Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:58:53 (27250): wrapper (7.7.26015): starting
01:58:53 (27250): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 01:58:53] Arguments: --nthreads 8
[2026-01-10 01:58:53] Threads: 8
[2026-01-10 01:58:53] Checking for CVMFS
[2026-01-10 01:58:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 01:58:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 01:58:53] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 01:58:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 01:58:53] 2.11.0.0 7985 129771 111428 154962 1 1 3481857 4096000 0 130560 3 7816975 99.254 11046046 623 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-10 01:58:53] CVMFS is ok
[2026-01-10 01:58:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 01:58:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 01:58:53] Further information can be found at the LHC@home message board.
[2026-01-10 01:58:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 01:58:53] Checking for apptainer binary...
[2026-01-10 01:58:53] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-10 01:58:53] apptainer is not installed, using version from CVMFS
[2026-01-10 01:58:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 01:58:54] WARNING: Environment variable TMPDIR already has value [/tmp/job_11010120/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node091
[2026-01-10 01:58:54] apptainer works
[2026-01-10 01:58:54] Set ATHENA_PROC_NUMBER=8
[2026-01-10 01:58:54] Set ATHENA_CORE_NUMBER=8
[2026-01-10 01:58:54] Starting ATLAS job with PandaID=6963162505
[2026-01-10 01:58:54] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11010120/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 03:05:19]  *** The last 200 lines of the pilot log: ***
[2026-01-10 03:05:19]  status=None
[2026-01-10 03:05:19]  status_code=0
[2026-01-10 03:05:19]  storage_token=
[2026-01-10 03:05:19]  surl=/tmp/job_11010120/atlas/pilot/slots/0/PanDA_Pilot-6963162505/log.47898826._034126.job.log.tgz.1
[2026-01-10 03:05:19]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/0d/log.47898826._034126.job.log.tgz.1
[2026-01-10 03:05:19]  workdir=None
[2026-01-10 03:05:19] ]
[2026-01-10 03:05:19] 2026-01-10 02:04:41,900 | INFO     | transferring file log.47898826._034126.job.log.tgz.1 from /tmp/job_11010120/atlas/pilot/slots/0/PanDA_Pilot-6963162505/log.47898826._034126.job.log.tgz.1 to /tmp/j
[2026-01-10 03:05:19] 2026-01-10 02:04:41,900 | INFO     | executing command: /usr/bin/env mv /tmp/job_11010120/atlas/pilot/slots/0/PanDA_Pilot-6963162505/log.47898826._034126.job.log.tgz.1 /tmp/job_11010120/atlas/pilot/sl
[2026-01-10 03:05:19] 2026-01-10 02:04:41,908 | INFO     | adding to output.list: log.47898826._034126.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/dc/0d/log.47898826._034126.job.log.tg
[2026-01-10 03:05:19] 2026-01-10 02:04:41,909 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 03:05:19] 2026-01-10 02:04:41,909 | INFO     | summary of transferred files:
[2026-01-10 03:05:19] 2026-01-10 02:04:41,909 | INFO     |  -- lfn=log.47898826._034126.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 03:05:19] 2026-01-10 02:04:41,909 | INFO     | stage-out finished correctly
[2026-01-10 03:05:19] 2026-01-10 02:04:41,960 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 03:05:19] 2026-01-10 02:04:42,106 | INFO     | time since job start (3943s) is within the limit (349056.0s)
[2026-01-10 03:05:19] 2026-01-10 02:04:42,143 | WARNING  | process 15371 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 03:05:19] 2026-01-10 02:04:42,143 | INFO     | using path: /tmp/job_11010120/atlas/pilot/slots/0/PanDA_Pilot-6963162505/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 03:05:19] 2026-01-10 02:04:42,249 | INFO     | number of running child processes to parent process 15371: 1
[2026-01-10 03:05:19] 2026-01-10 02:04:42,249 | INFO     | maximum number of monitored processes: 6
