Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:49:49 (3212853): wrapper (7.7.26015): starting
13:49:49 (3212853): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 13:49:49] Arguments: --nthreads 3
[2026-01-10 13:49:49] Threads: 3
[2026-01-10 13:49:49] Checking for CVMFS
[2026-01-10 13:49:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 13:49:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 13:49:49] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 13:49:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 13:49:49] 2.9.2.0 2438121 3129 86028 154980 1 57 20684973 36864001 0 130560 0 2042854 99.988 118052 2890 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-10 13:49:49] CVMFS is ok
[2026-01-10 13:49:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 13:49:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 13:49:49] Further information can be found at the LHC@home message board.
[2026-01-10 13:49:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 13:49:49] Checking for apptainer binary...
[2026-01-10 13:49:49] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 13:49:49] Running /usr/bin/apptainer --version
[2026-01-10 13:49:49] apptainer version 1.4.1-1.1
[2026-01-10 13:49:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 13:49:49] magicA252
[2026-01-10 13:49:49] apptainer works
[2026-01-10 13:49:49] Set ATHENA_PROC_NUMBER=3
[2026-01-10 13:49:49] Set ATHENA_CORE_NUMBER=3
[2026-01-10 13:49:49] Starting ATLAS job with PandaID=6963186926
[2026-01-10 13:49:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 15:49:10]  *** The last 200 lines of the pilot log: ***
[2026-01-10 15:49:10] 2026-01-10 14:48:06,127 | INFO     | all payload control threads have been joined
[2026-01-10 15:49:10] 2026-01-10 14:48:06,370 | INFO     | [job] retrieve thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:06,376 | INFO     | [job] queue monitor thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:06,386 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:06,597 | INFO     | [job] job monitor thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:06,638 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:06,721 | INFO     | [job] control thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:06,925 | INFO     | [data] control thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:07,045 | INFO     | [payload] failed_post thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:07,132 | INFO     | [payload] control thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:07,376 | INFO     | [data] copytool_out thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:07,537 | INFO     | [data] copytool_in thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:07,598 | INFO     | [payload] validate_post thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:07,808 | INFO     | [job] validate thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:07,871 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:07,892 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 15:49:10] 2026-01-10 14:48:11,895 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:15,450 | INFO     | job.realtimelogging is not enabled
[2026-01-10 15:49:10] 2026-01-10 14:48:16,455 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 15:49:10] 2026-01-10 14:48:36,298 | INFO     | PID=3216569 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 15:49:10] 2026-01-10 14:48:36,299 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 15:49:10] 2026-01-10 14:48:36,299 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 15:49:10] 2026-01-10 14:48:36,299 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 15:49:10] 2026-01-10 14:49:04,195 | INFO     | [monitor] cgroup control has ended
[2026-01-10 15:49:10] 2026-01-10 14:49:05,716 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140079329412928)>', '<ExcThread(monitor, started 140078462523136)>']
[2026-01-10 15:49:10] 2026-01-10 14:49:06,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 15:49:10] 2026-01-10 14:49:06,453 | INFO     | [monitor] control thread has ended
[2026-01-10 15:49:10] 2026-01-10 14:49:10,720 | INFO     | all workflow threads have been joined
[2026-01-10 15:49:10] 2026-01-10 14:49:10,720 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 15:49:10] 2026-01-10 14:49:10,721 | INFO     | traces error code: 0
[2026-01-10 15:49:10] 2026-01-10 14:49:10,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 15:49:10] 2026-01-10 14:49:10,770 [wrapper] ==== pilot stdout END ====
[2026-01-10 15:49:10] 2026-01-10 14:49:10,773 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 15:49:10] 2026-01-10 14:49:10,776 [wrapper] pilotpid: 3216569
[2026-01-10 15:49:10] 2026-01-10 14:49:10,778 [wrapper] Pilot exit status: 0
[2026-01-10 15:49:10] 2026-01-10 14:49:10,786 [wrapper] pandaids: 6963186926
[2026-01-10 15:49:10] 2026-01-10 14:49:10,804 [wrapper] cleanup supervisor_pilot 3237485 3216570
[2026-01-10 15:49:10] 2026-01-10 14:49:10,806 [wrapper] Test setup, not cleaning
[2026-01-10 15:49:10] 2026-01-10 14:49:10,809 [wrapper] apfmon messages muted
[2026-01-10 15:49:10] 2026-01-10 14:49:10,811 [wrapper] ==== wrapper stdout END ====
[2026-01-10 15:49:10] 2026-01-10 14:49:10,814 [wrapper] ==== wrapper stderr END ====
[2026-01-10 15:49:10]  *** Error codes and diagnostics ***
[2026-01-10 15:49:10]     "exeErrorCode": 0,
[2026-01-10 15:49:10]     "exeErrorDiag": "",
[2026-01-10 15:49:10]     "pilotErrorCode": 0,
[2026-01-10 15:49:10]     "pilotErrorDiag": "",
[2026-01-10 15:49:10]  *** Listing of results directory ***
[2026-01-10 15:49:10] total 448108
[2026-01-10 15:49:10] -rwx------ 1 boinc boinc     36322 Jan  9 02:01 runpilot2-wrapper.sh
[2026-01-10 15:49:10] -rw-r--r-- 1 boinc boinc    579449 Jan  9 02:06 pilot3.tar.gz
[2026-01-10 15:49:10] -rw-r--r-- 1 boinc boinc      5112 Jan  9 02:06 queuedata.json
[2026-01-10 15:49:10] -rw-r--r-- 1 boinc boinc       100 Jan 10 13:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 15:49:10] -rwxr-xr-x 1 boinc boinc      7986 Jan 10 13:49 run_atlas
[2026-01-10 15:49:10] -rw-r--r-- 1 boinc boinc       105 Jan 10 13:49 job.xml
[2026-01-10 15:49:10] -rw-r--r-- 2 boinc boinc 223635299 Jan 10 13:49 EVNT.47898824._001412.pool.root.1
[2026-01-10 15:49:10] -rw-r--r-- 2 boinc boinc    592398 Jan 10 13:49 input.tar.gz
[2026-01-10 15:49:10] -rw-r--r-- 2 boinc boinc     15847 Jan 10 13:49 start_atlas.sh
[2026-01-10 15:49:10] drwxrwx--x 2 boinc boinc      4096 Jan 10 13:49 shared
[2026-01-10 15:49:10] -rw-r--r-- 1 boinc boinc         0 Jan 10 13:49 boinc_setup_complete
[2026-01-10 15:49:10] -rw-r--r-- 1 boinc boinc      6448 Jan 10 13:49 init_data.xml
[2026-01-10 15:49:10] -rw-r--r-- 1 boinc boinc         0 Jan 10 13:49 boinc_lockfile
[2026-01-10 15:49:10] -rw-r--r-- 1 boinc boinc      2519 Jan 10 13:49 pandaJob.out
[2026-01-10 15:49:10] -rw------- 1 boinc boinc    989556 Jan 10 13:49 agis_schedconf.cvmfs.json
[2026-01-10 15:49:10] -rw------- 1 boinc boinc   1516240 Jan 10 13:49 agis_ddmendpoints.agis.ALL.json
[2026-01-10 15:49:10] drwx------ 5 boinc boinc      4096 Jan 10 13:49 pilot3
[2026-01-10 15:49:10] -rw------- 1 boinc boinc 228723542 Jan 10 15:47 HITS.47898826._036834.pool.root.1
[2026-01-10 15:49:10] -rw-r--r-- 1 boinc boinc       530 Jan 10 15:47 boinc_task_state.xml
[2026-01-10 15:49:10] -rw------- 1 boinc boinc      1021 Jan 10 15:47 memory_monitor_summary.json
[2026-01-10 15:49:10] -rw------- 1 boinc boinc    285871 Jan 10 15:47 log.47898826._036834.job.log.tgz.1
[2026-01-10 15:49:10] -rw------- 1 boinc boinc      7758 Jan 10 15:48 heartbeat.json
[2026-01-10 15:49:10] -rw------- 1 boinc boinc        95 Jan 10 15:48 pilot_heartbeat.json
[2026-01-10 15:49:10] -rw-r--r-- 1 boinc boinc      8192 Jan 10 15:48 boinc_mmap_file
[2026-01-10 15:49:10] -rw-r--r-- 1 boinc boinc        27 Jan 10 15:48 wrapper_checkpoint.txt
[2026-01-10 15:49:10] -rw------- 1 boinc boinc      5010 Jan 10 15:49 pilotlog.txt
[2026-01-10 15:49:10] -rw------- 1 boinc boinc   1019794 Jan 10 15:49 log.47898826._036834.job.log.1
[2026-01-10 15:49:10] -rw------- 1 boinc boinc       357 Jan 10 15:49 output.list
[2026-01-10 15:49:10] -rw-r--r-- 1 boinc boinc       620 Jan 10 15:49 runtime_log
[2026-01-10 15:49:10] -rw------- 1 boinc boinc   1320960 Jan 10 15:49 result.tar.gz
[2026-01-10 15:49:10] -rw-r--r-- 1 boinc boinc      8912 Jan 10 15:49 runtime_log.err
[2026-01-10 15:49:10] -rw------- 1 boinc boinc       662 Jan 10 15:49 Ai5KDmm3Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmwpgKDmYosI2n.diag
[2026-01-10 15:49:10] -rw-r--r-- 1 boinc boinc      6633 Jan 10 15:49 stderr.txt
[2026-01-10 15:49:10] HITS file was successfully produced:
[2026-01-10 15:49:10] -rw------- 1 boinc boinc 228723542 Jan 10 15:47 shared/HITS.pool.root.1
[2026-01-10 15:49:10]  *** Contents of shared directory: ***
[2026-01-10 15:49:10] total 443656
[2026-01-10 15:49:10] -rw-r--r-- 2 boinc boinc 223635299 Jan 10 13:49 ATLAS.root_0
[2026-01-10 15:49:10] -rw-r--r-- 2 boinc boinc    592398 Jan 10 13:49 input.tar.gz
[2026-01-10 15:49:10] -rw-r--r-- 2 boinc boinc     15847 Jan 10 13:49 start_atlas.sh
[2026-01-10 15:49:10] -rw------- 1 boinc boinc 228723542 Jan 10 15:47 HITS.pool.root.1
[2026-01-10 15:49:10] -rw------- 1 boinc boinc   1320960 Jan 10 15:49 result.tar.gz
15:49:33 (3212853): run_atlas exited; CPU time 20552.728098
15:49:33 (3212853): called boinc_finish(0)

</stderr_txt>
]]>

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