Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:52:52 (11852): wrapper (7.7.26015): starting
08:52:52 (11852): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 08:52:52] Arguments: --nthreads 8
[2026-01-10 08:52:52] Threads: 8
[2026-01-10 08:52:52] Checking for CVMFS
[2026-01-10 08:52:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 08:52:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 08:52:52] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 08:52:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 08:52:52] 2.11.2.0 30928 36562 138032 154972 2 616 23482243 25165824 890 130560 0 17798341 99.796 14314036 3026 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 08:52:52] CVMFS is ok
[2026-01-10 08:52:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 08:52:52] Checking for apptainer binary...
[2026-01-10 08:52:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 08:52:52] Running /usr/bin/apptainer --version
[2026-01-10 08:52:52] apptainer version 1.3.2-1.el7
[2026-01-10 08:52:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 08:52:54] cg-vwn464.simple-grid.lan
[2026-01-10 08:52:54] apptainer works
[2026-01-10 08:52:54] Set ATHENA_PROC_NUMBER=8
[2026-01-10 08:52:54] Set ATHENA_CORE_NUMBER=8
[2026-01-10 08:52:54] Starting ATLAS job with PandaID=6963188264
[2026-01-10 08:52:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 14:15:54]  *** The last 200 lines of the pilot log: ***
[2026-01-10 14:15:54] 2026-01-10 13:15:00,512 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6963188264/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 14:15:54] 2026-01-10 13:15:00,513 | INFO     | extracted standard info from prmon json
[2026-01-10 14:15:54] 2026-01-10 13:15:00,513 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 14:15:54] 2026-01-10 13:15:00,513 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 14:15:54] 2026-01-10 13:15:00,514 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 14:15:54] 2026-01-10 13:15:00,514 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 14:15:54] 2026-01-10 13:15:00,528 | INFO     | fitting pss+swap vs Time
[2026-01-10 14:15:54] 2026-01-10 13:15:00,529 | INFO     | sum of square deviations: 9599817202.5
[2026-01-10 14:15:54] 2026-01-10 13:15:00,531 | INFO     | sum of deviations: 21948336525.499996
[2026-01-10 14:15:54] 2026-01-10 13:15:00,532 | INFO     | mean x: 1768041173.5
[2026-01-10 14:15:54] 2026-01-10 13:15:00,532 | INFO     | mean y: 2480984.9968152866
[2026-01-10 14:15:54] 2026-01-10 13:15:00,532 | INFO     | intersect: -4039842097.65648
[2026-01-10 14:15:54] 2026-01-10 13:15:00,532 | INFO     | chi2: 2.715324856794125
[2026-01-10 14:15:54] 2026-01-10 13:15:00,533 | INFO     | sum of square deviations: 9148487810.0
[2026-01-10 14:15:54] 2026-01-10 13:15:00,536 | INFO     | sum of deviations: 42117923908.999985
[2026-01-10 14:15:54] 2026-01-10 13:15:00,536 | INFO     | mean x: 1768041021.0
[2026-01-10 14:15:54] 2026-01-10 13:15:00,536 | INFO     | mean y: 2487709.1197411004
[2026-01-10 14:15:54] 2026-01-10 13:15:00,536 | INFO     | intersect: -8137241909.262801
[2026-01-10 14:15:54] 2026-01-10 13:15:00,537 | INFO     | chi2: 1.944532038905942
[2026-01-10 14:15:54] 2026-01-10 13:15:00,537 | INFO     | current chi2=1.944532038905942 (change=28.38676248845698 %)
[2026-01-10 14:15:54] 2026-01-10 13:15:00,537 | INFO     | sum of square deviations: 8711530780.0
[2026-01-10 14:15:54] 2026-01-10 13:15:00,540 | INFO     | sum of deviations: 41087590721.0
