Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:01:17 (960414): wrapper (7.7.26015): starting
00:01:17 (960414): wrapper: running run_atlas (--nthreads 11)
[2026-01-10 00:01:17] Arguments: --nthreads 11
[2026-01-10 00:01:17] Threads: 11
[2026-01-10 00:01:17] Checking for CVMFS
[2026-01-10 00:01:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 00:01:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 00:01:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 00:01:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 00:01:19] 2.13.3.0 7069 24535 254640 154968 1 277 33776682 40960001 15992 16776704 0 37740820 99.825 48886212 31799 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 00:01:19] CVMFS is ok
[2026-01-10 00:01:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 00:01:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 00:01:19] Further information can be found at the LHC@home message board.
[2026-01-10 00:01:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 00:01:19] Checking for apptainer binary...
[2026-01-10 00:01:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 00:01:19] Running /usr/bin/apptainer --version
[2026-01-10 00:01:20] apptainer version 1.4.5-2.el9
[2026-01-10 00:01:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 00:01:21] c-210-35-3.aglt2.org
[2026-01-10 00:01:21] apptainer works
[2026-01-10 00:01:21] Set ATHENA_PROC_NUMBER=11
[2026-01-10 00:01:21] Set ATHENA_CORE_NUMBER=11
[2026-01-10 00:01:21] Starting ATLAS job with PandaID=6963186898
[2026-01-10 00:01:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 07:51:29]  *** The last 200 lines of the pilot log: ***
[2026-01-10 07:51:29] 2026-01-10 08:31:37,574 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2874.9511607142863
[2026-01-10 07:51:29] 2026-01-10 08:31:37,597 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6963186898/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 07:51:29] 2026-01-10 08:31:37,598 | INFO     | extracted standard info from prmon json
[2026-01-10 07:51:29] 2026-01-10 08:31:37,598 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 07:51:29] 2026-01-10 08:31:37,598 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 07:51:29] 2026-01-10 08:31:37,598 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 07:51:29] 2026-01-10 08:31:37,598 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 07:51:29] 2026-01-10 08:31:37,602 | INFO     | fitting pss+swap vs Time
[2026-01-10 07:51:29] 2026-01-10 08:31:37,602 | INFO     | sum of square deviations: 2632430420.2941127
[2026-01-10 07:51:29] 2026-01-10 08:31:37,603 | INFO     | sum of deviations: 41014754446.11764
[2026-01-10 07:51:29] 2026-01-10 08:31:37,604 | INFO     | mean x: 1768027660.5588236
[2026-01-10 07:51:29] 2026-01-10 08:31:37,604 | INFO     | mean y: 2601695.8235294116
[2026-01-10 07:51:29] 2026-01-10 08:31:37,604 | INFO     | intersect: -27544268980.310844
[2026-01-10 07:51:29] 2026-01-10 08:31:37,604 | INFO     | chi2: 2.78270123264702
[2026-01-10 07:51:29] 2026-01-10 08:31:37,604 | INFO     | sum of square deviations: 2443550801.497476
[2026-01-10 07:51:29] 2026-01-10 08:31:37,605 | INFO     | sum of deviations: 55010553122.96986
[2026-01-10 07:51:29] 2026-01-10 08:31:37,606 | INFO     | mean x: 1768027508.0502512
[2026-01-10 07:51:29] 2026-01-10 08:31:37,606 | INFO     | mean y: 2612754.6030150754
[2026-01-10 07:51:29] 2026-01-10 08:31:37,606 | INFO     | intersect: -39800190238.0201
[2026-01-10 07:51:29] 2026-01-10 08:31:37,606 | INFO     | chi2: 1.9084167744854617
[2026-01-10 07:51:29] 2026-01-10 08:31:37,606 | INFO     | current chi2=1.9084167744854617 (change=31.41855287604495 %)
[2026-01-10 07:51:29] 2026-01-10 08:31:37,606 | INFO     | sum of square deviations: 2263889902.3711295
