Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:40:54 (2710674): wrapper (7.7.26015): starting
21:40:54 (2710674): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 21:40:54] Arguments: --nthreads 8
[2026-01-09 21:40:54] Threads: 8
[2026-01-09 21:40:54] Checking for CVMFS
[2026-01-09 21:40:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:40:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:40:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:40:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:40:56] 2.13.3.0 6248 14836 154596 154964 0 412 28549878 40960001 21268 16776704 0 20773404 99.676 18479661 37988 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 21:40:56] CVMFS is ok
[2026-01-09 21:40:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 21:40:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 21:40:56] Further information can be found at the LHC@home message board.
[2026-01-09 21:40:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:40:56] Checking for apptainer binary...
[2026-01-09 21:40:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:40:56] Running /usr/bin/apptainer --version
[2026-01-09 21:40:56] apptainer version 1.4.5-2.el9
[2026-01-09 21:40:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:40:57] c-211-35-1.aglt2.org
[2026-01-09 21:40:57] apptainer works
[2026-01-09 21:40:57] Set ATHENA_PROC_NUMBER=8
[2026-01-09 21:40:57] Set ATHENA_CORE_NUMBER=8
[2026-01-09 21:40:57] Starting ATLAS job with PandaID=6963187023
[2026-01-09 21:40:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 05:03:51]  *** The last 200 lines of the pilot log: ***
[2026-01-10 05:03:51] 2026-01-10 10:03:07,468 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 05:03:51] 2026-01-10 10:03:08,593 | INFO     | time since job start (26471s) is within the limit (349056.0s)
[2026-01-10 05:03:51] 2026-01-10 10:03:09,973 | INFO     | monitor loop #1575: job 0:6963187023 is in state 'finished'
[2026-01-10 05:03:51] 2026-01-10 10:03:09,973 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 05:03:51] 2026-01-10 10:03:10,611 | INFO     | time since job start (26473s) is within the limit (349056.0s)
[2026-01-10 05:03:51] 2026-01-10 10:03:12,478 | INFO     | monitor loop #1576: job 0:6963187023 is in state 'finished'
[2026-01-10 05:03:51] 2026-01-10 10:03:12,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 05:03:51] 2026-01-10 10:03:12,595 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 05:03:51] 2026-01-10 10:03:12,612 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2642.2640520833334
[2026-01-10 05:03:51] 2026-01-10 10:03:12,622 | INFO     | time since job start (26475s) is within the limit (349056.0s)
[2026-01-10 05:03:51] 2026-01-10 10:03:12,680 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963187023/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 05:03:51] 2026-01-10 10:03:12,680 | INFO     | extracted standard info from prmon json
[2026-01-10 05:03:51] 2026-01-10 10:03:12,681 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 05:03:51] 2026-01-10 10:03:12,681 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 05:03:51] 2026-01-10 10:03:12,685 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 05:03:51] 2026-01-10 10:03:12,685 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 05:03:51] 2026-01-10 10:03:12,701 | INFO     | fitting pss+swap vs Time
[2026-01-10 05:03:51] 2026-01-10 10:03:12,702 | INFO     | sum of square deviations: 24998540473.0
