0
[2026-01-10 18:44:43] 2026-01-10 17:43:56,599 | INFO     | sum of deviations: 85710418508.0
[2026-01-10 18:44:43] 2026-01-10 17:43:56,599 | INFO     | mean x: 1768056396.5
[2026-01-10 18:44:43] 2026-01-10 17:43:56,599 | INFO     | mean y: 2467454.7790697673
[2026-01-10 18:44:43] 2026-01-10 17:43:56,600 | INFO     | intersect: -12003015840.951519
[2026-01-10 18:44:43] 2026-01-10 17:43:56,600 | INFO     | chi2: 3.2639779240171345
[2026-01-10 18:44:43] 2026-01-10 17:43:56,600 | INFO     | current chi2=3.2639779240171345 (change=59.779894594809925 %)
[2026-01-10 18:44:43] 2026-01-10 17:43:56,601 | INFO     | sum of square deviations: 12080189290.0
[2026-01-10 18:44:43] 2026-01-10 17:43:56,605 | INFO     | sum of deviations: -1104132879.0000038
[2026-01-10 18:44:43] 2026-01-10 17:43:56,605 | INFO     | mean x: 1768056549.0
[2026-01-10 18:44:43] 2026-01-10 17:43:56,605 | INFO     | mean y: 2491831.389380531
[2026-01-10 18:44:43] 2026-01-10 17:43:56,605 | INFO     | intersect: 164092723.62856013
[2026-01-10 18:44:43] 2026-01-10 17:43:56,606 | INFO     | chi2: 0.8905754905452575
[2026-01-10 18:44:43] 2026-01-10 17:43:56,606 | INFO     | current chi2=0.8905754905452575 (change=72.71502714549052 %)
[2026-01-10 18:44:43] 2026-01-10 17:43:56,607 | INFO     | sum of square deviations: 11553509647.5
[2026-01-10 18:44:43] 2026-01-10 17:43:56,617 | INFO     | sum of deviations: -11775713981.5
[2026-01-10 18:44:43] 2026-01-10 17:43:56,618 | INFO     | mean x: 1768056701.5
[2026-01-10 18:44:43] 2026-01-10 17:43:56,618 | INFO     | mean y: 2494902.026946108
[2026-01-10 18:44:43] 2026-01-10 17:43:56,618 | INFO     | intersect: 1804555977.420039
[2026-01-10 18:44:43] 2026-01-10 17:43:56,618 | INFO     | chi2: 0.8327941779174257
[2026-01-10 18:44:43] 2026-01-10 17:43:56,618 | INFO     | current chi2=0.8327941779174257 (change=6.488087000064984 %)
[2026-01-10 18:44:43] 2026-01-10 17:43:56,619 | INFO     | left removable region: 30
[2026-01-10 18:44:43] 2026-01-10 17:43:56,619 | INFO     | sum of square deviations: 9508390372.0
[2026-01-10 18:44:43] 2026-01-10 17:43:56,622 | INFO     | sum of deviations: 14016054668.0
[2026-01-10 18:44:43] 2026-01-10 17:43:56,623 | INFO     | mean x: 1768056976.0
[2026-01-10 18:44:43] 2026-01-10 17:43:56,623 | INFO     | mean y: 2500139.9041533545
[2026-01-10 18:44:43] 2026-01-10 17:43:56,623 | INFO     | intersect: -2603743636.6165905
[2026-01-10 18:44:43] 2026-01-10 17:43:56,623 | INFO     | chi2: 0.0014651106007251993
[2026-01-10 18:44:43] 2026-01-10 17:43:56,624 | INFO     | current memory leak: 1.47 B/s (using 313 data points, chi2=0.00)
[2026-01-10 18:44:43] 2026-01-10 17:43:56,624 | INFO     | could have reported an average CPU frequency of 1999 MHz (15 samples)
[2026-01-10 18:44:43] 2026-01-10 17:43:56,625 | INFO     | ..............................
