Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:45:14 (4100765): wrapper (7.7.26015): starting
17:45:14 (4100765): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:45:14] Arguments: --nthreads 8
[2026-01-09 17:45:14] Threads: 8
[2026-01-09 17:45:14] Checking for CVMFS
[2026-01-09 17:45:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:45:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:45:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:45:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:45:16] 2.13.3.0 7069 24159 256508 154959 1 355 28597143 40960001 13059 16776704 0 36811948 99.825 48579003 31799 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 17:45:16] CVMFS is ok
[2026-01-09 17:45:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:45:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:45:16] Further information can be found at the LHC@home message board.
[2026-01-09 17:45:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:45:16] Checking for apptainer binary...
[2026-01-09 17:45:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:45:16] Running /usr/bin/apptainer --version
[2026-01-09 17:45:16] apptainer version 1.4.5-2.el9
[2026-01-09 17:45:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:45:16] c-210-35-3.aglt2.org
[2026-01-09 17:45:16] apptainer works
[2026-01-09 17:45:16] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:45:16] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:45:16] Starting ATLAS job with PandaID=6963188217
[2026-01-09 17:45:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:09:19 (171860): wrapper (7.7.26015): starting
19:09:19 (171860): wrapper: running run_atlas (--nthreads 11)
[2026-01-09 19:09:19] Arguments: --nthreads 11
[2026-01-09 19:09:19] Threads: 11
[2026-01-09 19:09:19] This job has been restarted, cleaning up previous attempt
[2026-01-09 19:09:19] Checking for CVMFS
[2026-01-09 19:09:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:09:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:09:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:09:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:09:20] 2.13.3.0 7069 24243 250240 154961 1 71 32002365 40960001 12003 16776704 0 36964579 99.824 48806136 31799 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 19:09:20] CVMFS is ok
[2026-01-09 19:09:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:09:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:09:20] Further information can be found at the LHC@home message board.
[2026-01-09 19:09:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:09:20] Checking for apptainer binary...
[2026-01-09 19:09:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:09:20] Running /usr/bin/apptainer --version
[2026-01-09 19:09:20] apptainer version 1.4.5-2.el9
[2026-01-09 19:09:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:09:21] c-210-35-3.aglt2.org
[2026-01-09 19:09:21] apptainer works
[2026-01-09 19:09:21] Set ATHENA_PROC_NUMBER=11
[2026-01-09 19:09:21] Set ATHENA_CORE_NUMBER=11
[2026-01-09 19:09:21] Starting ATLAS job with PandaID=6963188217
[2026-01-09 19:09:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 04:53:52]  *** The last 200 lines of the pilot log: ***
[2026-01-10 04:53:52] 2026-01-10 09:53:04,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:53:52] 2026-01-10 09:53:05,367 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 04:53:52] 2026-01-10 09:53:05,370 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2997.176875
[2026-01-10 04:53:52] 2026-01-10 09:53:05,380 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963188217/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 04:53:52] 2026-01-10 09:53:05,381 | INFO     | extracted standard info from prmon json
[2026-01-10 04:53:52] 2026-01-10 09:53:05,381 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 04:53:52] 2026-01-10 09:53:05,381 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 04:53:52] 2026-01-10 09:53:05,381 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 04:53:52] 2026-01-10 09:53:05,381 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 04:53:52] 2026-01-10 09:53:05,391 | INFO     | fitting pss+swap vs Time
[2026-01-10 04:53:52] 2026-01-10 09:53:05,392 | INFO     | sum of square deviations: 58338015746.61082
[2026-01-10 04:53:52] 2026-01-10 09:53:05,398 | INFO     | sum of deviations: 153256740321.96838
[2026-01-10 04:53:52] 2026-01-10 09:53:05,398 | INFO     | mean x: 1768021284.731239
[2026-01-10 04:53:52] 2026-01-10 09:53:05,398 | INFO     | mean y: 2609493.9738219897
[2026-01-10 04:53:52] 2026-01-10 09:53:05,398 | INFO     | intersect: -4642066459.6047
[2026-01-10 04:53:52] 2026-01-10 09:53:05,399 | INFO     | chi2: 4.334501639729276
[2026-01-10 04:53:52] 2026-01-10 09:53:05,399 | INFO     | sum of square deviations: 56824291898.91386
[2026-01-10 04:53:52] 2026-01-10 09:53:05,405 | INFO     | sum of deviations: 266624685121.17108
[2026-01-10 04:53:52] 2026-01-10 09:53:05,406 | INFO     | mean x: 1768021132.2376761
[2026-01-10 04:53:52] 2026-01-10 09:53:05,406 | INFO     | mean y: 2620873.9172535213
[2026-01-10 04:53:52] 2026-01-10 09:53:05,406 | INFO     | intersect: -8293093193.387422
[2026-01-10 04:53:52] 2026-01-10 09:53:05,406 | INFO     | chi2: 2.2031442996586645
[2026-01-10 04:53:52] 2026-01-10 09:53:05,407 | INFO     | current chi2=2.2031442996586645 (change=49.17191218789645 %)
[2026-01-10 04:53:52] 2026-01-10 09:53:05,407 | INFO     | sum of square deviations: 55336987151.16853
[2026-01-10 04:53:52] 2026-01-10 09:53:05,413 | INFO     | sum of deviations: 263484751228.9078
[2026-01-10 04:53:52] 2026-01-10 09:53:05,414 | INFO     | mean x: 1768020979.7442274
[2026-01-10 04:53:52] 2026-01-10 09:53:05,414 | INFO     | mean y: 2620551.971580817
[2026-01-10 04:53:52] 2026-01-10 09:53:05,414 | INFO     | intersect: -8415737439.633687
[2026-01-10 04:53:52] 2026-01-10 09:53:05,414 | INFO     | chi2: 2.2028538849962147
[2026-01-10 04:53:52] 2026-01-10 09:53:05,414 | INFO     | current chi2=2.2028538849962147 (change=0.013181826650883834 %)
[2026-01-10 04:53:52] 2026-01-10 09:53:05,415 | INFO     | right removable region: 562
[2026-01-10 04:53:52] 2026-01-10 09:53:05,415 | INFO     | sum of square deviations: 56824036308.913864
[2026-01-10 04:53:52] 2026-01-10 09:53:05,421 | INFO     | sum of deviations: 32111278860.706093
[2026-01-10 04:53:52] 2026-01-10 09:53:05,421 | INFO     | mean x: 1768021437.2376761
[2026-01-10 04:53:52] 2026-01-10 09:53:05,422 | INFO     | mean y: 2621664.5651408453
[2026-01-10 04:53:52] 2026-01-10 09:53:05,422 | INFO     | intersect: -996487745.6535674
[2026-01-10 04:53:52] 2026-01-10 09:53:05,422 | INFO     | chi2: 2.501519801615647
[2026-01-10 04:53:52] 2026-01-10 09:53:05,422 | INFO     | current chi2=2.501519801615647 (change=42.288179598615024 %)
[2026-01-10 04:53:52] 2026-01-10 09:53:05,423 | INFO     | sum of square deviations: 55336510619.65541
[2026-01-10 04:53:52] 2026-01-10 09:53:05,429 | INFO     | sum of deviations: -7210113875.458282
[2026-01-10 04:53:52] 2026-01-10 09:53:05,429 | INFO     | mean x: 1768021589.7424512
[2026-01-10 04:53:52] 2026-01-10 09:53:05,429 | INFO     | mean y: 2625693.245115453
[2026-01-10 04:53:52] 2026-01-10 09:53:05,429 | INFO     | intersect: 232991447.3117249
[2026-01-10 04:53:52] 2026-01-10 09:53:05,430 | INFO     | chi2: 2.3567303948381904
[2026-01-10 04:53:52] 2026-01-10 09:53:05,430 | INFO     | current chi2=2.3567303948381904 (change=5.788057591386719 %)
[2026-01-10 04:53:52] 2026-01-10 09:53:05,430 | INFO     | left removable region: 20
[2026-01-10 04:53:52] 2026-01-10 09:53:05,431 | INFO     | sum of square deviations: 49372567906.20823
[2026-01-10 04:53:52] 2026-01-10 09:53:05,437 | INFO     | sum of deviations: 43376461084.77308
[2026-01-10 04:53:52] 2026-01-10 09:53:05,437 | INFO     | mean x: 1768021559.2675276
[2026-01-10 04:53:52] 2026-01-10 09:53:05,437 | INFO     | mean y: 2643785.6291512917
[2026-01-10 04:53:52] 2026-01-10 09:53:05,437 | INFO     | intersect: -1550658414.6593711
[2026-01-10 04:53:52] 2026-01-10 09:53:05,438 | INFO     | chi2: 0.011285005022689747
[2026-01-10 04:53:52] 2026-01-10 09:53:05,438 | INFO     | current memory leak: 0.88 B/s (using 542 data points, chi2=0.01)
[2026-01-10 04:53:52] 2026-01-10 09:53:05,439 | INFO     | could have reported an average CPU frequency of 2948 MHz (23 samples)
[2026-01-10 04:53:52] 2026-01-10 09:53:05,439 | INFO     | ..............................
[2026-01-10 04:53:52] 2026-01-10 09:53:05,439 | INFO     | . Timing measurements:
[2026-01-10 04:53:52] 2026-01-10 09:53:05,439 | INFO     | . get job = 0 s
[2026-01-10 04:53:52] 2026-01-10 09:53:05,439 | INFO     | . initial setup = 1 s
[2026-01-10 04:53:52] 2026-01-10 09:53:05,440 | INFO     | . payload setup = 14 s
[2026-01-10 04:53:52] 2026-01-10 09:53:05,440 | INFO     | . stage-in = 0 s
[2026-01-10 04:53:52] 2026-01-10 09:53:05,440 | INFO     | . payload execution = 34945 s
[2026-01-10 04:53:52] 2026-01-10 09:53:05,440 | INFO     | . stage-out = 3 s
[2026-01-10 04:53:52] 2026-01-10 09:53:05,440 | INFO     | . log creation = 0 s
[2026-01-10 04:53:52] 2026-01-10 09:53:05,440 | INFO     | ..............................
[2026-01-10 04:53:52] 2026-01-10 09:53:05,634 | INFO     | 
[2026-01-10 04:53:52] 2026-01-10 09:53:05,634 | INFO     | job summary report
[2026-01-10 04:53:52] 2026-01-10 09:53:05,634 | INFO     | --------------------------------------------------
[2026-01-10 04:53:52] 2026-01-10 09:53:05,634 | INFO     | PanDA job id: 6963188217
[2026-01-10 04:53:52] 2026-01-10 09:53:05,634 | INFO     | task id: 47898826
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | errors: (none)
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | pilot state: finished 
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | transexitcode: 0
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | exeerrorcode: 0
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | exeerrordiag: 
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | exitcode: 0
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | exitmsg: OK
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | cpuconsumptiontime: 59104 s
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | nevents: 400
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | neventsw: 0
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | pid: 203793
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | pgrp: 203793
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | corecount: 11
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | event service: False
[2026-01-10 04:53:52] 2026-01-10 09:53:05,635 | INFO     | sizes: {0: 2283143, 1: 2283999, 11: 2284261, 12: 2284289, 34963: 2324753, 34967: 2333751, 34970: 2333935, 34977: 2334129}
[2026-01-10 04:53:52] 2026-01-10 09:53:05,636 | INFO     | --------------------------------------------------
[2026-01-10 04:53:52] 2026-01-10 09:53:05,636 | INFO     | 
[2026-01-10 04:53:52] 2026-01-10 09:53:05,636 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 04:53:52] 2026-01-10 09:53:05,656 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,657 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,657 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,657 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,657 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,657 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,657 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,657 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,657 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,657 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,658 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,658 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,658 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,658 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,658 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,658 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,658 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,658 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 04:53:52] 2026-01-10 09:53:05,658 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,658 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 04:53:52] 2026-01-10 09:53:05,659 | INFO     | job 6963188217 has completed (purged errors)
[2026-01-10 04:53:52] 2026-01-10 09:53:05,659 | INFO     | overall cleanup function is called
[2026-01-10 04:53:52] 2026-01-10 09:53:06,668 | INFO     | --- collectZombieJob: --- 10, [203793]
[2026-01-10 04:53:52] 2026-01-10 09:53:06,668 | INFO     | zombie collector waiting for pid 203793
[2026-01-10 04:53:52] 2026-01-10 09:53:06,672 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 04:53:52] 2026-01-10 09:53:06,672 | INFO     | collected zombie processes
[2026-01-10 04:53:52] 2026-01-10 09:53:06,672 | INFO     | will attempt to kill all subprocesses of pid=203793
[2026-01-10 04:53:52] 2026-01-10 09:53:07,125 | INFO     | process IDs to be killed: [203793] (in reverse order)
[2026-01-10 04:53:52] 2026-01-10 09:53:07,235 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 04:53:52] 2026-01-10 09:53:07,235 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 04:53:52] 2026-01-10 09:53:07,247 | INFO     | did not find any defunct processes belonging to 203793
[2026-01-10 04:53:52] 2026-01-10 09:53:07,258 | INFO     | did not find any defunct processes belonging to 203793
[2026-01-10 04:53:52] 2026-01-10 09:53:07,259 | INFO     | ready for new job
[2026-01-10 04:53:52] 2026-01-10 09:53:07,259 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 04:53:52] 2026-01-10 09:53:07,262 | INFO     | ***************************************
[2026-01-10 04:53:52] 2026-01-10 09:53:07,262 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 04:53:52] 2026-01-10 09:53:07,263 | INFO     | ***************************************
[2026-01-10 04:53:52] 2026-01-10 09:53:07,263 | INFO     | 
[2026-01-10 04:53:52] 2026-01-10 09:53:07,266 | INFO     | architecture information:
[2026-01-10 04:53:52] 2026-01-10 09:53:07,266 | INFO     | executing command: cat /etc/os-release
[2026-01-10 04:53:52] 2026-01-10 09:53:07,286 | INFO     | cat /etc/os-release:
[2026-01-10 04:53:52] NAME="CentOS Linux"
[2026-01-10 04:53:52] VERSION="7 (Core)"
[2026-01-10 04:53:52] ID="centos"
[2026-01-10 04:53:52] ID_LIKE="rhel fedora"
[2026-01-10 04:53:52] VERSION_ID="7"
[2026-01-10 04:53:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 04:53:52] ANSI_COLOR="0;31"
[2026-01-10 04:53:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 04:53:52] HOME_URL="https://www.centos.org/"
[2026-01-10 04:53:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 04:53:52] 
[2026-01-10 04:53:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 04:53:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 04:53:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 04:53:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 04:53:52] 
[2026-01-10 04:53:52] 2026-01-10 09:53:07,286 | INFO     | ***************************************
[2026-01-10 04:53:52] 2026-01-10 09:53:07,790 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 04:53:52] 2026-01-10 09:53:07,811 | INFO     | sufficient remaining disk space (73165438976 B)
[2026-01-10 04:53:52] 2026-01-10 09:53:07,812 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 04:53:52] 2026-01-10 09:53:07,812 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 04:53:52] 2026-01-10 09:53:07,812 | INFO     | update_server=False
[2026-01-10 04:53:52] 2026-01-10 09:53:07,812 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 04:53:52] 2026-01-10 09:53:08,421 | INFO     | all data control threads have been joined
[2026-01-10 04:53:52] 2026-01-10 09:53:08,503 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:53:52] 2026-01-10 09:53:08,503 | INFO     | aborting loop
[2026-01-10 04:53:52] 2026-01-10 09:53:08,535 | INFO     | all payload control threads have been joined
[2026-01-10 04:53:52] 2026-01-10 09:53:08,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 04:53:52] 2026-01-10 09:53:08,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 04:53:52] 2026-01-10 09:53:08,818 | INFO     | [job] retrieve thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:08,933 | INFO     | [data] copytool_in thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:09,077 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:09,177 | INFO     | all job control threads have been joined
[2026-01-10 04:53:52] 2026-01-10 09:53:09,358 | INFO     | [payload] validate_post thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:09,398 | INFO     | [payload] failed_post thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:09,427 | INFO     | [data] control thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:09,435 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:09,509 | INFO     | [job] job monitor thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:09,546 | INFO     | [payload] control thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:10,132 | INFO     | [job] validate thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:10,183 | INFO     | [job] control thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:10,306 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:10,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:53:52] 2026-01-10 09:53:10,667 | INFO     | [data] copytool_out thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:11,663 | INFO     | [job] queue monitor thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:12,651 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:18,095 | INFO     | job.realtimelogging is not enabled
[2026-01-10 04:53:52] 2026-01-10 09:53:19,120 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 04:53:52] 2026-01-10 09:53:37,630 | INFO     | PID=182103 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 04:53:52] 2026-01-10 09:53:37,630 | INFO     | .. there are 16 such processes running
[2026-01-10 04:53:52] 2026-01-10 09:53:37,631 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 04:53:52] 2026-01-10 09:53:37,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 04:53:52] 2026-01-10 09:53:37,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 04:53:52] 2026-01-10 09:53:45,101 | INFO     | [monitor] cgroup control has ended
[2026-01-10 04:53:52] 2026-01-10 09:53:47,159 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140715928389440)>', '<ExcThread(monitor, started 140715585685248)>']
[2026-01-10 04:53:52] 2026-01-10 09:53:47,709 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 04:53:52] 2026-01-10 09:53:47,709 | INFO     | [monitor] control thread has ended
[2026-01-10 04:53:52] 2026-01-10 09:53:52,184 | INFO     | all workflow threads have been joined
[2026-01-10 04:53:52] 2026-01-10 09:53:52,185 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 04:53:52] 2026-01-10 09:53:52,185 | INFO     | traces error code: 0
[2026-01-10 04:53:52] 2026-01-10 09:53:52,185 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 04:53:52] 2026-01-10 09:53:52,351 [wrapper] ==== pilot stdout END ====
[2026-01-10 04:53:52] 2026-01-10 09:53:52,354 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 04:53:52] 2026-01-10 09:53:52,357 [wrapper] pilotpid: 182103
[2026-01-10 04:53:52] 2026-01-10 09:53:52,360 [wrapper] Pilot exit status: 0
[2026-01-10 04:53:52] 2026-01-10 09:53:52,393 [wrapper] pandaids: 6963188217 6963188217
[2026-01-10 04:53:52] 2026-01-10 09:53:52,464 [wrapper] cleanup supervisor_pilot 1670136 182104
[2026-01-10 04:53:52] 2026-01-10 09:53:52,467 [wrapper] Test setup, not cleaning
[2026-01-10 04:53:52] 2026-01-10 09:53:52,470 [wrapper] apfmon messages muted
[2026-01-10 04:53:52] 2026-01-10 09:53:52,473 [wrapper] ==== wrapper stdout END ====
[2026-01-10 04:53:52] 2026-01-10 09:53:52,476 [wrapper] ==== wrapper stderr END ====
[2026-01-10 04:53:52]  *** Error codes and diagnostics ***
[2026-01-10 04:53:52]     "exeErrorCode": 0,
[2026-01-10 04:53:52]     "exeErrorDiag": "",
[2026-01-10 04:53:52]     "pilotErrorCode": 0,
[2026-01-10 04:53:52]     "pilotErrorDiag": "",
[2026-01-10 04:53:52]  *** Listing of results directory ***
[2026-01-10 04:53:52] total 669020
[2026-01-10 04:53:52] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-10 04:53:52] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 23:21 queuedata.json
[2026-01-10 04:53:52] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 23:21 pilot3.tar.gz
[2026-01-10 04:53:52] -rwx------. 1 boincer umatlas     36322 Jan  8 23:22 runpilot2-wrapper.sh
[2026-01-10 04:53:52] -rw-r--r--. 1 boincer umatlas       100 Jan  9 17:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 04:53:52] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 17:45 run_atlas
[2026-01-10 04:53:52] -rw-r--r--. 1 boincer umatlas       105 Jan  9 17:45 job.xml
[2026-01-10 04:53:52] -rw-r--r--. 3 boincer umatlas 224983752 Jan  9 17:45 EVNT.47898824._001433.pool.root.1
[2026-01-10 04:53:52] -rw-r--r--. 3 boincer umatlas 224983752 Jan  9 17:45 ATLAS.root_0
[2026-01-10 04:53:52] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:45 start_atlas.sh
[2026-01-10 04:53:52] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 17:45 shared
[2026-01-10 04:53:52] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 17:45 input.tar.gz
[2026-01-10 04:53:52] -rw-r--r--. 1 boincer umatlas         0 Jan  9 17:45 boinc_lockfile
[2026-01-10 04:53:52] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 19:09 pandaJob.out
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas        57 Jan  9 19:09 setup.sh.local
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas    989374 Jan  9 19:09 agis_schedconf.cvmfs.json
[2026-01-10 04:53:52] -rw-r--r--. 1 boincer umatlas      6842 Jan 10 04:48 init_data.xml
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas 220376723 Jan 10 04:49 HITS.47898826._037369.pool.root.1
[2026-01-10 04:53:52] -rw-r--r--. 1 boincer umatlas       530 Jan 10 04:49 boinc_task_state.xml
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas      1054 Jan 10 04:52 memory_monitor_summary.json
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas   1516240 Jan 10 04:52 agis_ddmendpoints.agis.ALL.json
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas    799694 Jan 10 04:52 log.47898826._037369.job.log.tgz.1
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas      7852 Jan 10 04:53 heartbeat.json
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas        96 Jan 10 04:53 pilot_heartbeat.json
[2026-01-10 04:53:52] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 04:53 boinc_mmap_file
[2026-01-10 04:53:52] -rw-r--r--. 1 boincer umatlas        28 Jan 10 04:53 wrapper_checkpoint.txt
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas      4895 Jan 10 04:53 pilotlog.txt
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas   4610388 Jan 10 04:53 log.47898826._037369.job.log.1
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas       357 Jan 10 04:53 output.list
[2026-01-10 04:53:52] -rw-r--r--. 1 boincer umatlas       620 Jan 10 04:53 runtime_log
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas   5427200 Jan 10 04:53 result.tar.gz
[2026-01-10 04:53:52] -rw-r--r--. 1 boincer umatlas      9440 Jan 10 04:53 runtime_log.err
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas       789 Jan 10 04:53 03dNDmnBJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmV5lKDmiygUKn.diag
[2026-01-10 04:53:52] -rw-r--r--. 1 boincer umatlas     23330 Jan 10 04:53 stderr.txt
[2026-01-10 04:53:52] HITS file was successfully produced:
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas 220376723 Jan 10 04:49 shared/HITS.pool.root.1
[2026-01-10 04:53:52]  *** Contents of shared directory: ***
[2026-01-10 04:53:52] total 440824
[2026-01-10 04:53:52] -rw-r--r--. 3 boincer umatlas 224983752 Jan  9 17:45 ATLAS.root_0
[2026-01-10 04:53:52] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 17:45 start_atlas.sh
[2026-01-10 04:53:52] -rw-r--r--. 2 boincer umatlas    592398 Jan  9 17:45 input.tar.gz
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas 220376723 Jan 10 04:49 HITS.pool.root.1
[2026-01-10 04:53:52] -rw-------. 1 boincer umatlas   5427200 Jan 10 04:53 result.tar.gz
04:53:54 (171860): run_atlas exited; CPU time 60088.820078
04:53:54 (171860): called boinc_finish(0)

</stderr_txt>
]]>

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