[2026-01-10 05:03:51] 2026-01-10 10:03:12,711 | INFO     | sum of deviations: 50834341602.583374
[2026-01-10 05:03:51] 2026-01-10 10:03:12,711 | INFO     | mean x: 1768026185.9166667
[2026-01-10 05:03:51] 2026-01-10 10:03:12,711 | INFO     | mean y: 2529650.349537037
[2026-01-10 05:03:51] 2026-01-10 10:03:12,711 | INFO     | intersect: -3592738129.1543365
[2026-01-10 05:03:51] 2026-01-10 10:03:12,712 | INFO     | chi2: 2.7980561503944843
[2026-01-10 05:03:51] 2026-01-10 10:03:12,713 | INFO     | sum of square deviations: 24140517643.7985
[2026-01-10 05:03:51] 2026-01-10 10:03:12,721 | INFO     | sum of deviations: 76654570522.86179
[2026-01-10 05:03:51] 2026-01-10 10:03:12,721 | INFO     | mean x: 1768026033.4168618
[2026-01-10 05:03:51] 2026-01-10 10:03:12,721 | INFO     | mean y: 2534193.658079625
[2026-01-10 05:03:51] 2026-01-10 10:03:12,722 | INFO     | intersect: -5611565647.304704
[2026-01-10 05:03:51] 2026-01-10 10:03:12,726 | INFO     | chi2: 2.1213473370212705
[2026-01-10 05:03:51] 2026-01-10 10:03:12,726 | INFO     | current chi2=2.1213473370212705 (change=24.184961880690203 %)
[2026-01-10 05:03:51] 2026-01-10 10:03:12,727 | INFO     | right removable region: 426
[2026-01-10 05:03:51] 2026-01-10 10:03:12,727 | INFO     | sum of square deviations: 24140486533.962536
[2026-01-10 05:03:51] 2026-01-10 10:03:12,736 | INFO     | sum of deviations: -32819200333.168625
[2026-01-10 05:03:51] 2026-01-10 10:03:12,736 | INFO     | mean x: 1768026338.4192038
[2026-01-10 05:03:51] 2026-01-10 10:03:12,736 | INFO     | mean y: 2544457.386416862
[2026-01-10 05:03:51] 2026-01-10 10:03:12,736 | INFO     | intersect: 2406191563.3908668
[2026-01-10 05:03:51] 2026-01-10 10:03:12,737 | INFO     | chi2: 0.9793131129869257
[2026-01-10 05:03:51] 2026-01-10 10:03:12,737 | INFO     | current chi2=0.9793131129869257 (change=65.00023372122618 %)
[2026-01-10 05:03:51] 2026-01-10 10:03:12,737 | INFO     | sum of square deviations: 23302319479.260628
[2026-01-10 05:03:51] 2026-01-10 10:03:12,750 | INFO     | sum of deviations: -35064771430.02841
[2026-01-10 05:03:51] 2026-01-10 10:03:12,750 | INFO     | mean x: 1768026490.9194312
[2026-01-10 05:03:51] 2026-01-10 10:03:12,750 | INFO     | mean y: 2544859.3815165875
[2026-01-10 05:03:51] 2026-01-10 10:03:12,750 | INFO     | intersect: 2663028715.5702457
[2026-01-10 05:03:51] 2026-01-10 10:03:12,751 | INFO     | chi2: 0.9701050506339621
[2026-01-10 05:03:51] 2026-01-10 10:03:12,751 | INFO     | current chi2=0.9701050506339621 (change=0.9402572303845478 %)
[2026-01-10 05:03:51] 2026-01-10 10:03:12,751 | INFO     | left removable region: 20
[2026-01-10 05:03:51] 2026-01-10 10:03:12,752 | INFO     | sum of square deviations: 20751084327.62789
[2026-01-10 05:03:51] 2026-01-10 10:03:12,760 | INFO     | sum of deviations: 27033940341.820194
[2026-01-10 05:03:51] 2026-01-10 10:03:12,760 | INFO     | mean x: 1768026612.908867
[2026-01-10 05:03:51] 2026-01-10 10:03:12,760 | INFO     | mean y: 2542617.0221674875
[2026-01-10 05:03:51] 2026-01-10 10:03:12,760 | INFO     | intersect: -2300793691.6492977
[2026-01-10 05:03:51] 2026-01-10 10:03:12,761 | INFO     | chi2: 0.13970564570490934
[2026-01-10 05:03:51] 2026-01-10 10:03:12,761 | INFO     | current memory leak: 1.30 B/s (using 406 data points, chi2=0.14)
[2026-01-10 05:03:51] 2026-01-10 10:03:12,766 | INFO     | could have reported an average CPU frequency of 2653 MHz (18 samples)
[2026-01-10 05:03:51] 2026-01-10 10:03:12,766 | INFO     | ..............................
[2026-01-10 05:03:51] 2026-01-10 10:03:12,766 | INFO     | . Timing measurements:
[2026-01-10 05:03:51] 2026-01-10 10:03:12,766 | INFO     | . get job = 0 s
[2026-01-10 05:03:51] 2026-01-10 10:03:12,766 | INFO     | . initial setup = 4 s
[2026-01-10 05:03:51] 2026-01-10 10:03:12,767 | INFO     | . payload setup = 30 s
[2026-01-10 05:03:51] 2026-01-10 10:03:12,767 | INFO     | . stage-in = 0 s
[2026-01-10 05:03:51] 2026-01-10 10:03:12,767 | INFO     | . payload execution = 26345 s
[2026-01-10 05:03:51] 2026-01-10 10:03:12,767 | INFO     | . stage-out = 4 s
[2026-01-10 05:03:51] 2026-01-10 10:03:12,767 | INFO     | . log creation = 0 s
[2026-01-10 05:03:51] 2026-01-10 10:03:12,767 | INFO     | ..............................
[2026-01-10 05:03:51] 2026-01-10 10:03:13,213 | INFO     | 
[2026-01-10 05:03:51] 2026-01-10 10:03:13,213 | INFO     | job summary report
[2026-01-10 05:03:51] 2026-01-10 10:03:13,213 | INFO     | --------------------------------------------------
[2026-01-10 05:03:51] 2026-01-10 10:03:13,213 | INFO     | PanDA job id: 6963187023
[2026-01-10 05:03:51] 2026-01-10 10:03:13,213 | INFO     | task id: 47898826
[2026-01-10 05:03:51] 2026-01-10 10:03:13,213 | INFO     | errors: (none)
[2026-01-10 05:03:51] 2026-01-10 10:03:13,214 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 05:03:51] 2026-01-10 10:03:13,214 | INFO     | pilot state: finished 
[2026-01-10 05:03:51] 2026-01-10 10:03:13,214 | INFO     | transexitcode: 0
[2026-01-10 05:03:51] 2026-01-10 10:03:13,214 | INFO     | exeerrorcode: 0
[2026-01-10 05:03:51] 2026-01-10 10:03:13,214 | INFO     | exeerrordiag: 
[2026-01-10 05:03:51] 2026-01-10 10:03:13,214 | INFO     | exitcode: 0
[2026-01-10 05:03:51] 2026-01-10 10:03:13,214 | INFO     | exitmsg: OK
[2026-01-10 05:03:51] 2026-01-10 10:03:13,214 | INFO     | cpuconsumptiontime: 58238 s
[2026-01-10 05:03:51] 2026-01-10 10:03:13,214 | INFO     | nevents: 400
[2026-01-10 05:03:51] 2026-01-10 10:03:13,214 | INFO     | neventsw: 0
[2026-01-10 05:03:51] 2026-01-10 10:03:13,214 | INFO     | pid: 2724810
[2026-01-10 05:03:51] 2026-01-10 10:03:13,214 | INFO     | pgrp: 2724810
[2026-01-10 05:03:51] 2026-01-10 10:03:13,214 | INFO     | corecount: 8
[2026-01-10 05:03:51] 2026-01-10 10:03:13,214 | INFO     | event service: False
[2026-01-10 05:03:51] 2026-01-10 10:03:13,215 | INFO     | sizes: {0: 2283799, 1: 2283827, 2: 2284026, 14: 2284026, 24: 2284054, 31: 2284344, 35: 2284500, 26379: 2320577, 26385: 2329631, 26412: 2329769}
[2026-01-10 05:03:51] 2026-01-10 10:03:13,215 | INFO     | --------------------------------------------------
[2026-01-10 05:03:51] 2026-01-10 10:03:13,215 | INFO     | 
[2026-01-10 05:03:51] 2026-01-10 10:03:13,215 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 05:03:51] 2026-01-10 10:03:13,307 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,307 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,308 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,308 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,308 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,308 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,308 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,308 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,308 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,309 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 05:03:51] 2026-01-10 10:03:13,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,309 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 05:03:51] 2026-01-10 10:03:13,309 | INFO     | job 6963187023 has completed (purged errors)
[2026-01-10 05:03:51] 2026-01-10 10:03:13,309 | INFO     | overall cleanup function is called
[2026-01-10 05:03:51] 2026-01-10 10:03:14,376 | INFO     | --- collectZombieJob: --- 10, [2724810]
[2026-01-10 05:03:51] 2026-01-10 10:03:14,376 | INFO     | zombie collector waiting for pid 2724810
[2026-01-10 05:03:51] 2026-01-10 10:03:14,376 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 05:03:51] 2026-01-10 10:03:14,376 | INFO     | collected zombie processes
[2026-01-10 05:03:51] 2026-01-10 10:03:14,376 | INFO     | will attempt to kill all subprocesses of pid=2724810
[2026-01-10 05:03:51] 2026-01-10 10:03:15,496 | INFO     | PID=2717338 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 05:03:51] 2026-01-10 10:03:15,496 | INFO     | .. there are 16 such processes running
[2026-01-10 05:03:51] 2026-01-10 10:03:15,530 | INFO     | process IDs to be killed: [2724810] (in reverse order)
[2026-01-10 05:03:51] 2026-01-10 10:03:15,792 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 05:03:51] 2026-01-10 10:03:15,793 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 05:03:51] 2026-01-10 10:03:15,809 | INFO     | did not find any defunct processes belonging to 2724810
[2026-01-10 05:03:51] 2026-01-10 10:03:15,822 | INFO     | did not find any defunct processes belonging to 2724810
[2026-01-10 05:03:51] 2026-01-10 10:03:15,823 | INFO     | ready for new job
[2026-01-10 05:03:51] 2026-01-10 10:03:15,823 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 05:03:51] 2026-01-10 10:03:15,825 | INFO     | ***************************************
[2026-01-10 05:03:51] 2026-01-10 10:03:15,826 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 05:03:51] 2026-01-10 10:03:15,826 | INFO     | ***************************************
[2026-01-10 05:03:51] 2026-01-10 10:03:15,826 | INFO     | 
[2026-01-10 05:03:51] 2026-01-10 10:03:15,831 | INFO     | architecture information:
[2026-01-10 05:03:51] 2026-01-10 10:03:15,832 | INFO     | executing command: cat /etc/os-release
[2026-01-10 05:03:51] 2026-01-10 10:03:15,850 | INFO     | cat /etc/os-release:
[2026-01-10 05:03:51] NAME="CentOS Linux"
[2026-01-10 05:03:51] VERSION="7 (Core)"
[2026-01-10 05:03:51] ID="centos"
[2026-01-10 05:03:51] ID_LIKE="rhel fedora"
[2026-01-10 05:03:51] VERSION_ID="7"
[2026-01-10 05:03:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 05:03:51] ANSI_COLOR="0;31"
[2026-01-10 05:03:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 05:03:51] HOME_URL="https://www.centos.org/"
[2026-01-10 05:03:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 05:03:51] 
[2026-01-10 05:03:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 05:03:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 05:03:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 05:03:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 05:03:51] 
[2026-01-10 05:03:51] 2026-01-10 10:03:15,850 | INFO     | ***************************************
[2026-01-10 05:03:51] 2026-01-10 10:03:16,354 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 05:03:51] 2026-01-10 10:03:16,429 | INFO     | sufficient remaining disk space (126427856896 B)
[2026-01-10 05:03:51] 2026-01-10 10:03:16,431 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 05:03:51] 2026-01-10 10:03:16,431 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 05:03:51] 2026-01-10 10:03:16,432 | INFO     | update_server=False
[2026-01-10 05:03:51] 2026-01-10 10:03:16,432 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 05:03:51] 2026-01-10 10:03:16,437 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-10 05:03:51] 2026-01-10 10:03:16,437 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 05:03:51] 2026-01-10 10:03:16,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 05:03:51] 2026-01-10 10:03:16,437 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 05:03:51] 2026-01-10 10:03:16,437 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:03:51] 2026-01-10 10:03:16,438 | INFO     | aborting loop
[2026-01-10 05:03:51] 2026-01-10 10:03:16,438 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 05:03:51] 2026-01-10 10:03:16,534 | INFO     | all payload control threads have been joined
[2026-01-10 05:03:51] 2026-01-10 10:03:16,837 | INFO     | all job control threads have been joined
[2026-01-10 05:03:51] 2026-01-10 10:03:17,347 | INFO     | all data control threads have been joined
[2026-01-10 05:03:51] 2026-01-10 10:03:17,439 | INFO     | [job] retrieve thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:17,443 | INFO     | [job] job monitor thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:17,498 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:17,540 | INFO     | [payload] control thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:17,727 | INFO     | [data] copytool_in thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:17,754 | INFO     | [payload] failed_post thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:17,851 | INFO     | [job] control thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:18,012 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 05:03:51] 2026-01-10 10:03:18,201 | INFO     | [payload] validate_post thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:18,293 | INFO     | [job] validate thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:18,293 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:18,348 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:18,353 | INFO     | [data] control thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:18,444 | INFO     | [data] copytool_out thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:18,636 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:18,844 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 05:03:51] 2026-01-10 10:03:19,018 | INFO     | [job] queue monitor thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:22,853 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 05:03:51] 2026-01-10 10:03:44,461 | INFO     | [monitor] cgroup control has ended
[2026-01-10 05:03:51] 2026-01-10 10:03:45,649 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140145935468352)>', '<ExcThread(monitor, started 140145562994432)>']
[2026-01-10 05:03:51] 2026-01-10 10:03:46,625 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 05:03:51] 2026-01-10 10:03:46,625 | INFO     | [monitor] control thread has ended
[2026-01-10 05:03:51] 2026-01-10 10:03:50,675 | INFO     | all workflow threads have been joined
[2026-01-10 05:03:51] 2026-01-10 10:03:50,675 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 05:03:51] 2026-01-10 10:03:50,675 | INFO     | traces error code: 0
[2026-01-10 05:03:51] 2026-01-10 10:03:50,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 05:03:51] 2026-01-10 10:03:50,894 [wrapper] ==== pilot stdout END ====
[2026-01-10 05:03:51] 2026-01-10 10:03:50,896 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 05:03:51] 2026-01-10 10:03:50,898 [wrapper] pilotpid: 2717338
[2026-01-10 05:03:51] 2026-01-10 10:03:50,912 [wrapper] Pilot exit status: 0
[2026-01-10 05:03:51] 2026-01-10 10:03:51,006 [wrapper] pandaids: 6963187023
[2026-01-10 05:03:51] 2026-01-10 10:03:51,172 [wrapper] cleanup supervisor_pilot 3594108 2717339
[2026-01-10 05:03:51] 2026-01-10 10:03:51,174 [wrapper] Test setup, not cleaning
[2026-01-10 05:03:51] 2026-01-10 10:03:51,177 [wrapper] apfmon messages muted
[2026-01-10 05:03:51] 2026-01-10 10:03:51,180 [wrapper] ==== wrapper stdout END ====
[2026-01-10 05:03:51] 2026-01-10 10:03:51,182 [wrapper] ==== wrapper stderr END ====
[2026-01-10 05:03:51]  *** Error codes and diagnostics ***
[2026-01-10 05:03:51]     "exeErrorCode": 0,
[2026-01-10 05:03:51]     "exeErrorDiag": "",
[2026-01-10 05:03:51]     "pilotErrorCode": 0,
[2026-01-10 05:03:51]     "pilotErrorDiag": "",
[2026-01-10 05:03:51]  *** Listing of results directory ***
[2026-01-10 05:03:51] total 446276
[2026-01-10 05:03:51] -rwx------. 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-10 05:03:51] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-10 05:03:51] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-10 05:03:51] -rw-r--r--. 1 boincer umatlas       100 Jan  9 21:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 05:03:51] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 21:40 run_atlas
[2026-01-10 05:03:51] -rw-r--r--. 1 boincer umatlas       105 Jan  9 21:40 job.xml
[2026-01-10 05:03:51] -rw-r--r--. 2 boincer umatlas 227176220 Jan  9 21:40 EVNT.47898824._001416.pool.root.1
[2026-01-10 05:03:51] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:40 start_atlas.sh
[2026-01-10 05:03:51] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 21:40 shared
[2026-01-10 05:03:51] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 21:40 input.tar.gz
[2026-01-10 05:03:51] -rw-r--r--. 1 boincer umatlas         0 Jan  9 21:40 boinc_lockfile
[2026-01-10 05:03:51] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 21:40 pandaJob.out
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas        57 Jan  9 21:40 setup.sh.local
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas    989382 Jan  9 21:41 agis_schedconf.cvmfs.json
[2026-01-10 05:03:51] drwx------. 5 boincer umatlas      4096 Jan  9 21:41 pilot3
[2026-01-10 05:03:51] -rw-r--r--. 1 boincer umatlas      6859 Jan 10 04:58 init_data.xml
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas 218187230 Jan 10 05:01 HITS.47898826._036931.pool.root.1
[2026-01-10 05:03:51] -rw-r--r--. 1 boincer umatlas       531 Jan 10 05:01 boinc_task_state.xml
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas      1041 Jan 10 05:02 memory_monitor_summary.json
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas   1516240 Jan 10 05:02 agis_ddmendpoints.agis.ALL.json
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas    601328 Jan 10 05:02 log.47898826._036931.job.log.tgz.1
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas        95 Jan 10 05:02 pilot_heartbeat.json
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas      7828 Jan 10 05:03 heartbeat.json
[2026-01-10 05:03:51] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 05:03 boinc_mmap_file
[2026-01-10 05:03:51] -rw-r--r--. 1 boincer umatlas        28 Jan 10 05:03 wrapper_checkpoint.txt
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas      4553 Jan 10 05:03 pilotlog.txt
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas   3252393 Jan 10 05:03 log.47898826._036931.job.log.1
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas       357 Jan 10 05:03 output.list
[2026-01-10 05:03:51] -rw-r--r--. 1 boincer umatlas       620 Jan 10 05:03 runtime_log
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas   3870720 Jan 10 05:03 result.tar.gz
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas       659 Jan 10 05:03 zRDLDmv3Fy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmt3lKDmnCSeCo.diag
[2026-01-10 05:03:51] -rw-r--r--. 1 boincer umatlas      9353 Jan 10 05:03 runtime_log.err
[2026-01-10 05:03:51] -rw-r--r--. 1 boincer umatlas     21467 Jan 10 05:03 stderr.txt
[2026-01-10 05:03:51] HITS file was successfully produced:
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas 218187230 Jan 10 05:01 shared/HITS.pool.root.1
[2026-01-10 05:03:51]  *** Contents of shared directory: ***
[2026-01-10 05:03:51] total 439312
[2026-01-10 05:03:51] -rw-r--r--. 2 boincer umatlas 227176220 Jan  9 21:40 ATLAS.root_0
[2026-01-10 05:03:51] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:40 start_atlas.sh
[2026-01-10 05:03:51] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 21:40 input.tar.gz
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas 218187230 Jan 10 05:01 HITS.pool.root.1
[2026-01-10 05:03:51] -rw-------. 1 boincer umatlas   3870720 Jan 10 05:03 result.tar.gz
05:03:53 (2710674): run_atlas exited; CPU time 59218.104097
05:03:53 (2710674): called boinc_finish(0)

</stderr_txt>
]]>

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