Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:03:17 (3197303): wrapper (7.7.26015): starting
20:03:17 (3197303): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 20:03:17] Arguments: --nthreads 12
[2026-01-09 20:03:17] Threads: 12
[2026-01-09 20:03:17] Checking for CVMFS
[2026-01-09 20:03:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:03:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:03:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:03:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:03:20] 2.13.3.0 8602 94079 414980 154962 3 265 19619562 21042177 23910 16776704 0 375670668 99.431 535608020 33279 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 20:03:20] CVMFS is ok
[2026-01-09 20:03:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:03:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:03:20] Further information can be found at the LHC@home message board.
[2026-01-09 20:03:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:03:20] Checking for apptainer binary...
[2026-01-09 20:03:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:03:20] Running /usr/bin/apptainer --version
[2026-01-09 20:03:20] apptainer version 1.4.5-2.el9
[2026-01-09 20:03:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:03:21] c-16-16.aglt2.org
[2026-01-09 20:03:21] apptainer works
[2026-01-09 20:03:21] Set ATHENA_PROC_NUMBER=12
[2026-01-09 20:03:21] Set ATHENA_CORE_NUMBER=12
[2026-01-09 20:03:21] Starting ATLAS job with PandaID=6963190093
[2026-01-09 20:03:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:43:49]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:43:49] 2026-01-10 22:43:02,778 | INFO     | time since job start (77939s) is within the limit (349056.0s)
[2026-01-10 17:43:49] 2026-01-10 22:43:04,253 | INFO     | monitor loop #3567: job 0:6963190093 is in state 'finished'
[2026-01-10 17:43:49] 2026-01-10 22:43:04,253 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 17:43:49] 2026-01-10 22:43:04,786 | INFO     | time since job start (77941s) is within the limit (349056.0s)
[2026-01-10 17:43:49] 2026-01-10 22:43:06,764 | INFO     | monitor loop #3568: job 0:6963190093 is in state 'finished'
[2026-01-10 17:43:49] 2026-01-10 22:43:06,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 17:43:49] 2026-01-10 22:43:06,793 | INFO     | time since job start (77943s) is within the limit (349056.0s)
[2026-01-10 17:43:49] 2026-01-10 22:43:07,435 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-10 17:43:49] 2026-01-10 22:43:07,444 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2900.003475
[2026-01-10 17:43:49] 2026-01-10 22:43:07,452 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963190093/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 17:43:49] 2026-01-10 22:43:07,453 | INFO     | extracted standard info from prmon json
[2026-01-10 17:43:49] 2026-01-10 22:43:07,453 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 17:43:49] 2026-01-10 22:43:07,453 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 17:43:49] 2026-01-10 22:43:07,454 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 17:43:49] 2026-01-10 22:43:07,454 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 17:43:49] 2026-01-10 22:43:07,486 | INFO     | fitting pss+swap vs Time
[2026-01-10 17:43:49] 2026-01-10 22:43:07,489 | INFO     | sum of square deviations: 644211642585.4807
[2026-01-10 17:43:49] 2026-01-10 22:43:07,538 | INFO     | sum of deviations: 851457134812.6978
[2026-01-10 17:43:49] 2026-01-10 22:43:07,538 | INFO     | mean x: 1768046032.6888714
[2026-01-10 17:43:49] 2026-01-10 22:43:07,538 | INFO     | mean y: 2702561.457680251
[2026-01-10 17:43:49] 2026-01-10 22:43:07,538 | INFO     | intersect: -2334131034.3593493
[2026-01-10 17:43:49] 2026-01-10 22:43:07,540 | INFO     | chi2: 3.062448290491879