[2026-01-10 14:15:54] 2026-01-10 13:15:00,540 | INFO     | mean x: 1768040868.5
[2026-01-10 14:15:54] 2026-01-10 13:15:00,540 | INFO     | mean y: 2487349.5
[2026-01-10 14:15:54] 2026-01-10 13:15:00,541 | INFO     | intersect: -8336407549.397365
[2026-01-10 14:15:54] 2026-01-10 13:15:00,541 | INFO     | chi2: 1.9452184792982543
[2026-01-10 14:15:54] 2026-01-10 13:15:00,541 | INFO     | current chi2=1.9452184792982543 (change=-0.035301058484928524 %)
[2026-01-10 14:15:54] 2026-01-10 13:15:00,541 | INFO     | right removable region: 303
[2026-01-10 14:15:54] 2026-01-10 13:15:00,542 | INFO     | sum of square deviations: 9148487810.0
[2026-01-10 14:15:54] 2026-01-10 13:15:00,548 | INFO     | sum of deviations: -37976873090.0
[2026-01-10 14:15:54] 2026-01-10 13:15:00,548 | INFO     | mean x: 1768041326.0
[2026-01-10 14:15:54] 2026-01-10 13:15:00,548 | INFO     | mean y: 2501123.8964401293
[2026-01-10 14:15:54] 2026-01-10 13:15:00,548 | INFO     | intersect: 7341930595.72489
[2026-01-10 14:15:54] 2026-01-10 13:15:00,549 | INFO     | chi2: 0.9105349340993385
[2026-01-10 14:15:54] 2026-01-10 13:15:00,549 | INFO     | current chi2=0.9105349340993385 (change=66.46681402333677 %)
[2026-01-10 14:15:54] 2026-01-10 13:15:00,549 | INFO     | sum of square deviations: 8711530780.0
[2026-01-10 14:15:54] 2026-01-10 13:15:00,552 | INFO     | sum of deviations: -34217302302.0
[2026-01-10 14:15:54] 2026-01-10 13:15:00,552 | INFO     | mean x: 1768041478.5
[2026-01-10 14:15:54] 2026-01-10 13:15:00,552 | INFO     | mean y: 2499793.4736842103
[2026-01-10 14:15:54] 2026-01-10 13:15:00,553 | INFO     | intersect: 6947043901.749169
[2026-01-10 14:15:54] 2026-01-10 13:15:00,553 | INFO     | chi2: 0.8938742758352329
[2026-01-10 14:15:54] 2026-01-10 13:15:00,553 | INFO     | current chi2=0.8938742758352329 (change=1.829765958467652 %)
[2026-01-10 14:15:54] 2026-01-10 13:15:00,553 | INFO     | left removable region: 20
[2026-01-10 14:15:54] 2026-01-10 13:15:00,554 | INFO     | sum of square deviations: 7028008982.0
[2026-01-10 14:15:54] 2026-01-10 13:15:00,556 | INFO     | sum of deviations: 6236374406.0
[2026-01-10 14:15:54] 2026-01-10 13:15:00,564 | INFO     | mean x: 1768041448.0
[2026-01-10 14:15:54] 2026-01-10 13:15:00,564 | INFO     | mean y: 2499016.434628975
[2026-01-10 14:15:54] 2026-01-10 13:15:00,564 | INFO     | intersect: -1566390332.3545358
[2026-01-10 14:15:54] 2026-01-10 13:15:00,564 | INFO     | chi2: 0.024646145783660967
[2026-01-10 14:15:54] 2026-01-10 13:15:00,565 | INFO     | current memory leak: 0.89 B/s (using 283 data points, chi2=0.02)
[2026-01-10 14:15:54] 2026-01-10 13:15:00,565 | INFO     | could have reported an average CPU frequency of 2250 MHz (13 samples)
[2026-01-10 14:15:54] 2026-01-10 13:15:00,566 | INFO     | ..............................
[2026-01-10 14:15:54] 2026-01-10 13:15:00,566 | INFO     | . Timing measurements:
[2026-01-10 14:15:54] 2026-01-10 13:15:00,566 | INFO     | . get job = 0 s
[2026-01-10 14:15:54] 2026-01-10 13:15:00,566 | INFO     | . initial setup = 1 s
[2026-01-10 14:15:54] 2026-01-10 13:15:00,566 | INFO     | . payload setup = 9 s
[2026-01-10 14:15:54] 2026-01-10 13:15:00,566 | INFO     | . stage-in = 0 s
[2026-01-10 14:15:54] 2026-01-10 13:15:00,566 | INFO     | . payload execution = 19155 s
[2026-01-10 14:15:54] 2026-01-10 13:15:00,566 | INFO     | . stage-out = 8 s
[2026-01-10 14:15:54] 2026-01-10 13:15:00,566 | INFO     | . log creation = 1 s
[2026-01-10 14:15:54] 2026-01-10 13:15:00,567 | INFO     | ..............................
[2026-01-10 14:15:54] 2026-01-10 13:15:01,236 | INFO     | 
[2026-01-10 14:15:54] 2026-01-10 13:15:01,236 | INFO     | job summary report
[2026-01-10 14:15:54] 2026-01-10 13:15:01,236 | INFO     | --------------------------------------------------
[2026-01-10 14:15:54] 2026-01-10 13:15:01,236 | INFO     | PanDA job id: 6963188264
[2026-01-10 14:15:54] 2026-01-10 13:15:01,236 | INFO     | task id: 47898826
[2026-01-10 14:15:54] 2026-01-10 13:15:01,236 | INFO     | errors: (none)
[2026-01-10 14:15:54] 2026-01-10 13:15:01,236 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 14:15:54] 2026-01-10 13:15:01,236 | INFO     | pilot state: finished 
[2026-01-10 14:15:54] 2026-01-10 13:15:01,237 | INFO     | transexitcode: 0
[2026-01-10 14:15:54] 2026-01-10 13:15:01,237 | INFO     | exeerrorcode: 0
[2026-01-10 14:15:54] 2026-01-10 13:15:01,237 | INFO     | exeerrordiag: 
[2026-01-10 14:15:54] 2026-01-10 13:15:01,237 | INFO     | exitcode: 0
[2026-01-10 14:15:54] 2026-01-10 13:15:01,237 | INFO     | exitmsg: OK
[2026-01-10 14:15:54] 2026-01-10 13:15:01,237 | INFO     | cpuconsumptiontime: 74016 s
[2026-01-10 14:15:54] 2026-01-10 13:15:01,237 | INFO     | nevents: 400
[2026-01-10 14:15:54] 2026-01-10 13:15:01,237 | INFO     | neventsw: 0
[2026-01-10 14:15:54] 2026-01-10 13:15:01,237 | INFO     | pid: 22001
[2026-01-10 14:15:54] 2026-01-10 13:15:01,237 | INFO     | pgrp: 22001
[2026-01-10 14:15:54] 2026-01-10 13:15:01,238 | INFO     | corecount: 8
[2026-01-10 14:15:54] 2026-01-10 13:15:01,238 | INFO     | event service: False
[2026-01-10 14:15:54] 2026-01-10 13:15:01,238 | INFO     | sizes: {0: 2283801, 1: 2284000, 7: 2284262, 11: 2284290, 19168: 2316398, 19177: 2325398, 19180: 2325582, 19292: 2325776}
[2026-01-10 14:15:54] 2026-01-10 13:15:01,238 | INFO     | --------------------------------------------------
[2026-01-10 14:15:54] 2026-01-10 13:15:01,238 | INFO     | 
[2026-01-10 14:15:54] 2026-01-10 13:15:01,238 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2026-01-10 14:15:54] 2026-01-10 13:15:01,701 | INFO     | time since job start (19310s) is within the limit (349056.0s)
[2026-01-10 14:15:54] 2026-01-10 13:15:01,764 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,764 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,764 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,765 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,765 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,765 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,765 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,765 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,765 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,765 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,765 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,765 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,766 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,766 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,766 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,766 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,766 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,766 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 14:15:54] 2026-01-10 13:15:01,766 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,766 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 14:15:54] 2026-01-10 13:15:01,766 | INFO     | job 6963188264 has completed (purged errors)
[2026-01-10 14:15:54] 2026-01-10 13:15:01,767 | INFO     | overall cleanup function is called
[2026-01-10 14:15:54] 2026-01-10 13:15:02,776 | INFO     | --- collectZombieJob: --- 10, [22001]
[2026-01-10 14:15:54] 2026-01-10 13:15:02,776 | INFO     | zombie collector waiting for pid 22001
[2026-01-10 14:15:54] 2026-01-10 13:15:02,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 14:15:54] 2026-01-10 13:15:02,776 | INFO     | collected zombie processes
[2026-01-10 14:15:54] 2026-01-10 13:15:02,776 | INFO     | will attempt to kill all subprocesses of pid=22001
[2026-01-10 14:15:54] 2026-01-10 13:15:02,807 | INFO     | PID=15572 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 14:15:54] 2026-01-10 13:15:02,807 | INFO     | .. there are 2 such processes running
[2026-01-10 14:15:54] 2026-01-10 13:15:02,891 | INFO     | process IDs to be killed: [22001] (in reverse order)
[2026-01-10 14:15:54] 2026-01-10 13:15:03,745 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 14:15:54] 2026-01-10 13:15:03,745 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 14:15:54] 2026-01-10 13:15:03,747 | INFO     | did not find any defunct processes belonging to 22001
[2026-01-10 14:15:54] 2026-01-10 13:15:03,749 | INFO     | did not find any defunct processes belonging to 22001
[2026-01-10 14:15:54] 2026-01-10 13:15:03,749 | INFO     | ready for new job
[2026-01-10 14:15:54] 2026-01-10 13:15:03,749 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 14:15:54] 2026-01-10 13:15:03,751 | INFO     | ***************************************
[2026-01-10 14:15:54] 2026-01-10 13:15:03,752 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 14:15:54] 2026-01-10 13:15:03,752 | INFO     | ***************************************
[2026-01-10 14:15:54] 2026-01-10 13:15:03,752 | INFO     | 
[2026-01-10 14:15:54] 2026-01-10 13:15:03,752 | INFO     | pilot is running in a VM
[2026-01-10 14:15:54] 2026-01-10 13:15:03,752 | INFO     | architecture information:
[2026-01-10 14:15:54] 2026-01-10 13:15:03,753 | INFO     | executing command: cat /etc/os-release
[2026-01-10 14:15:54] 2026-01-10 13:15:03,982 | INFO     | cat /etc/os-release:
[2026-01-10 14:15:54] NAME="CentOS Linux"
[2026-01-10 14:15:54] VERSION="7 (Core)"
[2026-01-10 14:15:54] ID="centos"
[2026-01-10 14:15:54] ID_LIKE="rhel fedora"
[2026-01-10 14:15:54] VERSION_ID="7"
[2026-01-10 14:15:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 14:15:54] ANSI_COLOR="0;31"
[2026-01-10 14:15:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 14:15:54] HOME_URL="https://www.centos.org/"
[2026-01-10 14:15:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 14:15:54] 
[2026-01-10 14:15:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 14:15:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 14:15:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 14:15:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 14:15:54] 
[2026-01-10 14:15:54] 2026-01-10 13:15:03,982 | INFO     | ***************************************
[2026-01-10 14:15:54] 2026-01-10 13:15:04,486 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2026-01-10 14:15:54] 2026-01-10 13:15:04,700 | INFO     | sufficient remaining disk space (497373151232 B)
[2026-01-10 14:15:54] 2026-01-10 13:15:04,700 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 14:15:54] 2026-01-10 13:15:04,701 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 14:15:54] 2026-01-10 13:15:04,701 | INFO     | update_server=False
[2026-01-10 14:15:54] 2026-01-10 13:15:04,701 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 14:15:54] 2026-01-10 13:15:04,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:15:54] 2026-01-10 13:15:04,702 | INFO     | aborting loop
[2026-01-10 14:15:54] 2026-01-10 13:15:04,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 14:15:54] 2026-01-10 13:15:04,761 | INFO     | all payload control threads have been joined
[2026-01-10 14:15:54] 2026-01-10 13:15:05,192 | INFO     | all data control threads have been joined
[2026-01-10 14:15:54] 2026-01-10 13:15:05,707 | INFO     | [job] retrieve thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:05,708 | INFO     | [job] job monitor thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:05,731 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:05,767 | INFO     | [payload] control thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:05,778 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 14:15:54] 2026-01-10 13:15:05,836 | INFO     | [data] copytool_in thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:05,922 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:06,122 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:06,199 | INFO     | [data] control thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:06,240 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:06,278 | INFO     | all job control threads have been joined
[2026-01-10 14:15:54] 2026-01-10 13:15:06,404 | INFO     | [payload] failed_post thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:06,538 | INFO     | [payload] validate_post thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:06,598 | INFO     | [job] validate thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:06,709 | INFO     | [data] copytool_out thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:06,784 | INFO     | [job] queue monitor thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:07,127 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 14:15:54] 2026-01-10 13:15:07,285 | INFO     | [job] control thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:11,136 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 14:15:54] 2026-01-10 13:15:34,906 | INFO     | PID=15572 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 14:15:54] 2026-01-10 13:15:34,906 | INFO     | .. there are 2 such processes running
[2026-01-10 14:15:54] 2026-01-10 13:15:34,906 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 14:15:54] 2026-01-10 13:15:34,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 14:15:54] 2026-01-10 13:15:34,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 14:15:54] 2026-01-10 13:15:44,437 | INFO     | [monitor] cgroup control has ended
[2026-01-10 14:15:54] 2026-01-10 13:15:45,381 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496599078720)>', '<ExcThread(monitor, started 140495485396736)>']
[2026-01-10 14:15:54] 2026-01-10 13:15:45,972 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 14:15:54] 2026-01-10 13:15:45,973 | INFO     | [monitor] control thread has ended
[2026-01-10 14:15:54] 2026-01-10 13:15:50,407 | INFO     | all workflow threads have been joined
[2026-01-10 14:15:54] 2026-01-10 13:15:50,407 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 14:15:54] 2026-01-10 13:15:50,407 | INFO     | traces error code: 0
[2026-01-10 14:15:54] 2026-01-10 13:15:50,407 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 14:15:54] 2026-01-10 13:15:50,754 [wrapper] ==== pilot stdout END ====
[2026-01-10 14:15:54] 2026-01-10 13:15:50,844 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 14:15:54] 2026-01-10 13:15:50,900 [wrapper] pilotpid: 15572
[2026-01-10 14:15:54] 2026-01-10 13:15:50,999 [wrapper] Pilot exit status: 0
[2026-01-10 14:15:54] 2026-01-10 13:15:51,277 [wrapper] pandaids: 6963188264
[2026-01-10 14:15:54] 2026-01-10 13:15:51,390 [wrapper] cleanup supervisor_pilot 18761 15573
[2026-01-10 14:15:54] 2026-01-10 13:15:51,506 [wrapper] Test setup, not cleaning
[2026-01-10 14:15:54] 2026-01-10 13:15:51,592 [wrapper] apfmon messages muted
[2026-01-10 14:15:54] 2026-01-10 13:15:51,696 [wrapper] ==== wrapper stdout END ====
[2026-01-10 14:15:54] 2026-01-10 13:15:51,791 [wrapper] ==== wrapper stderr END ====
[2026-01-10 14:15:54]  *** Error codes and diagnostics ***
[2026-01-10 14:15:54]     "exeErrorCode": 0,
[2026-01-10 14:15:54]     "exeErrorDiag": "",
[2026-01-10 14:15:54]     "pilotErrorCode": 0,
[2026-01-10 14:15:54]     "pilotErrorDiag": "",
[2026-01-10 14:15:54]  *** Listing of results directory ***
[2026-01-10 14:15:54] total 436972
[2026-01-10 14:15:54] -rw-r--r--. 1 boinc boinc      5112 Jan  9 05:21 queuedata.json
[2026-01-10 14:15:54] -rw-r--r--. 1 boinc boinc    579449 Jan  9 05:21 pilot3.tar.gz
[2026-01-10 14:15:54] -rwx------. 1 boinc boinc     36322 Jan  9 05:22 runpilot2-wrapper.sh
[2026-01-10 14:15:54] -rw-r--r--. 1 boinc boinc       100 Jan 10 08:52 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 14:15:54] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 08:52 run_atlas
[2026-01-10 14:15:54] -rw-r--r--. 1 boinc boinc       105 Jan 10 08:52 job.xml
[2026-01-10 14:15:54] -rw-r--r--. 1 boinc boinc      6392 Jan 10 08:52 init_data.xml
[2026-01-10 14:15:54] -rw-r--r--. 2 boinc boinc 224620357 Jan 10 08:52 EVNT.47898824._001435.pool.root.1
[2026-01-10 14:15:54] -rw-r--r--. 2 boinc boinc     15847 Jan 10 08:52 start_atlas.sh
[2026-01-10 14:15:54] drwxrwx--x. 2 boinc boinc        68 Jan 10 08:52 shared
[2026-01-10 14:15:54] -rw-r--r--. 2 boinc boinc    592397 Jan 10 08:52 input.tar.gz
[2026-01-10 14:15:54] -rw-r--r--. 1 boinc boinc         0 Jan 10 08:52 boinc_lockfile
[2026-01-10 14:15:54] -rw-r--r--. 1 boinc boinc      2520 Jan 10 08:52 pandaJob.out
[2026-01-10 14:15:54] -rw-------. 1 boinc boinc    989374 Jan 10 08:53 agis_schedconf.cvmfs.json
[2026-01-10 14:15:54] drwx------. 5 boinc boinc      4096 Jan 10 08:53 pilot3
[2026-01-10 14:15:54] -rw-------. 1 boinc boinc 212715493 Jan 10 14:11 HITS.47898826._037416.pool.root.1
[2026-01-10 14:15:54] -rw-r--r--. 1 boinc boinc       531 Jan 10 14:12 boinc_task_state.xml
[2026-01-10 14:15:54] -rw-------. 1 boinc boinc      1012 Jan 10 14:12 memory_monitor_summary.json
[2026-01-10 14:15:54] -rw-------. 1 boinc boinc   1516240 Jan 10 14:13 agis_ddmendpoints.agis.ALL.json
[2026-01-10 14:15:54] -rw-------. 1 boinc boinc    526648 Jan 10 14:13 log.47898826._037416.job.log.tgz.1
[2026-01-10 14:15:54] -rw-------. 1 boinc boinc        95 Jan 10 14:14 pilot_heartbeat.json
[2026-01-10 14:15:54] -rw-------. 1 boinc boinc      7770 Jan 10 14:15 heartbeat.json
[2026-01-10 14:15:54] -rw-r--r--. 1 boinc boinc      8192 Jan 10 14:15 boinc_mmap_file
[2026-01-10 14:15:54] -rw-r--r--. 1 boinc boinc        28 Jan 10 14:15 wrapper_checkpoint.txt
[2026-01-10 14:15:54] -rw-------. 1 boinc boinc      4885 Jan 10 14:15 pilotlog.txt
[2026-01-10 14:15:54] -rw-------. 1 boinc boinc   2587438 Jan 10 14:15 log.47898826._037416.job.log.1
[2026-01-10 14:15:54] -rw-------. 1 boinc boinc       357 Jan 10 14:15 output.list
[2026-01-10 14:15:54] -rw-r--r--. 1 boinc boinc       620 Jan 10 14:15 runtime_log
[2026-01-10 14:15:54] -rw-------. 1 boinc boinc   3133440 Jan 10 14:15 result.tar.gz
[2026-01-10 14:15:54] -rw-------. 1 boinc boinc       656 Jan 10 14:15 ZZWKDmoBJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDms5lKDmzxzcTn.diag
[2026-01-10 14:15:54] -rw-r--r--. 1 boinc boinc      8833 Jan 10 14:15 runtime_log.err
[2026-01-10 14:15:54] -rw-r--r--. 1 boinc boinc     20819 Jan 10 14:15 stderr.txt
[2026-01-10 14:15:54] HITS file was successfully produced:
[2026-01-10 14:15:54] -rw-------. 1 boinc boinc 212715493 Jan 10 14:11 shared/HITS.pool.root.1
[2026-01-10 14:15:54]  *** Contents of shared directory: ***
[2026-01-10 14:15:54] total 430744
[2026-01-10 14:15:54] -rw-r--r--. 2 boinc boinc 224620357 Jan 10 08:52 ATLAS.root_0
[2026-01-10 14:15:54] -rw-r--r--. 2 boinc boinc     15847 Jan 10 08:52 start_atlas.sh
[2026-01-10 14:15:54] -rw-r--r--. 2 boinc boinc    592397 Jan 10 08:52 input.tar.gz
[2026-01-10 14:15:54] -rw-------. 1 boinc boinc 212715493 Jan 10 14:11 HITS.pool.root.1
[2026-01-10 14:15:54] -rw-------. 1 boinc boinc   3133440 Jan 10 14:15 result.tar.gz
14:15:56 (11852): run_atlas exited; CPU time 74181.107053
14:15:56 (11852): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN