Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:52:50 (487157): wrapper (7.7.26015): starting
19:52:50 (487157): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 19:52:50] Arguments: --nthreads 11
[2026-01-09 19:52:50] Threads: 11
[2026-01-09 19:52:50] Checking for CVMFS
[2026-01-09 19:52:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:52:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:52:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:52:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:52:52] 2.13.3.0 10276 22128 110256 154962 2 411 21560027 40960001 26357 16776704 0 69534382 99.834 27621577 50521 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 19:52:52] CVMFS is ok
[2026-01-09 19:52:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:52:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:52:52] Further information can be found at the LHC@home message board.
[2026-01-09 19:52:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:52:52] Checking for apptainer binary...
[2026-01-09 19:52:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:52:52] Running /usr/bin/apptainer --version
[2026-01-09 19:52:52] apptainer version 1.4.5-2.el9
[2026-01-09 19:52:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:52:53] c-208-36.aglt2.org
[2026-01-09 19:52:53] apptainer works
[2026-01-09 19:52:53] Set ATHENA_PROC_NUMBER=11
[2026-01-09 19:52:53] Set ATHENA_CORE_NUMBER=11
[2026-01-09 19:52:53] Starting ATLAS job with PandaID=6963166939
[2026-01-09 19:52:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:36:46]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:36:46] 2026-01-10 02:35:43,369 | INFO     | total number of processed events: 400 (read)
[2026-01-09 21:36:46] 2026-01-10 02:35:43,395 | INFO     | executing command: lscpu
[2026-01-09 21:36:46] 2026-01-10 02:35:43,628 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 21:36:46] 2026-01-10 02:35:44,487 | INFO     | time since job start (6094s) is within the limit (349056.0s)
[2026-01-09 21:36:46] 2026-01-10 02:35:45,325 | INFO     | monitor loop #421: job 0:6963166939 is in state 'finished'
[2026-01-09 21:36:46] 2026-01-10 02:35:45,326 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:36:46] 2026-01-10 02:35:46,496 | INFO     | time since job start (6096s) is within the limit (349056.0s)
[2026-01-09 21:36:46] 2026-01-10 02:35:47,830 | INFO     | monitor loop #422: job 0:6963166939 is in state 'finished'
[2026-01-09 21:36:46] 2026-01-10 02:35:47,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:36:46] 2026-01-10 02:35:48,505 | INFO     | time since job start (6098s) is within the limit (349056.0s)
[2026-01-09 21:36:46] 2026-01-10 02:35:50,336 | INFO     | monitor loop #423: job 0:6963166939 is in state 'finished'
[2026-01-09 21:36:46] 2026-01-10 02:35:50,337 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:36:46] 2026-01-10 02:35:50,513 | INFO     | time since job start (6100s) is within the limit (349056.0s)
[2026-01-09 21:36:46] 2026-01-10 02:35:52,520 | INFO     | time since job start (6102s) is within the limit (349056.0s)
[2026-01-09 21:36:46] 2026-01-10 02:35:52,844 | INFO     | monitor loop #424: job 0:6963166939 is in state 'finished'
[2026-01-09 21:36:46] 2026-01-10 02:35:52,845 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:36:46] 2026-01-10 02:35:55,261 | INFO     | PID=491909 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 21:36:46] 2026-01-10 02:35:55,261 | INFO     | .. there are 21 such processes running
[2026-01-09 21:36:46] 2026-01-10 02:35:55,361 | INFO     | monitor loop #425: job 0:6963166939 is in state 'finished'
[2026-01-09 21:36:46] 2026-01-10 02:35:55,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:36:46] 2026-01-10 02:35:56,262 | INFO     | time since job start (6106s) is within the limit (349056.0s)
[2026-01-09 21:36:46] 2026-01-10 02:35:57,873 | INFO     | monitor loop #426: job 0:6963166939 is in state 'finished'
[2026-01-09 21:36:46] 2026-01-10 02:35:57,873 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:36:46] 2026-01-10 02:35:58,269 | INFO     | time since job start (6108s) is within the limit (349056.0s)
[2026-01-09 21:36:46] 2026-01-10 02:36:00,276 | INFO     | time since job start (6110s) is within the limit (349056.0s)
[2026-01-09 21:36:46] 2026-01-10 02:36:00,378 | INFO     | monitor loop #427: job 0:6963166939 is in state 'finished'
[2026-01-09 21:36:46] 2026-01-10 02:36:00,379 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:36:46] 2026-01-10 02:36:02,283 | INFO     | time since job start (6112s) is within the limit (349056.0s)
[2026-01-09 21:36:46] 2026-01-10 02:36:02,885 | INFO     | monitor loop #428: job 0:6963166939 is in state 'finished'
[2026-01-09 21:36:46] 2026-01-10 02:36:02,886 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:36:46] 2026-01-10 02:36:04,290 | INFO     | time since job start (6114s) is within the limit (349056.0s)
[2026-01-09 21:36:46] 2026-01-10 02:36:05,389 | INFO     | monitor loop #429: job 0:6963166939 is in state 'finished'
[2026-01-09 21:36:46] 2026-01-10 02:36:05,395 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:36:46] 2026-01-10 02:36:06,297 | INFO     | time since job start (6116s) is within the limit (349056.0s)
[2026-01-09 21:36:46] 2026-01-10 02:36:07,944 | INFO     | monitor loop #430: job 0:6963166939 is in state 'finished'
