Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:49:35 (1128974): wrapper (7.7.26015): starting
02:49:35 (1128974): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 02:49:35] Arguments: --nthreads 12
[2026-01-11 02:49:35] Threads: 12
[2026-01-11 02:49:35] Checking for CVMFS
[2026-01-11 02:49:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 02:49:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 02:49:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 02:49:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 02:49:35] 2.13.3.0 1088337 34 39820 155010 1 188 4006508 6144001 1834 130560 0 116180 99.994 1352 503 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-11 02:49:35] CVMFS is ok
[2026-01-11 02:49:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 02:49:35] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-11 02:49:35] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-11 02:49:35] Further information can be found at the LHC@home message board.
[2026-01-11 02:49:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 02:49:35] Checking for apptainer binary...
[2026-01-11 02:49:35] apptainer is not installed, using version from CVMFS
[2026-01-11 02:49:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 02:49:37] XeonFire
[2026-01-11 02:49:37] apptainer works
[2026-01-11 02:49:37] Set ATHENA_PROC_NUMBER=12
[2026-01-11 02:49:37] Set ATHENA_CORE_NUMBER=12
[2026-01-11 02:49:37] Starting ATLAS job with PandaID=6963162458
[2026-01-11 02:49:37] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 04:10:10]  *** The last 200 lines of the pilot log: ***
[2026-01-11 04:10:10]  workdir=None
[2026-01-11 04:10:10] ]
[2026-01-11 04:10:10] 2026-01-11 10:09:12,845 | INFO     | transferring file log.47898826._034079.job.log.tgz.1 from /var/lib/boinc-client/slots/5/PanDA_Pilot-6963162458/log.47898826._034079.job.log.tgz.1 to /var/lib/boinc
[2026-01-11 04:10:10] 2026-01-11 10:09:12,845 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/5/PanDA_Pilot-6963162458/log.47898826._034079.job.log.tgz.1 /var/lib/boinc-client/slots/5/log.478988
[2026-01-11 04:10:10] 2026-01-11 10:09:12,864 | INFO     | adding to output.list: log.47898826._034079.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/42/b4/log.47898826._034079.job.log.tg
[2026-01-11 04:10:10] 2026-01-11 10:09:12,865 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 04:10:10] 2026-01-11 10:09:12,865 | INFO     | summary of transferred files:
[2026-01-11 04:10:10] 2026-01-11 10:09:12,865 | INFO     |  -- lfn=log.47898826._034079.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 04:10:10] 2026-01-11 10:09:12,865 | INFO     | stage-out finished correctly
[2026-01-11 04:10:10] 2026-01-11 10:09:13,257 | INFO     | PID=1133022 has CPU usage=12.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 04:10:10] 2026-01-11 10:09:13,257 | INFO     | .. there are 2 such processes running
[2026-01-11 04:10:10] 2026-01-11 10:09:14,258 | INFO     | time since job start (4756s) is within the limit (349056.0s)
[2026-01-11 04:10:10] 2026-01-11 10:09:14,361 | INFO     | monitor loop #349: job 0:6963162458 is in state 'finished'
[2026-01-11 04:10:10] 2026-01-11 10:09:14,361 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:10:10] 2026-01-11 10:09:16,073 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 04:10:10] 2026-01-11 10:09:16,165 | INFO     | job 6963162458 has state=finished
[2026-01-11 04:10:10] 2026-01-11 10:09:16,166 | INFO     | preparing for final server update for job 6963162458 in state='finished'
[2026-01-11 04:10:10] 2026-01-11 10:09:16,166 | INFO     | this job has now completed (state=finished)
[2026-01-11 04:10:10] 2026-01-11 10:09:16,166 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 04:10:10] 2026-01-11 10:09:16,167 | INFO     | log transfer has been attempted: DONE
[2026-01-11 04:10:10] 2026-01-11 10:09:16,167 | INFO     | job 6963162458 has finished - writing final server update
[2026-01-11 04:10:10] 2026-01-11 10:09:16,167 | INFO     | total number of processed events: 400 (read)
[2026-01-11 04:10:10] 2026-01-11 10:09:16,171 | INFO     | executing command: lscpu
[2026-01-11 04:10:10] 2026-01-11 10:09:16,230 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 04:10:10] 2026-01-11 10:09:16,263 | INFO     | time since job start (4758s) is within the limit (349056.0s)
[2026-01-11 04:10:10] 2026-01-11 10:09:16,865 | INFO     | monitor loop #350: job 0:6963162458 is in state 'finished'
[2026-01-11 04:10:10] 2026-01-11 10:09:16,865 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:10:10] 2026-01-11 10:09:18,270 | INFO     | time since job start (4760s) is within the limit (349056.0s)
[2026-01-11 04:10:10] 2026-01-11 10:09:19,368 | INFO     | monitor loop #351: job 0:6963162458 is in state 'finished'
[2026-01-11 04:10:10] 2026-01-11 10:09:19,369 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:10:10] 2026-01-11 10:09:20,276 | INFO     | time since job start (4762s) is within the limit (349056.0s)
[2026-01-11 04:10:10] 2026-01-11 10:09:21,872 | INFO     | monitor loop #352: job 0:6963162458 is in state 'finished'
[2026-01-11 04:10:10] 2026-01-11 10:09:21,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:10:10] 2026-01-11 10:09:22,282 | INFO     | time since job start (4764s) is within the limit (349056.0s)
[2026-01-11 04:10:10] 2026-01-11 10:09:24,289 | INFO     | time since job start (4766s) is within the limit (349056.0s)
[2026-01-11 04:10:10] 2026-01-11 10:09:24,375 | INFO     | monitor loop #353: job 0:6963162458 is in state 'finished'
[2026-01-11 04:10:10] 2026-01-11 10:09:24,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 04:10:10] 2026-01-11 10:09:24,728 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 04:10:10] 2026-01-11 10:09:24,755 | INFO     | found 44 cores (22 cores per socket, 2 sockets) HT, CPU MHz: 2111.0326249999994
[2026-01-11 04:10:10] 2026-01-11 10:09:24,782 | INFO     | using path: /var/lib/boinc-client/slots/5/PanDA_Pilot-6963162458/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 04:10:10] 2026-01-11 10:09:24,783 | INFO     | extracted standard info from prmon json
[2026-01-11 04:10:10] 2026-01-11 10:09:24,783 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 04:10:10] 2026-01-11 10:09:24,783 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 04:10:10] 2026-01-11 10:09:24,783 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 04:10:10] 2026-01-11 10:09:24,784 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 04:10:10] 2026-01-11 10:09:24,785 | INFO     | fitting pss+swap vs Time
[2026-01-11 04:10:10] 2026-01-11 10:09:24,785 | INFO     | sum of square deviations: 110960220.0
[2026-01-11 04:10:10] 2026-01-11 10:09:24,786 | INFO     | sum of deviations: -2613168202.9999995
[2026-01-11 04:10:10] 2026-01-11 10:09:24,786 | INFO     | mean x: 1768123868.0
[2026-01-11 04:10:10] 2026-01-11 10:09:24,786 | INFO     | mean y: 2716899.61971831
[2026-01-11 04:10:10] 2026-01-11 10:09:24,786 | INFO     | intersect: 41642910753.08331
[2026-01-11 04:10:10] 2026-01-11 10:09:24,786 | INFO     | chi2: 0.013423945001408972
[2026-01-11 04:10:10] 2026-01-11 10:09:24,786 | INFO     | current memory leak: -23.55 B/s (using 71 data points, chi2=0.01)
[2026-01-11 04:10:10] 2026-01-11 10:09:24,786 | INFO     | could have reported an average CPU frequency of 2535 MHz (6 samples)
[2026-01-11 04:10:10] 2026-01-11 10:09:24,787 | INFO     | ..............................
[2026-01-11 04:10:10] 2026-01-11 10:09:24,787 | INFO     | . Timing measurements:
[2026-01-11 04:10:10] 2026-01-11 10:09:24,787 | INFO     | . get job = 0 s
[2026-01-11 04:10:10] 2026-01-11 10:09:24,787 | INFO     | . initial setup = 8 s
[2026-01-11 04:10:10] 2026-01-11 10:09:24,787 | INFO     | . payload setup = 6 s
[2026-01-11 04:10:10] 2026-01-11 10:09:24,787 | INFO     | . stage-in = 0 s
[2026-01-11 04:10:10] 2026-01-11 10:09:24,787 | INFO     | . payload execution = 4724 s
[2026-01-11 04:10:10] 2026-01-11 10:09:24,787 | INFO     | . stage-out = 0 s
[2026-01-11 04:10:10] 2026-01-11 10:09:24,787 | INFO     | . log creation = 0 s
[2026-01-11 04:10:10] 2026-01-11 10:09:24,787 | INFO     | ..............................
[2026-01-11 04:10:10] 2026-01-11 10:09:24,986 | INFO     | 
[2026-01-11 04:10:10] 2026-01-11 10:09:24,987 | INFO     | job summary report
[2026-01-11 04:10:10] 2026-01-11 10:09:24,987 | INFO     | --------------------------------------------------
[2026-01-11 04:10:10] 2026-01-11 10:09:24,987 | INFO     | PanDA job id: 6963162458
[2026-01-11 04:10:10] 2026-01-11 10:09:24,987 | INFO     | task id: 47898826
[2026-01-11 04:10:10] 2026-01-11 10:09:24,987 | INFO     | errors: (none)
[2026-01-11 04:10:10] 2026-01-11 10:09:24,987 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 04:10:10] 2026-01-11 10:09:24,988 | INFO     | pilot state: finished 
[2026-01-11 04:10:10] 2026-01-11 10:09:24,988 | INFO     | transexitcode: 0
[2026-01-11 04:10:10] 2026-01-11 10:09:24,988 | INFO     | exeerrorcode: 0
[2026-01-11 04:10:10] 2026-01-11 10:09:24,988 | INFO     | exeerrordiag: 
[2026-01-11 04:10:10] 2026-01-11 10:09:24,988 | INFO     | exitcode: 0
[2026-01-11 04:10:10] 2026-01-11 10:09:24,988 | INFO     | exitmsg: OK
[2026-01-11 04:10:10] 2026-01-11 10:09:24,988 | INFO     | cpuconsumptiontime: 51548 s
[2026-01-11 04:10:10] 2026-01-11 10:09:24,988 | INFO     | nevents: 400
[2026-01-11 04:10:10] 2026-01-11 10:09:24,988 | INFO     | neventsw: 0
[2026-01-11 04:10:10] 2026-01-11 10:09:24,989 | INFO     | pid: 1140027
[2026-01-11 04:10:10] 2026-01-11 10:09:24,989 | INFO     | pgrp: 1140027
[2026-01-11 04:10:10] 2026-01-11 10:09:24,989 | INFO     | corecount: 12
[2026-01-11 04:10:10] 2026-01-11 10:09:24,989 | INFO     | event service: False
[2026-01-11 04:10:10] 2026-01-11 10:09:24,989 | INFO     | sizes: {0: 2283807, 1: 2284006, 6: 2284268, 11: 2284296, 4735: 2310407, 4737: 2319419, 4740: 2319603, 4749: 2319797}
[2026-01-11 04:10:10] 2026-01-11 10:09:24,989 | INFO     | --------------------------------------------------
[2026-01-11 04:10:10] 2026-01-11 10:09:24,989 | INFO     | 
[2026-01-11 04:10:10] 2026-01-11 10:09:24,989 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/5
[2026-01-11 04:10:10] 2026-01-11 10:09:25,017 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,017 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,017 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,017 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,018 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,018 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,018 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,018 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,018 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,018 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,018 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,018 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,018 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,018 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,018 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,018 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,018 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,019 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 04:10:10] 2026-01-11 10:09:25,019 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,019 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 04:10:10] 2026-01-11 10:09:25,019 | INFO     | job 6963162458 has completed (purged errors)
[2026-01-11 04:10:10] 2026-01-11 10:09:25,019 | INFO     | overall cleanup function is called
[2026-01-11 04:10:10] 2026-01-11 10:09:26,026 | INFO     | --- collectZombieJob: --- 10, [1140027]
[2026-01-11 04:10:10] 2026-01-11 10:09:26,026 | INFO     | zombie collector waiting for pid 1140027
[2026-01-11 04:10:10] 2026-01-11 10:09:26,026 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 04:10:10] 2026-01-11 10:09:26,026 | INFO     | collected zombie processes
[2026-01-11 04:10:10] 2026-01-11 10:09:26,027 | INFO     | will attempt to kill all subprocesses of pid=1140027
[2026-01-11 04:10:10] 2026-01-11 10:09:26,379 | INFO     | process IDs to be killed: [1140027] (in reverse order)
[2026-01-11 04:10:10] 2026-01-11 10:09:26,478 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 04:10:10] 2026-01-11 10:09:26,478 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 04:10:10] 2026-01-11 10:09:26,484 | INFO     | did not find any defunct processes belonging to 1140027
[2026-01-11 04:10:10] 2026-01-11 10:09:26,489 | INFO     | did not find any defunct processes belonging to 1140027
[2026-01-11 04:10:10] 2026-01-11 10:09:26,490 | INFO     | ready for new job
[2026-01-11 04:10:10] 2026-01-11 10:09:26,490 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 04:10:10] 2026-01-11 10:09:26,491 | INFO     | ***************************************
[2026-01-11 04:10:10] 2026-01-11 10:09:26,491 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 04:10:10] 2026-01-11 10:09:26,491 | INFO     | ***************************************
[2026-01-11 04:10:10] 2026-01-11 10:09:26,492 | INFO     | 
[2026-01-11 04:10:10] 2026-01-11 10:09:26,495 | INFO     | architecture information:
[2026-01-11 04:10:10] 2026-01-11 10:09:26,496 | INFO     | executing command: cat /etc/os-release
[2026-01-11 04:10:10] 2026-01-11 10:09:26,509 | INFO     | cat /etc/os-release:
[2026-01-11 04:10:10] NAME="CentOS Linux"
[2026-01-11 04:10:10] VERSION="7 (Core)"
[2026-01-11 04:10:10] ID="centos"
[2026-01-11 04:10:10] ID_LIKE="rhel fedora"
[2026-01-11 04:10:10] VERSION_ID="7"
[2026-01-11 04:10:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 04:10:10] ANSI_COLOR="0;31"
[2026-01-11 04:10:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 04:10:10] HOME_URL="https://www.centos.org/"
[2026-01-11 04:10:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 04:10:10] 
[2026-01-11 04:10:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 04:10:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 04:10:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 04:10:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 04:10:10] 
[2026-01-11 04:10:10] 2026-01-11 10:09:26,509 | INFO     | ***************************************
[2026-01-11 04:10:10] 2026-01-11 10:09:27,012 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/5
[2026-01-11 04:10:10] 2026-01-11 10:09:27,025 | INFO     | sufficient remaining disk space (1802298720256 B)
[2026-01-11 04:10:10] 2026-01-11 10:09:27,025 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 04:10:10] 2026-01-11 10:09:27,026 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 04:10:10] 2026-01-11 10:09:27,026 | INFO     | update_server=False
[2026-01-11 04:10:10] 2026-01-11 10:09:27,026 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 04:10:10] 2026-01-11 10:09:27,027 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 04:10:10] 2026-01-11 10:09:27,115 | INFO     | all job control threads have been joined
[2026-01-11 04:10:10] 2026-01-11 10:09:27,318 | INFO     | all data control threads have been joined
[2026-01-11 04:10:10] 2026-01-11 10:09:27,884 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:10:10] 2026-01-11 10:09:27,884 | INFO     | aborting loop
[2026-01-11 04:10:10] 2026-01-11 10:09:28,032 | INFO     | [job] retrieve thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:28,120 | INFO     | [job] control thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:28,156 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:28,323 | INFO     | [data] control thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:28,437 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 04:10:10] 2026-01-11 10:09:28,457 | INFO     | all payload control threads have been joined
[2026-01-11 04:10:10] 2026-01-11 10:09:28,813 | INFO     | [data] copytool_in thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:28,889 | INFO     | [job] job monitor thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:28,987 | INFO     | [payload] failed_post thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:29,081 | INFO     | [job] validate thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:29,260 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:29,302 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:29,462 | INFO     | [payload] control thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:29,530 | INFO     | [payload] validate_post thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:29,882 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 04:10:10] 2026-01-11 10:09:30,442 | INFO     | [data] copytool_out thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:30,887 | INFO     | [job] queue monitor thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:31,033 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:37,252 | INFO     | job.realtimelogging is not enabled
[2026-01-11 04:10:10] 2026-01-11 10:09:38,257 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 04:10:10] 2026-01-11 10:09:57,887 | INFO     | PID=1133022 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 04:10:10] 2026-01-11 10:09:57,887 | INFO     | .. there are 2 such processes running
[2026-01-11 04:10:10] 2026-01-11 10:09:57,888 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 04:10:10] 2026-01-11 10:09:57,888 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 04:10:10] 2026-01-11 10:09:57,888 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 04:10:10] 2026-01-11 10:10:05,074 | INFO     | [monitor] cgroup control has ended
[2026-01-11 04:10:10] 2026-01-11 10:10:05,221 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971717273408)>', '<ExcThread(monitor, started 139970887014144)>']
[2026-01-11 04:10:10] 2026-01-11 10:10:05,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 04:10:10] 2026-01-11 10:10:05,929 | INFO     | [monitor] control thread has ended
[2026-01-11 04:10:10] 2026-01-11 10:10:10,246 | INFO     | all workflow threads have been joined
[2026-01-11 04:10:10] 2026-01-11 10:10:10,247 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 04:10:10] 2026-01-11 10:10:10,247 | INFO     | traces error code: 0
[2026-01-11 04:10:10] 2026-01-11 10:10:10,247 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 04:10:10] 2026-01-11 10:10:10,360 [wrapper] ==== pilot stdout END ====
[2026-01-11 04:10:10] 2026-01-11 10:10:10,363 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 04:10:10] 2026-01-11 10:10:10,366 [wrapper] pilotpid: 1133022
[2026-01-11 04:10:10] 2026-01-11 10:10:10,368 [wrapper] Pilot exit status: 0
[2026-01-11 04:10:10] 2026-01-11 10:10:10,383 [wrapper] pandaids: 6963162458
[2026-01-11 04:10:10] 2026-01-11 10:10:10,447 [wrapper] cleanup supervisor_pilot 1213324 1133023
[2026-01-11 04:10:10] 2026-01-11 10:10:10,450 [wrapper] Test setup, not cleaning
[2026-01-11 04:10:10] 2026-01-11 10:10:10,452 [wrapper] apfmon messages muted
[2026-01-11 04:10:10] 2026-01-11 10:10:10,456 [wrapper] ==== wrapper stdout END ====
[2026-01-11 04:10:10] 2026-01-11 10:10:10,461 [wrapper] ==== wrapper stderr END ====
[2026-01-11 04:10:10]  *** Error codes and diagnostics ***
[2026-01-11 04:10:10]     "exeErrorCode": 0,
[2026-01-11 04:10:10]     "exeErrorDiag": "",
[2026-01-11 04:10:10]     "pilotErrorCode": 0,
[2026-01-11 04:10:10]     "pilotErrorDiag": "",
[2026-01-11 04:10:10]  *** Listing of results directory ***
[2026-01-11 04:10:10] total 435556
[2026-01-11 04:10:10] -rw-r--r-- 1 mark mark    579449 Jan  8 18:57 pilot3.tar.gz
[2026-01-11 04:10:10] -rwx------ 1 mark mark     36322 Jan  8 18:58 runpilot2-wrapper.sh
[2026-01-11 04:10:10] -rw-r--r-- 1 mark mark      5112 Jan  8 19:01 queuedata.json
[2026-01-11 04:10:10] -rw-rw-r-- 1 mark mark       100 Jan 11 02:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 04:10:10] -rwxr-xr-x 1 mark mark      7986 Jan 11 02:49 run_atlas
[2026-01-11 04:10:10] -rw-rw-r-- 1 mark mark       105 Jan 11 02:49 job.xml
[2026-01-11 04:10:10] -rw-r--r-- 2 mark mark 225655563 Jan 11 02:49 EVNT.47898824._001299.pool.root.1
[2026-01-11 04:10:10] -rw-r--r-- 2 mark mark     15847 Jan 11 02:49 start_atlas.sh
[2026-01-11 04:10:10] drwxrwx--x 2 mark mark      4096 Jan 11 02:49 shared
[2026-01-11 04:10:10] -rw-r--r-- 2 mark mark    592402 Jan 11 02:49 input.tar.gz
[2026-01-11 04:10:10] -rw-rw-r-- 1 mark mark         0 Jan 11 02:49 boinc_setup_complete
[2026-01-11 04:10:10] -rw-rw-r-- 1 mark mark      9264 Jan 11 02:49 init_data.xml
[2026-01-11 04:10:10] -rw-rw-r-- 1 mark mark         0 Jan 11 02:49 boinc_lockfile
[2026-01-11 04:10:10] -rw-rw-r-- 1 mark mark      2520 Jan 11 02:49 pandaJob.out
[2026-01-11 04:10:10] -rw------- 1 mark mark    989548 Jan 11 02:49 agis_schedconf.cvmfs.json
[2026-01-11 04:10:10] -rw------- 1 mark mark   1516240 Jan 11 02:49 agis_ddmendpoints.agis.ALL.json
[2026-01-11 04:10:10] drwx------ 5 mark mark      4096 Jan 11 02:49 pilot3
[2026-01-11 04:10:10] -rw------- 1 mark mark 214285845 Jan 11 04:08 HITS.47898826._034079.pool.root.1
[2026-01-11 04:10:10] -rw-rw-r-- 1 mark mark       529 Jan 11 04:08 boinc_task_state.xml
[2026-01-11 04:10:10] -rw------- 1 mark mark      1035 Jan 11 04:09 memory_monitor_summary.json
[2026-01-11 04:10:10] -rw------- 1 mark mark    378783 Jan 11 04:09 log.47898826._034079.job.log.tgz.1
[2026-01-11 04:10:10] -rw------- 1 mark mark      7788 Jan 11 04:09 heartbeat.json
[2026-01-11 04:10:10] -rw------- 1 mark mark        95 Jan 11 04:09 pilot_heartbeat.json
[2026-01-11 04:10:10] -rw-rw-r-- 1 mark mark        27 Jan 11 04:10 wrapper_checkpoint.txt
[2026-01-11 04:10:10] -rw------- 1 mark mark      4904 Jan 11 04:10 pilotlog.txt
[2026-01-11 04:10:10] -rw-rw-r-- 1 mark mark      8192 Jan 11 04:10 boinc_mmap_file
[2026-01-11 04:10:10] -rw------- 1 mark mark    700223 Jan 11 04:10 log.47898826._034079.job.log.1
[2026-01-11 04:10:10] -rw------- 1 mark mark       357 Jan 11 04:10 output.list
[2026-01-11 04:10:10] -rw-rw-r-- 1 mark mark       620 Jan 11 04:10 runtime_log
[2026-01-11 04:10:10] -rw------- 1 mark mark   1095680 Jan 11 04:10 result.tar.gz
[2026-01-11 04:10:10] -rw-rw-r-- 1 mark mark      8887 Jan 11 04:10 runtime_log.err
[2026-01-11 04:10:10] -rw------- 1 mark mark       644 Jan 11 04:10 BjqNDmx0Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhhgKDmtydkRo.diag
[2026-01-11 04:10:10] -rw-rw-r-- 1 mark mark     22519 Jan 11 04:10 stderr.txt
[2026-01-11 04:10:10] HITS file was successfully produced:
[2026-01-11 04:10:10] -rw------- 1 mark mark 214285845 Jan 11 04:08 shared/HITS.pool.root.1
[2026-01-11 04:10:10]  *** Contents of shared directory: ***
[2026-01-11 04:10:10] total 431304
[2026-01-11 04:10:10] -rw-r--r-- 2 mark mark 225655563 Jan 11 02:49 ATLAS.root_0
[2026-01-11 04:10:10] -rw-r--r-- 2 mark mark     15847 Jan 11 02:49 start_atlas.sh
[2026-01-11 04:10:10] -rw-r--r-- 2 mark mark    592402 Jan 11 02:49 input.tar.gz
[2026-01-11 04:10:10] -rw------- 1 mark mark 214285845 Jan 11 04:08 HITS.pool.root.1
[2026-01-11 04:10:10] -rw------- 1 mark mark   1095680 Jan 11 04:10 result.tar.gz
04:10:12 (1128974): run_atlas exited; CPU time 51736.025590
04:10:12 (1128974): called boinc_finish(0)

</stderr_txt>
]]>

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