Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:30:50 (2646620): wrapper (7.7.26015): starting
19:30:50 (2646620): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:30:50] Arguments: --nthreads 8
[2026-01-09 19:30:50] Threads: 8
[2026-01-09 19:30:50] Checking for CVMFS
[2026-01-09 19:30:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:30:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:30:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:30:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:30:51] 2.13.3.0 9438 94110 133816 154962 0 73 29440703 40960001 31960 16776704 0 1221049605 99.736 870043497 48081 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 19:30:51] CVMFS is ok
[2026-01-09 19:30:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:30:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:30:51] Further information can be found at the LHC@home message board.
[2026-01-09 19:30:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:30:51] Checking for apptainer binary...
[2026-01-09 19:30:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:30:51] Running /usr/bin/apptainer --version
[2026-01-09 19:30:51] apptainer version 1.4.5-2.el9
[2026-01-09 19:30:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:30:52] c8-7-3.aglt2.org
[2026-01-09 19:30:52] apptainer works
[2026-01-09 19:30:52] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:30:52] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:30:52] Starting ATLAS job with PandaID=6962916442
[2026-01-09 19:30:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:12:01]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:12:01] 2026-01-10 02:10:41,508 | INFO     | monitor loop #408: job 0:6962916442 is in state 'finished'
[2026-01-09 21:12:01] 2026-01-10 02:10:41,508 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:12:01] 2026-01-10 02:10:41,694 | INFO     | time since job start (5939s) is within the limit (174528.0s)
[2026-01-09 21:12:01] 2026-01-10 02:10:43,701 | INFO     | time since job start (5941s) is within the limit (174528.0s)
[2026-01-09 21:12:01] 2026-01-10 02:10:44,013 | INFO     | monitor loop #409: job 0:6962916442 is in state 'finished'
[2026-01-09 21:12:01] 2026-01-10 02:10:44,013 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:12:01] 2026-01-10 02:10:45,708 | INFO     | time since job start (5943s) is within the limit (174528.0s)
[2026-01-09 21:12:01] 2026-01-10 02:10:46,518 | INFO     | monitor loop #410: job 0:6962916442 is in state 'finished'
[2026-01-09 21:12:01] 2026-01-10 02:10:46,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:12:01] 2026-01-10 02:10:47,863 | INFO     | PID=2651015 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:12:01] 2026-01-10 02:10:47,865 | INFO     | .. there are 25 such processes running
[2026-01-09 21:12:01] 2026-01-10 02:10:48,866 | INFO     | time since job start (5946s) is within the limit (174528.0s)
[2026-01-09 21:12:01] 2026-01-10 02:10:49,035 | INFO     | monitor loop #411: job 0:6962916442 is in state 'finished'
[2026-01-09 21:12:01] 2026-01-10 02:10:49,035 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:12:01] 2026-01-10 02:10:50,873 | INFO     | time since job start (5948s) is within the limit (174528.0s)
[2026-01-09 21:12:01] 2026-01-10 02:10:51,543 | INFO     | monitor loop #412: job 0:6962916442 is in state 'finished'
[2026-01-09 21:12:01] 2026-01-10 02:10:51,543 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:12:01] 2026-01-10 02:10:52,884 | INFO     | time since job start (5950s) is within the limit (174528.0s)
[2026-01-09 21:12:01] 2026-01-10 02:10:54,050 | INFO     | monitor loop #413: job 0:6962916442 is in state 'finished'
[2026-01-09 21:12:01] 2026-01-10 02:10:54,050 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:12:01] 2026-01-10 02:10:54,891 | INFO     | time since job start (5952s) is within the limit (174528.0s)
[2026-01-09 21:12:01] 2026-01-10 02:10:56,554 | INFO     | monitor loop #414: job 0:6962916442 is in state 'finished'
[2026-01-09 21:12:01] 2026-01-10 02:10:56,555 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:12:01] 2026-01-10 02:10:56,898 | INFO     | time since job start (5954s) is within the limit (174528.0s)
[2026-01-09 21:12:01] 2026-01-10 02:10:58,904 | INFO     | time since job start (5956s) is within the limit (174528.0s)
[2026-01-09 21:12:01] 2026-01-10 02:10:59,070 | INFO     | monitor loop #415: job 0:6962916442 is in state 'finished'
[2026-01-09 21:12:01] 2026-01-10 02:10:59,070 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:12:01] 2026-01-10 02:11:00,913 | INFO     | time since job start (5958s) is within the limit (174528.0s)
[2026-01-09 21:12:01] 2026-01-10 02:11:01,575 | INFO     | monitor loop #416: job 0:6962916442 is in state 'finished'
[2026-01-09 21:12:01] 2026-01-10 02:11:01,575 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:12:01] 2026-01-10 02:11:02,920 | INFO     | time since job start (5960s) is within the limit (174528.0s)
[2026-01-09 21:12:01] 2026-01-10 02:11:04,080 | INFO     | monitor loop #417: job 0:6962916442 is in state 'finished'
[2026-01-09 21:12:01] 2026-01-10 02:11:04,080 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:12:01] 2026-01-10 02:11:04,929 | INFO     | time since job start (5962s) is within the limit (174528.0s)
[2026-01-09 21:12:01] 2026-01-10 02:11:06,598 | INFO     | monitor loop #418: job 0:6962916442 is in state 'finished'
[2026-01-09 21:12:01] 2026-01-10 02:11:06,598 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:12:01] 2026-01-10 02:11:06,957 | INFO     | time since job start (5964s) is within the limit (174528.0s)
[2026-01-09 21:12:01] 2026-01-10 02:11:07,036 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 21:12:01] 2026-01-10 02:11:07,060 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.127296875
[2026-01-09 21:12:01] 2026-01-10 02:11:07,111 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6962916442/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:12:01] 2026-01-10 02:11:07,112 | INFO     | extracted standard info from prmon json
[2026-01-09 21:12:01] 2026-01-10 02:11:07,112 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:12:01] 2026-01-10 02:11:07,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:12:01] 2026-01-10 02:11:07,112 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:12:01] 2026-01-10 02:11:07,112 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:12:01] 2026-01-10 02:11:07,117 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:12:01] 2026-01-10 02:11:07,118 | INFO     | sum of square deviations: 218581331.97752804
[2026-01-09 21:12:01] 2026-01-10 02:11:07,118 | INFO     | sum of deviations: -794053045.3483136
[2026-01-09 21:12:01] 2026-01-10 02:11:07,118 | INFO     | mean x: 1768008182.2808988
[2026-01-09 21:12:01] 2026-01-10 02:11:07,118 | INFO     | mean y: 2561933.853932584
[2026-01-09 21:12:01] 2026-01-10 02:11:07,118 | INFO     | intersect: 6425307502.470083
[2026-01-09 21:12:01] 2026-01-10 02:11:07,118 | INFO     | chi2: 1.1285962623422454
[2026-01-09 21:12:01] 2026-01-10 02:11:07,118 | INFO     | current memory leak: -3.63 B/s (using 89 data points, chi2=1.13)
[2026-01-09 21:12:01] 2026-01-10 02:11:07,119 | INFO     | could have reported an average CPU frequency of 3799 MHz (7 samples)
[2026-01-09 21:12:01] 2026-01-10 02:11:07,119 | INFO     | ..............................
[2026-01-09 21:12:01] 2026-01-10 02:11:07,119 | INFO     | . Timing measurements:
[2026-01-09 21:12:01] 2026-01-10 02:11:07,119 | INFO     | . get job = 0 s
[2026-01-09 21:12:01] 2026-01-10 02:11:07,119 | INFO     | . initial setup = 6 s
[2026-01-09 21:12:01] 2026-01-10 02:11:07,119 | INFO     | . payload setup = 33 s
[2026-01-09 21:12:01] 2026-01-10 02:11:07,119 | INFO     | . stage-in = 0 s
[2026-01-09 21:12:01] 2026-01-10 02:11:07,119 | INFO     | . payload execution = 5851 s
[2026-01-09 21:12:01] 2026-01-10 02:11:07,119 | INFO     | . stage-out = 2 s
[2026-01-09 21:12:01] 2026-01-10 02:11:07,119 | INFO     | . log creation = 0 s
[2026-01-09 21:12:01] 2026-01-10 02:11:07,119 | INFO     | ..............................
[2026-01-09 21:12:01] 2026-01-10 02:11:07,727 | INFO     | 
[2026-01-09 21:12:01] 2026-01-10 02:11:07,727 | INFO     | job summary report
[2026-01-09 21:12:01] 2026-01-10 02:11:07,727 | INFO     | --------------------------------------------------
[2026-01-09 21:12:01] 2026-01-10 02:11:07,727 | INFO     | PanDA job id: 6962916442
[2026-01-09 21:12:01] 2026-01-10 02:11:07,727 | INFO     | task id: 47898826
[2026-01-09 21:12:01] 2026-01-10 02:11:07,727 | INFO     | errors: (none)
[2026-01-09 21:12:01] 2026-01-10 02:11:07,727 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:12:01] 2026-01-10 02:11:07,727 | INFO     | pilot state: finished 
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | transexitcode: 0
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | exeerrorcode: 0
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | exeerrordiag: 
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | exitcode: 0
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | exitmsg: OK
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | cpuconsumptiontime: 31732 s
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | nevents: 400
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | neventsw: 0
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | pid: 2664633
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | pgrp: 2664633
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | corecount: 8
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | event service: False
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | sizes: {0: 2283741, 1: 2283996, 12: 2283996, 18: 2284286, 23: 2284314, 5889: 2311245, 5891: 2320243, 5895: 2320299, 5925: 2320493}
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | --------------------------------------------------
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | 
[2026-01-09 21:12:01] 2026-01-10 02:11:07,729 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-09 21:12:01] 2026-01-10 02:11:07,785 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,785 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,785 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,785 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,785 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,785 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,785 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,785 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,785 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,785 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,786 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,786 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,786 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:12:01] 2026-01-10 02:11:07,786 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,786 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:12:01] 2026-01-10 02:11:07,786 | INFO     | job 6962916442 has completed (purged errors)
[2026-01-09 21:12:01] 2026-01-10 02:11:07,786 | INFO     | overall cleanup function is called
[2026-01-09 21:12:01] 2026-01-10 02:11:08,794 | INFO     | --- collectZombieJob: --- 10, [2664633]
[2026-01-09 21:12:01] 2026-01-10 02:11:08,794 | INFO     | zombie collector waiting for pid 2664633
[2026-01-09 21:12:01] 2026-01-10 02:11:08,794 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:12:01] 2026-01-10 02:11:08,794 | INFO     | collected zombie processes
[2026-01-09 21:12:01] 2026-01-10 02:11:08,794 | INFO     | will attempt to kill all subprocesses of pid=2664633
[2026-01-09 21:12:01] 2026-01-10 02:11:09,906 | INFO     | process IDs to be killed: [2664633] (in reverse order)
[2026-01-09 21:12:01] 2026-01-10 02:11:10,083 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:12:01] 2026-01-10 02:11:10,083 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:12:01] 2026-01-10 02:11:10,164 | INFO     | did not find any defunct processes belonging to 2664633
[2026-01-09 21:12:01] 2026-01-10 02:11:10,212 | INFO     | did not find any defunct processes belonging to 2664633
[2026-01-09 21:12:01] 2026-01-10 02:11:10,212 | INFO     | ready for new job
[2026-01-09 21:12:01] 2026-01-10 02:11:10,212 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:12:01] 2026-01-10 02:11:10,213 | INFO     | ***************************************
[2026-01-09 21:12:01] 2026-01-10 02:11:10,214 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:12:01] 2026-01-10 02:11:10,216 | INFO     | ***************************************
[2026-01-09 21:12:01] 2026-01-10 02:11:10,216 | INFO     | 
[2026-01-09 21:12:01] 2026-01-10 02:11:10,225 | INFO     | architecture information:
[2026-01-09 21:12:01] 2026-01-10 02:11:10,226 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:12:01] 2026-01-10 02:11:10,332 | INFO     | cat /etc/os-release:
[2026-01-09 21:12:01] NAME="CentOS Linux"
[2026-01-09 21:12:01] VERSION="7 (Core)"
[2026-01-09 21:12:01] ID="centos"
[2026-01-09 21:12:01] ID_LIKE="rhel fedora"
[2026-01-09 21:12:01] VERSION_ID="7"
[2026-01-09 21:12:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:12:01] ANSI_COLOR="0;31"
[2026-01-09 21:12:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:12:01] HOME_URL="https://www.centos.org/"
[2026-01-09 21:12:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:12:01] 
[2026-01-09 21:12:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:12:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:12:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:12:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:12:01] 
[2026-01-09 21:12:01] 2026-01-10 02:11:10,332 | INFO     | ***************************************
[2026-01-09 21:12:01] 2026-01-10 02:11:10,836 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-09 21:12:01] 2026-01-10 02:11:10,886 | INFO     | sufficient remaining disk space (168225144832 B)
[2026-01-09 21:12:01] 2026-01-10 02:11:10,886 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:12:01] 2026-01-10 02:11:10,887 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:12:01] 2026-01-10 02:11:10,887 | INFO     | update_server=False
[2026-01-09 21:12:01] 2026-01-10 02:11:10,887 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:12:01] 2026-01-10 02:11:10,887 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:12:01] 2026-01-10 02:11:10,887 | INFO     | aborting loop
[2026-01-09 21:12:01] 2026-01-10 02:11:11,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:12:01] 2026-01-10 02:11:11,581 | INFO     | all data control threads have been joined
[2026-01-09 21:12:01] 2026-01-10 02:11:11,893 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:11,893 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:12,155 | INFO     | [job] validate thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:12,362 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:12:01] 2026-01-10 02:11:12,406 | INFO     | all payload control threads have been joined
[2026-01-09 21:12:01] 2026-01-10 02:11:12,459 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:12,527 | INFO     | all job control threads have been joined
[2026-01-09 21:12:01] 2026-01-10 02:11:12,587 | INFO     | [data] control thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:12,879 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:12,915 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:13,289 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:13,343 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:13,368 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:13,372 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:13,412 | INFO     | [payload] control thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:13,523 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:13,533 | INFO     | [job] control thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:14,353 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:12:01] 2026-01-10 02:11:18,362 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:21,671 | INFO     | job.realtimelogging is not enabled
[2026-01-09 21:12:01] 2026-01-10 02:11:22,676 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:12:01] 2026-01-10 02:11:42,406 | INFO     | PID=2651015 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:12:01] 2026-01-10 02:11:42,421 | INFO     | .. there are 25 such processes running
[2026-01-09 21:12:01] 2026-01-10 02:11:42,421 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:12:01] 2026-01-10 02:11:42,421 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:12:01] 2026-01-10 02:11:42,421 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:12:01] 2026-01-10 02:11:51,872 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:12:01] 2026-01-10 02:11:53,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140283892991808)>', '<ExcThread(monitor, started 140283530426112)>']
[2026-01-09 21:12:01] 2026-01-10 02:11:54,497 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:12:01] 2026-01-10 02:11:54,497 | INFO     | [monitor] control thread has ended
[2026-01-09 21:12:01] 2026-01-10 02:11:58,986 | INFO     | all workflow threads have been joined
[2026-01-09 21:12:01] 2026-01-10 02:11:58,986 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:12:01] 2026-01-10 02:11:58,986 | INFO     | traces error code: 0
[2026-01-09 21:12:01] 2026-01-10 02:11:58,986 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:12:01] 2026-01-10 02:11:59,783 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:12:01] 2026-01-10 02:11:59,813 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:12:01] 2026-01-10 02:11:59,830 [wrapper] pilotpid: 2651015
[2026-01-09 21:12:01] 2026-01-10 02:11:59,856 [wrapper] Pilot exit status: 0
[2026-01-09 21:12:01] 2026-01-10 02:12:00,027 [wrapper] pandaids: 6962916442
[2026-01-09 21:12:01] 2026-01-10 02:12:00,445 [wrapper] cleanup supervisor_pilot 3135152 2651016
[2026-01-09 21:12:01] 2026-01-10 02:12:00,462 [wrapper] Test setup, not cleaning
[2026-01-09 21:12:01] 2026-01-10 02:12:00,484 [wrapper] apfmon messages muted
[2026-01-09 21:12:01] 2026-01-10 02:12:00,515 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:12:01] 2026-01-10 02:12:00,553 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:12:01]  *** Error codes and diagnostics ***
[2026-01-09 21:12:01]     "exeErrorCode": 0,
[2026-01-09 21:12:01]     "exeErrorDiag": "",
[2026-01-09 21:12:01]     "pilotErrorCode": 0,
[2026-01-09 21:12:01]     "pilotErrorDiag": "",
[2026-01-09 21:12:01]  *** Listing of results directory ***
[2026-01-09 21:12:01] total 445512
[2026-01-09 21:12:01] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 02:56 pilot3.tar.gz
[2026-01-09 21:12:01] -rwx------. 1 boincer umatlas     36322 Jan  8 03:03 runpilot2-wrapper.sh
[2026-01-09 21:12:01] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 03:05 queuedata.json
[2026-01-09 21:12:01] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:30 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:12:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:30 run_atlas
[2026-01-09 21:12:01] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:30 job.xml
[2026-01-09 21:12:01] -rw-r--r--. 2 boincer umatlas 228356966 Jan  9 19:30 EVNT.47898824._000623.pool.root.1
[2026-01-09 21:12:01] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 19:30 input.tar.gz
[2026-01-09 21:12:01] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:30 shared
[2026-01-09 21:12:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:30 start_atlas.sh
[2026-01-09 21:12:01] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:30 boinc_lockfile
[2026-01-09 21:12:01] -rw-r--r--. 1 boincer umatlas      2518 Jan  9 19:30 pandaJob.out
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas        57 Jan  9 19:30 setup.sh.local
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas    989374 Jan  9 19:31 agis_schedconf.cvmfs.json
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:31 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:12:01] drwx------. 5 boincer umatlas      4096 Jan  9 19:31 pilot3
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas 221573123 Jan  9 21:08 HITS.47898826._019014.pool.root.1
[2026-01-09 21:12:01] -rw-r--r--. 1 boincer umatlas       529 Jan  9 21:08 boinc_task_state.xml
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas      1043 Jan  9 21:10 memory_monitor_summary.json
[2026-01-09 21:12:01] -rw-r--r--. 1 boincer umatlas      7171 Jan  9 21:10 init_data.xml
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas    347216 Jan  9 21:10 log.47898826._019014.job.log.tgz.1
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas      7784 Jan  9 21:11 heartbeat.json
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas        95 Jan  9 21:11 pilot_heartbeat.json
[2026-01-09 21:12:01] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:11 boinc_mmap_file
[2026-01-09 21:12:01] -rw-r--r--. 1 boincer umatlas        27 Jan  9 21:11 wrapper_checkpoint.txt
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas      4897 Jan  9 21:11 pilotlog.txt
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas    829906 Jan  9 21:12 log.47898826._019014.job.log.1
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas       357 Jan  9 21:12 output.list
[2026-01-09 21:12:01] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:12 runtime_log
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas   1198080 Jan  9 21:12 result.tar.gz
[2026-01-09 21:12:01] -rw-r--r--. 1 boincer umatlas      9332 Jan  9 21:12 runtime_log.err
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas       653 Jan  9 21:12 CYVLDmRA0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGSeKDmRWD3um.diag
[2026-01-09 21:12:01] -rw-r--r--. 1 boincer umatlas     22374 Jan  9 21:12 stderr.txt
[2026-01-09 21:12:01] HITS file was successfully produced:
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas 221573123 Jan  9 21:08 shared/HITS.pool.root.1
[2026-01-09 21:12:01]  *** Contents of shared directory: ***
[2026-01-09 21:12:01] total 441164
[2026-01-09 21:12:01] -rw-r--r--. 2 boincer umatlas 228356966 Jan  9 19:30 ATLAS.root_0
[2026-01-09 21:12:01] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 19:30 input.tar.gz
[2026-01-09 21:12:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:30 start_atlas.sh
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas 221573123 Jan  9 21:08 HITS.pool.root.1
[2026-01-09 21:12:01] -rw-------. 1 boincer umatlas   1198080 Jan  9 21:12 result.tar.gz
21:12:23 (2646620): run_atlas exited; CPU time 31911.153853
21:12:23 (2646620): called boinc_finish(0)

</stderr_txt>
]]>

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