[2026-01-10 17:43:49] 2026-01-10 22:43:07,542 | INFO     | sum of square deviations: 636668689408.3866
[2026-01-10 17:43:49] 2026-01-10 22:43:07,590 | INFO     | sum of deviations: 931696174925.4199
[2026-01-10 17:43:49] 2026-01-10 22:43:07,590 | INFO     | mean x: 1768045880.1935484
[2026-01-10 17:43:49] 2026-01-10 22:43:07,591 | INFO     | mean y: 2704177.9291896145
[2026-01-10 17:43:49] 2026-01-10 22:43:07,591 | INFO     | intersect: -2584640874.643891
[2026-01-10 17:43:49] 2026-01-10 22:43:07,592 | INFO     | chi2: 2.357290943161989
[2026-01-10 17:43:49] 2026-01-10 22:43:07,593 | INFO     | current chi2=2.357290943161989 (change=23.025934822123325 %)
[2026-01-10 17:43:49] 2026-01-10 22:43:07,593 | INFO     | right removable region: 1270
[2026-01-10 17:43:49] 2026-01-10 22:43:07,595 | INFO     | sum of square deviations: 636667764038.3877
[2026-01-10 17:43:49] 2026-01-10 22:43:07,643 | INFO     | sum of deviations: 528583092355.00085
[2026-01-10 17:43:49] 2026-01-10 22:43:07,644 | INFO     | mean x: 1768046185.1935484
[2026-01-10 17:43:49] 2026-01-10 22:43:07,644 | INFO     | mean y: 2709082.2439024393
[2026-01-10 17:43:49] 2026-01-10 22:43:07,644 | INFO     | intersect: -1465182607.5569956
[2026-01-10 17:43:49] 2026-01-10 22:43:07,646 | INFO     | chi2: 0.8206667225328731
[2026-01-10 17:43:49] 2026-01-10 22:43:07,646 | INFO     | current chi2=0.8206667225328731 (change=73.20226679154602 %)
[2026-01-10 17:43:49] 2026-01-10 22:43:07,648 | INFO     | sum of square deviations: 629183157821.5261
[2026-01-10 17:43:49] 2026-01-10 22:43:07,696 | INFO     | sum of deviations: 474982640915.6914
[2026-01-10 17:43:49] 2026-01-10 22:43:07,697 | INFO     | mean x: 1768046337.6966825
[2026-01-10 17:43:49] 2026-01-10 22:43:07,697 | INFO     | mean y: 2710173.0695102685
[2026-01-10 17:43:49] 2026-01-10 22:43:07,697 | INFO     | intersect: -1332022501.0347471
[2026-01-10 17:43:49] 2026-01-10 22:43:07,699 | INFO     | chi2: 0.7627234430322725
[2026-01-10 17:43:49] 2026-01-10 22:43:07,699 | INFO     | current chi2=0.7627234430322725 (change=7.0605128622453215 %)
[2026-01-10 17:43:49] 2026-01-10 22:43:07,699 | INFO     | left removable region: 20
[2026-01-10 17:43:49] 2026-01-10 22:43:07,701 | INFO     | sum of square deviations: 605628055628.8365
[2026-01-10 17:43:49] 2026-01-10 22:43:07,748 | INFO     | sum of deviations: 532147319910.0752
[2026-01-10 17:43:49] 2026-01-10 22:43:07,749 | INFO     | mean x: 1768046459.7072
[2026-01-10 17:43:49] 2026-01-10 22:43:07,749 | INFO     | mean y: 2712263.3472
[2026-01-10 17:43:49] 2026-01-10 22:43:07,749 | INFO     | intersect: -1550817458.8397403
[2026-01-10 17:43:49] 2026-01-10 22:43:07,751 | INFO     | chi2: 0.01886104285705174
[2026-01-10 17:43:49] 2026-01-10 22:43:07,751 | INFO     | current memory leak: 0.88 B/s (using 1250 data points, chi2=0.02)
[2026-01-10 17:43:49] 2026-01-10 22:43:07,752 | INFO     | could have reported an average CPU frequency of 2900 MHz (45 samples)
[2026-01-10 17:43:49] 2026-01-10 22:43:07,753 | INFO     | ..............................
[2026-01-10 17:43:49] 2026-01-10 22:43:07,753 | INFO     | . Timing measurements:
[2026-01-10 17:43:49] 2026-01-10 22:43:07,753 | INFO     | . get job = 0 s
[2026-01-10 17:43:49] 2026-01-10 22:43:07,753 | INFO     | . initial setup = 5 s
[2026-01-10 17:43:49] 2026-01-10 22:43:07,753 | INFO     | . payload setup = 29 s
[2026-01-10 17:43:49] 2026-01-10 22:43:07,754 | INFO     | . stage-in = 0 s
[2026-01-10 17:43:49] 2026-01-10 22:43:07,754 | INFO     | . payload execution = 77832 s
[2026-01-10 17:43:49] 2026-01-10 22:43:07,754 | INFO     | . stage-out = 5 s
[2026-01-10 17:43:49] 2026-01-10 22:43:07,754 | INFO     | . log creation = 0 s
[2026-01-10 17:43:49] 2026-01-10 22:43:07,754 | INFO     | ..............................
[2026-01-10 17:43:49] 2026-01-10 22:43:08,281 | INFO     | 
[2026-01-10 17:43:49] 2026-01-10 22:43:08,281 | INFO     | job summary report
[2026-01-10 17:43:49] 2026-01-10 22:43:08,281 | INFO     | --------------------------------------------------
[2026-01-10 17:43:49] 2026-01-10 22:43:08,281 | INFO     | PanDA job id: 6963190093
[2026-01-10 17:43:49] 2026-01-10 22:43:08,281 | INFO     | task id: 47898826
[2026-01-10 17:43:49] 2026-01-10 22:43:08,282 | INFO     | errors: (none)
[2026-01-10 17:43:49] 2026-01-10 22:43:08,282 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 17:43:49] 2026-01-10 22:43:08,282 | INFO     | pilot state: finished 
[2026-01-10 17:43:49] 2026-01-10 22:43:08,282 | INFO     | transexitcode: 0
[2026-01-10 17:43:49] 2026-01-10 22:43:08,282 | INFO     | exeerrorcode: 0
[2026-01-10 17:43:49] 2026-01-10 22:43:08,282 | INFO     | exeerrordiag: 
[2026-01-10 17:43:49] 2026-01-10 22:43:08,283 | INFO     | exitcode: 0
[2026-01-10 17:43:49] 2026-01-10 22:43:08,283 | INFO     | exitmsg: OK
[2026-01-10 17:43:49] 2026-01-10 22:43:08,283 | INFO     | cpuconsumptiontime: 109921 s
[2026-01-10 17:43:49] 2026-01-10 22:43:08,283 | INFO     | nevents: 400
[2026-01-10 17:43:49] 2026-01-10 22:43:08,283 | INFO     | neventsw: 0
[2026-01-10 17:43:49] 2026-01-10 22:43:08,283 | INFO     | pid: 3226591
[2026-01-10 17:43:49] 2026-01-10 22:43:08,283 | INFO     | pgrp: 3226591
[2026-01-10 17:43:49] 2026-01-10 22:43:08,284 | INFO     | corecount: 12
[2026-01-10 17:43:49] 2026-01-10 22:43:08,284 | INFO     | event service: False
[2026-01-10 17:43:49] 2026-01-10 22:43:08,284 | INFO     | sizes: {0: 2283800, 1: 2283828, 2: 2283828, 3: 2283999, 14: 2284027, 23: 2284317, 25: 2284473, 77865: 2342222, 77866: 2342221, 77872: 2351331, 77900: 2351469}
[2026-01-10 17:43:49] 2026-01-10 22:43:08,284 | INFO     | --------------------------------------------------
[2026-01-10 17:43:49] 2026-01-10 22:43:08,284 | INFO     | 
[2026-01-10 17:43:49] 2026-01-10 22:43:08,334 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 17:43:49] 2026-01-10 22:43:08,635 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,635 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,636 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,636 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,636 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,636 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,636 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,636 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,637 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,637 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,637 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,637 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,637 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,641 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,641 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,642 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 17:43:49] 2026-01-10 22:43:08,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,642 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 17:43:49] 2026-01-10 22:43:08,643 | INFO     | job 6963190093 has completed (purged errors)
[2026-01-10 17:43:49] 2026-01-10 22:43:08,643 | INFO     | overall cleanup function is called
[2026-01-10 17:43:49] 2026-01-10 22:43:09,653 | INFO     | --- collectZombieJob: --- 10, [3226591]
[2026-01-10 17:43:49] 2026-01-10 22:43:09,654 | INFO     | zombie collector waiting for pid 3226591
[2026-01-10 17:43:49] 2026-01-10 22:43:09,654 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 17:43:49] 2026-01-10 22:43:09,654 | INFO     | collected zombie processes
[2026-01-10 17:43:49] 2026-01-10 22:43:09,654 | INFO     | will attempt to kill all subprocesses of pid=3226591
[2026-01-10 17:43:49] 2026-01-10 22:43:10,563 | INFO     | process IDs to be killed: [3226591] (in reverse order)
[2026-01-10 17:43:49] 2026-01-10 22:43:10,918 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 17:43:49] 2026-01-10 22:43:10,919 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 17:43:49] 2026-01-10 22:43:10,943 | INFO     | did not find any defunct processes belonging to 3226591
[2026-01-10 17:43:49] 2026-01-10 22:43:10,967 | INFO     | did not find any defunct processes belonging to 3226591
[2026-01-10 17:43:49] 2026-01-10 22:43:10,967 | INFO     | ready for new job
[2026-01-10 17:43:49] 2026-01-10 22:43:10,968 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 17:43:49] 2026-01-10 22:43:10,990 | INFO     | ***************************************
[2026-01-10 17:43:49] 2026-01-10 22:43:10,990 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 17:43:49] 2026-01-10 22:43:10,990 | INFO     | ***************************************
[2026-01-10 17:43:49] 2026-01-10 22:43:10,991 | INFO     | 
[2026-01-10 17:43:49] 2026-01-10 22:43:10,993 | INFO     | architecture information:
[2026-01-10 17:43:49] 2026-01-10 22:43:10,997 | INFO     | executing command: cat /etc/os-release
[2026-01-10 17:43:49] 2026-01-10 22:43:11,039 | INFO     | cat /etc/os-release:
[2026-01-10 17:43:49] NAME="CentOS Linux"
[2026-01-10 17:43:49] VERSION="7 (Core)"
[2026-01-10 17:43:49] ID="centos"
[2026-01-10 17:43:49] ID_LIKE="rhel fedora"
[2026-01-10 17:43:49] VERSION_ID="7"
[2026-01-10 17:43:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 17:43:49] ANSI_COLOR="0;31"
[2026-01-10 17:43:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 17:43:49] HOME_URL="https://www.centos.org/"
[2026-01-10 17:43:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 17:43:49] 
[2026-01-10 17:43:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 17:43:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 17:43:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 17:43:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 17:43:49] 
[2026-01-10 17:43:49] 2026-01-10 22:43:11,039 | INFO     | ***************************************
[2026-01-10 17:43:49] 2026-01-10 22:43:11,543 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 17:43:49] 2026-01-10 22:43:11,600 | INFO     | sufficient remaining disk space (53074722816 B)
[2026-01-10 17:43:49] 2026-01-10 22:43:11,601 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 17:43:49] 2026-01-10 22:43:11,601 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 17:43:49] 2026-01-10 22:43:11,601 | INFO     | update_server=False
[2026-01-10 17:43:49] 2026-01-10 22:43:11,601 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 17:43:49] 2026-01-10 22:43:11,601 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:43:49] 2026-01-10 22:43:11,823 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 17:43:49] 2026-01-10 22:43:11,823 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 17:43:49] 2026-01-10 22:43:11,824 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:43:49] 2026-01-10 22:43:11,824 | INFO     | will abort loop
[2026-01-10 17:43:49] 2026-01-10 22:43:11,994 | INFO     | all data control threads have been joined
[2026-01-10 17:43:49] 2026-01-10 22:43:12,607 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:12,730 | INFO     | all payload control threads have been joined
[2026-01-10 17:43:49] 2026-01-10 22:43:12,809 | INFO     | all job control threads have been joined
[2026-01-10 17:43:49] 2026-01-10 22:43:12,829 | INFO     | [job] job monitor thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:12,855 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:12,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:43:49] 2026-01-10 22:43:12,908 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:13,000 | INFO     | [data] control thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:13,078 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:13,301 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:13,588 | INFO     | [job] validate thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:13,609 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:13,736 | INFO     | [payload] control thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:13,753 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 17:43:49] 2026-01-10 22:43:13,788 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:13,793 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:13,816 | INFO     | [job] control thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:13,889 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:13,910 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:17,762 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:43:49] 2026-01-10 22:43:40,895 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:43:49] 2026-01-10 22:43:40,920 | INFO     | PID=3206034 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 17:43:49] 2026-01-10 22:43:40,920 | INFO     | .. there are 27 such processes running
[2026-01-10 17:43:49] 2026-01-10 22:43:40,922 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:43:49] 2026-01-10 22:43:40,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:43:49] 2026-01-10 22:43:40,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:43:49] 2026-01-10 22:43:42,698 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140260070561600)>', '<ExcThread(monitor, started 140259127977728)>']
[2026-01-10 17:43:49] 2026-01-10 22:43:42,933 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:43:49] 2026-01-10 22:43:42,934 | INFO     | [monitor] control thread has ended
[2026-01-10 17:43:49] 2026-01-10 22:43:47,724 | INFO     | all workflow threads have been joined
[2026-01-10 17:43:49] 2026-01-10 22:43:47,724 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:43:49] 2026-01-10 22:43:47,724 | INFO     | traces error code: 0
[2026-01-10 17:43:49] 2026-01-10 22:43:47,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:43:49] 2026-01-10 22:43:48,261 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:43:49] 2026-01-10 22:43:48,312 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:43:49] 2026-01-10 22:43:48,352 [wrapper] pilotpid: 3206034
[2026-01-10 17:43:49] 2026-01-10 22:43:48,396 [wrapper] Pilot exit status: 0
[2026-01-10 17:43:49] 2026-01-10 22:43:48,534 [wrapper] pandaids: 6963190093
[2026-01-10 17:43:49] 2026-01-10 22:43:48,754 [wrapper] cleanup supervisor_pilot 3877030 3206035
[2026-01-10 17:43:49] 2026-01-10 22:43:48,783 [wrapper] Test setup, not cleaning
[2026-01-10 17:43:49] 2026-01-10 22:43:48,924 [wrapper] apfmon messages muted
[2026-01-10 17:43:49] 2026-01-10 22:43:48,927 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:43:49] 2026-01-10 22:43:48,930 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:43:49]  *** Error codes and diagnostics ***
[2026-01-10 17:43:49]     "exeErrorCode": 0,
[2026-01-10 17:43:49]     "exeErrorDiag": "",
[2026-01-10 17:43:49]     "pilotErrorCode": 0,
[2026-01-10 17:43:49]     "pilotErrorDiag": "",
[2026-01-10 17:43:49]  *** Listing of results directory ***
[2026-01-10 17:43:49] total 452420
[2026-01-10 17:43:49] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-10 17:43:49] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-10 17:43:49] -rwx------. 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-10 17:43:49] -rw-r--r--. 1 boincer umatlas       100 Jan  9 20:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:43:49] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 20:03 run_atlas
[2026-01-10 17:43:49] -rw-r--r--. 1 boincer umatlas       105 Jan  9 20:03 job.xml
[2026-01-10 17:43:49] -rw-r--r--. 2 boincer umatlas 224386796 Jan  9 20:03 EVNT.47898824._001486.pool.root.1
[2026-01-10 17:43:49] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:03 start_atlas.sh
[2026-01-10 17:43:49] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 20:03 shared
[2026-01-10 17:43:49] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 20:03 input.tar.gz
[2026-01-10 17:43:49] -rw-r--r--. 1 boincer umatlas         0 Jan  9 20:03 boinc_lockfile
[2026-01-10 17:43:49] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 20:03 pandaJob.out
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas        57 Jan  9 20:03 setup.sh.local
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas    989374 Jan  9 20:03 agis_schedconf.cvmfs.json
[2026-01-10 17:43:49] drwx------. 5 boincer umatlas      4096 Jan  9 20:04 pilot3
[2026-01-10 17:43:49] -rw-r--r--. 1 boincer umatlas      6525 Jan 10 17:37 init_data.xml
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas 216069991 Jan 10 17:41 HITS.47898826._038678.pool.root.1
[2026-01-10 17:43:49] -rw-r--r--. 1 boincer umatlas       532 Jan 10 17:41 boinc_task_state.xml
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas      1041 Jan 10 17:42 memory_monitor_summary.json
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas   1516240 Jan 10 17:42 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas   1211022 Jan 10 17:42 log.47898826._038678.job.log.tgz.1
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas      7824 Jan 10 17:43 heartbeat.json
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas        95 Jan 10 17:43 pilot_heartbeat.json
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas      5010 Jan 10 17:43 pilotlog.txt
[2026-01-10 17:43:49] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 17:43 boinc_mmap_file
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas   8244462 Jan 10 17:43 log.47898826._038678.job.log.1
[2026-01-10 17:43:49] -rw-r--r--. 1 boincer umatlas        29 Jan 10 17:43 wrapper_checkpoint.txt
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas       357 Jan 10 17:43 output.list
[2026-01-10 17:43:49] -rw-r--r--. 1 boincer umatlas       620 Jan 10 17:43 runtime_log
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas   9472000 Jan 10 17:43 result.tar.gz
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas       658 Jan 10 17:43 t6zMDmRCJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0vgKDmsYFaCo.diag
[2026-01-10 17:43:49] -rw-r--r--. 1 boincer umatlas      9340 Jan 10 17:43 runtime_log.err
[2026-01-10 17:43:49] -rw-r--r--. 1 boincer umatlas     21420 Jan 10 17:43 stderr.txt
[2026-01-10 17:43:49] HITS file was successfully produced:
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas 216069991 Jan 10 17:41 shared/HITS.pool.root.1
[2026-01-10 17:43:49]  *** Contents of shared directory: ***
[2026-01-10 17:43:49] total 439988
[2026-01-10 17:43:49] -rw-r--r--. 2 boincer umatlas 224386796 Jan  9 20:03 ATLAS.root_0
[2026-01-10 17:43:49] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:03 start_atlas.sh
[2026-01-10 17:43:49] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 20:03 input.tar.gz
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas 216069991 Jan 10 17:41 HITS.pool.root.1
[2026-01-10 17:43:49] -rw-------. 1 boincer umatlas   9472000 Jan 10 17:43 result.tar.gz
17:44:10 (3197303): run_atlas exited; CPU time 113991.326202
17:44:10 (3197303): called boinc_finish(0)

</stderr_txt>
]]>

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