Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:41:12 (2824836): wrapper (7.7.26015): starting
22:41:12 (2824836): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 22:41:12] Arguments: --nthreads 9
[2026-01-09 22:41:12] Threads: 9
[2026-01-09 22:41:12] Checking for CVMFS
[2026-01-09 22:41:12] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 22:41:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 22:41:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 22:41:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 22:41:12] 2.13.3.0 388524 17812 75680 154966 2 81 30669875 32515072 0 16776704 0 3087870 99.977 551718 82284 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 22:41:12] CVMFS is ok
[2026-01-09 22:41:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 22:41:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 22:41:12] Further information can be found at the LHC@home message board.
[2026-01-09 22:41:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 22:41:12] Checking for apptainer binary...
[2026-01-09 22:41:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 22:41:12] Running /usr/bin/apptainer --version
[2026-01-09 22:41:12] apptainer version 1.4.5-2.el9
[2026-01-09 22:41:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 22:41:12] c-205-38.aglt2.org
[2026-01-09 22:41:12] apptainer works
[2026-01-09 22:41:12] Set ATHENA_PROC_NUMBER=9
[2026-01-09 22:41:12] Set ATHENA_CORE_NUMBER=9
[2026-01-09 22:41:12] Starting ATLAS job with PandaID=6962917827
[2026-01-09 22:41:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:48:28]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:48:28]  lfn=log.47898826._019907.job.log.tgz.1
[2026-01-09 23:48:28]  mtime=0
[2026-01-09 23:48:28]  protocol_id=None
[2026-01-09 23:48:28]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 23:48:28]  replicas=None
[2026-01-09 23:48:28]  scope=mc23_13p6TeV
[2026-01-09 23:48:28]  status=None
[2026-01-09 23:48:28]  status_code=0
[2026-01-09 23:48:28]  storage_token=
[2026-01-09 23:48:28]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6962917827/log.47898826._019907.job.log.tgz.1
[2026-01-09 23:48:28]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/0b/log.47898826._019907.job.log.tgz.1
[2026-01-09 23:48:28]  workdir=None
[2026-01-09 23:48:28] ]
[2026-01-09 23:48:28] 2026-01-10 04:47:39,223 | INFO     | transferring file log.47898826._019907.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6962917827/log.47898826._019907.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 23:48:28] 2026-01-10 04:47:39,223 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6962917827/log.47898826._019907.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._019907.job
[2026-01-09 23:48:28] 2026-01-10 04:47:39,231 | INFO     | adding to output.list: log.47898826._019907.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/17/0b/log.47898826._019907.job.log.tg
[2026-01-09 23:48:28] 2026-01-10 04:47:39,232 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 23:48:28] 2026-01-10 04:47:39,232 | INFO     | summary of transferred files:
[2026-01-09 23:48:28] 2026-01-10 04:47:39,232 | INFO     |  -- lfn=log.47898826._019907.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 23:48:28] 2026-01-10 04:47:39,232 | INFO     | stage-out finished correctly
[2026-01-09 23:48:28] 2026-01-10 04:47:39,762 | INFO     | monitor loop #306: job 0:6962917827 is in state 'finished'
[2026-01-09 23:48:28] 2026-01-10 04:47:39,762 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:48:28] 2026-01-10 04:47:40,054 | INFO     | time since job start (3982s) is within the limit (174528.0s)
[2026-01-09 23:48:28] 2026-01-10 04:47:41,141 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 23:48:28] 2026-01-10 04:47:41,802 | INFO     | job 6962917827 has state=finished
[2026-01-09 23:48:28] 2026-01-10 04:47:41,803 | INFO     | preparing for final server update for job 6962917827 in state='finished'
[2026-01-09 23:48:28] 2026-01-10 04:47:41,803 | INFO     | this job has now completed (state=finished)
[2026-01-09 23:48:28] 2026-01-10 04:47:41,803 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 23:48:28] 2026-01-10 04:47:41,803 | INFO     | log transfer has been attempted: DONE
[2026-01-09 23:48:28] 2026-01-10 04:47:41,803 | INFO     | job 6962917827 has finished - writing final server update
[2026-01-09 23:48:28] 2026-01-10 04:47:41,803 | INFO     | total number of processed events: 400 (read)
[2026-01-09 23:48:28] 2026-01-10 04:47:41,804 | INFO     | executing command: lscpu
[2026-01-09 23:48:28] 2026-01-10 04:47:41,816 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 23:48:28] 2026-01-10 04:47:42,060 | INFO     | time since job start (3984s) is within the limit (174528.0s)
[2026-01-09 23:48:28] 2026-01-10 04:47:42,265 | INFO     | monitor loop #307: job 0:6962917827 is in state 'finished'
[2026-01-09 23:48:28] 2026-01-10 04:47:42,265 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:48:28] 2026-01-10 04:47:43,143 | INFO     | PID=2828543 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:48:28] 2026-01-10 04:47:43,670 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 23:48:28] 2026-01-10 04:47:43,672 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 2705.0133125
[2026-01-09 23:48:28] 2026-01-10 04:47:43,673 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962917827/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:48:28] 2026-01-10 04:47:43,673 | INFO     | extracted standard info from prmon json
[2026-01-09 23:48:28] 2026-01-10 04:47:43,674 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:48:28] 2026-01-10 04:47:43,674 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:48:28] 2026-01-10 04:47:43,674 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 23:48:28] 2026-01-10 04:47:43,674 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 23:48:28] 2026-01-10 04:47:43,675 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:48:28] 2026-01-10 04:47:43,675 | INFO     | sum of square deviations: 60482994.5
[2026-01-09 23:48:28] 2026-01-10 04:47:43,675 | INFO     | sum of deviations: -9940694474.500002
[2026-01-09 23:48:28] 2026-01-10 04:47:43,675 | INFO     | mean x: 1768018539.5
[2026-01-09 23:48:28] 2026-01-10 04:47:43,675 | INFO     | mean y: 2819728.1896551726
[2026-01-09 23:48:28] 2026-01-10 04:47:43,675 | INFO     | intersect: 290585855037.74615
[2026-01-09 23:48:28] 2026-01-10 04:47:43,675 | INFO     | chi2: 0.0873705475164861
[2026-01-09 23:48:28] 2026-01-10 04:47:43,675 | INFO     | current memory leak: -164.36 B/s (using 58 data points, chi2=0.09)
[2026-01-09 23:48:28] 2026-01-10 04:47:43,676 | INFO     | could have reported an average CPU frequency of 2899 MHz (6 samples)
[2026-01-09 23:48:28] 2026-01-10 04:47:43,676 | INFO     | ..............................
[2026-01-09 23:48:28] 2026-01-10 04:47:43,676 | INFO     | . Timing measurements:
[2026-01-09 23:48:28] 2026-01-10 04:47:43,676 | INFO     | . get job = 0 s
[2026-01-09 23:48:28] 2026-01-10 04:47:43,676 | INFO     | . initial setup = 2 s
[2026-01-09 23:48:28] 2026-01-10 04:47:43,676 | INFO     | . payload setup = 2 s
[2026-01-09 23:48:28] 2026-01-10 04:47:43,676 | INFO     | . stage-in = 0 s
[2026-01-09 23:48:28] 2026-01-10 04:47:43,676 | INFO     | . payload execution = 3960 s
[2026-01-09 23:48:28] 2026-01-10 04:47:43,676 | INFO     | . stage-out = 0 s
[2026-01-09 23:48:28] 2026-01-10 04:47:43,676 | INFO     | . log creation = 0 s
[2026-01-09 23:48:28] 2026-01-10 04:47:43,676 | INFO     | ..............................
