Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:23:22 (13753): wrapper (7.7.26015): starting
09:23:22 (13753): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 09:23:22] Arguments: --nthreads 8
[2026-01-10 09:23:22] Threads: 8
[2026-01-10 09:23:22] Checking for CVMFS
[2026-01-10 09:23:23] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 09:23:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 09:23:24] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 09:23:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 09:23:25] 2.11.2.0 23922 36593 129840 154973 1 60 19080255 25165825 899 130560 0 13327453 99.697 14102594 2356 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 09:23:25] CVMFS is ok
[2026-01-10 09:23:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 09:23:25] Checking for apptainer binary...
[2026-01-10 09:23:25] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 09:23:25] Running /usr/bin/apptainer --version
[2026-01-10 09:23:25] apptainer version 1.3.2-1.el7
[2026-01-10 09:23:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 09:23:32] cg-vwn468.simple-grid.lan
[2026-01-10 09:23:32] apptainer works
[2026-01-10 09:23:32] Set ATHENA_PROC_NUMBER=8
[2026-01-10 09:23:32] Set ATHENA_CORE_NUMBER=8
[2026-01-10 09:23:32] Starting ATLAS job with PandaID=6963188640
[2026-01-10 09:23:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 15:10:36]  *** The last 200 lines of the pilot log: ***
[2026-01-10 15:10:36] 2026-01-10 14:09:48,135 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 15:10:36] 2026-01-10 14:09:48,136 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2250.0
[2026-01-10 15:10:36] 2026-01-10 14:09:48,138 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6963188640/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 15:10:36] 2026-01-10 14:09:48,139 | INFO     | extracted standard info from prmon json
[2026-01-10 15:10:36] 2026-01-10 14:09:48,139 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 15:10:36] 2026-01-10 14:09:48,139 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 15:10:36] 2026-01-10 14:09:48,139 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 15:10:36] 2026-01-10 14:09:48,139 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 15:10:36] 2026-01-10 14:09:48,146 | INFO     | fitting pss+swap vs Time
[2026-01-10 15:10:36] 2026-01-10 14:09:48,147 | INFO     | sum of square deviations: 10743038637.5
[2026-01-10 15:10:36] 2026-01-10 14:09:48,151 | INFO     | sum of deviations: 128237608741.00003
[2026-01-10 15:10:36] 2026-01-10 14:09:48,151 | INFO     | mean x: 1768044125.5
[2026-01-10 15:10:36] 2026-01-10 14:09:48,151 | INFO     | mean y: 2457413.773006135
[2026-01-10 15:10:36] 2026-01-10 14:09:48,151 | INFO     | intersect: -21102349005.82436
[2026-01-10 15:10:36] 2026-01-10 14:09:48,152 | INFO     | chi2: 7.624288604669089
[2026-01-10 15:10:36] 2026-01-10 14:09:48,152 | INFO     | sum of square deviations: 10256266720.0
[2026-01-10 15:10:36] 2026-01-10 14:09:48,156 | INFO     | sum of deviations: 147554043506.00003
[2026-01-10 15:10:36] 2026-01-10 14:09:48,156 | INFO     | mean x: 1768043973.0
[2026-01-10 15:10:36] 2026-01-10 14:09:48,156 | INFO     | mean y: 2463381.61682243
[2026-01-10 15:10:36] 2026-01-10 14:09:48,157 | INFO     | intersect: -25433891233.053646
[2026-01-10 15:10:36] 2026-01-10 14:09:48,157 | INFO     | chi2: 6.9067118403628065
[2026-01-10 15:10:36] 2026-01-10 14:09:48,157 | INFO     | current chi2=6.9067118403628065 (change=9.411720902942221 %)
[2026-01-10 15:10:36] 2026-01-10 14:09:48,157 | INFO     | right removable region: 320
[2026-01-10 15:10:36] 2026-01-10 14:09:48,158 | INFO     | sum of square deviations: 10256266720.0
[2026-01-10 15:10:36] 2026-01-10 14:09:48,161 | INFO     | sum of deviations: 17823811857.0
[2026-01-10 15:10:36] 2026-01-10 14:09:48,161 | INFO     | mean x: 1768044278.0
[2026-01-10 15:10:36] 2026-01-10 14:09:48,162 | INFO     | mean y: 2491983.0560747664
[2026-01-10 15:10:36] 2026-01-10 14:09:48,162 | INFO     | intersect: -3070096652.3843074
[2026-01-10 15:10:36] 2026-01-10 14:09:48,162 | INFO     | chi2: 3.1003478181391135
[2026-01-10 15:10:36] 2026-01-10 14:09:48,162 | INFO     | current chi2=3.1003478181391135 (change=59.335906877390876 %)
[2026-01-10 15:10:36] 2026-01-10 14:09:48,163 | INFO     | sum of square deviations: 9784425315.0
[2026-01-10 15:10:36] 2026-01-10 14:09:48,166 | INFO     | sum of deviations: -55108922743.0
[2026-01-10 15:10:36] 2026-01-10 14:09:48,167 | INFO     | mean x: 1768044430.5
[2026-01-10 15:10:36] 2026-01-10 14:09:48,167 | INFO     | mean y: 2515492.740506329
[2026-01-10 15:10:36] 2026-01-10 14:09:48,167 | INFO     | intersect: 9960690938.90016
[2026-01-10 15:10:36] 2026-01-10 14:09:48,167 | INFO     | chi2: 1.0229190302061473
[2026-01-10 15:10:36] 2026-01-10 14:09:48,167 | INFO     | current chi2=1.0229190302061473 (change=67.00631380061989 %)
[2026-01-10 15:10:36] 2026-01-10 14:09:48,168 | INFO     | sum of square deviations: 9327281860.0
[2026-01-10 15:10:36] 2026-01-10 14:09:48,171 | INFO     | sum of deviations: -61259738488.000015
[2026-01-10 15:10:36] 2026-01-10 14:09:48,172 | INFO     | mean x: 1768044583.0
[2026-01-10 15:10:36] 2026-01-10 14:09:48,172 | INFO     | mean y: 2517519.389067524
[2026-01-10 15:10:36] 2026-01-10 14:09:48,172 | INFO     | intersect: 11614683894.910717
[2026-01-10 15:10:36] 2026-01-10 14:09:48,172 | INFO     | chi2: 0.9733672040183954
[2026-01-10 15:10:36] 2026-01-10 14:09:48,173 | INFO     | current chi2=0.9733672040183954 (change=4.844159188021538 %)
[2026-01-10 15:10:36] 2026-01-10 14:09:48,173 | INFO     | left removable region: 30
[2026-01-10 15:10:36] 2026-01-10 14:09:48,173 | INFO     | sum of square deviations: 7562532492.5
[2026-01-10 15:10:36] 2026-01-10 14:09:48,176 | INFO     | sum of deviations: -9431160681.500002
[2026-01-10 15:10:36] 2026-01-10 14:09:48,177 | INFO     | mean x: 1768044857.5
[2026-01-10 15:10:36] 2026-01-10 14:09:48,177 | INFO     | mean y: 2513491.106896552
[2026-01-10 15:10:36] 2026-01-10 14:09:48,177 | INFO     | intersect: 2207425028.309429
[2026-01-10 15:10:36] 2026-01-10 14:09:48,177 | INFO     | chi2: 0.10354697993601947
[2026-01-10 15:10:36] 2026-01-10 14:09:48,178 | INFO     | current memory leak: -1.25 B/s (using 290 data points, chi2=0.10)
[2026-01-10 15:10:36] 2026-01-10 14:09:48,178 | INFO     | could have reported an average CPU frequency of 2250 MHz (14 samples)
[2026-01-10 15:10:36] 2026-01-10 14:09:48,178 | INFO     | ..............................
[2026-01-10 15:10:36] 2026-01-10 14:09:48,179 | INFO     | . Timing measurements:
[2026-01-10 15:10:36] 2026-01-10 14:09:48,179 | INFO     | . get job = 0 s
[2026-01-10 15:10:36] 2026-01-10 14:09:48,179 | INFO     | . initial setup = 12 s
[2026-01-10 15:10:36] 2026-01-10 14:09:48,179 | INFO     | . payload setup = 153 s
[2026-01-10 15:10:36] 2026-01-10 14:09:48,179 | INFO     | . stage-in = 0 s
[2026-01-10 15:10:36] 2026-01-10 14:09:48,179 | INFO     | . payload execution = 20022 s
[2026-01-10 15:10:36] 2026-01-10 14:09:48,179 | INFO     | . stage-out = 5 s
[2026-01-10 15:10:36] 2026-01-10 14:09:48,179 | INFO     | . log creation = 1 s
[2026-01-10 15:10:36] 2026-01-10 14:09:48,179 | INFO     | ..............................
[2026-01-10 15:10:36] 2026-01-10 14:09:48,472 | INFO     | 
[2026-01-10 15:10:36] 2026-01-10 14:09:48,472 | INFO     | job summary report
[2026-01-10 15:10:36] 2026-01-10 14:09:48,472 | INFO     | --------------------------------------------------
[2026-01-10 15:10:36] 2026-01-10 14:09:48,472 | INFO     | PanDA job id: 6963188640
[2026-01-10 15:10:36] 2026-01-10 14:09:48,472 | INFO     | task id: 47898826
[2026-01-10 15:10:36] 2026-01-10 14:09:48,472 | INFO     | errors: (none)
[2026-01-10 15:10:36] 2026-01-10 14:09:48,473 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 15:10:36] 2026-01-10 14:09:48,473 | INFO     | pilot state: finished 
[2026-01-10 15:10:36] 2026-01-10 14:09:48,473 | INFO     | transexitcode: 0
[2026-01-10 15:10:36] 2026-01-10 14:09:48,473 | INFO     | exeerrorcode: 0
[2026-01-10 15:10:36] 2026-01-10 14:09:48,473 | INFO     | exeerrordiag: 
[2026-01-10 15:10:36] 2026-01-10 14:09:48,473 | INFO     | exitcode: 0
[2026-01-10 15:10:36] 2026-01-10 14:09:48,473 | INFO     | exitmsg: OK
[2026-01-10 15:10:36] 2026-01-10 14:09:48,473 | INFO     | cpuconsumptiontime: 75130 s
[2026-01-10 15:10:36] 2026-01-10 14:09:48,473 | INFO     | nevents: 400
[2026-01-10 15:10:36] 2026-01-10 14:09:48,473 | INFO     | neventsw: 0
[2026-01-10 15:10:36] 2026-01-10 14:09:48,473 | INFO     | pid: 23960
[2026-01-10 15:10:36] 2026-01-10 14:09:48,474 | INFO     | pgrp: 23960
[2026-01-10 15:10:36] 2026-01-10 14:09:48,474 | INFO     | corecount: 8
[2026-01-10 15:10:36] 2026-01-10 14:09:48,474 | INFO     | event service: False
[2026-01-10 15:10:36] 2026-01-10 14:09:48,474 | INFO     | sizes: {0: 2283800, 1: 2283999, 12: 2283999, 22: 2284027, 33: 2284055, 44: 2284111, 54: 2284267, 65: 2284295, 76: 2284323, 87: 2284379, 97: 2284407, 107: 2284977, 
[2026-01-10 15:10:36] 2026-01-10 14:09:48,474 | INFO     | --------------------------------------------------
[2026-01-10 15:10:36] 2026-01-10 14:09:48,474 | INFO     | 
[2026-01-10 15:10:36] 2026-01-10 14:09:48,474 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-10 15:10:36] 2026-01-10 14:09:48,497 | INFO     | time since job start (20517s) is within the limit (349056.0s)
[2026-01-10 15:10:36] 2026-01-10 14:09:49,083 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,083 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,083 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,084 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,084 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,084 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,084 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,084 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,084 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,084 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,084 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,084 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,084 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,085 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,085 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,085 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 15:10:36] 2026-01-10 14:09:49,085 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,085 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 15:10:36] 2026-01-10 14:09:49,085 | INFO     | job 6963188640 has completed (purged errors)
[2026-01-10 15:10:36] 2026-01-10 14:09:49,085 | INFO     | overall cleanup function is called
[2026-01-10 15:10:36] 2026-01-10 14:09:50,094 | INFO     | --- collectZombieJob: --- 10, [23960]
[2026-01-10 15:10:36] 2026-01-10 14:09:50,094 | INFO     | zombie collector waiting for pid 23960
[2026-01-10 15:10:36] 2026-01-10 14:09:50,094 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 15:10:36] 2026-01-10 14:09:50,094 | INFO     | collected zombie processes
[2026-01-10 15:10:36] 2026-01-10 14:09:50,094 | INFO     | will attempt to kill all subprocesses of pid=23960
[2026-01-10 15:10:36] 2026-01-10 14:09:50,176 | INFO     | process IDs to be killed: [23960] (in reverse order)
[2026-01-10 15:10:36] 2026-01-10 14:09:50,950 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 15:10:36] 2026-01-10 14:09:50,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 15:10:36] 2026-01-10 14:09:50,952 | INFO     | did not find any defunct processes belonging to 23960
[2026-01-10 15:10:36] 2026-01-10 14:09:50,954 | INFO     | did not find any defunct processes belonging to 23960
[2026-01-10 15:10:36] 2026-01-10 14:09:50,954 | INFO     | ready for new job
[2026-01-10 15:10:36] 2026-01-10 14:09:50,954 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 15:10:36] 2026-01-10 14:09:50,957 | INFO     | ***************************************
[2026-01-10 15:10:36] 2026-01-10 14:09:50,957 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 15:10:36] 2026-01-10 14:09:50,957 | INFO     | ***************************************
[2026-01-10 15:10:36] 2026-01-10 14:09:50,957 | INFO     | 
[2026-01-10 15:10:36] 2026-01-10 14:09:50,958 | INFO     | pilot is running in a VM
[2026-01-10 15:10:36] 2026-01-10 14:09:50,958 | INFO     | architecture information:
[2026-01-10 15:10:36] 2026-01-10 14:09:50,958 | INFO     | executing command: cat /etc/os-release
[2026-01-10 15:10:36] 2026-01-10 14:09:51,211 | INFO     | cat /etc/os-release:
[2026-01-10 15:10:36] NAME="CentOS Linux"
[2026-01-10 15:10:36] VERSION="7 (Core)"
[2026-01-10 15:10:36] ID="centos"
[2026-01-10 15:10:36] ID_LIKE="rhel fedora"
[2026-01-10 15:10:36] VERSION_ID="7"
[2026-01-10 15:10:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 15:10:36] ANSI_COLOR="0;31"
[2026-01-10 15:10:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 15:10:36] HOME_URL="https://www.centos.org/"
[2026-01-10 15:10:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 15:10:36] 
[2026-01-10 15:10:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 15:10:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 15:10:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 15:10:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 15:10:36] 
[2026-01-10 15:10:36] 2026-01-10 14:09:51,212 | INFO     | ***************************************
[2026-01-10 15:10:36] 2026-01-10 14:09:51,715 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-10 15:10:36] 2026-01-10 14:09:51,974 | INFO     | sufficient remaining disk space (497655218176 B)
[2026-01-10 15:10:36] 2026-01-10 14:09:51,975 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 15:10:36] 2026-01-10 14:09:51,975 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 15:10:36] 2026-01-10 14:09:51,975 | INFO     | update_server=False
[2026-01-10 15:10:36] 2026-01-10 14:09:51,975 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 15:10:36] 2026-01-10 14:09:51,976 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 15:10:36] 2026-01-10 14:09:51,977 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:10:36] 2026-01-10 14:09:51,977 | INFO     | aborting loop
[2026-01-10 15:10:36] 2026-01-10 14:09:52,204 | INFO     | all job control threads have been joined
[2026-01-10 15:10:36] 2026-01-10 14:09:52,735 | INFO     | all data control threads have been joined
[2026-01-10 15:10:36] 2026-01-10 14:09:52,981 | INFO     | [job] retrieve thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:09:52,983 | INFO     | [job] job monitor thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:09:53,210 | INFO     | [job] control thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:09:53,332 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 15:10:36] 2026-01-10 14:09:53,467 | INFO     | all payload control threads have been joined
[2026-01-10 15:10:36] 2026-01-10 14:09:53,509 | INFO     | [payload] validate_post thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:09:53,573 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:09:53,573 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:09:53,741 | INFO     | [data] control thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:09:53,773 | INFO     | [data] copytool_in thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:09:53,983 | INFO     | [data] copytool_out thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:09:54,032 | INFO     | [job] validate thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:09:54,254 | INFO     | [payload] failed_post thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:09:54,302 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:09:54,338 | INFO     | [job] queue monitor thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:09:54,461 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:09:54,473 | INFO     | [payload] control thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:09:54,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 15:10:36] 2026-01-10 14:09:58,541 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 15:10:36] 2026-01-10 14:10:21,637 | INFO     | PID=17472 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 15:10:36] 2026-01-10 14:10:21,638 | INFO     | .. there are 2 such processes running
[2026-01-10 15:10:36] 2026-01-10 14:10:21,638 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 15:10:36] 2026-01-10 14:10:21,638 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 15:10:36] 2026-01-10 14:10:21,638 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 15:10:36] 2026-01-10 14:10:26,197 | INFO     | [monitor] cgroup control has ended
[2026-01-10 15:10:36] 2026-01-10 14:10:26,318 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139888991893312)>', '<ExcThread(monitor, started 139888427005696)>']
[2026-01-10 15:10:36] 2026-01-10 14:10:26,669 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 15:10:36] 2026-01-10 14:10:26,669 | INFO     | [monitor] control thread has ended
[2026-01-10 15:10:36] 2026-01-10 14:10:31,344 | INFO     | all workflow threads have been joined
[2026-01-10 15:10:36] 2026-01-10 14:10:31,344 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 15:10:36] 2026-01-10 14:10:31,344 | INFO     | traces error code: 0
[2026-01-10 15:10:36] 2026-01-10 14:10:31,345 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 15:10:36] 2026-01-10 14:10:31,717 [wrapper] ==== pilot stdout END ====
[2026-01-10 15:10:36] 2026-01-10 14:10:31,819 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 15:10:36] 2026-01-10 14:10:31,908 [wrapper] pilotpid: 17472
[2026-01-10 15:10:36] 2026-01-10 14:10:32,012 [wrapper] Pilot exit status: 0
[2026-01-10 15:10:36] 2026-01-10 14:10:32,554 [wrapper] pandaids: 6963188640
[2026-01-10 15:10:36] 2026-01-10 14:10:33,611 [wrapper] cleanup supervisor_pilot 21457 17473
[2026-01-10 15:10:36] 2026-01-10 14:10:33,697 [wrapper] Test setup, not cleaning
[2026-01-10 15:10:36] 2026-01-10 14:10:33,793 [wrapper] apfmon messages muted
[2026-01-10 15:10:36] 2026-01-10 14:10:33,878 [wrapper] ==== wrapper stdout END ====
[2026-01-10 15:10:36] 2026-01-10 14:10:33,959 [wrapper] ==== wrapper stderr END ====
[2026-01-10 15:10:36]  *** Error codes and diagnostics ***
[2026-01-10 15:10:36]     "exeErrorCode": 0,
[2026-01-10 15:10:36]     "exeErrorDiag": "",
[2026-01-10 15:10:36]     "pilotErrorCode": 0,
[2026-01-10 15:10:36]     "pilotErrorDiag": "",
[2026-01-10 15:10:36]  *** Listing of results directory ***
[2026-01-10 15:10:36] total 448576
[2026-01-10 15:10:36] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:21 queuedata.json
[2026-01-10 15:10:36] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 15:10:36] -rwx------. 1 boinc boinc     36322 Jan  9 05:22 runpilot2-wrapper.sh
[2026-01-10 15:10:36] -rw-r--r--. 1 boinc boinc       100 Jan 10 09:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 15:10:36] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 09:23 run_atlas
[2026-01-10 15:10:36] -rw-r--r--. 1 boinc boinc       105 Jan 10 09:23 job.xml
[2026-01-10 15:10:36] -rw-r--r--. 1 boinc boinc      6391 Jan 10 09:23 init_data.xml
[2026-01-10 15:10:36] -rw-r--r--. 2 boinc boinc 224517050 Jan 10 09:23 EVNT.47898824._001448.pool.root.1
[2026-01-10 15:10:36] -rw-r--r--. 2 boinc boinc     15847 Jan 10 09:23 start_atlas.sh
[2026-01-10 15:10:36] drwxrwx--x. 2 boinc boinc        68 Jan 10 09:23 shared
[2026-01-10 15:10:36] -rw-r--r--. 2 boinc boinc    592399 Jan 10 09:23 input.tar.gz
[2026-01-10 15:10:36] -rw-r--r--. 1 boinc boinc         0 Jan 10 09:23 boinc_lockfile
[2026-01-10 15:10:36] -rw-r--r--. 1 boinc boinc      2520 Jan 10 09:23 pandaJob.out
[2026-01-10 15:10:36] -rw-------. 1 boinc boinc    989548 Jan 10 09:27 agis_schedconf.cvmfs.json
[2026-01-10 15:10:36] drwx------. 5 boinc boinc      4096 Jan 10 09:27 pilot3
[2026-01-10 15:10:36] -rw-------. 1 boinc boinc 224430451 Jan 10 15:06 HITS.47898826._037727.pool.root.1
[2026-01-10 15:10:36] -rw-r--r--. 1 boinc boinc       531 Jan 10 15:06 boinc_task_state.xml
[2026-01-10 15:10:36] -rw-------. 1 boinc boinc      1023 Jan 10 15:07 memory_monitor_summary.json
[2026-01-10 15:10:36] -rw-------. 1 boinc boinc   1516240 Jan 10 15:07 agis_ddmendpoints.agis.ALL.json
[2026-01-10 15:10:36] -rw-------. 1 boinc boinc    524833 Jan 10 15:07 log.47898826._037727.job.log.tgz.1
[2026-01-10 15:10:36] -rw-------. 1 boinc boinc        95 Jan 10 15:09 pilot_heartbeat.json
[2026-01-10 15:10:36] -rw-------. 1 boinc boinc      7779 Jan 10 15:09 heartbeat.json
[2026-01-10 15:10:36] -rw-r--r--. 1 boinc boinc      8192 Jan 10 15:10 boinc_mmap_file
[2026-01-10 15:10:36] -rw-r--r--. 1 boinc boinc        28 Jan 10 15:10 wrapper_checkpoint.txt
[2026-01-10 15:10:36] -rw-------. 1 boinc boinc      4884 Jan 10 15:10 pilotlog.txt
[2026-01-10 15:10:36] -rw-------. 1 boinc boinc   2722482 Jan 10 15:10 log.47898826._037727.job.log.1
[2026-01-10 15:10:36] -rw-------. 1 boinc boinc       357 Jan 10 15:10 output.list
[2026-01-10 15:10:36] -rw-r--r--. 1 boinc boinc       620 Jan 10 15:10 runtime_log
[2026-01-10 15:10:36] -rw-------. 1 boinc boinc   3266560 Jan 10 15:10 result.tar.gz
[2026-01-10 15:10:36] -rw-r--r--. 1 boinc boinc      8817 Jan 10 15:10 runtime_log.err
[2026-01-10 15:10:36] -rw-------. 1 boinc boinc       656 Jan 10 15:10 7zcKDm1BJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmT6lKDm7s5Aum.diag
[2026-01-10 15:10:36] -rw-r--r--. 1 boinc boinc     20776 Jan 10 15:10 stderr.txt
[2026-01-10 15:10:36] HITS file was successfully produced:
[2026-01-10 15:10:36] -rw-------. 1 boinc boinc 224430451 Jan 10 15:06 shared/HITS.pool.root.1
[2026-01-10 15:10:36]  *** Contents of shared directory: ***
[2026-01-10 15:10:36] total 442216
[2026-01-10 15:10:36] -rw-r--r--. 2 boinc boinc 224517050 Jan 10 09:23 ATLAS.root_0
[2026-01-10 15:10:36] -rw-r--r--. 2 boinc boinc     15847 Jan 10 09:23 start_atlas.sh
[2026-01-10 15:10:36] -rw-r--r--. 2 boinc boinc    592399 Jan 10 09:23 input.tar.gz
[2026-01-10 15:10:36] -rw-------. 1 boinc boinc 224430451 Jan 10 15:06 HITS.pool.root.1
[2026-01-10 15:10:36] -rw-------. 1 boinc boinc   3266560 Jan 10 15:10 result.tar.gz
15:10:38 (13753): run_atlas exited; CPU time 75321.797214
15:10:38 (13753): called boinc_finish(0)

</stderr_txt>
]]>

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