Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:07:51 (2667050): wrapper (7.7.26015): starting
18:07:51 (2667050): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:07:51] Arguments: --nthreads 8
[2026-01-09 18:07:51] Threads: 8
[2026-01-09 18:07:51] Checking for CVMFS
[2026-01-09 18:07:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:07:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:07:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:07:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:07:52] 2.13.3.0 11585 23517 162516 154959 2 386 38860017 40960000 23485 16776704 0 40847113 99.749 25308548 36449 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:07:52] CVMFS is ok
[2026-01-09 18:07:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:07:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:07:52] Further information can be found at the LHC@home message board.
[2026-01-09 18:07:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:07:52] Checking for apptainer binary...
[2026-01-09 18:07:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:07:52] Running /usr/bin/apptainer --version
[2026-01-09 18:07:52] apptainer version 1.4.5-2.el9
[2026-01-09 18:07:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:07:52] c-212-9.aglt2.org
[2026-01-09 18:07:52] apptainer works
[2026-01-09 18:07:52] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:07:52] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:07:52] Starting ATLAS job with PandaID=6963189356
[2026-01-09 18:07:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:48:46]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:48:46] 2026-01-10 02:48:02,583 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 21:48:46] 2026-01-10 02:48:02,611 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3099.9861562499996
[2026-01-09 21:48:46] 2026-01-10 02:48:02,637 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6963189356/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:48:46] 2026-01-10 02:48:02,637 | INFO     | extracted standard info from prmon json
[2026-01-09 21:48:46] 2026-01-10 02:48:02,637 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:48:46] 2026-01-10 02:48:02,638 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:48:46] 2026-01-10 02:48:02,638 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:48:46] 2026-01-10 02:48:02,638 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:48:46] 2026-01-10 02:48:02,641 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:48:46] 2026-01-10 02:48:02,641 | INFO     | sum of square deviations: 3081668905.320936
[2026-01-09 21:48:46] 2026-01-10 02:48:02,642 | INFO     | sum of deviations: 28363428722.24185
[2026-01-09 21:48:46] 2026-01-10 02:48:02,643 | INFO     | mean x: 1768006688.088372
[2026-01-09 21:48:46] 2026-01-10 02:48:02,643 | INFO     | mean y: 2519098.776744186
[2026-01-09 21:48:46] 2026-01-10 02:48:02,643 | INFO     | intersect: -16270069949.143364
[2026-01-09 21:48:46] 2026-01-10 02:48:02,643 | INFO     | chi2: 2.064309548919434
[2026-01-09 21:48:46] 2026-01-10 02:48:02,643 | INFO     | sum of square deviations: 2871633552.7809424
[2026-01-09 21:48:46] 2026-01-10 02:48:02,644 | INFO     | sum of deviations: 27914463723.295227
[2026-01-09 21:48:46] 2026-01-10 02:48:02,645 | INFO     | mean x: 1768006535.5904763
[2026-01-09 21:48:46] 2026-01-10 02:48:02,645 | INFO     | mean y: 2518772.7476190478
[2026-01-09 21:48:46] 2026-01-10 02:48:02,645 | INFO     | intersect: -17183850376.789207
[2026-01-09 21:48:46] 2026-01-10 02:48:02,645 | INFO     | chi2: 2.065745961161461
[2026-01-09 21:48:46] 2026-01-10 02:48:02,645 | INFO     | current chi2=2.065745961161461 (change=-0.06958318062223867 %)
[2026-01-09 21:48:46] 2026-01-10 02:48:02,645 | INFO     | right removable region: 209
[2026-01-09 21:48:46] 2026-01-10 02:48:02,645 | INFO     | sum of square deviations: 2871621962.7809424
[2026-01-09 21:48:46] 2026-01-10 02:48:02,647 | INFO     | sum of deviations: -14408960934.047623
[2026-01-09 21:48:46] 2026-01-10 02:48:02,647 | INFO     | mean x: 1768006840.5904763
[2026-01-09 21:48:46] 2026-01-10 02:48:02,647 | INFO     | mean y: 2549944.476190476
[2026-01-09 21:48:46] 2026-01-10 02:48:02,647 | INFO     | intersect: 8873892282.492872
[2026-01-09 21:48:46] 2026-01-10 02:48:02,647 | INFO     | chi2: 0.2338855155267879
[2026-01-09 21:48:46] 2026-01-10 02:48:02,647 | INFO     | current chi2=0.2338855155267879 (change=88.67003664013396 %)
[2026-01-09 21:48:46] 2026-01-10 02:48:02,647 | INFO     | sum of square deviations: 2671342645.2390423
[2026-01-09 21:48:46] 2026-01-10 02:48:02,648 | INFO     | sum of deviations: -28100238162.317074
[2026-01-09 21:48:46] 2026-01-10 02:48:02,649 | INFO     | mean x: 1768006993.0926828
[2026-01-09 21:48:46] 2026-01-10 02:48:02,649 | INFO     | mean y: 2560339.1219512196
[2026-01-09 21:48:46] 2026-01-10 02:48:02,649 | INFO     | intersect: 18600480627.292538
[2026-01-09 21:48:46] 2026-01-10 02:48:02,649 | INFO     | chi2: 0.047258149379225116
[2026-01-09 21:48:46] 2026-01-10 02:48:02,649 | INFO     | current chi2=0.047258149379225116 (change=79.79432404234863 %)
[2026-01-09 21:48:46] 2026-01-10 02:48:02,649 | INFO     | sum of square deviations: 2480598390.1950107
[2026-01-09 21:48:46] 2026-01-10 02:48:02,650 | INFO     | sum of deviations: -27052768220.304996
[2026-01-09 21:48:46] 2026-01-10 02:48:02,651 | INFO     | mean x: 1768007145.595
[2026-01-09 21:48:46] 2026-01-10 02:48:02,651 | INFO     | mean y: 2559495.095
[2026-01-09 21:48:46] 2026-01-10 02:48:02,651 | INFO     | intersect: 19283990826.61517
[2026-01-09 21:48:46] 2026-01-10 02:48:02,651 | INFO     | chi2: 0.04623755076069406
[2026-01-09 21:48:46] 2026-01-10 02:48:02,651 | INFO     | current chi2=0.04623755076069406 (change=2.1596245979528703 %)
[2026-01-09 21:48:46] 2026-01-10 02:48:02,651 | INFO     | left removable region: 30
[2026-01-09 21:48:46] 2026-01-10 02:48:02,651 | INFO     | sum of square deviations: 1778373282.1899414
[2026-01-09 21:48:46] 2026-01-10 02:48:02,652 | INFO     | sum of deviations: -19151939730.770954
[2026-01-09 21:48:46] 2026-01-10 02:48:02,652 | INFO     | mean x: 1768007420.1005588
[2026-01-09 21:48:46] 2026-01-10 02:48:02,653 | INFO     | mean y: 2553759.709497207
[2026-01-09 21:48:46] 2026-01-10 02:48:02,653 | INFO     | intersect: 19042859803.682777
[2026-01-09 21:48:46] 2026-01-10 02:48:02,653 | INFO     | chi2: 0.043846594185536
[2026-01-09 21:48:46] 2026-01-10 02:48:02,653 | INFO     | current memory leak: -10.77 B/s (using 179 data points, chi2=0.04)
[2026-01-09 21:48:46] 2026-01-10 02:48:02,653 | INFO     | could have reported an average CPU frequency of 3176 MHz (11 samples)
[2026-01-09 21:48:46] 2026-01-10 02:48:02,653 | INFO     | ..............................
[2026-01-09 21:48:46] 2026-01-10 02:48:02,654 | INFO     | . Timing measurements:
[2026-01-09 21:48:46] 2026-01-10 02:48:02,654 | INFO     | . get job = 0 s
[2026-01-09 21:48:46] 2026-01-10 02:48:02,654 | INFO     | . initial setup = 5 s
[2026-01-09 21:48:46] 2026-01-10 02:48:02,654 | INFO     | . payload setup = 18 s
[2026-01-09 21:48:46] 2026-01-10 02:48:02,654 | INFO     | . stage-in = 0 s
[2026-01-09 21:48:46] 2026-01-10 02:48:02,654 | INFO     | . payload execution = 13110 s
[2026-01-09 21:48:46] 2026-01-10 02:48:02,654 | INFO     | . stage-out = 2 s
[2026-01-09 21:48:46] 2026-01-10 02:48:02,654 | INFO     | . log creation = 0 s
[2026-01-09 21:48:46] 2026-01-10 02:48:02,654 | INFO     | ..............................
[2026-01-09 21:48:46] 2026-01-10 02:48:03,114 | INFO     | 
[2026-01-09 21:48:46] 2026-01-10 02:48:03,116 | INFO     | job summary report
[2026-01-09 21:48:46] 2026-01-10 02:48:03,116 | INFO     | --------------------------------------------------
[2026-01-09 21:48:46] 2026-01-10 02:48:03,116 | INFO     | PanDA job id: 6963189356
[2026-01-09 21:48:46] 2026-01-10 02:48:03,116 | INFO     | task id: 47898826
[2026-01-09 21:48:46] 2026-01-10 02:48:03,116 | INFO     | errors: (none)
[2026-01-09 21:48:46] 2026-01-10 02:48:03,116 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:48:46] 2026-01-10 02:48:03,116 | INFO     | pilot state: finished 
[2026-01-09 21:48:46] 2026-01-10 02:48:03,116 | INFO     | transexitcode: 0
[2026-01-09 21:48:46] 2026-01-10 02:48:03,116 | INFO     | exeerrorcode: 0
[2026-01-09 21:48:46] 2026-01-10 02:48:03,116 | INFO     | exeerrordiag: 
[2026-01-09 21:48:46] 2026-01-10 02:48:03,116 | INFO     | exitcode: 0
[2026-01-09 21:48:46] 2026-01-10 02:48:03,117 | INFO     | exitmsg: OK
[2026-01-09 21:48:46] 2026-01-10 02:48:03,117 | INFO     | cpuconsumptiontime: 45235 s
[2026-01-09 21:48:46] 2026-01-10 02:48:03,117 | INFO     | nevents: 400
[2026-01-09 21:48:46] 2026-01-10 02:48:03,117 | INFO     | neventsw: 0
[2026-01-09 21:48:46] 2026-01-10 02:48:03,117 | INFO     | pid: 2681719
[2026-01-09 21:48:46] 2026-01-10 02:48:03,117 | INFO     | pgrp: 2681719
[2026-01-09 21:48:46] 2026-01-10 02:48:03,117 | INFO     | corecount: 8
[2026-01-09 21:48:46] 2026-01-10 02:48:03,117 | INFO     | event service: False
[2026-01-09 21:48:46] 2026-01-10 02:48:03,117 | INFO     | sizes: {0: 2283744, 1: 2283999, 12: 2283999, 22: 2284289, 23: 2284317, 13132: 2314591, 13135: 2323589, 13139: 2323645, 13150: 2323839}
[2026-01-09 21:48:46] 2026-01-10 02:48:03,117 | INFO     | --------------------------------------------------
[2026-01-09 21:48:46] 2026-01-10 02:48:03,117 | INFO     | 
[2026-01-09 21:48:46] 2026-01-10 02:48:03,117 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-09 21:48:46] 2026-01-10 02:48:03,155 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,155 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,156 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,156 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,156 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,156 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,156 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,156 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,156 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,156 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,156 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,156 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,157 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,157 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,157 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,157 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:48:46] 2026-01-10 02:48:03,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,157 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:48:46] 2026-01-10 02:48:03,157 | INFO     | job 6963189356 has completed (purged errors)
[2026-01-09 21:48:46] 2026-01-10 02:48:03,157 | INFO     | overall cleanup function is called
[2026-01-09 21:48:46] 2026-01-10 02:48:04,184 | INFO     | --- collectZombieJob: --- 10, [2681719]
[2026-01-09 21:48:46] 2026-01-10 02:48:04,185 | INFO     | zombie collector waiting for pid 2681719
[2026-01-09 21:48:46] 2026-01-10 02:48:04,185 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:48:46] 2026-01-10 02:48:04,185 | INFO     | collected zombie processes
[2026-01-09 21:48:46] 2026-01-10 02:48:04,185 | INFO     | will attempt to kill all subprocesses of pid=2681719
[2026-01-09 21:48:46] 2026-01-10 02:48:04,595 | INFO     | process IDs to be killed: [2681719] (in reverse order)
[2026-01-09 21:48:46] 2026-01-10 02:48:04,743 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:48:46] 2026-01-10 02:48:04,744 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:48:46] 2026-01-10 02:48:04,758 | INFO     | did not find any defunct processes belonging to 2681719
[2026-01-09 21:48:46] 2026-01-10 02:48:04,770 | INFO     | did not find any defunct processes belonging to 2681719
[2026-01-09 21:48:46] 2026-01-10 02:48:04,770 | INFO     | ready for new job
[2026-01-09 21:48:46] 2026-01-10 02:48:04,771 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:48:46] 2026-01-10 02:48:04,772 | INFO     | ***************************************
[2026-01-09 21:48:46] 2026-01-10 02:48:04,773 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:48:46] 2026-01-10 02:48:04,773 | INFO     | ***************************************
[2026-01-09 21:48:46] 2026-01-10 02:48:04,773 | INFO     | 
[2026-01-09 21:48:46] 2026-01-10 02:48:04,778 | INFO     | architecture information:
[2026-01-09 21:48:46] 2026-01-10 02:48:04,778 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:48:46] 2026-01-10 02:48:04,843 | INFO     | cat /etc/os-release:
[2026-01-09 21:48:46] NAME="CentOS Linux"
[2026-01-09 21:48:46] VERSION="7 (Core)"
[2026-01-09 21:48:46] ID="centos"
[2026-01-09 21:48:46] ID_LIKE="rhel fedora"
[2026-01-09 21:48:46] VERSION_ID="7"
[2026-01-09 21:48:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:48:46] ANSI_COLOR="0;31"
[2026-01-09 21:48:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:48:46] HOME_URL="https://www.centos.org/"
[2026-01-09 21:48:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:48:46] 
[2026-01-09 21:48:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:48:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:48:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:48:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:48:46] 
[2026-01-09 21:48:46] 2026-01-10 02:48:04,844 | INFO     | ***************************************
[2026-01-09 21:48:46] 2026-01-10 02:48:05,352 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-09 21:48:46] 2026-01-10 02:48:05,372 | INFO     | sufficient remaining disk space (125407592448 B)
[2026-01-09 21:48:46] 2026-01-10 02:48:05,372 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:48:46] 2026-01-10 02:48:05,372 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:48:46] 2026-01-10 02:48:05,373 | INFO     | update_server=False
[2026-01-09 21:48:46] 2026-01-10 02:48:05,373 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:48:46] 2026-01-10 02:48:05,406 | INFO     | all data control threads have been joined
[2026-01-09 21:48:46] 2026-01-10 02:48:05,432 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 21:48:46] 2026-01-10 02:48:05,432 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 21:48:46] 2026-01-10 02:48:05,433 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:48:46] 2026-01-10 02:48:05,433 | INFO     | will abort loop
[2026-01-09 21:48:46] 2026-01-10 02:48:05,698 | INFO     | all job control threads have been joined
[2026-01-09 21:48:46] 2026-01-10 02:48:06,234 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:48:46] 2026-01-10 02:48:06,264 | INFO     | all payload control threads have been joined
[2026-01-09 21:48:46] 2026-01-10 02:48:06,351 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:48:46] 2026-01-10 02:48:06,379 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:06,386 | INFO     | [job] validate thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:06,412 | INFO     | [data] control thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:06,438 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:06,703 | INFO     | [job] control thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:06,804 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:06,833 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:07,086 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:07,137 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:07,270 | INFO     | [payload] control thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:07,289 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:07,449 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:07,497 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:07,745 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:48:46] 2026-01-10 02:48:08,240 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:08,750 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:10,368 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:48:46] 2026-01-10 02:48:35,391 | INFO     | PID=2670787 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:48:46] 2026-01-10 02:48:35,391 | INFO     | .. there are 17 such processes running
[2026-01-09 21:48:46] 2026-01-10 02:48:35,392 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:48:46] 2026-01-10 02:48:35,392 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:48:46] 2026-01-10 02:48:35,392 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:48:46] 2026-01-10 02:48:38,200 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:48:46] 2026-01-10 02:48:40,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139975967205184)>', '<ExcThread(monitor, started 139975551063808)>']
[2026-01-09 21:48:46] 2026-01-10 02:48:40,442 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:48:46] 2026-01-10 02:48:40,443 | INFO     | [monitor] control thread has ended
[2026-01-09 21:48:46] 2026-01-10 02:48:45,155 | INFO     | all workflow threads have been joined
[2026-01-09 21:48:46] 2026-01-10 02:48:45,156 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:48:46] 2026-01-10 02:48:45,156 | INFO     | traces error code: 0
[2026-01-09 21:48:46] 2026-01-10 02:48:45,156 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:48:46] 2026-01-10 02:48:46,035 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:48:46] 2026-01-10 02:48:46,155 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:48:46] 2026-01-10 02:48:46,160 [wrapper] pilotpid: 2670787
[2026-01-09 21:48:46] 2026-01-10 02:48:46,162 [wrapper] Pilot exit status: 0
[2026-01-09 21:48:46] 2026-01-10 02:48:46,194 [wrapper] pandaids: 6963189356
[2026-01-09 21:48:46] 2026-01-10 02:48:46,292 [wrapper] cleanup supervisor_pilot 3070221 2670788
[2026-01-09 21:48:46] 2026-01-10 02:48:46,299 [wrapper] Test setup, not cleaning
[2026-01-09 21:48:46] 2026-01-10 02:48:46,303 [wrapper] apfmon messages muted
[2026-01-09 21:48:46] 2026-01-10 02:48:46,305 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:48:46] 2026-01-10 02:48:46,310 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:48:46]  *** Error codes and diagnostics ***
[2026-01-09 21:48:46]     "exeErrorCode": 0,
[2026-01-09 21:48:46]     "exeErrorDiag": "",
[2026-01-09 21:48:46]     "pilotErrorCode": 0,
[2026-01-09 21:48:46]     "pilotErrorDiag": "",
[2026-01-09 21:48:46]  *** Listing of results directory ***
[2026-01-09 21:48:46] total 445012
[2026-01-09 21:48:46] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-09 21:48:46] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-09 21:48:46] -rwx------. 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-09 21:48:46] -rw-r--r--. 1 boincer umatlas       100 Jan  9 18:07 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:48:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 18:07 run_atlas
[2026-01-09 21:48:46] -rw-r--r--. 1 boincer umatlas       105 Jan  9 18:07 job.xml
[2026-01-09 21:48:46] -rw-r--r--. 2 boincer umatlas 226042927 Jan  9 18:07 EVNT.47898824._001468.pool.root.1
[2026-01-09 21:48:46] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:07 start_atlas.sh
[2026-01-09 21:48:46] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 18:07 shared
[2026-01-09 21:48:46] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 18:07 input.tar.gz
[2026-01-09 21:48:46] -rw-r--r--. 1 boincer umatlas         0 Jan  9 18:07 boinc_lockfile
[2026-01-09 21:48:46] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 18:07 pandaJob.out
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas        57 Jan  9 18:07 setup.sh.local
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas    989375 Jan  9 18:08 agis_schedconf.cvmfs.json
[2026-01-09 21:48:46] drwx------. 5 boincer umatlas      4096 Jan  9 18:08 pilot3
[2026-01-09 21:48:46] -rw-r--r--. 1 boincer umatlas      6955 Jan  9 21:45 init_data.xml
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas 221406677 Jan  9 21:47 HITS.47898826._038238.pool.root.1
[2026-01-09 21:48:46] -rw-r--r--. 1 boincer umatlas       531 Jan  9 21:47 boinc_task_state.xml
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas      1031 Jan  9 21:47 memory_monitor_summary.json
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas   1516240 Jan  9 21:47 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas    442695 Jan  9 21:47 log.47898826._038238.job.log.tgz.1
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas      7772 Jan  9 21:48 heartbeat.json
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas        95 Jan  9 21:48 pilot_heartbeat.json
[2026-01-09 21:48:46] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:48 boinc_mmap_file
[2026-01-09 21:48:46] -rw-r--r--. 1 boincer umatlas        28 Jan  9 21:48 wrapper_checkpoint.txt
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas      5011 Jan  9 21:48 pilotlog.txt
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas   1719566 Jan  9 21:48 log.47898826._038238.job.log.1
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas       357 Jan  9 21:48 output.list
[2026-01-09 21:48:46] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:48 runtime_log
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas   2181120 Jan  9 21:48 result.tar.gz
[2026-01-09 21:48:46] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 21:48 runtime_log.err
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas       655 Jan  9 21:48 KOTMDmECJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6ugKDmGQglzn.diag
[2026-01-09 21:48:46] -rw-r--r--. 1 boincer umatlas     21191 Jan  9 21:48 stderr.txt
[2026-01-09 21:48:46] HITS file was successfully produced:
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas 221406677 Jan  9 21:47 shared/HITS.pool.root.1
[2026-01-09 21:48:46]  *** Contents of shared directory: ***
[2026-01-09 21:48:46] total 439700
[2026-01-09 21:48:46] -rw-r--r--. 2 boincer umatlas 226042927 Jan  9 18:07 ATLAS.root_0
[2026-01-09 21:48:46] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:07 start_atlas.sh
[2026-01-09 21:48:46] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 18:07 input.tar.gz
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas 221406677 Jan  9 21:47 HITS.pool.root.1
[2026-01-09 21:48:46] -rw-------. 1 boincer umatlas   2181120 Jan  9 21:48 result.tar.gz
21:48:47 (2667050): run_atlas exited; CPU time 45686.341362
21:48:47 (2667050): called boinc_finish(0)

</stderr_txt>
]]>

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