[2026-01-10 07:51:29] 2026-01-10 08:31:37,607 | INFO     | sum of deviations: 53487415489.23711
[2026-01-10 07:51:29] 2026-01-10 08:31:37,608 | INFO     | mean x: 1768027355.5257733
[2026-01-10 07:51:29] 2026-01-10 08:31:37,608 | INFO     | mean y: 2611461.2525773197
[2026-01-10 07:51:29] 2026-01-10 08:31:37,608 | INFO     | intersect: -41769390641.101135
[2026-01-10 07:51:29] 2026-01-10 08:31:37,608 | INFO     | chi2: 1.908696390507563
[2026-01-10 07:51:29] 2026-01-10 08:31:37,608 | INFO     | current chi2=1.908696390507563 (change=-0.014651727329143634 %)
[2026-01-10 07:51:29] 2026-01-10 08:31:37,611 | INFO     | right removable region: 193
[2026-01-10 07:51:29] 2026-01-10 08:31:37,612 | INFO     | sum of square deviations: 2443517746.7135706
[2026-01-10 07:51:29] 2026-01-10 08:31:37,613 | INFO     | sum of deviations: -1972859051.844225
[2026-01-10 07:51:29] 2026-01-10 08:31:37,613 | INFO     | mean x: 1768027813.080402
[2026-01-10 07:51:29] 2026-01-10 08:31:37,613 | INFO     | mean y: 2636153.552763819
[2026-01-10 07:51:29] 2026-01-10 08:31:37,613 | INFO     | intersect: 1430114910.2097712
[2026-01-10 07:51:29] 2026-01-10 08:31:37,614 | INFO     | chi2: 0.9412376653531912
[2026-01-10 07:51:29] 2026-01-10 08:31:37,614 | INFO     | current chi2=0.9412376653531912 (change=66.17539625488837 %)
[2026-01-10 07:51:29] 2026-01-10 08:31:37,614 | INFO     | sum of square deviations: 2263872588.6391683
[2026-01-10 07:51:29] 2026-01-10 08:31:37,615 | INFO     | sum of deviations: -3723380571.21649
[2026-01-10 07:51:29] 2026-01-10 08:31:37,615 | INFO     | mean x: 1768027965.597938
[2026-01-10 07:51:29] 2026-01-10 08:31:37,615 | INFO     | mean y: 2637568.9587628865
[2026-01-10 07:51:29] 2026-01-10 08:31:37,616 | INFO     | intersect: 2910504826.82061
[2026-01-10 07:51:29] 2026-01-10 08:31:37,616 | INFO     | chi2: 0.9106084268985869
[2026-01-10 07:51:29] 2026-01-10 08:31:37,616 | INFO     | current chi2=0.9106084268985869 (change=3.254145003123196 %)
[2026-01-10 07:51:29] 2026-01-10 08:31:37,616 | INFO     | left removable region: 20
[2026-01-10 07:51:29] 2026-01-10 08:31:37,616 | INFO     | sum of square deviations: 1605288778.8670475
[2026-01-10 07:51:29] 2026-01-10 08:31:37,617 | INFO     | sum of deviations: 7619147758.849705
[2026-01-10 07:51:29] 2026-01-10 08:31:37,617 | INFO     | mean x: 1768027935.0809247
[2026-01-10 07:51:29] 2026-01-10 08:31:37,617 | INFO     | mean y: 2652471.4393063583
[2026-01-10 07:51:29] 2026-01-10 08:31:37,617 | INFO     | intersect: -8388900659.993363
[2026-01-10 07:51:29] 2026-01-10 08:31:37,618 | INFO     | chi2: 0.0007419068957465222
[2026-01-10 07:51:29] 2026-01-10 08:31:37,618 | INFO     | current memory leak: 4.75 B/s (using 173 data points, chi2=0.00)
[2026-01-10 07:51:29] 2026-01-10 08:31:37,618 | INFO     | could have reported an average CPU frequency of 2942 MHz (10 samples)
[2026-01-10 07:51:29] 2026-01-10 08:31:37,619 | INFO     | ..............................
[2026-01-10 07:51:29] 2026-01-10 08:31:37,619 | INFO     | . Timing measurements:
[2026-01-10 07:51:29] 2026-01-10 08:31:37,619 | INFO     | . get job = 0 s
[2026-01-10 07:51:29] 2026-01-10 08:31:37,619 | INFO     | . initial setup = 4 s
[2026-01-10 07:51:29] 2026-01-10 08:31:37,619 | INFO     | . payload setup = 31 s
[2026-01-10 07:51:29] 2026-01-10 08:31:37,619 | INFO     | . stage-in = 0 s
[2026-01-10 07:51:29] 2026-01-10 08:31:37,619 | INFO     | . payload execution = 12443 s
[2026-01-10 07:51:29] 2026-01-10 08:31:37,619 | INFO     | . stage-out = 2 s
[2026-01-10 07:51:29] 2026-01-10 08:31:37,619 | INFO     | . log creation = 0 s
[2026-01-10 07:51:29] 2026-01-10 08:31:37,619 | INFO     | ..............................
[2026-01-10 07:51:29] 2026-01-10 08:31:37,746 | INFO     | 
[2026-01-10 07:51:29] 2026-01-10 08:31:37,746 | INFO     | job summary report
[2026-01-10 07:51:29] 2026-01-10 08:31:37,746 | INFO     | --------------------------------------------------
[2026-01-10 07:51:29] 2026-01-10 08:31:37,746 | INFO     | PanDA job id: 6963186898
[2026-01-10 07:51:29] 2026-01-10 08:31:37,746 | INFO     | task id: 47898826
[2026-01-10 07:51:29] 2026-01-10 08:31:37,746 | INFO     | errors: (none)
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | pilot state: finished 
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | transexitcode: 0
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | exeerrorcode: 0
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | exeerrordiag: 
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | exitcode: 0
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | exitmsg: OK
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | cpuconsumptiontime: 55218 s
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | nevents: 400
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | neventsw: 0
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | pid: 973371
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | pgrp: 973371
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | corecount: 11
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | event service: False
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | sizes: {0: 2283799, 1: 2283998, 12: 2283998, 23: 2284026, 27: 2284316, 34: 2284344, 12478: 2314280, 12481: 2323278, 12482: 2323334, 12490: 2323528}
[2026-01-10 07:51:29] 2026-01-10 08:31:37,747 | INFO     | --------------------------------------------------
[2026-01-10 07:51:29] 2026-01-10 08:31:37,748 | INFO     | 
[2026-01-10 07:51:29] 2026-01-10 08:31:37,748 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-10 07:51:29] 2026-01-10 08:31:37,768 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,769 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,769 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,769 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,769 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,769 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,769 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,769 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,769 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,769 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,769 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,769 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,769 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,769 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,770 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,770 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,770 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,770 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 07:51:29] 2026-01-10 08:31:37,770 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,770 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 07:51:29] 2026-01-10 08:31:37,770 | INFO     | job 6963186898 has completed (purged errors)
[2026-01-10 07:51:29] 2026-01-10 08:31:37,770 | INFO     | overall cleanup function is called
[2026-01-10 07:51:29] 2026-01-10 08:31:38,085 | INFO     | PID=966129 has CPU usage=12.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 07:51:29] 2026-01-10 08:31:38,086 | INFO     | .. there are 17 such processes running
[2026-01-10 07:51:29] 2026-01-10 08:31:38,788 | INFO     | --- collectZombieJob: --- 10, [973371]
[2026-01-10 07:51:29] 2026-01-10 08:31:38,788 | INFO     | zombie collector waiting for pid 973371
[2026-01-10 07:51:29] 2026-01-10 08:31:38,788 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 07:51:29] 2026-01-10 08:31:38,788 | INFO     | collected zombie processes
[2026-01-10 07:51:29] 2026-01-10 08:31:38,788 | INFO     | will attempt to kill all subprocesses of pid=973371
[2026-01-10 07:51:29] 2026-01-10 08:31:39,087 | INFO     | process IDs to be killed: [973371] (in reverse order)
[2026-01-10 07:51:29] 2026-01-10 08:31:39,196 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 07:51:29] 2026-01-10 08:31:39,196 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 07:51:29] 2026-01-10 08:31:39,207 | INFO     | did not find any defunct processes belonging to 973371
[2026-01-10 07:51:29] 2026-01-10 08:31:39,219 | INFO     | did not find any defunct processes belonging to 973371
[2026-01-10 07:51:29] 2026-01-10 08:31:39,219 | INFO     | ready for new job
[2026-01-10 07:51:29] 2026-01-10 08:31:39,219 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 07:51:29] 2026-01-10 08:31:39,221 | INFO     | ***************************************
[2026-01-10 07:51:29] 2026-01-10 08:31:39,221 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 07:51:29] 2026-01-10 08:31:39,221 | INFO     | ***************************************
[2026-01-10 07:51:29] 2026-01-10 08:31:39,221 | INFO     | 
[2026-01-10 07:51:29] 2026-01-10 08:31:39,224 | INFO     | architecture information:
