Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:22:35 (3885321): wrapper (7.7.26015): starting
14:22:35 (3885321): wrapper: running run_atlas (--nthreads 2)
[2026-01-10 14:22:35] Arguments: --nthreads 2
[2026-01-10 14:22:35] Threads: 2
[2026-01-10 14:22:35] Checking for CVMFS
[2026-01-10 14:22:36] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 14:22:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 14:22:36] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 14:22:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 14:22:36] 2.9.2.0 3288549 2579 59148 154981 2 56 20012362 36864000 0 130560 0 1220536 99.985 94220 2486 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 14:22:36] CVMFS is ok
[2026-01-10 14:22:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 14:22:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 14:22:36] Further information can be found at the LHC@home message board.
[2026-01-10 14:22:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 14:22:36] Checking for apptainer binary...
[2026-01-10 14:22:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 14:22:36] Running /usr/bin/apptainer --version
[2026-01-10 14:22:36] apptainer version 1.4.1-1.1
[2026-01-10 14:22:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 14:22:36] thA369
[2026-01-10 14:22:36] apptainer works
[2026-01-10 14:22:36] Set ATHENA_PROC_NUMBER=2
[2026-01-10 14:22:36] Set ATHENA_CORE_NUMBER=2
[2026-01-10 14:22:36] Starting ATLAS job with PandaID=6963188931
[2026-01-10 14:22:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 17:22:32]  *** The last 200 lines of the pilot log: ***
[2026-01-10 17:22:32] 2026-01-10 16:22:02,443 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 17:22:32] 2026-01-10 16:22:02,444 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:22:32] 2026-01-10 16:22:03,166 | INFO     | all job control threads have been joined
[2026-01-10 17:22:32] 2026-01-10 16:22:03,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 17:22:32] 2026-01-10 16:22:03,214 | INFO     | aborting loop
[2026-01-10 17:22:32] 2026-01-10 16:22:03,351 | INFO     | all data control threads have been joined
[2026-01-10 17:22:32] 2026-01-10 16:22:03,410 | INFO     | all payload control threads have been joined
[2026-01-10 17:22:32] 2026-01-10 16:22:03,414 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 17:22:32] 2026-01-10 16:22:03,448 | INFO     | [job] retrieve thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:03,449 | INFO     | [job] queue monitor thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:03,483 | INFO     | [payload] failed_post thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:04,077 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:04,082 | INFO     | [data] copytool_in thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:04,091 | INFO     | [job] validate thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:04,171 | INFO     | [job] control thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:04,219 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:04,220 | INFO     | [job] job monitor thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:04,318 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:04,356 | INFO     | [data] control thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:04,415 | INFO     | [payload] control thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:04,467 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 17:22:32] 2026-01-10 16:22:04,809 | INFO     | [payload] validate_post thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:05,420 | INFO     | [data] copytool_out thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:06,046 | INFO     | [monitor] cgroup control has ended
[2026-01-10 17:22:32] 2026-01-10 16:22:08,472 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:13,187 | INFO     | job.realtimelogging is not enabled
[2026-01-10 17:22:32] 2026-01-10 16:22:14,192 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 17:22:32] 2026-01-10 16:22:15,170 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140131763418944)>', '<ExcThread(monitor, started 140131260413696)>']
[2026-01-10 17:22:32] 2026-01-10 16:22:20,195 | INFO     | all workflow threads have been joined
[2026-01-10 17:22:32] 2026-01-10 16:22:20,196 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 17:22:32] 2026-01-10 16:22:20,196 | INFO     | traces error code: 0
[2026-01-10 17:22:32] 2026-01-10 16:22:20,197 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 17:22:32] 2026-01-10 16:22:32,684 | INFO     | PID=3889040 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 17:22:32] 2026-01-10 16:22:32,684 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 17:22:32] 2026-01-10 16:22:32,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 17:22:32] 2026-01-10 16:22:32,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 17:22:32] 2026-01-10 16:22:32,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 17:22:32] 2026-01-10 16:22:32,685 | INFO     | [monitor] control thread has ended
[2026-01-10 17:22:32] 2026-01-10 16:22:32,727 [wrapper] ==== pilot stdout END ====
[2026-01-10 17:22:32] 2026-01-10 16:22:32,729 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 17:22:32] 2026-01-10 16:22:32,731 [wrapper] pilotpid: 3889040
[2026-01-10 17:22:32] 2026-01-10 16:22:32,734 [wrapper] Pilot exit status: 0
[2026-01-10 17:22:32] 2026-01-10 16:22:32,739 [wrapper] pandaids: 6963188931
[2026-01-10 17:22:32] 2026-01-10 16:22:32,757 [wrapper] cleanup supervisor_pilot 3921814 3889041
[2026-01-10 17:22:32] 2026-01-10 16:22:32,759 [wrapper] Test setup, not cleaning
[2026-01-10 17:22:32] 2026-01-10 16:22:32,761 [wrapper] apfmon messages muted
[2026-01-10 17:22:32] 2026-01-10 16:22:32,763 [wrapper] ==== wrapper stdout END ====
[2026-01-10 17:22:32] 2026-01-10 16:22:32,765 [wrapper] ==== wrapper stderr END ====
[2026-01-10 17:22:32]  *** Error codes and diagnostics ***
[2026-01-10 17:22:32]     "exeErrorCode": 0,
[2026-01-10 17:22:32]     "exeErrorDiag": "",
[2026-01-10 17:22:32]     "pilotErrorCode": 0,
[2026-01-10 17:22:32]     "pilotErrorDiag": "",
[2026-01-10 17:22:32]  *** Listing of results directory ***
[2026-01-10 17:22:32] total 441800
[2026-01-10 17:22:32] -rw-r--r-- 1 boinc boinc      5112 Jan  9 05:21 queuedata.json
[2026-01-10 17:22:32] -rw-r--r-- 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 17:22:32] -rwx------ 1 boinc boinc     36322 Jan  9 05:22 runpilot2-wrapper.sh
[2026-01-10 17:22:32] -rw-r--r-- 1 boinc boinc       100 Jan 10 14:22 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 17:22:32] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 14:22 run_atlas
[2026-01-10 17:22:32] -rw-r--r-- 1 boinc boinc       105 Jan 10 14:22 job.xml
[2026-01-10 17:22:32] -rw-r--r-- 2 boinc boinc 225271768 Jan 10 14:22 EVNT.47898824._001453.pool.root.1
[2026-01-10 17:22:32] -rw-r--r-- 2 boinc boinc    592400 Jan 10 14:22 input.tar.gz
[2026-01-10 17:22:32] -rw-r--r-- 2 boinc boinc     15847 Jan 10 14:22 start_atlas.sh
[2026-01-10 17:22:32] drwxrwx--x 2 boinc boinc      4096 Jan 10 14:22 shared
[2026-01-10 17:22:32] -rw-r--r-- 1 boinc boinc         0 Jan 10 14:22 boinc_setup_complete
[2026-01-10 17:22:32] -rw-r--r-- 1 boinc boinc      6206 Jan 10 14:22 init_data.xml
[2026-01-10 17:22:32] -rw-r--r-- 1 boinc boinc         0 Jan 10 14:22 boinc_lockfile
[2026-01-10 17:22:32] -rw-r--r-- 1 boinc boinc      2520 Jan 10 14:22 pandaJob.out
[2026-01-10 17:22:32] -rw------- 1 boinc boinc    989556 Jan 10 14:22 agis_schedconf.cvmfs.json
[2026-01-10 17:22:32] -rw------- 1 boinc boinc   1516240 Jan 10 14:22 agis_ddmendpoints.agis.ALL.json
[2026-01-10 17:22:32] drwx------ 5 boinc boinc      4096 Jan 10 14:22 pilot3
[2026-01-10 17:22:32] -rw------- 1 boinc boinc 219547130 Jan 10 17:21 HITS.47898826._037868.pool.root.1
[2026-01-10 17:22:32] -rw-r--r-- 1 boinc boinc       530 Jan 10 17:21 boinc_task_state.xml
[2026-01-10 17:22:32] -rw------- 1 boinc boinc      1017 Jan 10 17:21 memory_monitor_summary.json
[2026-01-10 17:22:32] -rw------- 1 boinc boinc    327732 Jan 10 17:21 log.47898826._037868.job.log.tgz.1
[2026-01-10 17:22:32] -rw------- 1 boinc boinc        95 Jan 10 17:21 pilot_heartbeat.json
[2026-01-10 17:22:32] -rw------- 1 boinc boinc      7759 Jan 10 17:22 heartbeat.json
[2026-01-10 17:22:32] -rw-r--r-- 1 boinc boinc      8192 Jan 10 17:22 boinc_mmap_file
[2026-01-10 17:22:32] -rw-r--r-- 1 boinc boinc        28 Jan 10 17:22 wrapper_checkpoint.txt
[2026-01-10 17:22:32] -rw------- 1 boinc boinc       747 Jan 10 17:22 pilotlog.txt
[2026-01-10 17:22:32] -rw------- 1 boinc boinc   1518819 Jan 10 17:22 log.47898826._037868.job.log.1
[2026-01-10 17:22:32] -rw------- 1 boinc boinc       357 Jan 10 17:22 output.list
[2026-01-10 17:22:32] -rw-r--r-- 1 boinc boinc       620 Jan 10 17:22 runtime_log
[2026-01-10 17:22:32] -rw------- 1 boinc boinc   1863680 Jan 10 17:22 result.tar.gz
[2026-01-10 17:22:32] -rw-r--r-- 1 boinc boinc      8898 Jan 10 17:22 runtime_log.err
[2026-01-10 17:22:32] -rw------- 1 boinc boinc       662 Jan 10 17:22 8WNLDm1BJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmjsgKDmM7TNLo.diag
[2026-01-10 17:22:32] -rw-r--r-- 1 boinc boinc      7429 Jan 10 17:22 stderr.txt
[2026-01-10 17:22:32] HITS file was successfully produced:
[2026-01-10 17:22:32] -rw------- 1 boinc boinc 219547130 Jan 10 17:21 shared/HITS.pool.root.1
[2026-01-10 17:22:32]  *** Contents of shared directory: ***
[2026-01-10 17:22:32] total 436820
[2026-01-10 17:22:32] -rw-r--r-- 2 boinc boinc 225271768 Jan 10 14:22 ATLAS.root_0
[2026-01-10 17:22:32] -rw-r--r-- 2 boinc boinc    592400 Jan 10 14:22 input.tar.gz
[2026-01-10 17:22:32] -rw-r--r-- 2 boinc boinc     15847 Jan 10 14:22 start_atlas.sh
[2026-01-10 17:22:32] -rw------- 1 boinc boinc 219547130 Jan 10 17:21 HITS.pool.root.1
[2026-01-10 17:22:32] -rw------- 1 boinc boinc   1863680 Jan 10 17:22 result.tar.gz
17:22:34 (3885321): run_atlas exited; CPU time 21148.618373
17:22:34 (3885321): called boinc_finish(0)

</stderr_txt>
]]>

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