Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:02:16 (3212161): wrapper (7.7.26015): starting
11:02:16 (3212161): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 11:02:16] Arguments: --nthreads 12
[2026-01-10 11:02:16] Threads: 12
[2026-01-10 11:02:16] Checking for CVMFS
[2026-01-10 11:02:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 11:02:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 11:02:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 11:02:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 11:02:16] 2.13.3.0 2283357 3135 143636 154974 1 119 39874478 46080001 18428 130560 0 18112572 99.878 5186731 22776 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2026-01-10 11:02:16] CVMFS is ok
[2026-01-10 11:02:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 11:02:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 11:02:16] Further information can be found at the LHC@home message board.
[2026-01-10 11:02:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 11:02:16] Checking for apptainer binary...
[2026-01-10 11:02:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 11:02:16] Running /usr/bin/apptainer --version
[2026-01-10 11:02:16] apptainer version 1.4.5-2.el9
[2026-01-10 11:02:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 11:02:16] mff2102.farm.particle.cz
[2026-01-10 11:02:16] apptainer works
[2026-01-10 11:02:16] Set ATHENA_PROC_NUMBER=12
[2026-01-10 11:02:16] Set ATHENA_CORE_NUMBER=12
[2026-01-10 11:02:16] Starting ATLAS job with PandaID=6963167919
[2026-01-10 11:02:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 13:53:49]  *** The last 200 lines of the pilot log: ***
[2026-01-10 13:53:49] 2026-01-10 12:16:47,939 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2804.4840104166656
[2026-01-10 13:53:49] 2026-01-10 12:16:47,968 | INFO     | using path: /scratch/.boinc/slots/4/PanDA_Pilot-6963167919/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 13:53:49] 2026-01-10 12:16:47,968 | INFO     | extracted standard info from prmon json
[2026-01-10 13:53:49] 2026-01-10 12:16:47,968 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 13:53:49] 2026-01-10 12:16:47,968 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 13:53:49] 2026-01-10 12:16:47,973 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 13:53:49] 2026-01-10 12:16:47,973 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 13:53:49] 2026-01-10 12:16:47,975 | INFO     | fitting pss+swap vs Time
[2026-01-10 13:53:49] 2026-01-10 12:16:47,975 | INFO     | sum of square deviations: 697065795.5114506
[2026-01-10 13:53:49] 2026-01-10 12:16:47,976 | INFO     | sum of deviations: 13854857817.603046
[2026-01-10 13:53:49] 2026-01-10 12:16:47,976 | INFO     | mean x: 1768043345.0610688
[2026-01-10 13:53:49] 2026-01-10 12:16:47,976 | INFO     | mean y: 2631560.5496183205
[2026-01-10 13:53:49] 2026-01-10 12:16:47,976 | INFO     | intersect: -35138942332.352715
[2026-01-10 13:53:49] 2026-01-10 12:16:47,976 | INFO     | chi2: 2.045613089536348
[2026-01-10 13:53:49] 2026-01-10 12:16:47,977 | INFO     | sum of square deviations: 620257492.992063
[2026-01-10 13:53:49] 2026-01-10 12:16:47,981 | INFO     | sum of deviations: 21918967433.444443
[2026-01-10 13:53:49] 2026-01-10 12:16:47,981 | INFO     | mean x: 1768043192.563492
[2026-01-10 13:53:49] 2026-01-10 12:16:47,982 | INFO     | mean y: 2647029.4444444445
[2026-01-10 13:53:49] 2026-01-10 12:16:47,982 | INFO     | intersect: -62477341679.403336
[2026-01-10 13:53:49] 2026-01-10 12:16:47,982 | INFO     | chi2: 1.344699540661518
[2026-01-10 13:53:49] 2026-01-10 12:16:47,982 | INFO     | current chi2=1.344699540661518 (change=34.26422877620991 %)
[2026-01-10 13:53:49] 2026-01-10 12:16:47,982 | INFO     | sum of square deviations: 549302322.5950432
[2026-01-10 13:53:49] 2026-01-10 12:16:47,983 | INFO     | sum of deviations: 21000567832.528923
[2026-01-10 13:53:49] 2026-01-10 12:16:47,983 | INFO     | mean x: 1768043040.0578513
[2026-01-10 13:53:49] 2026-01-10 12:16:47,983 | INFO     | mean y: 2645054.495867769
[2026-01-10 13:53:49] 2026-01-10 12:16:47,983 | INFO     | intersect: -67592022337.68715
[2026-01-10 13:53:49] 2026-01-10 12:16:47,983 | INFO     | chi2: 1.3456051379165617
[2026-01-10 13:53:49] 2026-01-10 12:16:47,983 | INFO     | current chi2=1.3456051379165617 (change=-0.06734569527688496 %)
[2026-01-10 13:53:49] 2026-01-10 12:16:47,983 | INFO     | right removable region: 120
[2026-01-10 13:53:49] 2026-01-10 12:16:47,983 | INFO     | sum of square deviations: 620252612.992063
[2026-01-10 13:53:49] 2026-01-10 12:16:47,984 | INFO     | sum of deviations: -6232066871.063492
[2026-01-10 13:53:49] 2026-01-10 12:16:47,984 | INFO     | mean x: 1768043497.563492
[2026-01-10 13:53:49] 2026-01-10 12:16:47,984 | INFO     | mean y: 2670740.507936508
[2026-01-10 13:53:49] 2026-01-10 12:16:47,984 | INFO     | intersect: 17767312238.125717
[2026-01-10 13:53:49] 2026-01-10 12:16:47,984 | INFO     | chi2: 0.7255865920871633
[2026-01-10 13:53:49] 2026-01-10 12:16:47,984 | INFO     | current chi2=0.7255865920871633 (change=64.52962704439761 %)
[2026-01-10 13:53:49] 2026-01-10 12:16:47,984 | INFO     | sum of square deviations: 549300005.4710754
[2026-01-10 13:53:49] 2026-01-10 12:16:47,989 | INFO     | sum of deviations: -6171624105.958677
[2026-01-10 13:53:49] 2026-01-10 12:16:47,989 | INFO     | mean x: 1768043650.0661156
[2026-01-10 13:53:49] 2026-01-10 12:16:47,989 | INFO     | mean y: 2670595.619834711
[2026-01-10 13:53:49] 2026-01-10 12:16:47,989 | INFO     | intersect: 19867408812.357002
[2026-01-10 13:53:49] 2026-01-10 12:16:47,990 | INFO     | chi2: 0.7260134171737596
[2026-01-10 13:53:49] 2026-01-10 12:16:47,990 | INFO     | current chi2=0.7260134171737596 (change=-0.058824831005839705 %)
[2026-01-10 13:53:49] 2026-01-10 12:16:47,990 | INFO     | left removable region: 20
[2026-01-10 13:53:49] 2026-01-10 12:16:47,990 | INFO     | sum of square deviations: 310052514.50999916
[2026-01-10 13:53:49] 2026-01-10 12:16:47,990 | INFO     | sum of deviations: 1347855366.0099993
[2026-01-10 13:53:49] 2026-01-10 12:16:47,990 | INFO     | mean x: 1768043619.57
[2026-01-10 13:53:49] 2026-01-10 12:16:47,990 | INFO     | mean y: 2690462.07
[2026-01-10 13:53:49] 2026-01-10 12:16:47,991 | INFO     | intersect: -7683320676.215133
[2026-01-10 13:53:49] 2026-01-10 12:16:47,991 | INFO     | chi2: 9.421018822408872e-05
[2026-01-10 13:53:49] 2026-01-10 12:16:47,991 | INFO     | current memory leak: 4.35 B/s (using 100 data points, chi2=0.00)
[2026-01-10 13:53:49] 2026-01-10 12:16:47,991 | INFO     | could have reported an average CPU frequency of 2860 MHz (8 samples)
[2026-01-10 13:53:49] 2026-01-10 12:16:47,991 | INFO     | ..............................
[2026-01-10 13:53:49] 2026-01-10 12:16:47,991 | INFO     | . Timing measurements:
[2026-01-10 13:53:49] 2026-01-10 12:16:47,992 | INFO     | . get job = 0 s
[2026-01-10 13:53:49] 2026-01-10 12:16:47,992 | INFO     | . initial setup = 1 s
[2026-01-10 13:53:49] 2026-01-10 12:16:47,992 | INFO     | . payload setup = 7 s
[2026-01-10 13:53:49] 2026-01-10 12:16:47,992 | INFO     | . stage-in = 0 s
[2026-01-10 13:53:49] 2026-01-10 12:16:47,992 | INFO     | . payload execution = 7975 s
[2026-01-10 13:53:49] 2026-01-10 12:16:47,992 | INFO     | . stage-out = 1 s
[2026-01-10 13:53:49] 2026-01-10 12:16:47,992 | INFO     | . log creation = 0 s
[2026-01-10 13:53:49] 2026-01-10 12:16:47,992 | INFO     | ..............................
[2026-01-10 13:53:49] 2026-01-10 12:16:48,112 | INFO     | 
[2026-01-10 13:53:49] 2026-01-10 12:16:48,113 | INFO     | job summary report
[2026-01-10 13:53:49] 2026-01-10 12:16:48,113 | INFO     | --------------------------------------------------
[2026-01-10 13:53:49] 2026-01-10 12:16:48,113 | INFO     | PanDA job id: 6963167919
[2026-01-10 13:53:49] 2026-01-10 12:16:48,113 | INFO     | task id: 47898826
[2026-01-10 13:53:49] 2026-01-10 12:16:48,113 | INFO     | errors: (none)
[2026-01-10 13:53:49] 2026-01-10 12:16:48,113 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 13:53:49] 2026-01-10 12:16:48,113 | INFO     | pilot state: finished 
[2026-01-10 13:53:49] 2026-01-10 12:16:48,113 | INFO     | transexitcode: 0
[2026-01-10 13:53:49] 2026-01-10 12:16:48,113 | INFO     | exeerrorcode: 0
[2026-01-10 13:53:49] 2026-01-10 12:16:48,113 | INFO     | exeerrordiag: 
[2026-01-10 13:53:49] 2026-01-10 12:16:48,113 | INFO     | exitcode: 0
[2026-01-10 13:53:49] 2026-01-10 12:16:48,113 | INFO     | exitmsg: OK
[2026-01-10 13:53:49] 2026-01-10 12:16:48,113 | INFO     | cpuconsumptiontime: 54154 s
[2026-01-10 13:53:49] 2026-01-10 12:16:48,114 | INFO     | nevents: 400
[2026-01-10 13:53:49] 2026-01-10 12:16:48,114 | INFO     | neventsw: 0
[2026-01-10 13:53:49] 2026-01-10 12:16:48,114 | INFO     | pid: 3303704
[2026-01-10 13:53:49] 2026-01-10 12:16:48,114 | INFO     | pgrp: 3303704
[2026-01-10 13:53:49] 2026-01-10 12:16:48,114 | INFO     | corecount: 12
[2026-01-10 13:53:49] 2026-01-10 12:16:48,114 | INFO     | event service: False
[2026-01-10 13:53:49] 2026-01-10 12:16:48,114 | INFO     | sizes: {0: 2283801, 1: 2284000, 6: 2284262, 11: 2284290, 7986: 2312252, 7989: 2321252, 7991: 2321436, 8042: 2321630}
[2026-01-10 13:53:49] 2026-01-10 12:16:48,114 | INFO     | --------------------------------------------------
[2026-01-10 13:53:49] 2026-01-10 12:16:48,114 | INFO     | 
[2026-01-10 13:53:49] 2026-01-10 12:16:48,114 | INFO     | executing command: ls -lF /scratch/.boinc/slots/4
[2026-01-10 13:53:49] 2026-01-10 12:16:48,124 | INFO     | time since job start (8059s) is within the limit (349056.0s)
[2026-01-10 13:53:49] 2026-01-10 12:16:48,329 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,330 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,330 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,330 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,330 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,330 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,330 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,330 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,330 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,330 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,330 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,331 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,331 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,331 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,331 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,331 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,331 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,331 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 13:53:49] 2026-01-10 12:16:48,331 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,331 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 13:53:49] 2026-01-10 12:16:48,331 | INFO     | job 6963167919 has completed (purged errors)
[2026-01-10 13:53:49] 2026-01-10 12:16:48,331 | INFO     | overall cleanup function is called
[2026-01-10 13:53:49] 2026-01-10 12:16:49,351 | INFO     | --- collectZombieJob: --- 10, [3303704]
[2026-01-10 13:53:49] 2026-01-10 12:16:49,351 | INFO     | zombie collector waiting for pid 3303704
[2026-01-10 13:53:49] 2026-01-10 12:16:49,351 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 13:53:49] 2026-01-10 12:16:49,351 | INFO     | collected zombie processes
[2026-01-10 13:53:49] 2026-01-10 12:16:49,352 | INFO     | will attempt to kill all subprocesses of pid=3303704
[2026-01-10 13:53:49] 2026-01-10 12:16:50,060 | INFO     | process IDs to be killed: [3303704] (in reverse order)
[2026-01-10 13:53:49] 2026-01-10 12:16:50,279 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 13:53:49] 2026-01-10 12:16:50,280 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 13:53:49] 2026-01-10 12:16:50,296 | INFO     | did not find any defunct processes belonging to 3303704
[2026-01-10 13:53:49] 2026-01-10 12:16:50,308 | INFO     | did not find any defunct processes belonging to 3303704
[2026-01-10 13:53:49] 2026-01-10 12:16:50,308 | INFO     | ready for new job
[2026-01-10 13:53:49] 2026-01-10 12:16:50,308 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 13:53:49] 2026-01-10 12:16:50,318 | INFO     | ***************************************
[2026-01-10 13:53:49] 2026-01-10 12:16:50,318 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 13:53:49] 2026-01-10 12:16:50,318 | INFO     | ***************************************
[2026-01-10 13:53:49] 2026-01-10 12:16:50,318 | INFO     | 
[2026-01-10 13:53:49] 2026-01-10 12:16:50,340 | INFO     | architecture information:
[2026-01-10 13:53:49] 2026-01-10 12:16:50,341 | INFO     | executing command: cat /etc/os-release
[2026-01-10 13:53:49] 2026-01-10 12:16:50,364 | INFO     | cat /etc/os-release:
[2026-01-10 13:53:49] NAME="CentOS Linux"
[2026-01-10 13:53:49] VERSION="7 (Core)"
[2026-01-10 13:53:49] ID="centos"
[2026-01-10 13:53:49] ID_LIKE="rhel fedora"
[2026-01-10 13:53:49] VERSION_ID="7"
[2026-01-10 13:53:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 13:53:49] ANSI_COLOR="0;31"
[2026-01-10 13:53:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 13:53:49] HOME_URL="https://www.centos.org/"
[2026-01-10 13:53:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 13:53:49] 
[2026-01-10 13:53:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 13:53:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 13:53:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 13:53:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 13:53:49] 
[2026-01-10 13:53:49] 2026-01-10 12:16:50,364 | INFO     | ***************************************
[2026-01-10 13:53:49] 2026-01-10 12:16:50,876 | INFO     | executing command: df -mP /scratch/.boinc/slots/4
[2026-01-10 13:53:49] 2026-01-10 12:16:50,913 | INFO     | sufficient remaining disk space (1587615367168 B)
[2026-01-10 13:53:49] 2026-01-10 12:16:50,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 13:53:49] 2026-01-10 12:16:50,913 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 13:53:49] 2026-01-10 12:16:50,913 | INFO     | update_server=False
[2026-01-10 13:53:49] 2026-01-10 12:16:50,914 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 13:53:49] 2026-01-10 12:16:51,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 13:53:49] 2026-01-10 12:16:51,237 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:53:49] 2026-01-10 12:16:51,237 | INFO     | aborting loop
[2026-01-10 13:53:49] 2026-01-10 12:16:51,333 | INFO     | all payload control threads have been joined
[2026-01-10 13:53:49] 2026-01-10 12:16:51,502 | INFO     | all data control threads have been joined
[2026-01-10 13:53:49] 2026-01-10 12:16:51,919 | INFO     | [job] retrieve thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:16:52,023 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:16:52,246 | INFO     | [job] job monitor thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:16:52,343 | INFO     | [payload] control thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:16:52,386 | INFO     | all job control threads have been joined
[2026-01-10 13:53:49] 2026-01-10 12:16:52,410 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:16:52,513 | INFO     | [data] control thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:16:52,785 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 13:53:49] 2026-01-10 12:16:52,815 | INFO     | [payload] validate_post thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:16:53,032 | INFO     | [data] copytool_out thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:16:53,093 | INFO     | [payload] failed_post thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:16:53,129 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 13:53:49] 2026-01-10 12:16:53,205 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:16:53,239 | INFO     | [job] validate thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:16:53,249 | INFO     | [data] copytool_in thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:16:53,395 | INFO     | [job] control thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:16:54,134 | INFO     | [job] queue monitor thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:16:56,794 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:17:01,732 | INFO     | job.realtimelogging is not enabled
[2026-01-10 13:53:49] 2026-01-10 12:17:02,737 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 13:53:49] 2026-01-10 12:17:22,226 | INFO     | PID=3234590 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 13:53:49] 2026-01-10 12:17:22,227 | INFO     | .. there are 14 such processes running
[2026-01-10 13:53:49] 2026-01-10 12:17:22,227 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 13:53:49] 2026-01-10 12:17:22,227 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 13:53:49] 2026-01-10 12:17:22,227 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 13:53:49] 2026-01-10 12:17:28,025 [wrapper] supervise_pilot (15 min periods counter: 10)
[2026-01-10 13:53:49] 2026-01-10 12:17:42,303 | INFO     | [monitor] cgroup control has ended
[2026-01-10 13:53:49] 2026-01-10 12:17:43,310 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971692754752)>', '<ExcThread(monitor, started 139971172235008)>']
[2026-01-10 13:53:49] 2026-01-10 12:17:43,366 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 13:53:49] 2026-01-10 12:17:43,366 | INFO     | [monitor] control thread has ended
[2026-01-10 13:53:49] 2026-01-10 12:17:48,336 | INFO     | all workflow threads have been joined
[2026-01-10 13:53:49] 2026-01-10 12:17:48,336 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 13:53:49] 2026-01-10 12:17:48,337 | INFO     | traces error code: 0
[2026-01-10 13:53:49] 2026-01-10 12:17:48,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 13:53:49] 2026-01-10 12:17:48,778 [wrapper] ==== pilot stdout END ====
[2026-01-10 13:53:49] 2026-01-10 12:17:48,837 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 13:53:49] 2026-01-10 12:17:48,880 [wrapper] pilotpid: 3234590
[2026-01-10 13:53:49] 2026-01-10 12:17:48,910 [wrapper] Pilot exit status: 0
[2026-01-10 13:53:49] 2026-01-10 12:17:49,045 [wrapper] pandaids: 6963167919
[2026-01-10 13:53:49] 2026-01-10 12:17:49,542 [wrapper] cleanup supervisor_pilot 3555020 3234591
[2026-01-10 13:53:49] 2026-01-10 12:17:49,593 [wrapper] Test setup, not cleaning
[2026-01-10 13:53:49] 2026-01-10 12:17:49,617 [wrapper] apfmon messages muted
[2026-01-10 13:53:49] 2026-01-10 12:17:49,672 [wrapper] ==== wrapper stdout END ====
[2026-01-10 13:53:49] 2026-01-10 12:17:49,715 [wrapper] ==== wrapper stderr END ====
[2026-01-10 13:53:49]  *** Error codes and diagnostics ***
[2026-01-10 13:53:49]     "exeErrorCode": 0,
[2026-01-10 13:53:49]     "exeErrorDiag": "",
[2026-01-10 13:53:49]     "pilotErrorCode": 0,
[2026-01-10 13:53:49]     "pilotErrorDiag": "",
[2026-01-10 13:53:49]  *** Listing of results directory ***
[2026-01-10 13:53:49] total 445396
[2026-01-10 13:53:49] -rw-r--r-- 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-10 13:53:49] -rwx------ 1 boinc boinc     36322 Jan  9 01:59 runpilot2-wrapper.sh
[2026-01-10 13:53:49] -rw-r--r-- 1 boinc boinc      5112 Jan  9 02:02 queuedata.json
[2026-01-10 13:53:49] -rw-r--r-- 1 boinc boinc       100 Jan 10 11:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 13:53:49] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 11:02 run_atlas
[2026-01-10 13:53:49] -rw-r--r-- 1 boinc boinc       105 Jan 10 11:02 job.xml
[2026-01-10 13:53:49] -rw-r--r-- 1 boinc boinc      6675 Jan 10 11:02 init_data.xml
[2026-01-10 13:53:49] -rw-r--r-- 2 boinc boinc 225248561 Jan 10 11:02 EVNT.47898824._001343.pool.root.1
[2026-01-10 13:53:49] -rw-r--r-- 2 boinc boinc     15847 Jan 10 11:02 start_atlas.sh
[2026-01-10 13:53:49] drwxrwx--x 2 boinc boinc      4096 Jan 10 11:02 shared
[2026-01-10 13:53:49] -rw-r--r-- 2 boinc boinc    592402 Jan 10 11:02 input.tar.gz
[2026-01-10 13:53:49] -rw-r--r-- 1 boinc boinc         0 Jan 10 11:02 boinc_lockfile
[2026-01-10 13:53:49] -rw-r--r-- 1 boinc boinc      2520 Jan 10 11:02 pandaJob.out
[2026-01-10 13:53:49] -rw------- 1 boinc boinc    989548 Jan 10 11:02 agis_schedconf.cvmfs.json
[2026-01-10 13:53:49] -rw------- 1 boinc boinc   1516240 Jan 10 11:02 agis_ddmendpoints.agis.ALL.json
[2026-01-10 13:53:49] drwx------ 5 boinc boinc      4096 Jan 10 11:02 pilot3
[2026-01-10 13:53:49] -rw------- 1 boinc boinc 223792029 Jan 10 13:14 HITS.47898826._036121.pool.root.1
[2026-01-10 13:53:49] -rw-r--r-- 1 boinc boinc       528 Jan 10 13:14 boinc_task_state.xml
[2026-01-10 13:53:49] -rw------- 1 boinc boinc      1023 Jan 10 13:15 memory_monitor_summary.json
[2026-01-10 13:53:49] -rw------- 1 boinc boinc    444912 Jan 10 13:15 log.47898826._036121.job.log.tgz.1
[2026-01-10 13:53:49] -rw------- 1 boinc boinc        95 Jan 10 13:16 pilot_heartbeat.json
[2026-01-10 13:53:49] -rw------- 1 boinc boinc      7773 Jan 10 13:16 heartbeat.json
[2026-01-10 13:53:49] -rw------- 1 boinc boinc      4899 Jan 10 13:17 pilotlog.txt
[2026-01-10 13:53:49] -rw------- 1 boinc boinc   1120146 Jan 10 13:17 log.47898826._036121.job.log.1
[2026-01-10 13:53:49] -rw------- 1 boinc boinc       357 Jan 10 13:17 output.list
[2026-01-10 13:53:49] -rw-r--r-- 1 boinc boinc       620 Jan 10 13:17 runtime_log
[2026-01-10 13:53:49] -rw------- 1 boinc boinc   1587200 Jan 10 13:17 result.tar.gz
[2026-01-10 13:53:49] -rw------- 1 boinc boinc       665 Jan 10 13:17 w4QODmX1Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmL0lKDmh6GuVn.diag
[2026-01-10 13:53:49] -rw-r--r-- 1 boinc boinc      8880 Jan 10 13:17 runtime_log.err
[2026-01-10 13:53:49] -rw-r--r-- 1 boinc boinc        26 Jan 10 13:53 wrapper_checkpoint.txt
[2026-01-10 13:53:49] -rw-r--r-- 1 boinc boinc      8192 Jan 10 13:53 boinc_mmap_file
[2026-01-10 13:53:49] -rw-r--r-- 1 boinc boinc     21171 Jan 10 13:53 stderr.txt
[2026-01-10 13:53:49] HITS file was successfully produced:
[2026-01-10 13:53:49] -rw------- 1 boinc boinc 223792029 Jan 10 13:14 shared/HITS.pool.root.1
[2026-01-10 13:53:49]  *** Contents of shared directory: ***
[2026-01-10 13:53:49] total 440672
[2026-01-10 13:53:49] -rw-r--r-- 2 boinc boinc 225248561 Jan 10 11:02 ATLAS.root_0
[2026-01-10 13:53:49] -rw-r--r-- 2 boinc boinc     15847 Jan 10 11:02 start_atlas.sh
[2026-01-10 13:53:49] -rw-r--r-- 2 boinc boinc    592402 Jan 10 11:02 input.tar.gz
[2026-01-10 13:53:49] -rw------- 1 boinc boinc 223792029 Jan 10 13:14 HITS.pool.root.1
[2026-01-10 13:53:49] -rw------- 1 boinc boinc   1587200 Jan 10 13:17 result.tar.gz
13:53:51 (3212161): run_atlas exited; CPU time 54347.631179
13:53:51 (3212161): called boinc_finish(0)

</stderr_txt>
]]>

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