Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:00:14 (2539726): wrapper (7.7.26015): starting
19:00:14 (2539726): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:00:14] Arguments: --nthreads 8
[2026-01-09 19:00:14] Threads: 8
[2026-01-09 19:00:14] Checking for CVMFS
[2026-01-09 19:00:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:00:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:00:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:00:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:00:16] 2.13.3.0 12460 94101 227868 154961 2 586 23426892 32935937 24559 16776704 0 911075951 99.639 876488830 36089 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 19:00:16] CVMFS is ok
[2026-01-09 19:00:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:00:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:00:16] Further information can be found at the LHC@home message board.
[2026-01-09 19:00:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:00:16] Checking for apptainer binary...
[2026-01-09 19:00:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:00:16] Running /usr/bin/apptainer --version
[2026-01-09 19:00:16] apptainer version 1.4.5-2.el9
[2026-01-09 19:00:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:00:16] c7-6-31.aglt2.org
[2026-01-09 19:00:16] apptainer works
[2026-01-09 19:00:16] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:00:16] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:00:16] Starting ATLAS job with PandaID=6963165508
[2026-01-09 19:00:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:57:37]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:57:37] 2026-01-10 04:57:02,754 | INFO     | sum of square deviations: 7253950155.150336
[2026-01-09 23:57:37] 2026-01-10 04:57:02,755 | INFO     | sum of deviations: 91071079028.2098
[2026-01-09 23:57:37] 2026-01-10 04:57:02,755 | INFO     | mean x: 1768011965.534965
[2026-01-09 23:57:37] 2026-01-10 04:57:02,755 | INFO     | mean y: 2506536.979020979
[2026-01-09 23:57:37] 2026-01-10 04:57:02,755 | INFO     | intersect: -22194331598.41045
[2026-01-09 23:57:37] 2026-01-10 04:57:02,756 | INFO     | chi2: 2.2990248895325696
[2026-01-09 23:57:37] 2026-01-10 04:57:02,756 | INFO     | current chi2=2.2990248895325696 (change=-0.03771228445768318 %)
[2026-01-09 23:57:37] 2026-01-10 04:57:02,756 | INFO     | right removable region: 285
[2026-01-09 23:57:37] 2026-01-10 04:57:02,756 | INFO     | sum of square deviations: 7253944055.150336
[2026-01-09 23:57:37] 2026-01-10 04:57:02,758 | INFO     | sum of deviations: 27053605339.76573
[2026-01-09 23:57:37] 2026-01-10 04:57:02,758 | INFO     | mean x: 1768012270.534965
[2026-01-09 23:57:37] 2026-01-10 04:57:02,758 | INFO     | mean y: 2533586.0734265735
[2026-01-09 23:57:37] 2026-01-10 04:57:02,758 | INFO     | monitor loop #1181: job 0:6963165508 is in state 'finished'
[2026-01-09 23:57:37] 2026-01-10 04:57:02,758 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:57:37] 2026-01-10 04:57:02,758 | INFO     | intersect: -6591273291.849177
[2026-01-09 23:57:37] 2026-01-10 04:57:02,759 | INFO     | chi2: 0.10392029324239545
[2026-01-09 23:57:37] 2026-01-10 04:57:02,759 | INFO     | current chi2=0.10392029324239545 (change=95.47810532924989 %)
[2026-01-09 23:57:37] 2026-01-10 04:57:02,759 | INFO     | sum of square deviations: 6880101437.644126
[2026-01-09 23:57:37] 2026-01-10 04:57:02,761 | INFO     | sum of deviations: 18770027191.341637
[2026-01-09 23:57:37] 2026-01-10 04:57:02,761 | INFO     | mean x: 1768012423.035587
[2026-01-09 23:57:37] 2026-01-10 04:57:02,761 | INFO     | mean y: 2536938.5658362987
[2026-01-09 23:57:37] 2026-01-10 04:57:02,761 | INFO     | intersect: -4820886314.096434
[2026-01-09 23:57:37] 2026-01-10 04:57:02,761 | INFO     | chi2: 0.06117816983926076
[2026-01-09 23:57:37] 2026-01-10 04:57:02,761 | INFO     | current chi2=0.06117816983926076 (change=41.12971785350732 %)
[2026-01-09 23:57:37] 2026-01-10 04:57:02,762 | INFO     | sum of square deviations: 6519328832.637695
[2026-01-09 23:57:37] 2026-01-10 04:57:02,763 | INFO     | sum of deviations: 26742085575.188404
[2026-01-09 23:57:37] 2026-01-10 04:57:02,763 | INFO     | mean x: 1768012575.536232
[2026-01-09 23:57:37] 2026-01-10 04:57:02,763 | INFO     | mean y: 2533588.4311594204
[2026-01-09 23:57:37] 2026-01-10 04:57:02,763 | INFO     | intersect: -7249799405.77213
[2026-01-09 23:57:37] 2026-01-10 04:57:02,764 | INFO     | chi2: 0.006954353603618473
[2026-01-09 23:57:37] 2026-01-10 04:57:02,764 | INFO     | current chi2=0.006954353603618473 (change=88.63262235223723 %)
[2026-01-09 23:57:37] 2026-01-10 04:57:02,764 | INFO     | sum of square deviations: 6171393677.631036
[2026-01-09 23:57:37] 2026-01-10 04:57:02,765 | INFO     | sum of deviations: 23299215272.804436
[2026-01-09 23:57:37] 2026-01-10 04:57:02,766 | INFO     | mean x: 1768012728.0369003
[2026-01-09 23:57:37] 2026-01-10 04:57:02,766 | INFO     | mean y: 2535096.7195571954
[2026-01-09 23:57:37] 2026-01-10 04:57:02,766 | INFO     | intersect: -6672344404.956074
[2026-01-09 23:57:37] 2026-01-10 04:57:02,766 | INFO     | chi2: 0.0049628935091285175
[2026-01-09 23:57:37] 2026-01-10 04:57:02,766 | INFO     | current chi2=0.0049628935091285175 (change=28.63616387659327 %)
[2026-01-09 23:57:37] 2026-01-10 04:57:02,766 | INFO     | sum of square deviations: 5836063410.124023
[2026-01-09 23:57:37] 2026-01-10 04:57:02,768 | INFO     | sum of deviations: 20508017807.04887
[2026-01-09 23:57:37] 2026-01-10 04:57:02,768 | INFO     | mean x: 1768012880.537594
[2026-01-09 23:57:37] 2026-01-10 04:57:02,768 | INFO     | mean y: 2536365.545112782
[2026-01-09 23:57:37] 2026-01-10 04:57:02,768 | INFO     | intersect: -6210288459.877099
[2026-01-09 23:57:37] 2026-01-10 04:57:02,768 | INFO     | chi2: 0.0037843529623650613
[2026-01-09 23:57:37] 2026-01-10 04:57:02,768 | INFO     | current chi2=0.0037843529623650613 (change=23.747044835753638 %)
[2026-01-09 23:57:37] 2026-01-10 04:57:02,768 | INFO     | left removable region: 50
[2026-01-09 23:57:37] 2026-01-10 04:57:02,768 | INFO     | sum of square deviations: 4024175987.574455
[2026-01-09 23:57:37] 2026-01-10 04:57:02,769 | INFO     | sum of deviations: 11881336699.468086
[2026-01-09 23:57:37] 2026-01-10 04:57:02,769 | INFO     | mean x: 1768013460.0425532
[2026-01-09 23:57:37] 2026-01-10 04:57:02,770 | INFO     | mean y: 2539575.7531914893
[2026-01-09 23:57:37] 2026-01-10 04:57:02,770 | INFO     | intersect: -5217501315.305995
[2026-01-09 23:57:37] 2026-01-10 04:57:02,770 | INFO     | chi2: 0.001964140162469541
[2026-01-09 23:57:37] 2026-01-10 04:57:02,770 | INFO     | current memory leak: 2.95 B/s (using 235 data points, chi2=0.00)
[2026-01-09 23:57:37] 2026-01-10 04:57:02,770 | INFO     | could have reported an average CPU frequency of 3291 MHz (13 samples)
[2026-01-09 23:57:37] 2026-01-10 04:57:02,771 | INFO     | ..............................
[2026-01-09 23:57:37] 2026-01-10 04:57:02,771 | INFO     | . Timing measurements:
[2026-01-09 23:57:37] 2026-01-10 04:57:02,771 | INFO     | . get job = 0 s
[2026-01-09 23:57:37] 2026-01-10 04:57:02,771 | INFO     | . initial setup = 3 s
[2026-01-09 23:57:37] 2026-01-10 04:57:02,771 | INFO     | . payload setup = 11 s
[2026-01-09 23:57:37] 2026-01-10 04:57:02,771 | INFO     | . stage-in = 0 s
[2026-01-09 23:57:37] 2026-01-10 04:57:02,771 | INFO     | . payload execution = 17741 s
[2026-01-09 23:57:37] 2026-01-10 04:57:02,771 | INFO     | . stage-out = 2 s
[2026-01-09 23:57:37] 2026-01-10 04:57:02,771 | INFO     | . log creation = 0 s
[2026-01-09 23:57:37] 2026-01-10 04:57:02,771 | INFO     | ..............................
[2026-01-09 23:57:37] 2026-01-10 04:57:03,239 | INFO     | time since job start (17787s) is within the limit (349056.0s)
[2026-01-09 23:57:37] 2026-01-10 04:57:03,288 | INFO     | 
[2026-01-09 23:57:37] 2026-01-10 04:57:03,288 | INFO     | job summary report
[2026-01-09 23:57:37] 2026-01-10 04:57:03,288 | INFO     | --------------------------------------------------
[2026-01-09 23:57:37] 2026-01-10 04:57:03,288 | INFO     | PanDA job id: 6963165508
[2026-01-09 23:57:37] 2026-01-10 04:57:03,288 | INFO     | task id: 47898826
[2026-01-09 23:57:37] 2026-01-10 04:57:03,288 | INFO     | errors: (none)
[2026-01-09 23:57:37] 2026-01-10 04:57:03,288 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | pilot state: finished 
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | transexitcode: 0
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | exeerrorcode: 0
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | exeerrordiag: 
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | exitcode: 0
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | exitmsg: OK
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | cpuconsumptiontime: 45964 s
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | nevents: 400
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | neventsw: 0
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | pid: 2559751
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | pgrp: 2559751
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | corecount: 8
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | event service: False
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | sizes: {0: 2283971, 8: 2284233, 11: 2284261, 17756: 2316504, 17757: 2316503, 17759: 2325557, 17760: 2325741, 17768: 2325935}
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | --------------------------------------------------
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | 
[2026-01-09 23:57:37] 2026-01-10 04:57:03,289 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-09 23:57:37] 2026-01-10 04:57:03,308 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,308 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,308 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,308 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,309 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:57:37] 2026-01-10 04:57:03,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,309 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:57:37] 2026-01-10 04:57:03,309 | INFO     | job 6963165508 has completed (purged errors)
[2026-01-09 23:57:37] 2026-01-10 04:57:03,309 | INFO     | overall cleanup function is called
[2026-01-09 23:57:37] 2026-01-10 04:57:04,318 | INFO     | --- collectZombieJob: --- 10, [2559751]
[2026-01-09 23:57:37] 2026-01-10 04:57:04,318 | INFO     | zombie collector waiting for pid 2559751
[2026-01-09 23:57:37] 2026-01-10 04:57:04,318 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:57:37] 2026-01-10 04:57:04,319 | INFO     | collected zombie processes
[2026-01-09 23:57:37] 2026-01-10 04:57:04,319 | INFO     | will attempt to kill all subprocesses of pid=2559751
[2026-01-09 23:57:37] 2026-01-10 04:57:04,806 | INFO     | process IDs to be killed: [2559751] (in reverse order)
[2026-01-09 23:57:37] 2026-01-10 04:57:04,938 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:57:37] 2026-01-10 04:57:04,939 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:57:37] 2026-01-10 04:57:04,958 | INFO     | did not find any defunct processes belonging to 2559751
[2026-01-09 23:57:37] 2026-01-10 04:57:04,975 | INFO     | did not find any defunct processes belonging to 2559751
[2026-01-09 23:57:37] 2026-01-10 04:57:04,976 | INFO     | ready for new job
[2026-01-09 23:57:37] 2026-01-10 04:57:04,976 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:57:37] 2026-01-10 04:57:04,978 | INFO     | ***************************************
[2026-01-09 23:57:37] 2026-01-10 04:57:04,978 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:57:37] 2026-01-10 04:57:04,978 | INFO     | ***************************************
[2026-01-09 23:57:37] 2026-01-10 04:57:04,978 | INFO     | 
[2026-01-09 23:57:37] 2026-01-10 04:57:04,983 | INFO     | architecture information:
[2026-01-09 23:57:37] 2026-01-10 04:57:04,983 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:57:37] 2026-01-10 04:57:05,031 | INFO     | cat /etc/os-release:
[2026-01-09 23:57:37] NAME="CentOS Linux"
[2026-01-09 23:57:37] VERSION="7 (Core)"
[2026-01-09 23:57:37] ID="centos"
[2026-01-09 23:57:37] ID_LIKE="rhel fedora"
[2026-01-09 23:57:37] VERSION_ID="7"
[2026-01-09 23:57:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:57:37] ANSI_COLOR="0;31"
[2026-01-09 23:57:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:57:37] HOME_URL="https://www.centos.org/"
[2026-01-09 23:57:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:57:37] 
[2026-01-09 23:57:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:57:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:57:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:57:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:57:37] 
[2026-01-09 23:57:37] 2026-01-10 04:57:05,032 | INFO     | ***************************************
[2026-01-09 23:57:37] 2026-01-10 04:57:05,537 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-09 23:57:37] 2026-01-10 04:57:05,568 | INFO     | sufficient remaining disk space (73490497536 B)
[2026-01-09 23:57:37] 2026-01-10 04:57:05,568 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:57:37] 2026-01-10 04:57:05,568 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:57:37] 2026-01-10 04:57:05,568 | INFO     | update_server=False
[2026-01-09 23:57:37] 2026-01-10 04:57:05,568 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:57:37] 2026-01-10 04:57:05,568 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:57:37] 2026-01-10 04:57:05,569 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:57:37] 2026-01-10 04:57:06,132 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:57:37] 2026-01-10 04:57:06,268 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:57:37] 2026-01-10 04:57:06,268 | INFO     | aborting loop
[2026-01-09 23:57:37] 2026-01-10 04:57:06,411 | INFO     | all payload control threads have been joined
[2026-01-09 23:57:37] 2026-01-10 04:57:06,439 | INFO     | all data control threads have been joined
[2026-01-09 23:57:37] 2026-01-10 04:57:06,574 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:06,850 | INFO     | [job] validate thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:06,890 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:07,132 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:07,209 | INFO     | all job control threads have been joined
[2026-01-09 23:57:37] 2026-01-10 04:57:07,273 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:07,325 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:07,365 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:07,416 | INFO     | [payload] control thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:07,444 | INFO     | [data] control thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:07,575 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:07,612 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:07,888 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:57:37] 2026-01-10 04:57:07,907 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:07,935 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:08,215 | INFO     | [job] control thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:08,894 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:09,587 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:57:37] 2026-01-10 04:57:11,065 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139899861710656)>', '<ExcThread(monitor, started 139899223140096)>']
[2026-01-09 23:57:37] 2026-01-10 04:57:16,097 | INFO     | all workflow threads have been joined
[2026-01-09 23:57:37] 2026-01-10 04:57:16,097 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:57:37] 2026-01-10 04:57:16,098 | INFO     | traces error code: 0
[2026-01-09 23:57:37] 2026-01-10 04:57:16,098 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:57:37] 2026-01-10 04:57:36,998 | INFO     | PID=2545714 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:57:37] 2026-01-10 04:57:37,001 | INFO     | .. there are 22 such processes running
[2026-01-09 23:57:37] 2026-01-10 04:57:37,001 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:57:37] 2026-01-10 04:57:37,001 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:57:37] 2026-01-10 04:57:37,001 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:57:37] 2026-01-10 04:57:37,001 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:57:37] 2026-01-10 04:57:37,001 | INFO     | [monitor] control thread has ended
[2026-01-09 23:57:37] 2026-01-10 04:57:37,112 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:57:37] 2026-01-10 04:57:37,115 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:57:37] 2026-01-10 04:57:37,118 [wrapper] pilotpid: 2545714
[2026-01-09 23:57:37] 2026-01-10 04:57:37,121 [wrapper] Pilot exit status: 0
[2026-01-09 23:57:37] 2026-01-10 04:57:37,132 [wrapper] pandaids: 6963165508
[2026-01-09 23:57:37] 2026-01-10 04:57:37,227 [wrapper] cleanup supervisor_pilot  722519 2545715
[2026-01-09 23:57:37] 2026-01-10 04:57:37,230 [wrapper] Test setup, not cleaning
[2026-01-09 23:57:37] 2026-01-10 04:57:37,233 [wrapper] apfmon messages muted
[2026-01-09 23:57:37] 2026-01-10 04:57:37,235 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:57:37] 2026-01-10 04:57:37,237 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:57:37]  *** Error codes and diagnostics ***
[2026-01-09 23:57:37]     "exeErrorCode": 0,
[2026-01-09 23:57:37]     "exeErrorDiag": "",
[2026-01-09 23:57:37]     "pilotErrorCode": 0,
[2026-01-09 23:57:37]     "pilotErrorDiag": "",
[2026-01-09 23:57:37]  *** Listing of results directory ***
[2026-01-09 23:57:37] total 451852
[2026-01-09 23:57:37] -rwx------. 1 boincer umatlas     36322 Jan  8 19:56 runpilot2-wrapper.sh
[2026-01-09 23:57:37] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 19:56 queuedata.json
[2026-01-09 23:57:37] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 23:57:37] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:57:37] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:00 run_atlas
[2026-01-09 23:57:37] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:00 job.xml
[2026-01-09 23:57:37] -rw-r--r--. 2 boincer umatlas 226415973 Jan  9 19:00 EVNT.47898824._001345.pool.root.1
[2026-01-09 23:57:37] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:00 start_atlas.sh
[2026-01-09 23:57:37] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:00 shared
[2026-01-09 23:57:37] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 19:00 input.tar.gz
[2026-01-09 23:57:37] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:00 boinc_lockfile
[2026-01-09 23:57:37] -rw-r--r--. 1 boincer umatlas      2520 Jan  9 19:00 pandaJob.out
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas        57 Jan  9 19:00 setup.sh.local
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas    989374 Jan  9 19:00 agis_schedconf.cvmfs.json
[2026-01-09 23:57:37] drwx------. 5 boincer umatlas      4096 Jan  9 19:00 pilot3
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas 226571521 Jan  9 23:56 HITS.47898826._034727.pool.root.1
[2026-01-09 23:57:37] -rw-r--r--. 1 boincer umatlas       530 Jan  9 23:56 boinc_task_state.xml
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas        95 Jan  9 23:56 pilot_heartbeat.json
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas      1035 Jan  9 23:56 memory_monitor_summary.json
[2026-01-09 23:57:37] -rw-r--r--. 1 boincer umatlas      6944 Jan  9 23:56 init_data.xml
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas   1516240 Jan  9 23:56 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas    504693 Jan  9 23:56 log.47898826._034727.job.log.tgz.1
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas      7773 Jan  9 23:57 heartbeat.json
[2026-01-09 23:57:37] -rw-r--r--. 1 boincer umatlas        28 Jan  9 23:57 wrapper_checkpoint.txt
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas       823 Jan  9 23:57 pilotlog.txt
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas   2391970 Jan  9 23:57 log.47898826._034727.job.log.1
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas       357 Jan  9 23:57 output.list
[2026-01-09 23:57:37] -rw-r--r--. 1 boincer umatlas       620 Jan  9 23:57 runtime_log
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas   2918400 Jan  9 23:57 result.tar.gz
[2026-01-09 23:57:37] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 23:57 boinc_mmap_file
[2026-01-09 23:57:37] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 23:57 runtime_log.err
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas       657 Jan  9 23:57 kILNDm2yFy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNVgKDmZZkOGm.diag
[2026-01-09 23:57:37] -rw-r--r--. 1 boincer umatlas     21141 Jan  9 23:57 stderr.txt
[2026-01-09 23:57:37] HITS file was successfully produced:
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas 226571521 Jan  9 23:56 shared/HITS.pool.root.1
[2026-01-09 23:57:37]  *** Contents of shared directory: ***
[2026-01-09 23:57:37] total 445828
[2026-01-09 23:57:37] -rw-r--r--. 2 boincer umatlas 226415973 Jan  9 19:00 ATLAS.root_0
[2026-01-09 23:57:37] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:00 start_atlas.sh
[2026-01-09 23:57:37] -rw-r--r--. 2 boincer umatlas    592402 Jan  9 19:00 input.tar.gz
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas 226571521 Jan  9 23:56 HITS.pool.root.1
[2026-01-09 23:57:37] -rw-------. 1 boincer umatlas   2918400 Jan  9 23:57 result.tar.gz
23:57:39 (2539726): run_atlas exited; CPU time 46686.937834
23:57:39 (2539726): called boinc_finish(0)

</stderr_txt>
]]>

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