[2026-01-09 21:36:46] 2026-01-10 02:36:07,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:36:46] 2026-01-10 02:36:08,304 | INFO     | time since job start (6118s) is within the limit (349056.0s)
[2026-01-09 21:36:46] 2026-01-10 02:36:10,276 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 21:36:46] 2026-01-10 02:36:10,281 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.2056249999996
[2026-01-09 21:36:46] 2026-01-10 02:36:10,293 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963166939/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:36:46] 2026-01-10 02:36:10,294 | INFO     | extracted standard info from prmon json
[2026-01-09 21:36:46] 2026-01-10 02:36:10,294 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:36:46] 2026-01-10 02:36:10,294 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:36:46] 2026-01-10 02:36:10,294 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:36:46] 2026-01-10 02:36:10,294 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:36:46] 2026-01-10 02:36:10,295 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:36:46] 2026-01-10 02:36:10,295 | INFO     | sum of square deviations: 233642937.6043954
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | sum of deviations: -7162899482.241755
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | mean x: 1768009641.0659342
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | mean y: 2729171.3736263737
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | intersect: 54205417566.0575
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | chi2: 0.16979647650054278
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | current memory leak: -30.66 B/s (using 91 data points, chi2=0.17)
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | could have reported an average CPU frequency of 3800 MHz (7 samples)
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | ..............................
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | . Timing measurements:
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | . get job = 0 s
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | . initial setup = 5 s
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | . payload setup = 50 s
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | . stage-in = 0 s
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | . payload execution = 5970 s
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | . stage-out = 1 s
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | . log creation = 0 s
[2026-01-09 21:36:46] 2026-01-10 02:36:10,296 | INFO     | ..............................
[2026-01-09 21:36:46] 2026-01-10 02:36:10,359 | INFO     | time since job start (6120s) is within the limit (349056.0s)
[2026-01-09 21:36:46] 2026-01-10 02:36:10,363 | INFO     | 
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | job summary report
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | --------------------------------------------------
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | PanDA job id: 6963166939
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | task id: 47898826
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | errors: (none)
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | pilot state: finished 
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | transexitcode: 0
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | exeerrorcode: 0
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | exeerrordiag: 
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | exitcode: 0
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | exitmsg: OK
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | cpuconsumptiontime: 32317 s
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | nevents: 400
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | neventsw: 0
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | pid: 503881
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | pgrp: 503881
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | corecount: 11
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | event service: False
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | sizes: {0: 2283744, 1: 2283999, 12: 2283999, 22: 2284027, 31: 2284317, 33: 2284345, 6024: 2311492, 6026: 2320490, 6028: 2320546, 6056: 2320740}
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | --------------------------------------------------
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | 
[2026-01-09 21:36:46] 2026-01-10 02:36:10,370 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,431 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,432 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:36:46] 2026-01-10 02:36:10,432 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,432 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:36:46] 2026-01-10 02:36:10,432 | INFO     | job 6963166939 has completed (purged errors)
[2026-01-09 21:36:46] 2026-01-10 02:36:10,432 | INFO     | overall cleanup function is called
[2026-01-09 21:36:46] 2026-01-10 02:36:11,444 | INFO     | --- collectZombieJob: --- 10, [503881]
[2026-01-09 21:36:46] 2026-01-10 02:36:11,445 | INFO     | zombie collector waiting for pid 503881
[2026-01-09 21:36:46] 2026-01-10 02:36:11,445 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:36:46] 2026-01-10 02:36:11,445 | INFO     | collected zombie processes
[2026-01-09 21:36:46] 2026-01-10 02:36:11,445 | INFO     | will attempt to kill all subprocesses of pid=503881
[2026-01-09 21:36:46] 2026-01-10 02:36:12,519 | INFO     | process IDs to be killed: [503881] (in reverse order)
[2026-01-09 21:36:46] 2026-01-10 02:36:13,181 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:36:46] 2026-01-10 02:36:13,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:36:46] 2026-01-10 02:36:13,219 | INFO     | did not find any defunct processes belonging to 503881
[2026-01-09 21:36:46] 2026-01-10 02:36:13,254 | INFO     | did not find any defunct processes belonging to 503881
[2026-01-09 21:36:46] 2026-01-10 02:36:13,255 | INFO     | ready for new job
[2026-01-09 21:36:46] 2026-01-10 02:36:13,255 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:36:46] 2026-01-10 02:36:13,256 | INFO     | ***************************************
[2026-01-09 21:36:46] 2026-01-10 02:36:13,256 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:36:46] 2026-01-10 02:36:13,256 | INFO     | ***************************************
[2026-01-09 21:36:46] 2026-01-10 02:36:13,256 | INFO     | 
[2026-01-09 21:36:46] 2026-01-10 02:36:13,264 | INFO     | architecture information:
[2026-01-09 21:36:46] 2026-01-10 02:36:13,265 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:36:46] 2026-01-10 02:36:13,313 | INFO     | cat /etc/os-release:
[2026-01-09 21:36:46] NAME="CentOS Linux"
[2026-01-09 21:36:46] VERSION="7 (Core)"
[2026-01-09 21:36:46] ID="centos"
[2026-01-09 21:36:46] ID_LIKE="rhel fedora"
[2026-01-09 21:36:46] VERSION_ID="7"
[2026-01-09 21:36:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:36:46] ANSI_COLOR="0;31"
[2026-01-09 21:36:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:36:46] HOME_URL="https://www.centos.org/"
[2026-01-09 21:36:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:36:46] 
[2026-01-09 21:36:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:36:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:36:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:36:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:36:46] 
[2026-01-09 21:36:46] 2026-01-10 02:36:13,313 | INFO     | ***************************************
[2026-01-09 21:36:46] 2026-01-10 02:36:13,817 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 21:36:46] 2026-01-10 02:36:13,874 | INFO     | sufficient remaining disk space (168764112896 B)
[2026-01-09 21:36:46] 2026-01-10 02:36:13,874 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:36:46] 2026-01-10 02:36:13,874 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:36:46] 2026-01-10 02:36:13,874 | INFO     | update_server=False
[2026-01-09 21:36:46] 2026-01-10 02:36:13,874 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:36:46] 2026-01-10 02:36:13,874 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:36:46] 2026-01-10 02:36:13,985 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:36:46] 2026-01-10 02:36:13,986 | INFO     | aborting loop
[2026-01-09 21:36:46] 2026-01-10 02:36:13,998 | INFO     | all data control threads have been joined
[2026-01-09 21:36:46] 2026-01-10 02:36:14,631 | INFO     | all job control threads have been joined
[2026-01-09 21:36:46] 2026-01-10 02:36:14,879 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:14,891 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:14,994 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:15,005 | INFO     | [data] control thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:15,145 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:15,318 | INFO     | all payload control threads have been joined
[2026-01-09 21:36:46] 2026-01-10 02:36:15,345 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:15,377 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:36:46] 2026-01-10 02:36:15,422 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:36:46] 2026-01-10 02:36:15,523 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:15,546 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:15,605 | INFO     | [job] validate thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:15,637 | INFO     | [job] control thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:15,881 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:15,911 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:15,986 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:16,324 | INFO     | [payload] control thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:16,382 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:19,431 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:36:46] 2026-01-10 02:36:20,723 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:36:46] 2026-01-10 02:36:21,649 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140370536040256)>', '<ExcThread(monitor, started 140370176362240)>']
[2026-01-09 21:36:46] 2026-01-10 02:36:26,713 | INFO     | all workflow threads have been joined
[2026-01-09 21:36:46] 2026-01-10 02:36:26,714 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:36:46] 2026-01-10 02:36:26,714 | INFO     | traces error code: 0
[2026-01-09 21:36:46] 2026-01-10 02:36:26,714 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:36:46] 2026-01-10 02:36:45,314 | INFO     | PID=491909 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 21:36:46] 2026-01-10 02:36:45,315 | INFO     | .. there are 21 such processes running
[2026-01-09 21:36:46] 2026-01-10 02:36:45,315 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:36:46] 2026-01-10 02:36:45,315 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:36:46] 2026-01-10 02:36:45,315 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:36:46] 2026-01-10 02:36:45,315 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:36:46] 2026-01-10 02:36:45,315 | INFO     | [monitor] control thread has ended
[2026-01-09 21:36:46] 2026-01-10 02:36:45,522 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:36:46] 2026-01-10 02:36:45,541 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:36:46] 2026-01-10 02:36:45,561 [wrapper] pilotpid: 491909
[2026-01-09 21:36:46] 2026-01-10 02:36:45,574 [wrapper] Pilot exit status: 0
[2026-01-09 21:36:46] 2026-01-10 02:36:45,683 [wrapper] pandaids: 6963166939
[2026-01-09 21:36:46] 2026-01-10 02:36:45,845 [wrapper] cleanup supervisor_pilot  724717 491910
[2026-01-09 21:36:46] 2026-01-10 02:36:45,858 [wrapper] Test setup, not cleaning
[2026-01-09 21:36:46] 2026-01-10 02:36:45,926 [wrapper] apfmon messages muted
[2026-01-09 21:36:46] 2026-01-10 02:36:45,941 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:36:46] 2026-01-10 02:36:45,964 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:36:46]  *** Error codes and diagnostics ***
[2026-01-09 21:36:46]     "exeErrorCode": 0,
[2026-01-09 21:36:46]     "exeErrorDiag": "",
[2026-01-09 21:36:46]     "pilotErrorCode": 0,
[2026-01-09 21:36:46]     "pilotErrorDiag": "",
[2026-01-09 21:36:46]  *** Listing of results directory ***
[2026-01-09 21:36:46] total 444316
[2026-01-09 21:36:46] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 21:36:46] -rwx------. 1 boincer umatlas     36322 Jan  8 19:59 runpilot2-wrapper.sh
[2026-01-09 21:36:46] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:02 queuedata.json
[2026-01-09 21:36:46] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:36:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:52 run_atlas
[2026-01-09 21:36:46] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:52 job.xml
[2026-01-09 21:36:46] -rw-r--r--. 2 boincer umatlas 228177540 Jan  9 19:52 EVNT.47898824._001369.pool.root.1
[2026-01-09 21:36:46] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 19:52 input.tar.gz
[2026-01-09 21:36:46] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:52 start_atlas.sh
[2026-01-09 21:36:46] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:52 shared
[2026-01-09 21:36:46] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:52 boinc_lockfile
[2026-01-09 21:36:46] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 19:52 pandaJob.out
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas        57 Jan  9 19:52 setup.sh.local
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas    989374 Jan  9 19:54 agis_schedconf.cvmfs.json
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:54 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:36:46] drwx------. 5 boincer umatlas      4096 Jan  9 19:54 pilot3
[2026-01-09 21:36:46] -rw-r--r--. 1 boincer umatlas      7183 Jan  9 21:28 init_data.xml
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas 220403219 Jan  9 21:34 HITS.47898826._035345.pool.root.1
[2026-01-09 21:36:46] -rw-r--r--. 1 boincer umatlas       529 Jan  9 21:34 boinc_task_state.xml
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas      1042 Jan  9 21:35 memory_monitor_summary.json
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas    401891 Jan  9 21:35 log.47898826._035345.job.log.tgz.1
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas        95 Jan  9 21:35 pilot_heartbeat.json
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas      7775 Jan  9 21:36 heartbeat.json
[2026-01-09 21:36:46] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:36 boinc_mmap_file
[2026-01-09 21:36:46] -rw-r--r--. 1 boincer umatlas        27 Jan  9 21:36 wrapper_checkpoint.txt
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas       822 Jan  9 21:36 pilotlog.txt
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas    838341 Jan  9 21:36 log.47898826._035345.job.log.1
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas       357 Jan  9 21:36 output.list
[2026-01-09 21:36:46] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:36 runtime_log
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas   1259520 Jan  9 21:36 result.tar.gz
[2026-01-09 21:36:46] -rw-r--r--. 1 boincer umatlas      9344 Jan  9 21:36 runtime_log.err
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas       652 Jan  9 21:36 c8hMDmM1Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlkgKDmRCgT8m.diag
[2026-01-09 21:36:46] -rw-r--r--. 1 boincer umatlas     22447 Jan  9 21:36 stderr.txt
[2026-01-09 21:36:46] HITS file was successfully produced:
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas 220403219 Jan  9 21:34 shared/HITS.pool.root.1
[2026-01-09 21:36:46]  *** Contents of shared directory: ***
[2026-01-09 21:36:46] total 439908
[2026-01-09 21:36:46] -rw-r--r--. 2 boincer umatlas 228177540 Jan  9 19:52 ATLAS.root_0
[2026-01-09 21:36:46] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 19:52 input.tar.gz
[2026-01-09 21:36:46] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:52 start_atlas.sh
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas 220403219 Jan  9 21:34 HITS.pool.root.1
[2026-01-09 21:36:46] -rw-------. 1 boincer umatlas   1259520 Jan  9 21:36 result.tar.gz
21:36:48 (487157): run_atlas exited; CPU time 32489.176377
21:36:48 (487157): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN