Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:24:45 (3435948): wrapper (7.7.26015): starting
18:24:45 (3435948): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 18:24:45] Arguments: --nthreads 9
[2026-01-09 18:24:45] Threads: 9
[2026-01-09 18:24:45] Checking for CVMFS
[2026-01-09 18:24:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:24:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:24:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:24:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:24:46] 2.13.3.0 313591 17562 78536 154961 3 97 26921130 37030912 1932 16776704 0 5727479 99.988 553919 56292 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:24:46] CVMFS is ok
[2026-01-09 18:24:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:24:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:24:46] Further information can be found at the LHC@home message board.
[2026-01-09 18:24:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:24:46] Checking for apptainer binary...
[2026-01-09 18:24:46] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:24:46] Running /usr/bin/apptainer --version
[2026-01-09 18:24:46] apptainer version 1.4.5-2.el9
[2026-01-09 18:24:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:24:46] c-205-37.aglt2.org
[2026-01-09 18:24:46] apptainer works
[2026-01-09 18:24:46] Set ATHENA_PROC_NUMBER=9
[2026-01-09 18:24:46] Set ATHENA_CORE_NUMBER=9
[2026-01-09 18:24:46] Starting ATLAS job with PandaID=6962931340
[2026-01-09 18:24:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:18:12]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:18:12] 2026-01-10 01:17:04,801 | INFO     | time since job start (6728s) is within the limit (174528.0s)
[2026-01-09 20:18:12] 2026-01-10 01:17:06,193 | INFO     | monitor loop #505: job 0:6962931340 is in state 'finished'
[2026-01-09 20:18:12] 2026-01-10 01:17:06,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:18:12] 2026-01-10 01:17:06,806 | INFO     | time since job start (6730s) is within the limit (174528.0s)
[2026-01-09 20:18:12] 2026-01-10 01:17:07,756 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 20:18:12] 2026-01-10 01:17:07,763 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2656.5611250000006
[2026-01-09 20:18:12] 2026-01-10 01:17:07,769 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6962931340/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:18:12] 2026-01-10 01:17:07,770 | INFO     | extracted standard info from prmon json
[2026-01-09 20:18:12] 2026-01-10 01:17:07,770 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:18:12] 2026-01-10 01:17:07,770 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:18:12] 2026-01-10 01:17:07,774 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:18:12] 2026-01-10 01:17:07,774 | INFO     | sum of square deviations: 412686807.5
[2026-01-09 20:18:12] 2026-01-10 01:17:07,775 | INFO     | sum of deviations: 3893554238.0
[2026-01-09 20:18:12] 2026-01-10 01:17:07,775 | INFO     | mean x: 1768004443.5
[2026-01-09 20:18:12] 2026-01-10 01:17:07,775 | INFO     | mean y: 2764963.0727272728
[2026-01-09 20:18:12] 2026-01-10 01:17:07,775 | INFO     | intersect: -16677732374.589943
[2026-01-09 20:18:12] 2026-01-10 01:17:07,776 | INFO     | chi2: 3.5398643539056462
[2026-01-09 20:18:12] 2026-01-10 01:17:07,776 | INFO     | sum of square deviations: 358927660.0
[2026-01-09 20:18:12] 2026-01-10 01:17:07,776 | INFO     | sum of deviations: 24353970863.999996
[2026-01-09 20:18:12] 2026-01-10 01:17:07,777 | INFO     | mean x: 1768004291.0
[2026-01-09 20:18:12] 2026-01-10 01:17:07,777 | INFO     | mean y: 2822461.285714286
[2026-01-09 20:18:12] 2026-01-10 01:17:07,777 | INFO     | intersect: -119959860243.19287
[2026-01-09 20:18:12] 2026-01-10 01:17:07,777 | INFO     | chi2: 2.3065314464623468
[2026-01-09 20:18:12] 2026-01-10 01:17:07,777 | INFO     | current chi2=2.3065314464623468 (change=34.841247690254676 %)
[2026-01-09 20:18:12] 2026-01-10 01:17:07,778 | INFO     | sum of square deviations: 310052325.0
[2026-01-09 20:18:12] 2026-01-10 01:17:07,778 | INFO     | sum of deviations: 26913499357.5
[2026-01-09 20:18:12] 2026-01-10 01:17:07,778 | INFO     | mean x: 1768004138.5
[2026-01-09 20:18:12] 2026-01-10 01:17:07,778 | INFO     | mean y: 2830073.07
[2026-01-09 20:18:12] 2026-01-10 01:17:07,779 | INFO     | intersect: -153465389349.4971
[2026-01-09 20:18:12] 2026-01-10 01:17:07,779 | INFO     | chi2: 2.2108667942837164
[2026-01-09 20:18:12] 2026-01-10 01:17:07,779 | INFO     | current chi2=2.2108667942837164 (change=4.147554646408854 %)
[2026-01-09 20:18:12] 2026-01-10 01:17:07,779 | INFO     | right removable region: 99
[2026-01-09 20:18:12] 2026-01-10 01:17:07,779 | INFO     | sum of square deviations: 358927660.0
[2026-01-09 20:18:12] 2026-01-10 01:17:07,780 | INFO     | sum of deviations: -21892081502.0
[2026-01-09 20:18:12] 2026-01-10 01:17:07,780 | INFO     | mean x: 1768004596.0
[2026-01-09 20:18:12] 2026-01-10 01:17:07,780 | INFO     | mean y: 2837147.8952380954
[2026-01-09 20:18:12] 2026-01-10 01:17:07,780 | INFO     | intersect: 107838774650.01636
[2026-01-09 20:18:12] 2026-01-10 01:17:07,781 | INFO     | chi2: 1.3911835641169656
[2026-01-09 20:18:12] 2026-01-10 01:17:07,781 | INFO     | current chi2=1.3911835641169656 (change=60.69952334241202 %)
[2026-01-09 20:18:12] 2026-01-10 01:17:07,781 | INFO     | sum of square deviations: 310052325.0
[2026-01-09 20:18:12] 2026-01-10 01:17:07,782 | INFO     | sum of deviations: -24641835872.500004
[2026-01-09 20:18:12] 2026-01-10 01:17:07,782 | INFO     | mean x: 1768004748.5
[2026-01-09 20:18:12] 2026-01-10 01:17:07,782 | INFO     | mean y: 2845657.11
[2026-01-09 20:18:12] 2026-01-10 01:17:07,782 | INFO     | intersect: 140517459873.7189
[2026-01-09 20:18:12] 2026-01-10 01:17:07,782 | INFO     | chi2: 1.324038006212022
[2026-01-09 20:18:12] 2026-01-10 01:17:07,783 | INFO     | current chi2=1.324038006212022 (change=4.82650597928558 %)
[2026-01-09 20:18:12] 2026-01-10 01:17:07,783 | INFO     | left removable region: 20
[2026-01-09 20:18:12] 2026-01-10 01:17:07,783 | INFO     | sum of square deviations: 152858680.0
[2026-01-09 20:18:12] 2026-01-10 01:17:07,783 | INFO     | sum of deviations: -2651977257.0
[2026-01-09 20:18:12] 2026-01-10 01:17:07,784 | INFO     | mean x: 1768004718.0
[2026-01-09 20:18:12] 2026-01-10 01:17:07,784 | INFO     | mean y: 2933346.3924050634
[2026-01-09 20:18:12] 2026-01-10 01:17:07,784 | INFO     | intersect: 30676417524.096275
[2026-01-09 20:18:12] 2026-01-10 01:17:07,784 | INFO     | chi2: 0.01932495737199256
[2026-01-09 20:18:12] 2026-01-10 01:17:07,784 | INFO     | current memory leak: -17.35 B/s (using 79 data points, chi2=0.02)
[2026-01-09 20:18:12] 2026-01-10 01:17:07,785 | INFO     | could have reported an average CPU frequency of 2624 MHz (7 samples)
[2026-01-09 20:18:12] 2026-01-10 01:17:07,785 | INFO     | ..............................
[2026-01-09 20:18:12] 2026-01-10 01:17:07,785 | INFO     | . Timing measurements:
[2026-01-09 20:18:12] 2026-01-10 01:17:07,785 | INFO     | . get job = 0 s
[2026-01-09 20:18:12] 2026-01-10 01:17:07,785 | INFO     | . initial setup = 2 s
[2026-01-09 20:18:12] 2026-01-10 01:17:07,785 | INFO     | . payload setup = 4 s
[2026-01-09 20:18:12] 2026-01-10 01:17:07,786 | INFO     | . stage-in = 0 s
[2026-01-09 20:18:12] 2026-01-10 01:17:07,786 | INFO     | . payload execution = 6699 s
[2026-01-09 20:18:12] 2026-01-10 01:17:07,786 | INFO     | . stage-out = 1 s
[2026-01-09 20:18:12] 2026-01-10 01:17:07,786 | INFO     | . log creation = 0 s
[2026-01-09 20:18:12] 2026-01-10 01:17:07,786 | INFO     | ..............................
[2026-01-09 20:18:12] 2026-01-10 01:17:08,124 | INFO     | 
[2026-01-09 20:18:12] 2026-01-10 01:17:08,124 | INFO     | job summary report
[2026-01-09 20:18:12] 2026-01-10 01:17:08,124 | INFO     | --------------------------------------------------
[2026-01-09 20:18:12] 2026-01-10 01:17:08,124 | INFO     | PanDA job id: 6962931340
[2026-01-09 20:18:12] 2026-01-10 01:17:08,124 | INFO     | task id: 47961985
[2026-01-09 20:18:12] 2026-01-10 01:17:08,124 | INFO     | errors: (none)
[2026-01-09 20:18:12] 2026-01-10 01:17:08,124 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:18:12] 2026-01-10 01:17:08,125 | INFO     | pilot state: finished 
[2026-01-09 20:18:12] 2026-01-10 01:17:08,125 | INFO     | transexitcode: 0
[2026-01-09 20:18:12] 2026-01-10 01:17:08,125 | INFO     | exeerrorcode: 0
[2026-01-09 20:18:12] 2026-01-10 01:17:08,125 | INFO     | exeerrordiag: 
[2026-01-09 20:18:12] 2026-01-10 01:17:08,125 | INFO     | exitcode: 0
[2026-01-09 20:18:12] 2026-01-10 01:17:08,125 | INFO     | exitmsg: OK
[2026-01-09 20:18:12] 2026-01-10 01:17:08,125 | INFO     | cpuconsumptiontime: 55717 s
[2026-01-09 20:18:12] 2026-01-10 01:17:08,125 | INFO     | nevents: 150
[2026-01-09 20:18:12] 2026-01-10 01:17:08,125 | INFO     | neventsw: 0
[2026-01-09 20:18:12] 2026-01-10 01:17:08,126 | INFO     | pid: 3446197
[2026-01-09 20:18:12] 2026-01-10 01:17:08,126 | INFO     | pgrp: 3446197
[2026-01-09 20:18:12] 2026-01-10 01:17:08,126 | INFO     | corecount: 9
[2026-01-09 20:18:12] 2026-01-10 01:17:08,126 | INFO     | event service: False
[2026-01-09 20:18:12] 2026-01-10 01:17:08,126 | INFO     | sizes: {0: 2284548, 4: 2284810, 11: 2284838, 6707: 2312791, 6710: 2321785, 6711: 2321841, 6717: 2322215}
[2026-01-09 20:18:12] 2026-01-10 01:17:08,126 | INFO     | --------------------------------------------------
[2026-01-09 20:18:12] 2026-01-10 01:17:08,126 | INFO     | 
[2026-01-09 20:18:12] 2026-01-10 01:17:08,126 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 20:18:12] 2026-01-10 01:17:08,143 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,143 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,143 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,143 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,143 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,144 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,144 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,144 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,144 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,144 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,144 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,144 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,145 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,145 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,145 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,145 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,145 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,145 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:18:12] 2026-01-10 01:17:08,145 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,145 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:18:12] 2026-01-10 01:17:08,146 | INFO     | job 6962931340 has completed (purged errors)
[2026-01-09 20:18:12] 2026-01-10 01:17:08,146 | INFO     | overall cleanup function is called
[2026-01-09 20:18:12] 2026-01-10 01:17:09,162 | INFO     | --- collectZombieJob: --- 10, [3446197]
[2026-01-09 20:18:12] 2026-01-10 01:17:09,162 | INFO     | zombie collector waiting for pid 3446197
[2026-01-09 20:18:12] 2026-01-10 01:17:09,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:18:12] 2026-01-10 01:17:09,163 | INFO     | collected zombie processes
[2026-01-09 20:18:12] 2026-01-10 01:17:09,163 | INFO     | will attempt to kill all subprocesses of pid=3446197
[2026-01-09 20:18:12] 2026-01-10 01:17:09,359 | INFO     | process IDs to be killed: [3446197] (in reverse order)
[2026-01-09 20:18:12] 2026-01-10 01:17:09,416 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:18:12] 2026-01-10 01:17:09,416 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:18:12] 2026-01-10 01:17:09,422 | INFO     | did not find any defunct processes belonging to 3446197
[2026-01-09 20:18:12] 2026-01-10 01:17:09,427 | INFO     | did not find any defunct processes belonging to 3446197
[2026-01-09 20:18:12] 2026-01-10 01:17:09,427 | INFO     | ready for new job
[2026-01-09 20:18:12] 2026-01-10 01:17:09,428 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:18:12] 2026-01-10 01:17:09,430 | INFO     | ***************************************
[2026-01-09 20:18:12] 2026-01-10 01:17:09,430 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:18:12] 2026-01-10 01:17:09,430 | INFO     | ***************************************
[2026-01-09 20:18:12] 2026-01-10 01:17:09,430 | INFO     | 
[2026-01-09 20:18:12] 2026-01-10 01:17:09,432 | INFO     | architecture information:
[2026-01-09 20:18:12] 2026-01-10 01:17:09,433 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:18:12] 2026-01-10 01:17:09,446 | INFO     | cat /etc/os-release:
[2026-01-09 20:18:12] NAME="CentOS Linux"
[2026-01-09 20:18:12] VERSION="7 (Core)"
[2026-01-09 20:18:12] ID="centos"
[2026-01-09 20:18:12] ID_LIKE="rhel fedora"
[2026-01-09 20:18:12] VERSION_ID="7"
[2026-01-09 20:18:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:18:12] ANSI_COLOR="0;31"
[2026-01-09 20:18:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:18:12] HOME_URL="https://www.centos.org/"
[2026-01-09 20:18:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:18:12] 
[2026-01-09 20:18:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:18:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:18:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:18:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:18:12] 
[2026-01-09 20:18:12] 2026-01-10 01:17:09,446 | INFO     | ***************************************
[2026-01-09 20:18:12] 2026-01-10 01:17:09,949 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 20:18:12] 2026-01-10 01:17:09,964 | INFO     | sufficient remaining disk space (39774584832 B)
[2026-01-09 20:18:12] 2026-01-10 01:17:09,964 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:18:12] 2026-01-10 01:17:09,964 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:18:12] 2026-01-10 01:17:09,965 | INFO     | update_server=False
[2026-01-09 20:18:12] 2026-01-10 01:17:09,965 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:18:12] 2026-01-10 01:17:09,965 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:18:12] 2026-01-10 01:17:09,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:18:12] 2026-01-10 01:17:09,965 | INFO     | aborting loop
[2026-01-09 20:18:12] 2026-01-10 01:17:10,191 | INFO     | all payload control threads have been joined
[2026-01-09 20:18:12] 2026-01-10 01:17:10,224 | INFO     | all job control threads have been joined
[2026-01-09 20:18:12] 2026-01-10 01:17:10,970 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:10,971 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:10,983 | INFO     | all data control threads have been joined
[2026-01-09 20:18:12] 2026-01-10 01:17:11,159 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:11,197 | INFO     | [payload] control thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:11,229 | INFO     | [job] control thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:11,467 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:11,765 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:11,890 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:11,971 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:11,982 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:11,988 | INFO     | [data] control thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:12,206 | INFO     | [job] validate thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:12,372 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:12,465 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:12,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:18:12] 2026-01-10 01:17:12,904 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:18:12] 2026-01-10 01:17:13,910 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:16,618 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:18:12] 2026-01-10 01:17:40,130 | INFO     | PID=3439652 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 20:18:12] 2026-01-10 01:17:40,130 | INFO     | .. there are 3 such processes running
[2026-01-09 20:18:12] 2026-01-10 01:17:40,131 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:18:12] 2026-01-10 01:17:40,131 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:18:12] 2026-01-10 01:17:40,131 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:18:12] 2026-01-10 01:18:06,846 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:18:12] 2026-01-10 01:18:07,167 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140002955360064)>', '<ExcThread(monitor, started 140002595936000)>']
[2026-01-09 20:18:12] 2026-01-10 01:18:07,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:18:12] 2026-01-10 01:18:07,267 | INFO     | [monitor] control thread has ended
[2026-01-09 20:18:12] 2026-01-10 01:18:12,192 | INFO     | all workflow threads have been joined
[2026-01-09 20:18:12] 2026-01-10 01:18:12,192 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:18:12] 2026-01-10 01:18:12,193 | INFO     | traces error code: 0
[2026-01-09 20:18:12] 2026-01-10 01:18:12,193 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:18:12] 2026-01-10 01:18:12,319 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:18:12] 2026-01-10 01:18:12,321 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:18:12] 2026-01-10 01:18:12,324 [wrapper] pilotpid: 3439652
[2026-01-09 20:18:12] 2026-01-10 01:18:12,326 [wrapper] Pilot exit status: 0
[2026-01-09 20:18:12] 2026-01-10 01:18:12,335 [wrapper] pandaids: 6962931340
[2026-01-09 20:18:12] 2026-01-10 01:18:12,373 [wrapper] cleanup supervisor_pilot 3529411 3439653
[2026-01-09 20:18:12] 2026-01-10 01:18:12,375 [wrapper] Test setup, not cleaning
[2026-01-09 20:18:12] 2026-01-10 01:18:12,377 [wrapper] apfmon messages muted
[2026-01-09 20:18:12] 2026-01-10 01:18:12,379 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:18:12] 2026-01-10 01:18:12,382 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:18:12]  *** Error codes and diagnostics ***
[2026-01-09 20:18:12]     "exeErrorCode": 0,
[2026-01-09 20:18:12]     "exeErrorDiag": "",
[2026-01-09 20:18:12]     "pilotErrorCode": 0,
[2026-01-09 20:18:12]     "pilotErrorDiag": "",
[2026-01-09 20:18:12]  *** Listing of results directory ***
[2026-01-09 20:18:12] total 556920
[2026-01-09 20:18:12] -rwx------. 1 boincer umatlas     36322 Jan  8 03:17 runpilot2-wrapper.sh
[2026-01-09 20:18:12] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 03:23 pilot3.tar.gz
[2026-01-09 20:18:12] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:27 queuedata.json
[2026-01-09 20:18:12] -rw-r--r--. 1 boincer umatlas       100 Jan  9 18:24 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:18:12] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 18:24 run_atlas
[2026-01-09 20:18:12] -rw-r--r--. 1 boincer umatlas       105 Jan  9 18:24 job.xml
[2026-01-09 20:18:12] -rw-r--r--. 2 boincer umatlas 414901083 Jan  9 18:24 EVNT.47961981._000022.pool.root.1
[2026-01-09 20:18:12] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:24 start_atlas.sh
[2026-01-09 20:18:12] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 18:24 shared
[2026-01-09 20:18:12] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 18:24 input.tar.gz
[2026-01-09 20:18:12] -rw-r--r--. 1 boincer umatlas         0 Jan  9 18:24 boinc_lockfile
[2026-01-09 20:18:12] -rw-r--r--. 1 boincer umatlas      2875 Jan  9 18:24 pandaJob.out
[2026-01-09 20:18:12] -rw-------. 1 boincer umatlas    989374 Jan  9 18:24 agis_schedconf.cvmfs.json
[2026-01-09 20:18:12] -rw-------. 1 boincer umatlas   1516240 Jan  9 18:24 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:18:12] drwx------. 5 boincer umatlas      4096 Jan  9 18:24 pilot3
[2026-01-09 20:18:12] -rw-r--r--. 1 boincer umatlas       529 Jan  9 20:08 boinc_task_state.xml
[2026-01-09 20:18:12] -rw-r--r--. 1 boincer umatlas      6529 Jan  9 20:09 init_data.xml
[2026-01-09 20:18:12] -rw-------. 1 boincer umatlas 146753971 Jan  9 20:16 HITS.47961985._000472.pool.root.1
[2026-01-09 20:18:12] -rw-------. 1 boincer umatlas      1033 Jan  9 20:16 memory_monitor_summary.json
[2026-01-09 20:18:12] -rw-------. 1 boincer umatlas   1362394 Jan  9 20:17 log.47961985._000472.job.log.tgz.1
[2026-01-09 20:18:12] -rw-------. 1 boincer umatlas      8590 Jan  9 20:17 heartbeat.json
[2026-01-09 20:18:12] -rw-------. 1 boincer umatlas        95 Jan  9 20:17 pilot_heartbeat.json
[2026-01-09 20:18:12] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 20:18 boinc_mmap_file
[2026-01-09 20:18:12] -rw-r--r--. 1 boincer umatlas        27 Jan  9 20:18 wrapper_checkpoint.txt
[2026-01-09 20:18:12] -rw-------. 1 boincer umatlas      4823 Jan  9 20:18 pilotlog.txt
[2026-01-09 20:18:12] -rw-------. 1 boincer umatlas    998194 Jan  9 20:18 log.47961985._000472.job.log.1
[2026-01-09 20:18:12] -rw-------. 1 boincer umatlas       353 Jan  9 20:18 output.list
[2026-01-09 20:18:12] -rw-r--r--. 1 boincer umatlas       620 Jan  9 20:18 runtime_log
[2026-01-09 20:18:12] -rw-------. 1 boincer umatlas   2375680 Jan  9 20:18 result.tar.gz
[2026-01-09 20:18:12] -rw-------. 1 boincer umatlas       652 Jan  9 20:18 XRdMDmQO0x8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmj2jKDm8b1qin.diag
[2026-01-09 20:18:12] -rw-r--r--. 1 boincer umatlas      8817 Jan  9 20:18 runtime_log.err
[2026-01-09 20:18:12] -rw-r--r--. 1 boincer umatlas     21107 Jan  9 20:18 stderr.txt
[2026-01-09 20:18:12] HITS file was successfully produced:
[2026-01-09 20:18:12] -rw-------. 1 boincer umatlas 146753971 Jan  9 20:16 shared/HITS.pool.root.1
[2026-01-09 20:18:12]  *** Contents of shared directory: ***
[2026-01-09 20:18:12] total 551416
[2026-01-09 20:18:12] -rw-r--r--. 2 boincer umatlas 414901083 Jan  9 18:24 ATLAS.root_0
[2026-01-09 20:18:12] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:24 start_atlas.sh
[2026-01-09 20:18:12] -rw-r--r--. 2 boincer umatlas    592611 Jan  9 18:24 input.tar.gz
[2026-01-09 20:18:12] -rw-------. 1 boincer umatlas 146753971 Jan  9 20:16 HITS.pool.root.1
[2026-01-09 20:18:12] -rw-------. 1 boincer umatlas   2375680 Jan  9 20:18 result.tar.gz
20:18:13 (3435948): run_atlas exited; CPU time 55771.444342
20:18:13 (3435948): called boinc_finish(0)

</stderr_txt>
]]>

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