[2026-01-10 03:05:19] 2026-01-10 02:04:43,031 | INFO     | job 6963162505 has state=finished
[2026-01-10 03:05:19] 2026-01-10 02:04:43,031 | INFO     | preparing for final server update for job 6963162505 in state='finished'
[2026-01-10 03:05:19] 2026-01-10 02:04:43,598 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-10 03:05:19] 2026-01-10 02:04:43,598 | INFO     | this job has now completed (state=finished)
[2026-01-10 03:05:19] 2026-01-10 02:04:43,598 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 03:05:19] 2026-01-10 02:04:43,598 | INFO     | log transfer has been attempted: DONE
[2026-01-10 03:05:19] 2026-01-10 02:04:43,598 | INFO     | job 6963162505 has finished - writing final server update
[2026-01-10 03:05:19] 2026-01-10 02:04:43,598 | INFO     | total number of processed events: 400 (read)
[2026-01-10 03:05:19] 2026-01-10 02:04:43,598 | INFO     | executing command: lscpu
[2026-01-10 03:05:19] 2026-01-10 02:04:43,627 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 03:05:19] 2026-01-10 02:04:44,111 | INFO     | time since job start (3945s) is within the limit (349056.0s)
[2026-01-10 03:05:19] 2026-01-10 02:04:44,752 | INFO     | monitor loop #291: job 0:6963162505 is in state 'finished'
[2026-01-10 03:05:19] 2026-01-10 02:04:44,752 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 03:05:19] 2026-01-10 02:04:46,117 | INFO     | time since job start (3947s) is within the limit (349056.0s)
[2026-01-10 03:05:19] 2026-01-10 02:04:46,608 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 03:05:19] 2026-01-10 02:04:46,625 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2723.74096875
[2026-01-10 03:05:19] 2026-01-10 02:04:46,630 | INFO     | using path: /tmp/job_11010120/atlas/pilot/slots/0/PanDA_Pilot-6963162505/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 03:05:19] 2026-01-10 02:04:46,630 | INFO     | extracted standard info from prmon json
[2026-01-10 03:05:19] 2026-01-10 02:04:46,630 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 03:05:19] 2026-01-10 02:04:46,630 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 03:05:19] 2026-01-10 02:04:46,631 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 03:05:19] 2026-01-10 02:04:46,631 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 03:05:19] 2026-01-10 02:04:46,631 | INFO     | fitting pss+swap vs Time
[2026-01-10 03:05:19] 2026-01-10 02:04:46,631 | INFO     | sum of square deviations: 60482994.5
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | sum of deviations: -71991346.00000003
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | mean x: 1768008800.5
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | mean y: 2526672.724137931
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | intersect: 2106941878.0235472
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | chi2: 0.003169406684681244
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | current memory leak: -1.19 B/s (using 58 data points, chi2=0.00)
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | could have reported an average CPU frequency of 2709 MHz (6 samples)
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | ..............................
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | . Timing measurements:
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | . get job = 0 s
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | . initial setup = 1 s
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | . payload setup = 2 s
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | . stage-in = 0 s
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | . payload execution = 3922 s
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | . stage-out = 0 s
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | . log creation = 0 s
[2026-01-10 03:05:19] 2026-01-10 02:04:46,632 | INFO     | ..............................
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | 
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | job summary report
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | --------------------------------------------------
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | PanDA job id: 6963162505
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | task id: 47898826
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | errors: (none)
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | pilot state: finished 
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | transexitcode: 0
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | exeerrorcode: 0
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | exeerrordiag: 
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | exitcode: 0
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | exitmsg: OK
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | cpuconsumptiontime: 28111 s
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | nevents: 400
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | neventsw: 0
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | pid: 15371
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | pgrp: 15371
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | corecount: 8
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | event service: False
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | sizes: {0: 2283813, 1: 2284123, 3: 2284385, 11: 2284413, 3928: 2310389, 3929: 2310388, 3930: 2319656, 3934: 2319794}
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | --------------------------------------------------
[2026-01-10 03:05:19] 2026-01-10 02:04:46,682 | INFO     | 
[2026-01-10 03:05:19] 2026-01-10 02:04:46,683 | INFO     | executing command: ls -lF /tmp/job_11010120/atlas/pilot/slots/0
[2026-01-10 03:05:19] 2026-01-10 02:04:46,692 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,692 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,692 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | job 6963162505 has completed (purged errors)
[2026-01-10 03:05:19] 2026-01-10 02:04:46,693 | INFO     | overall cleanup function is called
[2026-01-10 03:05:19] 2026-01-10 02:04:47,260 | INFO     | PID=31992 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 03:05:19] 2026-01-10 02:04:47,260 | INFO     | .. there are 7 such processes running
[2026-01-10 03:05:19] 2026-01-10 02:04:47,699 | INFO     | --- collectZombieJob: --- 10, [15371]
[2026-01-10 03:05:19] 2026-01-10 02:04:47,699 | INFO     | zombie collector waiting for pid 15371
[2026-01-10 03:05:19] 2026-01-10 02:04:47,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 03:05:19] 2026-01-10 02:04:47,699 | INFO     | collected zombie processes
[2026-01-10 03:05:19] 2026-01-10 02:04:47,700 | INFO     | will attempt to kill all subprocesses of pid=15371
[2026-01-10 03:05:19] 2026-01-10 02:04:47,809 | INFO     | process IDs to be killed: [15371] (in reverse order)
[2026-01-10 03:05:19] 2026-01-10 02:04:47,850 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 03:05:19] 2026-01-10 02:04:47,850 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 03:05:19] 2026-01-10 02:04:47,854 | INFO     | did not find any defunct processes belonging to 15371
[2026-01-10 03:05:19] 2026-01-10 02:04:47,857 | INFO     | did not find any defunct processes belonging to 15371
[2026-01-10 03:05:19] 2026-01-10 02:04:47,857 | INFO     | ready for new job
[2026-01-10 03:05:19] 2026-01-10 02:04:47,857 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 03:05:19] 2026-01-10 02:04:47,858 | INFO     | ***************************************
[2026-01-10 03:05:19] 2026-01-10 02:04:47,858 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 03:05:19] 2026-01-10 02:04:47,858 | INFO     | ***************************************
[2026-01-10 03:05:19] 2026-01-10 02:04:47,858 | INFO     | 
[2026-01-10 03:05:19] 2026-01-10 02:04:47,871 | INFO     | architecture information:
[2026-01-10 03:05:19] 2026-01-10 02:04:47,872 | INFO     | executing command: cat /etc/os-release
[2026-01-10 03:05:19] 2026-01-10 02:04:47,878 | INFO     | cat /etc/os-release:
[2026-01-10 03:05:19] NAME="CentOS Linux"
[2026-01-10 03:05:19] VERSION="7 (Core)"
[2026-01-10 03:05:19] ID="centos"
[2026-01-10 03:05:19] ID_LIKE="rhel fedora"
[2026-01-10 03:05:19] VERSION_ID="7"
[2026-01-10 03:05:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 03:05:19] ANSI_COLOR="0;31"
[2026-01-10 03:05:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 03:05:19] HOME_URL="https://www.centos.org/"
[2026-01-10 03:05:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 03:05:19] 
[2026-01-10 03:05:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 03:05:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 03:05:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 03:05:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 03:05:19] 
[2026-01-10 03:05:19] 2026-01-10 02:04:47,878 | INFO     | ***************************************
[2026-01-10 03:05:19] 2026-01-10 02:04:48,381 | INFO     | executing command: df -mP /tmp/job_11010120/atlas/pilot/slots/0
[2026-01-10 03:05:19] 2026-01-10 02:04:48,387 | INFO     | sufficient remaining disk space (222939840512 B)
[2026-01-10 03:05:19] 2026-01-10 02:04:48,387 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 03:05:19] 2026-01-10 02:04:48,387 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 03:05:19] 2026-01-10 02:04:48,387 | INFO     | update_server=False
[2026-01-10 03:05:19] 2026-01-10 02:04:48,387 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 03:05:19] 2026-01-10 02:04:48,387 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 03:05:19] 2026-01-10 02:04:48,387 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:05:19] 2026-01-10 02:04:48,387 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 03:05:19] 2026-01-10 02:04:48,387 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:05:19] 2026-01-10 02:04:48,388 | INFO     | aborting loop
[2026-01-10 03:05:19] 2026-01-10 02:04:48,876 | INFO     | all job control threads have been joined
[2026-01-10 03:05:19] 2026-01-10 02:04:49,085 | INFO     | all data control threads have been joined
[2026-01-10 03:05:19] 2026-01-10 02:04:49,378 | INFO     | all payload control threads have been joined
[2026-01-10 03:05:19] 2026-01-10 02:04:49,392 | INFO     | [job] retrieve thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:04:49,393 | INFO     | [job] queue monitor thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:04:49,393 | INFO     | [job] job monitor thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:04:49,424 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:04:49,445 | INFO     | [payload] failed_post thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:04:49,541 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:04:49,858 | INFO     | [payload] validate_post thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:04:49,881 | INFO     | [job] control thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:04:49,887 | INFO     | [data] copytool_in thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:04:50,090 | INFO     | [data] control thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:04:50,383 | INFO     | [payload] control thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:04:50,393 | INFO     | [data] copytool_out thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:04:50,667 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:04:50,731 | INFO     | [job] validate thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:04:52,393 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:04:58,689 | INFO     | job.realtimelogging is not enabled
[2026-01-10 03:05:19] 2026-01-10 02:04:59,694 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 03:05:19] 2026-01-10 02:05:05,611 | INFO     | [monitor] cgroup control has ended
[2026-01-10 03:05:19] 2026-01-10 02:05:07,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456062920448)>']
[2026-01-10 03:05:19] 2026-01-10 02:05:12,617 | INFO     | all workflow threads have been joined
[2026-01-10 03:05:19] 2026-01-10 02:05:12,618 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 03:05:19] 2026-01-10 02:05:12,618 | INFO     | traces error code: 0
[2026-01-10 03:05:19] 2026-01-10 02:05:12,618 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 03:05:19] 2026-01-10 02:05:19,452 | INFO     | PID=31992 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 03:05:19] 2026-01-10 02:05:19,453 | INFO     | .. there are 7 such processes running
[2026-01-10 03:05:19] 2026-01-10 02:05:19,453 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 03:05:19] 2026-01-10 02:05:19,453 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 03:05:19] 2026-01-10 02:05:19,453 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 03:05:19] 2026-01-10 02:05:19,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 03:05:19] 2026-01-10 02:05:19,453 | CRITICAL | thread 'MainThread' is not alive
[2026-01-10 03:05:19] 2026-01-10 02:05:19,453 | INFO     | [monitor] control thread has ended
[2026-01-10 03:05:19] 2026-01-10 02:05:19,508 [wrapper] ==== pilot stdout END ====
[2026-01-10 03:05:19] 2026-01-10 02:05:19,509 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 03:05:19] 2026-01-10 02:05:19,510 [wrapper] pilotpid: 31992
[2026-01-10 03:05:19] 2026-01-10 02:05:19,511 [wrapper] Pilot exit status: 0
[2026-01-10 03:05:19] 2026-01-10 02:05:19,516 [wrapper] pandaids: 6963162505
[2026-01-10 03:05:19] 2026-01-10 02:05:19,540 [wrapper] cleanup supervisor_pilot 21460 31993
[2026-01-10 03:05:19] 2026-01-10 02:05:19,541 [wrapper] Test setup, not cleaning
[2026-01-10 03:05:19] 2026-01-10 02:05:19,542 [wrapper] apfmon messages muted
[2026-01-10 03:05:19] 2026-01-10 02:05:19,543 [wrapper] ==== wrapper stdout END ====
[2026-01-10 03:05:19] 2026-01-10 02:05:19,544 [wrapper] ==== wrapper stderr END ====
[2026-01-10 03:05:19]  *** Error codes and diagnostics ***
[2026-01-10 03:05:19]     "exeErrorCode": 0,
[2026-01-10 03:05:19]     "exeErrorDiag": "",
[2026-01-10 03:05:19]     "pilotErrorCode": 0,
[2026-01-10 03:05:19]     "pilotErrorDiag": "",
[2026-01-10 03:05:19]  *** Listing of results directory ***
[2026-01-10 03:05:19] total 434744
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-10 03:05:19] -rwx------ 1 mf493845 unix-user     36322 Jan  9 01:58 runpilot2-wrapper.sh
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user      5112 Jan  9 02:01 queuedata.json
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user       100 Jan 10 01:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 03:05:19] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 10 01:02 run_atlas
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user       105 Jan 10 01:02 job.xml
[2026-01-10 03:05:19] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 01:58 start_atlas.sh
[2026-01-10 03:05:19] drwxrwx--x 2 mf493845 unix-user       100 Jan 10 01:58 shared
[2026-01-10 03:05:19] -rw-r--r-- 2 mf493845 unix-user    592401 Jan 10 01:58 input.tar.gz
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user      6389 Jan 10 01:58 init_data.xml
[2026-01-10 03:05:19] -rw-r--r-- 2 mf493845 unix-user 222884206 Jan 10 01:58 EVNT.47898824._001301.pool.root.1
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user         0 Jan 10 01:58 boinc_setup_complete
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user      8192 Jan 10 01:58 boinc_mmap_file
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user         0 Jan 10 01:58 boinc_lockfile
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user      2519 Jan 10 01:58 pandaJob.out
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user    989374 Jan 10 01:58 agis_schedconf.cvmfs.json
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user   1516240 Jan 10 01:58 agis_ddmendpoints.agis.ALL.json
[2026-01-10 03:05:19] drwx------ 5 mf493845 unix-user       440 Jan 10 01:58 pilot3
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user 216584303 Jan 10 03:04 HITS.47898826._034126.pool.root.1
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user      1015 Jan 10 03:04 memory_monitor_summary.json
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user    302497 Jan 10 03:04 log.47898826._034126.job.log.tgz.1
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user      7765 Jan 10 03:04 heartbeat.json
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user       890 Jan 10 03:05 pilotlog.txt
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user        95 Jan 10 03:05 pilot_heartbeat.json
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user    606665 Jan 10 03:05 log.47898826._034126.job.log.1
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user       357 Jan 10 03:05 output.list
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user       620 Jan 10 03:05 runtime_log
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user    931840 Jan 10 03:05 result.tar.gz
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user      9220 Jan 10 03:05 runtime_log.err
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user       645 Jan 10 03:05 KK5LDmy0Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQigKDmSJKoxn.diag
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user     22591 Jan 10 03:05 stderr.txt
[2026-01-10 03:05:19] HITS file was successfully produced:
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user 216584303 Jan 10 03:04 shared/HITS.pool.root.1
[2026-01-10 03:05:19]  *** Contents of shared directory: ***
[2026-01-10 03:05:19] total 430684
[2026-01-10 03:05:19] -rw-r--r-- 2 mf493845 unix-user     15847 Jan 10 01:58 start_atlas.sh
[2026-01-10 03:05:19] -rw-r--r-- 2 mf493845 unix-user    592401 Jan 10 01:58 input.tar.gz
[2026-01-10 03:05:19] -rw-r--r-- 2 mf493845 unix-user 222884206 Jan 10 01:58 ATLAS.root_0
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user 216584303 Jan 10 03:04 HITS.pool.root.1
[2026-01-10 03:05:19] -rw------- 1 mf493845 unix-user    931840 Jan 10 03:05 result.tar.gz
03:05:21 (27250): run_atlas exited; CPU time 28166.817259
03:05:21 (27250): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN