Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:54:41 (5076): wrapper (7.7.26015): starting
17:54:41 (5076): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 17:54:41] Arguments: --nthreads 12
[2026-01-09 17:54:41] Threads: 12
[2026-01-09 17:54:41] Checking for CVMFS
[2026-01-09 17:54:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:54:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:54:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:54:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:54:41] 2.11.2.0 2979 351682 92676 154959 1 57 12875766 20275200 1 130560 1 147959479 99.956 20317154 16106 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 17:54:41] CVMFS is ok
[2026-01-09 17:54:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:54:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:54:41] Further information can be found at the LHC@home message board.
[2026-01-09 17:54:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:54:41] Checking for apptainer binary...
[2026-01-09 17:54:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:54:41] Running /usr/bin/apptainer --version
[2026-01-09 17:54:41] apptainer version 1.3.2-1.el7
[2026-01-09 17:54:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:54:42] c-205-21.aglt2.org
[2026-01-09 17:54:42] apptainer works
[2026-01-09 17:54:42] Set ATHENA_PROC_NUMBER=12
[2026-01-09 17:54:42] Set ATHENA_CORE_NUMBER=12
[2026-01-09 17:54:42] Starting ATLAS job with PandaID=6963163273
[2026-01-09 17:54:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 19:35:14]  *** The last 200 lines of the pilot log: ***
[2026-01-09 19:35:14]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 19:35:14]  replicas=None
[2026-01-09 19:35:14]  scope=mc23_13p6TeV
[2026-01-09 19:35:14]  status=None
[2026-01-09 19:35:14]  status_code=0
[2026-01-09 19:35:14]  storage_token=
[2026-01-09 19:35:14]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6963163273/log.47898826._034500.job.log.tgz.1
[2026-01-09 19:35:14]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/98/log.47898826._034500.job.log.tgz.1
[2026-01-09 19:35:14]  workdir=None
[2026-01-09 19:35:14] ]
[2026-01-09 19:35:14] 2026-01-10 00:34:11,502 | INFO     | transferring file log.47898826._034500.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6963163273/log.47898826._034500.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 19:35:14] 2026-01-10 00:34:11,503 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6963163273/log.47898826._034500.job.log.tgz.1 /tmp/boinchome/slots/0/log.47898826._034500.job
[2026-01-09 19:35:14] 2026-01-10 00:34:11,523 | INFO     | adding to output.list: log.47898826._034500.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/71/98/log.47898826._034500.job.log.tg
[2026-01-09 19:35:14] 2026-01-10 00:34:11,524 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 19:35:14] 2026-01-10 00:34:11,524 | INFO     | summary of transferred files:
[2026-01-09 19:35:14] 2026-01-10 00:34:11,524 | INFO     |  -- lfn=log.47898826._034500.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 19:35:14] 2026-01-10 00:34:11,525 | INFO     | stage-out finished correctly
[2026-01-09 19:35:14] 2026-01-10 00:34:11,540 | INFO     | time since job start (5953s) is within the limit (349056.0s)
[2026-01-09 19:35:14] 2026-01-10 00:34:13,382 | INFO     | monitor loop #439: job 0:6963163273 is in state 'finished'
[2026-01-09 19:35:14] 2026-01-10 00:34:13,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:35:14] 2026-01-10 00:34:13,546 | INFO     | time since job start (5955s) is within the limit (349056.0s)
[2026-01-09 19:35:14] 2026-01-10 00:34:13,807 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 19:35:14] 2026-01-10 00:34:13,885 | INFO     | job 6963163273 has state=finished
[2026-01-09 19:35:14] 2026-01-10 00:34:13,885 | INFO     | preparing for final server update for job 6963163273 in state='finished'
[2026-01-09 19:35:14] 2026-01-10 00:34:13,886 | INFO     | this job has now completed (state=finished)
[2026-01-09 19:35:14] 2026-01-10 00:34:13,886 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 19:35:14] 2026-01-10 00:34:13,886 | INFO     | log transfer has been attempted: DONE
[2026-01-09 19:35:14] 2026-01-10 00:34:13,887 | INFO     | job 6963163273 has finished - writing final server update
[2026-01-09 19:35:14] 2026-01-10 00:34:13,887 | INFO     | total number of processed events: 400 (read)
[2026-01-09 19:35:14] 2026-01-10 00:34:13,888 | INFO     | executing command: lscpu
[2026-01-09 19:35:14] 2026-01-10 00:34:13,913 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 19:35:14] 2026-01-10 00:34:14,663 | INFO     | PID=8768 has CPU usage=7.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-09 19:35:14] 2026-01-10 00:34:15,663 | INFO     | time since job start (5957s) is within the limit (349056.0s)
[2026-01-09 19:35:14] 2026-01-10 00:34:15,884 | INFO     | monitor loop #440: job 0:6963163273 is in state 'finished'
[2026-01-09 19:35:14] 2026-01-10 00:34:15,885 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:35:14] 2026-01-10 00:34:17,669 | INFO     | time since job start (5959s) is within the limit (349056.0s)
[2026-01-09 19:35:14] 2026-01-10 00:34:18,388 | INFO     | monitor loop #441: job 0:6963163273 is in state 'finished'
[2026-01-09 19:35:14] 2026-01-10 00:34:18,388 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 19:35:14] 2026-01-10 00:34:19,675 | INFO     | time since job start (5961s) is within the limit (349056.0s)
[2026-01-09 19:35:14] 2026-01-10 00:34:19,702 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 19:35:14] 2026-01-10 00:34:19,705 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2026-01-09 19:35:14] 2026-01-10 00:34:19,708 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963163273/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 19:35:14] 2026-01-10 00:34:19,708 | INFO     | extracted standard info from prmon json
[2026-01-09 19:35:14] 2026-01-10 00:34:19,709 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 19:35:14] 2026-01-10 00:34:19,709 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 19:35:14] 2026-01-10 00:34:19,709 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 19:35:14] 2026-01-10 00:34:19,709 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 19:35:14] 2026-01-10 00:34:19,712 | INFO     | fitting pss+swap vs Time
[2026-01-09 19:35:14] 2026-01-10 00:34:19,712 | INFO     | sum of square deviations: 233641590.0
[2026-01-09 19:35:14] 2026-01-10 00:34:19,712 | INFO     | sum of deviations: -6106450871.999999
[2026-01-09 19:35:14] 2026-01-10 00:34:19,712 | INFO     | mean x: 1768002377.0
[2026-01-09 19:35:14] 2026-01-10 00:34:19,712 | INFO     | mean y: 2714365.945054945
[2026-01-09 19:35:14] 2026-01-10 00:34:19,713 | INFO     | intersect: 46211181174.99956
[2026-01-09 19:35:14] 2026-01-10 00:34:19,713 | INFO     | chi2: 0.06130330190151754
[2026-01-09 19:35:14] 2026-01-10 00:34:19,713 | INFO     | current memory leak: -26.14 B/s (using 91 data points, chi2=0.06)
[2026-01-09 19:35:14] 2026-01-10 00:34:19,713 | INFO     | could have reported an average CPU frequency of 2125 MHz (7 samples)
[2026-01-09 19:35:14] 2026-01-10 00:34:19,713 | INFO     | ..............................
[2026-01-09 19:35:14] 2026-01-10 00:34:19,713 | INFO     | . Timing measurements:
[2026-01-09 19:35:14] 2026-01-10 00:34:19,714 | INFO     | . get job = 0 s
[2026-01-09 19:35:14] 2026-01-10 00:34:19,714 | INFO     | . initial setup = 2 s
[2026-01-09 19:35:14] 2026-01-10 00:34:19,714 | INFO     | . payload setup = 7 s
[2026-01-09 19:35:14] 2026-01-10 00:34:19,714 | INFO     | . stage-in = 0 s
[2026-01-09 19:35:14] 2026-01-10 00:34:19,714 | INFO     | . payload execution = 5924 s
[2026-01-09 19:35:14] 2026-01-10 00:34:19,714 | INFO     | . stage-out = 1 s
[2026-01-09 19:35:14] 2026-01-10 00:34:19,714 | INFO     | . log creation = 0 s
[2026-01-09 19:35:14] 2026-01-10 00:34:19,714 | INFO     | ..............................
[2026-01-09 19:35:14] 2026-01-10 00:34:19,795 | INFO     | 
[2026-01-09 19:35:14] 2026-01-10 00:34:19,796 | INFO     | job summary report
[2026-01-09 19:35:14] 2026-01-10 00:34:19,796 | INFO     | --------------------------------------------------
[2026-01-09 19:35:14] 2026-01-10 00:34:19,796 | INFO     | PanDA job id: 6963163273
[2026-01-09 19:35:14] 2026-01-10 00:34:19,796 | INFO     | task id: 47898826
[2026-01-09 19:35:14] 2026-01-10 00:34:19,796 | INFO     | errors: (none)
[2026-01-09 19:35:14] 2026-01-10 00:34:19,796 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 19:35:14] 2026-01-10 00:34:19,797 | INFO     | pilot state: finished 
[2026-01-09 19:35:14] 2026-01-10 00:34:19,797 | INFO     | transexitcode: 0
[2026-01-09 19:35:14] 2026-01-10 00:34:19,797 | INFO     | exeerrorcode: 0
[2026-01-09 19:35:14] 2026-01-10 00:34:19,797 | INFO     | exeerrordiag: 
[2026-01-09 19:35:14] 2026-01-10 00:34:19,797 | INFO     | exitcode: 0
[2026-01-09 19:35:14] 2026-01-10 00:34:19,797 | INFO     | exitmsg: OK
[2026-01-09 19:35:14] 2026-01-10 00:34:19,798 | INFO     | cpuconsumptiontime: 65663 s
[2026-01-09 19:35:14] 2026-01-10 00:34:19,798 | INFO     | nevents: 400
[2026-01-09 19:35:14] 2026-01-10 00:34:19,798 | INFO     | neventsw: 0
[2026-01-09 19:35:14] 2026-01-10 00:34:19,798 | INFO     | pid: 15243
[2026-01-09 19:35:14] 2026-01-10 00:34:19,798 | INFO     | pgrp: 15243
[2026-01-09 19:35:14] 2026-01-10 00:34:19,798 | INFO     | corecount: 12
[2026-01-09 19:35:14] 2026-01-10 00:34:19,798 | INFO     | event service: False
[2026-01-09 19:35:14] 2026-01-10 00:34:19,799 | INFO     | sizes: {0: 2283969, 5: 2284231, 11: 2284287, 5935: 2310982, 5937: 2319980, 5939: 2320036, 5945: 2320358}
[2026-01-09 19:35:14] 2026-01-10 00:34:19,799 | INFO     | --------------------------------------------------
[2026-01-09 19:35:14] 2026-01-10 00:34:19,799 | INFO     | 
[2026-01-09 19:35:14] 2026-01-10 00:34:19,799 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 19:35:14] 2026-01-10 00:34:19,821 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,821 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,821 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,822 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,822 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,824 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,824 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 19:35:14] 2026-01-10 00:34:19,824 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,824 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 19:35:14] 2026-01-10 00:34:19,824 | INFO     | job 6963163273 has completed (purged errors)
[2026-01-09 19:35:14] 2026-01-10 00:34:19,824 | INFO     | overall cleanup function is called
[2026-01-09 19:35:14] 2026-01-10 00:34:20,831 | INFO     | --- collectZombieJob: --- 10, [15243]
[2026-01-09 19:35:14] 2026-01-10 00:34:20,831 | INFO     | zombie collector waiting for pid 15243
[2026-01-09 19:35:14] 2026-01-10 00:34:20,832 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 19:35:14] 2026-01-10 00:34:20,832 | INFO     | collected zombie processes
[2026-01-09 19:35:14] 2026-01-10 00:34:20,832 | INFO     | will attempt to kill all subprocesses of pid=15243
[2026-01-09 19:35:14] 2026-01-10 00:34:20,923 | INFO     | process IDs to be killed: [15243] (in reverse order)
[2026-01-09 19:35:14] 2026-01-10 00:34:20,972 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 19:35:14] 2026-01-10 00:34:20,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 19:35:14] 2026-01-10 00:34:20,976 | INFO     | did not find any defunct processes belonging to 15243
[2026-01-09 19:35:14] 2026-01-10 00:34:20,980 | INFO     | did not find any defunct processes belonging to 15243
[2026-01-09 19:35:14] 2026-01-10 00:34:20,980 | INFO     | ready for new job
[2026-01-09 19:35:14] 2026-01-10 00:34:20,980 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 19:35:14] 2026-01-10 00:34:20,981 | INFO     | ***************************************
[2026-01-09 19:35:14] 2026-01-10 00:34:20,982 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 19:35:14] 2026-01-10 00:34:20,982 | INFO     | ***************************************
[2026-01-09 19:35:14] 2026-01-10 00:34:20,982 | INFO     | 
[2026-01-09 19:35:14] 2026-01-10 00:34:20,982 | INFO     | architecture information:
[2026-01-09 19:35:14] 2026-01-10 00:34:20,983 | INFO     | executing command: cat /etc/os-release
[2026-01-09 19:35:14] 2026-01-10 00:34:20,996 | INFO     | cat /etc/os-release:
[2026-01-09 19:35:14] NAME="CentOS Linux"
[2026-01-09 19:35:14] VERSION="7 (Core)"
[2026-01-09 19:35:14] ID="centos"
[2026-01-09 19:35:14] ID_LIKE="rhel fedora"
[2026-01-09 19:35:14] VERSION_ID="7"
[2026-01-09 19:35:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 19:35:14] ANSI_COLOR="0;31"
[2026-01-09 19:35:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 19:35:14] HOME_URL="https://www.centos.org/"
[2026-01-09 19:35:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 19:35:14] 
[2026-01-09 19:35:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 19:35:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 19:35:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 19:35:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 19:35:14] 
[2026-01-09 19:35:14] 2026-01-10 00:34:20,996 | INFO     | ***************************************
[2026-01-09 19:35:14] 2026-01-10 00:34:21,499 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 19:35:14] 2026-01-10 00:34:21,515 | INFO     | sufficient remaining disk space (29309796352 B)
[2026-01-09 19:35:14] 2026-01-10 00:34:21,515 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 19:35:14] 2026-01-10 00:34:21,515 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 19:35:14] 2026-01-10 00:34:21,516 | INFO     | update_server=False
[2026-01-09 19:35:14] 2026-01-10 00:34:21,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 19:35:14] 2026-01-10 00:34:21,516 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 19:35:14] 2026-01-10 00:34:21,516 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 19:35:14] 2026-01-10 00:34:21,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 19:35:14] 2026-01-10 00:34:21,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 19:35:14] 2026-01-10 00:34:21,517 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:35:14] 2026-01-10 00:34:21,768 | INFO     | all job control threads have been joined
[2026-01-09 19:35:14] 2026-01-10 00:34:21,896 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 19:35:14] 2026-01-10 00:34:21,897 | INFO     | aborting loop
[2026-01-09 19:35:14] 2026-01-10 00:34:22,003 | INFO     | all payload control threads have been joined
[2026-01-09 19:35:14] 2026-01-10 00:34:22,054 | INFO     | all data control threads have been joined
[2026-01-09 19:35:14] 2026-01-10 00:34:22,121 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 19:35:14] 2026-01-10 00:34:22,521 | INFO     | [job] retrieve thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:34:22,522 | INFO     | [job] queue monitor thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:34:22,566 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:34:22,624 | INFO     | [data] copytool_in thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:34:22,773 | INFO     | [job] control thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:34:22,902 | INFO     | [job] job monitor thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:34:23,009 | INFO     | [payload] control thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:34:23,060 | INFO     | [data] control thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:34:23,174 | INFO     | [job] validate thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:34:23,421 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:34:23,438 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:34:23,480 | INFO     | [payload] validate_post thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:34:23,537 | INFO     | [payload] failed_post thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:34:23,695 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:34:24,127 | INFO     | [data] copytool_out thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:34:24,394 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 19:35:14] 2026-01-10 00:34:28,400 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 19:35:14] 2026-01-10 00:35:07,418 | INFO     | [monitor] cgroup control has ended
[2026-01-09 19:35:14] 2026-01-10 00:35:09,138 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139914378745664)>', '<ExcThread(monitor, started 139913710262016)>']
[2026-01-09 19:35:14] 2026-01-10 00:35:09,751 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 19:35:14] 2026-01-10 00:35:09,752 | INFO     | [monitor] control thread has ended
[2026-01-09 19:35:14] 2026-01-10 00:35:14,163 | INFO     | all workflow threads have been joined
[2026-01-09 19:35:14] 2026-01-10 00:35:14,163 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 19:35:14] 2026-01-10 00:35:14,164 | INFO     | traces error code: 0
[2026-01-09 19:35:14] 2026-01-10 00:35:14,164 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 19:35:14] 2026-01-10 00:35:14,253 [wrapper] ==== pilot stdout END ====
[2026-01-09 19:35:14] 2026-01-10 00:35:14,257 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 19:35:14] 2026-01-10 00:35:14,261 [wrapper] pilotpid: 8768
[2026-01-09 19:35:14] 2026-01-10 00:35:14,265 [wrapper] Pilot exit status: 0
[2026-01-09 19:35:14] 2026-01-10 00:35:14,281 [wrapper] pandaids: 6963163273
[2026-01-09 19:35:14] 2026-01-10 00:35:14,330 [wrapper] cleanup supervisor_pilot 14878 8769
[2026-01-09 19:35:14] 2026-01-10 00:35:14,334 [wrapper] Test setup, not cleaning
[2026-01-09 19:35:14] 2026-01-10 00:35:14,338 [wrapper] apfmon messages muted
[2026-01-09 19:35:14] 2026-01-10 00:35:14,342 [wrapper] ==== wrapper stdout END ====
[2026-01-09 19:35:14] 2026-01-10 00:35:14,346 [wrapper] ==== wrapper stderr END ====
[2026-01-09 19:35:14]  *** Error codes and diagnostics ***
[2026-01-09 19:35:14]     "exeErrorCode": 0,
[2026-01-09 19:35:14]     "exeErrorDiag": "",
[2026-01-09 19:35:14]     "pilotErrorCode": 0,
[2026-01-09 19:35:14]     "pilotErrorDiag": "",
[2026-01-09 19:35:14]  *** Listing of results directory ***
[2026-01-09 19:35:14] total 440892
[2026-01-09 19:35:14] -rw-r--r-- 1 boincer umatlas    579449 Jan  8 19:57 pilot3.tar.gz
[2026-01-09 19:35:14] -rwx------ 1 boincer umatlas     36322 Jan  8 19:58 runpilot2-wrapper.sh
[2026-01-09 19:35:14] -rw-r--r-- 1 boincer umatlas      5112 Jan  8 20:02 queuedata.json
[2026-01-09 19:35:14] -rw-r--r-- 1 boincer umatlas       100 Jan  9 17:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 19:35:14] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 17:54 run_atlas
[2026-01-09 19:35:14] -rw-r--r-- 1 boincer umatlas       105 Jan  9 17:54 job.xml
[2026-01-09 19:35:14] -rw-r--r-- 2 boincer umatlas 227147062 Jan  9 17:54 EVNT.47898824._001316.pool.root.1
[2026-01-09 19:35:14] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 17:54 start_atlas.sh
[2026-01-09 19:35:14] drwxrwx--x 2 boincer umatlas      4096 Jan  9 17:54 shared
[2026-01-09 19:35:14] -rw-r--r-- 2 boincer umatlas    592403 Jan  9 17:54 input.tar.gz
[2026-01-09 19:35:14] -rw-r--r-- 1 boincer umatlas         0 Jan  9 17:54 boinc_lockfile
[2026-01-09 19:35:14] -rw-r--r-- 1 boincer umatlas      2519 Jan  9 17:54 pandaJob.out
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas        57 Jan  9 17:54 setup.sh.local
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas    989375 Jan  9 17:54 agis_schedconf.cvmfs.json
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas   1516240 Jan  9 17:54 agis_ddmendpoints.agis.ALL.json
[2026-01-09 19:35:14] drwx------ 5 boincer umatlas      4096 Jan  9 17:54 pilot3
[2026-01-09 19:35:14] -rw-r--r-- 1 boincer umatlas      5953 Jan  9 19:29 init_data.xml
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas 217937777 Jan  9 19:33 HITS.47898826._034500.pool.root.1
[2026-01-09 19:35:14] -rw-r--r-- 1 boincer umatlas       529 Jan  9 19:33 boinc_task_state.xml
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas      1047 Jan  9 19:34 memory_monitor_summary.json
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas    392276 Jan  9 19:34 log.47898826._034500.job.log.tgz.1
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas        95 Jan  9 19:34 pilot_heartbeat.json
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas      7845 Jan  9 19:34 heartbeat.json
[2026-01-09 19:35:14] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 19:35 boinc_mmap_file
[2026-01-09 19:35:14] -rw-r--r-- 1 boincer umatlas        27 Jan  9 19:35 wrapper_checkpoint.txt
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas      4552 Jan  9 19:35 pilotlog.txt
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas    845625 Jan  9 19:35 log.47898826._034500.job.log.1
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas       357 Jan  9 19:35 output.list
[2026-01-09 19:35:14] -rw-r--r-- 1 boincer umatlas       620 Jan  9 19:35 runtime_log
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas   1259520 Jan  9 19:35 result.tar.gz
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas       659 Jan  9 19:35 ua9MDmA1Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmXigKDm8kH2Qn.diag
[2026-01-09 19:35:14] -rw-r--r-- 1 boincer umatlas      9344 Jan  9 19:35 runtime_log.err
[2026-01-09 19:35:14] -rw-r--r-- 1 boincer umatlas     21955 Jan  9 19:35 stderr.txt
[2026-01-09 19:35:14] HITS file was successfully produced:
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas 217937777 Jan  9 19:33 shared/HITS.pool.root.1
[2026-01-09 19:35:14]  *** Contents of shared directory: ***
[2026-01-09 19:35:14] total 436484
[2026-01-09 19:35:14] -rw-r--r-- 2 boincer umatlas 227147062 Jan  9 17:54 ATLAS.root_0
[2026-01-09 19:35:14] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 17:54 start_atlas.sh
[2026-01-09 19:35:14] -rw-r--r-- 2 boincer umatlas    592403 Jan  9 17:54 input.tar.gz
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas 217937777 Jan  9 19:33 HITS.pool.root.1
[2026-01-09 19:35:14] -rw------- 1 boincer umatlas   1259520 Jan  9 19:35 result.tar.gz
19:35:15 (5076): run_atlas exited; CPU time 65648.148188
19:35:15 (5076): called boinc_finish(0)

</stderr_txt>
]]>

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