[2026-01-10 07:51:29] 2026-01-10 08:31:39,224 | INFO     | executing command: cat /etc/os-release
[2026-01-10 07:51:29] 2026-01-10 08:31:39,240 | INFO     | cat /etc/os-release:
[2026-01-10 07:51:29] NAME="CentOS Linux"
[2026-01-10 07:51:29] VERSION="7 (Core)"
[2026-01-10 07:51:29] ID="centos"
[2026-01-10 07:51:29] ID_LIKE="rhel fedora"
[2026-01-10 07:51:29] VERSION_ID="7"
[2026-01-10 07:51:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 07:51:29] ANSI_COLOR="0;31"
[2026-01-10 07:51:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 07:51:29] HOME_URL="https://www.centos.org/"
[2026-01-10 07:51:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 07:51:29] 
[2026-01-10 07:51:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 07:51:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 07:51:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 07:51:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 07:51:29] 
[2026-01-10 07:51:29] 2026-01-10 08:31:39,240 | INFO     | ***************************************
[2026-01-10 07:51:29] 2026-01-10 08:31:39,743 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-10 07:51:29] 2026-01-10 08:31:39,779 | INFO     | sufficient remaining disk space (73275539456 B)
[2026-01-10 07:51:29] 2026-01-10 08:31:39,779 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 07:51:29] 2026-01-10 08:31:39,779 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 07:51:29] 2026-01-10 08:31:39,780 | INFO     | update_server=False
[2026-01-10 07:51:29] 2026-01-10 08:31:39,780 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 07:51:29] 2026-01-10 08:31:39,780 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 07:51:29] 2026-01-10 08:31:39,781 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:51:29] 2026-01-10 08:31:39,781 | INFO     | aborting loop
[2026-01-10 07:51:29] 2026-01-10 08:31:39,781 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 07:51:29] 2026-01-10 08:31:39,810 | INFO     | all data control threads have been joined
[2026-01-10 07:51:29] 2026-01-10 08:31:39,911 | INFO     | all payload control threads have been joined
[2026-01-10 07:51:29] 2026-01-10 08:31:40,786 | INFO     | [job] job monitor thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:40,787 | INFO     | [job] retrieve thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:40,816 | INFO     | [data] control thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:40,839 | INFO     | all job control threads have been joined
[2026-01-10 07:51:29] 2026-01-10 08:31:40,917 | INFO     | [payload] control thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:41,361 | INFO     | [job] validate thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:41,375 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:41,409 | INFO     | [payload] validate_post thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:41,738 | INFO     | [data] copytool_in thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:41,787 | INFO     | [data] copytool_out thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:41,846 | INFO     | [job] control thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:42,246 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:42,282 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:42,374 | INFO     | [payload] failed_post thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:42,763 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 07:51:29] 2026-01-10 08:31:43,768 | INFO     | [job] queue monitor thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:43,788 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:45,587 | INFO     | [monitor] cgroup control has ended
[2026-01-10 07:51:29] 2026-01-10 08:31:50,084 | INFO     | job.realtimelogging is not enabled
[2026-01-10 07:51:29] 2026-01-10 08:31:51,090 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 07:51:29] 2026-01-10 08:31:52,869 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336960460608)>', '<ExcThread(monitor, started 140336470927104)>']
[2026-01-10 07:51:29] 2026-01-10 08:31:57,895 | INFO     | all workflow threads have been joined
[2026-01-10 07:51:29] 2026-01-10 08:31:57,895 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 07:51:29] 2026-01-10 08:31:57,895 | INFO     | traces error code: 0
[2026-01-10 07:51:29] 2026-01-10 08:31:57,895 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 07:51:29] 2026-01-10 08:32:10,563 | INFO     | PID=966129 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 07:51:29] 2026-01-10 08:32:10,563 | INFO     | .. there are 17 such processes running
[2026-01-10 07:51:29] 2026-01-10 08:32:10,564 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 07:51:29] 2026-01-10 08:32:10,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 07:51:29] 2026-01-10 08:32:10,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 07:51:29] 2026-01-10 08:32:10,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 07:51:29] 2026-01-10 08:32:10,564 | INFO     | [monitor] control thread has ended
[2026-01-10 07:51:29] 2026-01-10 08:32:10,719 [wrapper] ==== pilot stdout END ====
[2026-01-10 07:51:29] 2026-01-10 08:32:10,722 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 07:51:29] 2026-01-10 08:32:10,725 [wrapper] pilotpid: 966129
[2026-01-10 07:51:29] 2026-01-10 08:32:10,727 [wrapper] Pilot exit status: 0
[2026-01-10 07:51:29] 2026-01-10 08:32:10,742 [wrapper] pandaids: 6963186898
[2026-01-10 07:51:29] 2026-01-10 08:32:10,810 [wrapper] cleanup supervisor_pilot 1462529 966130
[2026-01-10 07:51:29] 2026-01-10 08:32:10,815 [wrapper] Test setup, not cleaning
[2026-01-10 07:51:29] 2026-01-10 08:32:10,818 [wrapper] apfmon messages muted
[2026-01-10 07:51:29] 2026-01-10 08:32:10,821 [wrapper] ==== wrapper stdout END ====
[2026-01-10 07:51:29] 2026-01-10 08:32:10,824 [wrapper] ==== wrapper stderr END ====
[2026-01-10 07:51:29]  *** Error codes and diagnostics ***
[2026-01-10 07:51:29]     "exeErrorCode": 0,
[2026-01-10 07:51:29]     "exeErrorDiag": "",
[2026-01-10 07:51:29]     "pilotErrorCode": 0,
[2026-01-10 07:51:29]     "pilotErrorDiag": "",
[2026-01-10 07:51:29]  *** Listing of results directory ***
[2026-01-10 07:51:29] total 440380
[2026-01-10 07:51:29] -rwx------. 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-10 07:51:29] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-10 07:51:29] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-10 07:51:29] -rw-r--r--. 1 boincer umatlas       100 Jan 10 00:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 07:51:29] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 10 00:01 run_atlas
[2026-01-10 07:51:29] -rw-r--r--. 1 boincer umatlas       105 Jan 10 00:01 job.xml
[2026-01-10 07:51:29] -rw-r--r--. 2 boincer umatlas 224246184 Jan 10 00:01 EVNT.47898824._001411.pool.root.1
[2026-01-10 07:51:29] drwxrwx--x. 2 boincer umatlas      4096 Jan 10 00:01 shared
[2026-01-10 07:51:29] -rw-r--r--. 2 boincer umatlas    592401 Jan 10 00:01 input.tar.gz
[2026-01-10 07:51:29] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 00:01 start_atlas.sh
[2026-01-10 07:51:29] -rw-r--r--. 1 boincer umatlas         0 Jan 10 00:01 boinc_lockfile
[2026-01-10 07:51:29] -rw-r--r--. 1 boincer umatlas      2519 Jan 10 00:01 pandaJob.out
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas        57 Jan 10 00:01 setup.sh.local
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas    989374 Jan 10 00:02 agis_schedconf.cvmfs.json
[2026-01-10 07:51:29] drwx------. 5 boincer umatlas      4096 Jan 10 00:02 pilot3
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas 218613222 Jan 10 03:30 HITS.47898826._036806.pool.root.1
[2026-01-10 07:51:29] -rw-r--r--. 1 boincer umatlas       530 Jan 10 03:31 boinc_task_state.xml
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas      1041 Jan 10 03:31 memory_monitor_summary.json
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas   1516240 Jan 10 03:31 agis_ddmendpoints.agis.ALL.json
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas    471909 Jan 10 03:31 log.47898826._036806.job.log.tgz.1
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas        95 Jan 10 03:31 pilot_heartbeat.json
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas      7827 Jan 10 03:31 heartbeat.json
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas       822 Jan 10 03:32 pilotlog.txt
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas   1616068 Jan 10 03:32 log.47898826._036806.job.log.1
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas       357 Jan 10 03:32 output.list
[2026-01-10 07:51:29] -rw-r--r--. 1 boincer umatlas       620 Jan 10 03:32 runtime_log
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas   2109440 Jan 10 03:32 result.tar.gz
[2026-01-10 07:51:29] -rw-r--r--. 1 boincer umatlas      9355 Jan 10 03:32 runtime_log.err
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas       656 Jan 10 03:32 0YSKDmm3Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVpgKDmWsGvTn.diag
[2026-01-10 07:51:29] -rw-r--r--. 1 boincer umatlas      6840 Jan 10 07:49 init_data.xml
[2026-01-10 07:51:29] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 07:51 boinc_mmap_file
[2026-01-10 07:51:29] -rw-r--r--. 1 boincer umatlas        27 Jan 10 07:51 wrapper_checkpoint.txt
[2026-01-10 07:51:29] -rw-r--r--. 1 boincer umatlas     21041 Jan 10 07:51 stderr.txt
[2026-01-10 07:51:29] HITS file was successfully produced:
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas 218613222 Jan 10 03:30 shared/HITS.pool.root.1
[2026-01-10 07:51:29]  *** Contents of shared directory: ***
[2026-01-10 07:51:29] total 435144
[2026-01-10 07:51:29] -rw-r--r--. 2 boincer umatlas 224246184 Jan 10 00:01 ATLAS.root_0
[2026-01-10 07:51:29] -rw-r--r--. 2 boincer umatlas    592401 Jan 10 00:01 input.tar.gz
[2026-01-10 07:51:29] -rw-r--r--. 2 boincer umatlas     15847 Jan 10 00:01 start_atlas.sh
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas 218613222 Jan 10 03:30 HITS.pool.root.1
[2026-01-10 07:51:29] -rw-------. 1 boincer umatlas   2109440 Jan 10 03:32 result.tar.gz
07:51:52 (960414): run_atlas exited; CPU time 55599.647559
07:51:52 (960414): called boinc_finish(0)

</stderr_txt>
]]>

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