[2026-01-09 23:48:28] 2026-01-10 04:47:43,717 | INFO     | 
[2026-01-09 23:48:28] 2026-01-10 04:47:43,717 | INFO     | job summary report
[2026-01-09 23:48:28] 2026-01-10 04:47:43,717 | INFO     | --------------------------------------------------
[2026-01-09 23:48:28] 2026-01-10 04:47:43,717 | INFO     | PanDA job id: 6962917827
[2026-01-09 23:48:28] 2026-01-10 04:47:43,717 | INFO     | task id: 47898826
[2026-01-09 23:48:28] 2026-01-10 04:47:43,717 | INFO     | errors: (none)
[2026-01-09 23:48:28] 2026-01-10 04:47:43,717 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:48:28] 2026-01-10 04:47:43,717 | INFO     | pilot state: finished 
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | transexitcode: 0
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | exeerrorcode: 0
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | exeerrordiag: 
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | exitcode: 0
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | exitmsg: OK
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | cpuconsumptiontime: 32927 s
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | nevents: 400
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | neventsw: 0
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | pid: 2834907
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | pgrp: 2834907
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | corecount: 9
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | event service: False
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | sizes: {0: 2283969, 2: 2284231, 10: 2284259, 3966: 2310229, 3968: 2319227, 3970: 2319283, 3972: 2319605}
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | --------------------------------------------------
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | 
[2026-01-09 23:48:28] 2026-01-10 04:47:43,718 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 23:48:28] 2026-01-10 04:47:43,726 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,726 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,727 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:48:28] 2026-01-10 04:47:43,728 | INFO     | job 6962917827 has completed (purged errors)
[2026-01-09 23:48:28] 2026-01-10 04:47:43,728 | INFO     | overall cleanup function is called
[2026-01-09 23:48:28] 2026-01-10 04:47:44,734 | INFO     | --- collectZombieJob: --- 10, [2834907]
[2026-01-09 23:48:28] 2026-01-10 04:47:44,734 | INFO     | zombie collector waiting for pid 2834907
[2026-01-09 23:48:28] 2026-01-10 04:47:44,734 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:48:28] 2026-01-10 04:47:44,735 | INFO     | collected zombie processes
[2026-01-09 23:48:28] 2026-01-10 04:47:44,735 | INFO     | will attempt to kill all subprocesses of pid=2834907
[2026-01-09 23:48:28] 2026-01-10 04:47:44,795 | INFO     | process IDs to be killed: [2834907] (in reverse order)
[2026-01-09 23:48:28] 2026-01-10 04:47:44,814 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:48:28] 2026-01-10 04:47:44,814 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:48:28] 2026-01-10 04:47:44,816 | INFO     | did not find any defunct processes belonging to 2834907
[2026-01-09 23:48:28] 2026-01-10 04:47:44,817 | INFO     | did not find any defunct processes belonging to 2834907
[2026-01-09 23:48:28] 2026-01-10 04:47:44,817 | INFO     | ready for new job
[2026-01-09 23:48:28] 2026-01-10 04:47:44,817 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:48:28] 2026-01-10 04:47:44,818 | INFO     | ***************************************
[2026-01-09 23:48:28] 2026-01-10 04:47:44,818 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:48:28] 2026-01-10 04:47:44,818 | INFO     | ***************************************
[2026-01-09 23:48:28] 2026-01-10 04:47:44,818 | INFO     | 
[2026-01-09 23:48:28] 2026-01-10 04:47:44,819 | INFO     | architecture information:
[2026-01-09 23:48:28] 2026-01-10 04:47:44,819 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:48:28] 2026-01-10 04:47:44,825 | INFO     | cat /etc/os-release:
[2026-01-09 23:48:28] NAME="CentOS Linux"
[2026-01-09 23:48:28] VERSION="7 (Core)"
[2026-01-09 23:48:28] ID="centos"
[2026-01-09 23:48:28] ID_LIKE="rhel fedora"
[2026-01-09 23:48:28] VERSION_ID="7"
[2026-01-09 23:48:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:48:28] ANSI_COLOR="0;31"
[2026-01-09 23:48:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:48:28] HOME_URL="https://www.centos.org/"
[2026-01-09 23:48:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:48:28] 
[2026-01-09 23:48:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:48:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:48:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:48:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:48:28] 
[2026-01-09 23:48:28] 2026-01-10 04:47:44,825 | INFO     | ***************************************
[2026-01-09 23:48:28] 2026-01-10 04:47:45,328 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 23:48:28] 2026-01-10 04:47:45,334 | INFO     | sufficient remaining disk space (21035483136 B)
[2026-01-09 23:48:28] 2026-01-10 04:47:45,334 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:48:28] 2026-01-10 04:47:45,334 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:48:28] 2026-01-10 04:47:45,334 | INFO     | update_server=False
[2026-01-09 23:48:28] 2026-01-10 04:47:45,334 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:48:28] 2026-01-10 04:47:45,334 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:48:28] 2026-01-10 04:47:45,334 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:48:28] 2026-01-10 04:47:45,494 | INFO     | all data control threads have been joined
[2026-01-09 23:48:28] 2026-01-10 04:47:45,773 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:48:28] 2026-01-10 04:47:45,773 | INFO     | aborting loop
[2026-01-09 23:48:28] 2026-01-10 04:47:45,844 | INFO     | all payload control threads have been joined
[2026-01-09 23:48:28] 2026-01-10 04:47:46,039 | INFO     | all job control threads have been joined
[2026-01-09 23:48:28] 2026-01-10 04:47:46,339 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:47:46,340 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:47:46,476 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:47:46,499 | INFO     | [data] control thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:47:46,529 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:47:46,778 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:47:46,846 | INFO     | [payload] control thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:47:47,045 | INFO     | [job] control thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:47:47,189 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:48:28] 2026-01-10 04:47:47,340 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:47:47,417 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:47:47,500 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:47:47,523 | INFO     | [job] validate thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:47:47,612 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:47:47,697 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:47:51,195 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:47:55,588 | INFO     | job.realtimelogging is not enabled
[2026-01-09 23:48:28] 2026-01-10 04:47:56,593 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:48:28] 2026-01-10 04:48:14,201 | INFO     | 3987s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-09 23:48:28] 2026-01-10 04:48:15,283 | INFO     | PID=2828543 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 23:48:28] 2026-01-10 04:48:15,283 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:48:28] 2026-01-10 04:48:15,283 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:48:28] 2026-01-10 04:48:15,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:48:28] 2026-01-10 04:48:22,861 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:48:28] 2026-01-10 04:48:23,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139968949757760)>', '<ExcThread(monitor, started 139968462702336)>']
[2026-01-09 23:48:28] 2026-01-10 04:48:23,324 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:48:28] 2026-01-10 04:48:23,324 | INFO     | [monitor] control thread has ended
[2026-01-09 23:48:28] 2026-01-10 04:48:28,333 | INFO     | all workflow threads have been joined
[2026-01-09 23:48:28] 2026-01-10 04:48:28,333 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:48:28] 2026-01-10 04:48:28,333 | INFO     | traces error code: 0
[2026-01-09 23:48:28] 2026-01-10 04:48:28,333 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:48:28] 2026-01-10 04:48:28,392 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:48:28] 2026-01-10 04:48:28,394 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:48:28] 2026-01-10 04:48:28,395 [wrapper] pilotpid: 2828543
[2026-01-09 23:48:28] 2026-01-10 04:48:28,396 [wrapper] Pilot exit status: 0
[2026-01-09 23:48:28] 2026-01-10 04:48:28,401 [wrapper] pandaids: 6962917827
[2026-01-09 23:48:28] 2026-01-10 04:48:28,414 [wrapper] cleanup supervisor_pilot 2875190 2828544