[2026-01-10 18:44:43] 2026-01-10 17:43:56,625 | INFO     | . Timing measurements:
[2026-01-10 18:44:43] 2026-01-10 17:43:56,625 | INFO     | . get job = 0 s
[2026-01-10 18:44:43] 2026-01-10 17:43:56,625 | INFO     | . initial setup = 15 s
[2026-01-10 18:44:43] 2026-01-10 17:43:56,625 | INFO     | . payload setup = 151 s
[2026-01-10 18:44:43] 2026-01-10 17:43:56,625 | INFO     | . stage-in = 0 s
[2026-01-10 18:44:43] 2026-01-10 17:43:56,625 | INFO     | . payload execution = 21460 s
[2026-01-10 18:44:43] 2026-01-10 17:43:56,625 | INFO     | . stage-out = 4 s
[2026-01-10 18:44:43] 2026-01-10 17:43:56,626 | INFO     | . log creation = 1 s
[2026-01-10 18:44:43] 2026-01-10 17:43:56,626 | INFO     | ..............................
[2026-01-10 18:44:43] 2026-01-10 17:43:56,723 | INFO     | time since job start (21964s) is within the limit (349056.0s)
[2026-01-10 18:44:43] 2026-01-10 17:43:56,755 | INFO     | 
[2026-01-10 18:44:43] 2026-01-10 17:43:56,755 | INFO     | job summary report
[2026-01-10 18:44:43] 2026-01-10 17:43:56,755 | INFO     | --------------------------------------------------
[2026-01-10 18:44:43] 2026-01-10 17:43:56,755 | INFO     | PanDA job id: 6963155303
[2026-01-10 18:44:43] 2026-01-10 17:43:56,755 | INFO     | task id: 47898826
[2026-01-10 18:44:43] 2026-01-10 17:43:56,756 | INFO     | errors: (none)
[2026-01-10 18:44:43] 2026-01-10 17:43:56,756 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 18:44:43] 2026-01-10 17:43:56,756 | INFO     | pilot state: finished 
[2026-01-10 18:44:43] 2026-01-10 17:43:56,756 | INFO     | transexitcode: 0
[2026-01-10 18:44:43] 2026-01-10 17:43:56,756 | INFO     | exeerrorcode: 0
[2026-01-10 18:44:43] 2026-01-10 17:43:56,756 | INFO     | exeerrordiag: 
[2026-01-10 18:44:43] 2026-01-10 17:43:56,756 | INFO     | exitcode: 0
[2026-01-10 18:44:43] 2026-01-10 17:43:56,756 | INFO     | exitmsg: OK
[2026-01-10 18:44:43] 2026-01-10 17:43:56,756 | INFO     | cpuconsumptiontime: 80826 s
[2026-01-10 18:44:43] 2026-01-10 17:43:56,757 | INFO     | nevents: 400
[2026-01-10 18:44:43] 2026-01-10 17:43:56,757 | INFO     | neventsw: 0
[2026-01-10 18:44:43] 2026-01-10 17:43:56,757 | INFO     | pid: 7665
[2026-01-10 18:44:43] 2026-01-10 17:43:56,757 | INFO     | pgrp: 7665
[2026-01-10 18:44:43] 2026-01-10 17:43:56,757 | INFO     | corecount: 8
[2026-01-10 18:44:43] 2026-01-10 17:43:56,757 | INFO     | event service: False
[2026-01-10 18:44:43] 2026-01-10 17:43:56,757 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 13: 2284027, 24: 2284083, 34: 2284111, 45: 2284267, 56: 2284295, 67: 2284323, 77: 2284351, 88: 2284407, 99: 2284715, 10
[2026-01-10 18:44:43] 2026-01-10 17:43:56,757 | INFO     | --------------------------------------------------
[2026-01-10 18:44:43] 2026-01-10 17:43:56,757 | INFO     | 
[2026-01-10 18:44:43] 2026-01-10 17:43:56,758 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-10 18:44:43] 2026-01-10 17:43:57,254 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,254 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,254 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,255 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,255 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,255 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,256 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,256 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,256 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,256 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,256 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,256 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,256 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,256 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 18:44:43] 2026-01-10 17:43:57,256 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,257 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 18:44:43] 2026-01-10 17:43:57,257 | INFO     | job 6963155303 has completed (purged errors)
[2026-01-10 18:44:43] 2026-01-10 17:43:57,257 | INFO     | overall cleanup function is called
[2026-01-10 18:44:43] 2026-01-10 17:43:58,269 | INFO     | --- collectZombieJob: --- 10, [7665]
[2026-01-10 18:44:43] 2026-01-10 17:43:58,270 | INFO     | zombie collector waiting for pid 7665
[2026-01-10 18:44:43] 2026-01-10 17:43:58,270 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 18:44:43] 2026-01-10 17:43:58,270 | INFO     | collected zombie processes
[2026-01-10 18:44:43] 2026-01-10 17:43:58,270 | INFO     | will attempt to kill all subprocesses of pid=7665
[2026-01-10 18:44:43] 2026-01-10 17:43:58,371 | INFO     | process IDs to be killed: [7665] (in reverse order)
[2026-01-10 18:44:43] 2026-01-10 17:43:59,252 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 18:44:43] 2026-01-10 17:43:59,252 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 18:44:43] 2026-01-10 17:43:59,255 | INFO     | did not find any defunct processes belonging to 7665
[2026-01-10 18:44:43] 2026-01-10 17:43:59,256 | INFO     | did not find any defunct processes belonging to 7665
[2026-01-10 18:44:43] 2026-01-10 17:43:59,257 | INFO     | ready for new job
[2026-01-10 18:44:43] 2026-01-10 17:43:59,257 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 18:44:43] 2026-01-10 17:43:59,259 | INFO     | ***************************************
[2026-01-10 18:44:43] 2026-01-10 17:43:59,259 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 18:44:43] 2026-01-10 17:43:59,260 | INFO     | ***************************************
[2026-01-10 18:44:43] 2026-01-10 17:43:59,260 | INFO     | 
[2026-01-10 18:44:43] 2026-01-10 17:43:59,260 | INFO     | pilot is running in a VM
[2026-01-10 18:44:43] 2026-01-10 17:43:59,261 | INFO     | architecture information:
[2026-01-10 18:44:43] 2026-01-10 17:43:59,289 | INFO     | executing command: cat /etc/os-release
[2026-01-10 18:44:43] 2026-01-10 17:43:59,655 | INFO     | cat /etc/os-release:
[2026-01-10 18:44:43] NAME="CentOS Linux"
[2026-01-10 18:44:43] VERSION="7 (Core)"
[2026-01-10 18:44:43] ID="centos"
[2026-01-10 18:44:43] ID_LIKE="rhel fedora"
[2026-01-10 18:44:43] VERSION_ID="7"
[2026-01-10 18:44:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 18:44:43] ANSI_COLOR="0;31"
[2026-01-10 18:44:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 18:44:43] HOME_URL="https://www.centos.org/"
[2026-01-10 18:44:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 18:44:43] 
[2026-01-10 18:44:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 18:44:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 18:44:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 18:44:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 18:44:43] 
[2026-01-10 18:44:43] 2026-01-10 17:43:59,655 | INFO     | ***************************************
[2026-01-10 18:44:43] 2026-01-10 17:44:00,159 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-10 18:44:43] 2026-01-10 17:44:00,423 | INFO     | sufficient remaining disk space (497663606784 B)
[2026-01-10 18:44:43] 2026-01-10 17:44:00,424 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 18:44:43] 2026-01-10 17:44:00,424 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 18:44:43] 2026-01-10 17:44:00,424 | INFO     | update_server=False
[2026-01-10 18:44:43] 2026-01-10 17:44:00,424 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 18:44:43] 2026-01-10 17:44:00,425 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 18:44:43] 2026-01-10 17:44:00,485 | INFO     | all data control threads have been joined
[2026-01-10 18:44:43] 2026-01-10 17:44:00,599 | INFO     | all payload control threads have been joined
[2026-01-10 18:44:43] 2026-01-10 17:44:00,652 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 18:44:43] 2026-01-10 17:44:00,653 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 18:44:43] 2026-01-10 17:44:00,653 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 18:44:43] 2026-01-10 17:44:00,653 | INFO     | will abort loop
[2026-01-10 18:44:43] 2026-01-10 17:44:01,430 | INFO     | [job] retrieve thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:01,444 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:01,491 | INFO     | [data] control thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:01,512 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:01,530 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:01,605 | INFO     | [payload] control thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:01,625 | INFO     | all job control threads have been joined
[2026-01-10 18:44:43] 2026-01-10 17:44:01,658 | INFO     | [job] job monitor thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:01,770 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 18:44:43] 2026-01-10 17:44:02,062 | INFO     | [payload] failed_post thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:02,282 | INFO     | [job] validate thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:02,432 | INFO     | [data] copytool_out thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:02,508 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:02,631 | INFO     | [job] control thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:02,775 | INFO     | [payload] validate_post thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:02,776 | INFO     | [job] queue monitor thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:02,900 | INFO     | [data] copytool_in thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:03,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 18:44:43] 2026-01-10 17:44:07,458 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 18:44:43] 2026-01-10 17:44:29,870 | INFO     | PID=1107 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 18:44:43] 2026-01-10 17:44:29,870 | INFO     | .. there are 2 such processes running
[2026-01-10 18:44:43] 2026-01-10 17:44:29,871 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 18:44:43] 2026-01-10 17:44:29,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 18:44:43] 2026-01-10 17:44:29,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 18:44:43] 2026-01-10 17:44:30,312 | INFO     | [monitor] cgroup control has ended
[2026-01-10 18:44:43] 2026-01-10 17:44:32,390 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140485665867584)>', '<ExcThread(monitor, started 140485075130112)>']
[2026-01-10 18:44:43] 2026-01-10 17:44:32,889 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 18:44:43] 2026-01-10 17:44:32,890 | INFO     | [monitor] control thread has ended
[2026-01-10 18:44:43] 2026-01-10 17:44:37,416 | INFO     | all workflow threads have been joined
[2026-01-10 18:44:43] 2026-01-10 17:44:37,416 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 18:44:43] 2026-01-10 17:44:37,417 | INFO     | traces error code: 0
[2026-01-10 18:44:43] 2026-01-10 17:44:37,417 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 18:44:43] 2026-01-10 17:44:37,856 [wrapper] ==== pilot stdout END ====
[2026-01-10 18:44:43] 2026-01-10 17:44:37,945 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 18:44:43] 2026-01-10 17:44:38,033 [wrapper] pilotpid: 1107
[2026-01-10 18:44:43] 2026-01-10 17:44:38,118 [wrapper] Pilot exit status: 0
[2026-01-10 18:44:43] 2026-01-10 17:44:38,670 [wrapper] pandaids: 6963155303
[2026-01-10 18:44:43] 2026-01-10 17:44:39,538 [wrapper] cleanup supervisor_pilot  6954 1108
[2026-01-10 18:44:43] 2026-01-10 17:44:39,665 [wrapper] Test setup, not cleaning
[2026-01-10 18:44:43] 2026-01-10 17:44:39,773 [wrapper] apfmon messages muted
[2026-01-10 18:44:43] 2026-01-10 17:44:39,870 [wrapper] ==== wrapper stdout END ====
[2026-01-10 18:44:43] 2026-01-10 17:44:39,949 [wrapper] ==== wrapper stderr END ====
[2026-01-10 18:44:43]  *** Error codes and diagnostics ***
[2026-01-10 18:44:43]     "exeErrorCode": 0,
[2026-01-10 18:44:43]     "exeErrorDiag": "",
[2026-01-10 18:44:43]     "pilotErrorCode": 0,
[2026-01-10 18:44:43]     "pilotErrorDiag": "",
[2026-01-10 18:44:43]  *** Listing of results directory ***
[2026-01-10 18:44:43] total 442156
[2026-01-10 18:44:43] -rw-r--r--. 1 boinc boinc    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-10 18:44:43] -rwx------. 1 boinc boinc     36322 Jan  8 20:09 runpilot2-wrapper.sh
[2026-01-10 18:44:43] -rw-r--r--. 1 boinc boinc      5112 Jan  8 20:11 queuedata.json
[2026-01-10 18:44:43] -rw-r--r--. 1 boinc boinc       100 Jan 10 12:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 18:44:43] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 12:33 run_atlas
[2026-01-10 18:44:43] -rw-r--r--. 1 boinc boinc       105 Jan 10 12:33 job.xml
[2026-01-10 18:44:43] -rw-r--r--. 1 boinc boinc      6391 Jan 10 12:33 init_data.xml
[2026-01-10 18:44:43] -rw-r--r--. 2 boinc boinc 223608031 Jan 10 12:33 EVNT.47898824._001183.pool.root.1
[2026-01-10 18:44:43] -rw-r--r--. 2 boinc boinc     15847 Jan 10 12:33 start_atlas.sh
[2026-01-10 18:44:43] drwxrwx--x. 2 boinc boinc        68 Jan 10 12:33 shared
[2026-01-10 18:44:43] -rw-r--r--. 2 boinc boinc    592399 Jan 10 12:33 input.tar.gz
[2026-01-10 18:44:43] -rw-r--r--. 1 boinc boinc         0 Jan 10 12:33 boinc_lockfile
[2026-01-10 18:44:43] -rw-r--r--. 1 boinc boinc      2520 Jan 10 12:33 pandaJob.out
[2026-01-10 18:44:43] -rw-------. 1 boinc boinc    989564 Jan 10 12:37 agis_schedconf.cvmfs.json
[2026-01-10 18:44:43] drwx------. 5 boinc boinc      4096 Jan 10 12:37 pilot3
[2026-01-10 18:44:43] -rw-------. 1 boinc boinc 218308983 Jan 10 18:40 HITS.47898826._030553.pool.root.1
[2026-01-10 18:44:43] -rw-r--r--. 1 boinc boinc       531 Jan 10 18:40 boinc_task_state.xml
[2026-01-10 18:44:43] -rw-------. 1 boinc boinc      1012 Jan 10 18:41 memory_monitor_summary.json
[2026-01-10 18:44:43] -rw-------. 1 boinc boinc   1516240 Jan 10 18:42 agis_ddmendpoints.agis.ALL.json
[2026-01-10 18:44:43] -rw-------. 1 boinc boinc    549521 Jan 10 18:42 log.47898826._030553.job.log.tgz.1
[2026-01-10 18:44:43] -rw-------. 1 boinc boinc      7776 Jan 10 18:43 heartbeat.json
[2026-01-10 18:44:43] -rw-------. 1 boinc boinc        95 Jan 10 18:44 pilot_heartbeat.json
[2026-01-10 18:44:43] -rw-r--r--. 1 boinc boinc      8192 Jan 10 18:44 boinc_mmap_file
[2026-01-10 18:44:43] -rw-r--r--. 1 boinc boinc        28 Jan 10 18:44 wrapper_checkpoint.txt
[2026-01-10 18:44:43] -rw-------. 1 boinc boinc      5069 Jan 10 18:44 pilotlog.txt
[2026-01-10 18:44:43] -rw-------. 1 boinc boinc   2926381 Jan 10 18:44 log.47898826._030553.job.log.1
[2026-01-10 18:44:43] -rw-------. 1 boinc boinc       357 Jan 10 18:44 output.list
[2026-01-10 18:44:43] -rw-r--r--. 1 boinc boinc       620 Jan 10 18:44 runtime_log
[2026-01-10 18:44:43] -rw-------. 1 boinc boinc   3491840 Jan 10 18:44 result.tar.gz
[2026-01-10 18:44:43] -rw-r--r--. 1 boinc boinc      8817 Jan 10 18:44 runtime_log.err
[2026-01-10 18:44:43] -rw-------. 1 boinc boinc       657 Jan 10 18:44 GveNDmMZAy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmaIlKDmRur6Sm.diag
[2026-01-10 18:44:43] -rw-r--r--. 1 boinc boinc     20530 Jan 10 18:44 stderr.txt
[2026-01-10 18:44:43] HITS file was successfully produced:
[2026-01-10 18:44:43] -rw-------. 1 boinc boinc 218308983 Jan 10 18:40 shared/HITS.pool.root.1
[2026-01-10 18:44:43]  *** Contents of shared directory: ***
[2026-01-10 18:44:43] total 435572
[2026-01-10 18:44:43] -rw-r--r--. 2 boinc boinc 223608031 Jan 10 12:33 ATLAS.root_0
[2026-01-10 18:44:43] -rw-r--r--. 2 boinc boinc     15847 Jan 10 12:33 start_atlas.sh
[2026-01-10 18:44:43] -rw-r--r--. 2 boinc boinc    592399 Jan 10 12:33 input.tar.gz
[2026-01-10 18:44:43] -rw-------. 1 boinc boinc 218308983 Jan 10 18:40 HITS.pool.root.1
[2026-01-10 18:44:43] -rw-------. 1 boinc boinc   3491840 Jan 10 18:44 result.tar.gz
18:44:45 (29782): run_atlas exited; CPU time 81038.212565
18:44:45 (29782): called boinc_finish(0)

</stderr_txt>
]]>

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