[2026-01-09 23:48:28] 2026-01-10 04:48:28,416 [wrapper] Test setup, not cleaning
[2026-01-09 23:48:28] 2026-01-10 04:48:28,417 [wrapper] apfmon messages muted
[2026-01-09 23:48:28] 2026-01-10 04:48:28,418 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:48:28] 2026-01-10 04:48:28,420 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:48:28]  *** Error codes and diagnostics ***
[2026-01-09 23:48:28]     "exeErrorCode": 0,
[2026-01-09 23:48:28]     "exeErrorDiag": "",
[2026-01-09 23:48:28]     "pilotErrorCode": 0,
[2026-01-09 23:48:28]     "pilotErrorDiag": "",
[2026-01-09 23:48:28]  *** Listing of results directory ***
[2026-01-09 23:48:28] total 438680
[2026-01-09 23:48:28] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-09 23:48:28] -rwx------. 1 boincer umatlas     36322 Jan  8 03:04 runpilot2-wrapper.sh
[2026-01-09 23:48:28] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:07 queuedata.json
[2026-01-09 23:48:28] -rw-r--r--. 1 boincer umatlas       100 Jan  9 22:41 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:48:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 22:41 run_atlas
[2026-01-09 23:48:28] -rw-r--r--. 1 boincer umatlas       105 Jan  9 22:41 job.xml
[2026-01-09 23:48:28] -rw-r--r--. 2 boincer umatlas 224014914 Jan  9 22:41 EVNT.47898824._000659.pool.root.1
[2026-01-09 23:48:28] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 22:41 start_atlas.sh
[2026-01-09 23:48:28] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 22:41 shared
[2026-01-09 23:48:28] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 22:41 input.tar.gz
[2026-01-09 23:48:28] -rw-r--r--. 1 boincer umatlas         0 Jan  9 22:41 boinc_lockfile
[2026-01-09 23:48:28] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 22:41 pandaJob.out
[2026-01-09 23:48:28] -rw-------. 1 boincer umatlas    989374 Jan  9 22:41 agis_schedconf.cvmfs.json
[2026-01-09 23:48:28] -rw-------. 1 boincer umatlas   1516240 Jan  9 22:41 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:48:28] drwx------. 5 boincer umatlas      4096 Jan  9 22:41 pilot3
[2026-01-09 23:48:28] -rw-r--r--. 1 boincer umatlas      6529 Jan  9 23:36 init_data.xml
[2026-01-09 23:48:28] -rw-------. 1 boincer umatlas 219434545 Jan  9 23:47 HITS.47898826._019907.pool.root.1
[2026-01-09 23:48:28] -rw-r--r--. 1 boincer umatlas       529 Jan  9 23:47 boinc_task_state.xml
[2026-01-09 23:48:28] -rw-------. 1 boincer umatlas      1031 Jan  9 23:47 memory_monitor_summary.json
[2026-01-09 23:48:28] -rw-------. 1 boincer umatlas    328795 Jan  9 23:47 log.47898826._019907.job.log.tgz.1
[2026-01-09 23:48:28] -rw-------. 1 boincer umatlas        95 Jan  9 23:47 pilot_heartbeat.json
[2026-01-09 23:48:28] -rw-------. 1 boincer umatlas      7811 Jan  9 23:47 heartbeat.json
[2026-01-09 23:48:28] -rw-r--r--. 1 boincer umatlas        27 Jan  9 23:48 wrapper_checkpoint.txt
[2026-01-09 23:48:28] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 23:48 boinc_mmap_file
[2026-01-09 23:48:28] -rw-------. 1 boincer umatlas      4935 Jan  9 23:48 pilotlog.txt
[2026-01-09 23:48:28] -rw-------. 1 boincer umatlas    595055 Jan  9 23:48 log.47898826._019907.job.log.1
[2026-01-09 23:48:28] -rw-------. 1 boincer umatlas       357 Jan  9 23:48 output.list
[2026-01-09 23:48:28] -rw-r--r--. 1 boincer umatlas       620 Jan  9 23:48 runtime_log
[2026-01-09 23:48:28] -rw-------. 1 boincer umatlas    942080 Jan  9 23:48 result.tar.gz
[2026-01-09 23:48:28] -rw-r--r--. 1 boincer umatlas      8817 Jan  9 23:48 runtime_log.err
[2026-01-09 23:48:28] -rw-------. 1 boincer umatlas       650 Jan  9 23:48 bWLNDmBB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcUeKDm4Pq9fm.diag
[2026-01-09 23:48:28] -rw-r--r--. 1 boincer umatlas     21798 Jan  9 23:48 stderr.txt
[2026-01-09 23:48:28] HITS file was successfully produced:
[2026-01-09 23:48:28] -rw-------. 1 boincer umatlas 219434545 Jan  9 23:47 shared/HITS.pool.root.1
[2026-01-09 23:48:28]  *** Contents of shared directory: ***
[2026-01-09 23:48:28] total 434580
[2026-01-09 23:48:28] -rw-r--r--. 2 boincer umatlas 224014914 Jan  9 22:41 ATLAS.root_0
[2026-01-09 23:48:28] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 22:41 start_atlas.sh
[2026-01-09 23:48:28] -rw-r--r--. 2 boincer umatlas    592400 Jan  9 22:41 input.tar.gz
[2026-01-09 23:48:28] -rw-------. 1 boincer umatlas 219434545 Jan  9 23:47 HITS.pool.root.1
[2026-01-09 23:48:28] -rw-------. 1 boincer umatlas    942080 Jan  9 23:48 result.tar.gz
23:48:29 (2824836): run_atlas exited; CPU time 32938.069721
23:48:29 (2824836): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN