Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:58:39 (343): wrapper (7.7.26015): starting
10:58:39 (343): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 10:58:39] Arguments: --nthreads 8
[2026-01-10 10:58:39] Threads: 8
[2026-01-10 10:58:39] Checking for CVMFS
[2026-01-10 10:58:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 10:58:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 10:58:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 10:58:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 10:58:42] 2.11.2.0 18097 36705 131568 154974 2 60 20836428 25165825 899 130560 0 15473688 99.749 13036829 2610 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 10:58:42] CVMFS is ok
[2026-01-10 10:58:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 10:58:42] Checking for apptainer binary...
[2026-01-10 10:58:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 10:58:42] Running /usr/bin/apptainer --version
[2026-01-10 10:58:42] apptainer version 1.3.2-1.el7
[2026-01-10 10:58:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 10:59:08] cg-vwn387.simple-grid.lan
[2026-01-10 10:59:08] apptainer works
[2026-01-10 10:59:08] Set ATHENA_PROC_NUMBER=8
[2026-01-10 10:59:08] Set ATHENA_CORE_NUMBER=8
[2026-01-10 10:59:08] Starting ATLAS job with PandaID=6963165664
[2026-01-10 10:59:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 16:41:45]  *** The last 200 lines of the pilot log: ***
[2026-01-10 16:41:45] 2026-01-10 15:41:01,638 | INFO     | time since job start (20278s) is within the limit (349056.0s)
[2026-01-10 16:41:45] 2026-01-10 15:41:02,442 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 16:41:45] 2026-01-10 15:41:02,443 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-10 16:41:45] 2026-01-10 15:41:02,446 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6963165664/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 16:41:45] 2026-01-10 15:41:02,446 | INFO     | extracted standard info from prmon json
[2026-01-10 16:41:45] 2026-01-10 15:41:02,447 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 16:41:45] 2026-01-10 15:41:02,447 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 16:41:45] 2026-01-10 15:41:02,447 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 16:41:45] 2026-01-10 15:41:02,447 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 16:41:45] 2026-01-10 15:41:02,454 | INFO     | fitting pss+swap vs Time
[2026-01-10 16:41:45] 2026-01-10 15:41:02,455 | INFO     | sum of square deviations: 10546523325.0
[2026-01-10 16:41:45] 2026-01-10 15:41:02,459 | INFO     | sum of deviations: 145294444845.00006
[2026-01-10 16:41:45] 2026-01-10 15:41:02,459 | INFO     | mean x: 1768049784.5
[2026-01-10 16:41:45] 2026-01-10 15:41:02,459 | INFO     | mean y: 2458632.839506173
[2026-01-10 16:41:45] 2026-01-10 15:41:02,459 | INFO     | intersect: -24355123859.611813
[2026-01-10 16:41:45] 2026-01-10 15:41:02,460 | INFO     | chi2: 9.441914880159228
[2026-01-10 16:41:45] 2026-01-10 15:41:02,460 | INFO     | sum of square deviations: 10065751520.0
[2026-01-10 16:41:45] 2026-01-10 15:41:02,463 | INFO     | sum of deviations: 164541133369.0
[2026-01-10 16:41:45] 2026-01-10 15:41:02,464 | INFO     | mean x: 1768049632.0
[2026-01-10 16:41:45] 2026-01-10 15:41:02,464 | INFO     | mean y: 2464652.354231975
[2026-01-10 16:41:45] 2026-01-10 15:41:02,464 | INFO     | intersect: -28899191594.96026
[2026-01-10 16:41:45] 2026-01-10 15:41:02,464 | INFO     | chi2: 8.742307706313705
[2026-01-10 16:41:45] 2026-01-10 15:41:02,465 | INFO     | current chi2=8.742307706313705 (change=7.409589926675181 %)
[2026-01-10 16:41:45] 2026-01-10 15:41:02,465 | INFO     | right removable region: 318
[2026-01-10 16:41:45] 2026-01-10 15:41:02,465 | INFO     | sum of square deviations: 10065751520.0
[2026-01-10 16:41:45] 2026-01-10 15:41:02,468 | INFO     | sum of deviations: 30726122852.000008
[2026-01-10 16:41:45] 2026-01-10 15:41:02,469 | INFO     | mean x: 1768049937.0
[2026-01-10 16:41:45] 2026-01-10 15:41:02,469 | INFO     | mean y: 2494957.2570532914
[2026-01-10 16:41:45] 2026-01-10 15:41:02,469 | INFO     | intersect: -5394550605.092857
[2026-01-10 16:41:45] 2026-01-10 15:41:02,469 | INFO     | chi2: 4.38028396670204
[2026-01-10 16:41:45] 2026-01-10 15:41:02,469 | INFO     | current chi2=4.38028396670204 (change=53.608097273715615 %)
[2026-01-10 16:41:45] 2026-01-10 15:41:02,470 | INFO     | sum of square deviations: 9599817202.5
[2026-01-10 16:41:45] 2026-01-10 15:41:02,473 | INFO     | sum of deviations: -61340443409.5
[2026-01-10 16:41:45] 2026-01-10 15:41:02,473 | INFO     | mean x: 1768050089.5
[2026-01-10 16:41:45] 2026-01-10 15:41:02,474 | INFO     | mean y: 2525061.8184713377
[2026-01-10 16:41:45] 2026-01-10 15:41:02,474 | INFO     | intersect: 11299925228.135458
[2026-01-10 16:41:45] 2026-01-10 15:41:02,475 | INFO     | chi2: 1.2949967664754187
[2026-01-10 16:41:45] 2026-01-10 15:41:02,475 | INFO     | current chi2=1.2949967664754187 (change=70.43578050373674 %)
[2026-01-10 16:41:45] 2026-01-10 15:41:02,475 | INFO     | sum of square deviations: 9148487810.0
[2026-01-10 16:41:45] 2026-01-10 15:41:02,478 | INFO     | sum of deviations: -84479610467.0
[2026-01-10 16:41:45] 2026-01-10 15:41:02,479 | INFO     | mean x: 1768050242.0
[2026-01-10 16:41:45] 2026-01-10 15:41:02,479 | INFO     | mean y: 2532831.699029126
[2026-01-10 16:41:45] 2026-01-10 15:41:02,479 | INFO     | intersect: 16329186900.907991
[2026-01-10 16:41:45] 2026-01-10 15:41:02,479 | INFO     | chi2: 0.9715439708877498
[2026-01-10 16:41:45] 2026-01-10 15:41:02,480 | INFO     | current chi2=0.9715439708877498 (change=24.977112218434918 %)
[2026-01-10 16:41:45] 2026-01-10 15:41:02,480 | INFO     | left removable region: 30
[2026-01-10 16:41:45] 2026-01-10 15:41:02,480 | INFO     | sum of square deviations: 7407141672.0
[2026-01-10 16:41:45] 2026-01-10 15:41:02,483 | INFO     | sum of deviations: -45684739302.49999
[2026-01-10 16:41:45] 2026-01-10 15:41:02,483 | INFO     | mean x: 1768050516.5
[2026-01-10 16:41:45] 2026-01-10 15:41:02,483 | INFO     | mean y: 2534076.940972222
[2026-01-10 16:41:45] 2026-01-10 15:41:02,483 | INFO     | intersect: 10907270410.699184
[2026-01-10 16:41:45] 2026-01-10 15:41:02,484 | INFO     | chi2: 0.16510797747081035
[2026-01-10 16:41:45] 2026-01-10 15:41:02,484 | INFO     | current memory leak: -6.17 B/s (using 288 data points, chi2=0.17)
[2026-01-10 16:41:45] 2026-01-10 15:41:02,485 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-10 16:41:45] 2026-01-10 15:41:02,485 | INFO     | ..............................
[2026-01-10 16:41:45] 2026-01-10 15:41:02,485 | INFO     | . Timing measurements:
[2026-01-10 16:41:45] 2026-01-10 15:41:02,485 | INFO     | . get job = 0 s
[2026-01-10 16:41:45] 2026-01-10 15:41:02,485 | INFO     | . initial setup = 11 s
[2026-01-10 16:41:45] 2026-01-10 15:41:02,485 | INFO     | . payload setup = 151 s
[2026-01-10 16:41:45] 2026-01-10 15:41:02,486 | INFO     | . stage-in = 0 s
[2026-01-10 16:41:45] 2026-01-10 15:41:02,486 | INFO     | . payload execution = 19897 s
[2026-01-10 16:41:45] 2026-01-10 15:41:02,486 | INFO     | . stage-out = 1 s
[2026-01-10 16:41:45] 2026-01-10 15:41:02,486 | INFO     | . log creation = 0 s
[2026-01-10 16:41:45] 2026-01-10 15:41:02,486 | INFO     | ..............................
[2026-01-10 16:41:45] 2026-01-10 15:41:02,600 | INFO     | 
[2026-01-10 16:41:45] 2026-01-10 15:41:02,600 | INFO     | job summary report
[2026-01-10 16:41:45] 2026-01-10 15:41:02,600 | INFO     | --------------------------------------------------
[2026-01-10 16:41:45] 2026-01-10 15:41:02,601 | INFO     | PanDA job id: 6963165664
[2026-01-10 16:41:45] 2026-01-10 15:41:02,601 | INFO     | task id: 47898826
[2026-01-10 16:41:45] 2026-01-10 15:41:02,601 | INFO     | errors: (none)
[2026-01-10 16:41:45] 2026-01-10 15:41:02,601 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 16:41:45] 2026-01-10 15:41:02,601 | INFO     | pilot state: finished 
[2026-01-10 16:41:45] 2026-01-10 15:41:02,601 | INFO     | transexitcode: 0
[2026-01-10 16:41:45] 2026-01-10 15:41:02,601 | INFO     | exeerrorcode: 0
[2026-01-10 16:41:45] 2026-01-10 15:41:02,601 | INFO     | exeerrordiag: 
[2026-01-10 16:41:45] 2026-01-10 15:41:02,602 | INFO     | exitcode: 0
[2026-01-10 16:41:45] 2026-01-10 15:41:02,602 | INFO     | exitmsg: OK
[2026-01-10 16:41:45] 2026-01-10 15:41:02,602 | INFO     | cpuconsumptiontime: 80673 s
[2026-01-10 16:41:45] 2026-01-10 15:41:02,602 | INFO     | nevents: 400
[2026-01-10 16:41:45] 2026-01-10 15:41:02,602 | INFO     | neventsw: 0
[2026-01-10 16:41:45] 2026-01-10 15:41:02,602 | INFO     | pid: 10616
[2026-01-10 16:41:45] 2026-01-10 15:41:02,602 | INFO     | pgrp: 10616
[2026-01-10 16:41:45] 2026-01-10 15:41:02,602 | INFO     | corecount: 8
[2026-01-10 16:41:45] 2026-01-10 15:41:02,602 | INFO     | event service: False
[2026-01-10 16:41:45] 2026-01-10 15:41:02,602 | INFO     | sizes: {0: 2283745, 1: 2284000, 12: 2284000, 23: 2284028, 34: 2284056, 44: 2284084, 55: 2284240, 66: 2284268, 77: 2284296, 87: 2284352, 98: 2284380, 100: 2284950, 
[2026-01-10 16:41:45] 2026-01-10 15:41:02,603 | INFO     | --------------------------------------------------
[2026-01-10 16:41:45] 2026-01-10 15:41:02,603 | INFO     | 
[2026-01-10 16:41:45] 2026-01-10 15:41:02,603 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2026-01-10 16:41:45] 2026-01-10 15:41:02,627 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,628 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,628 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,628 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,628 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,628 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,629 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,629 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,629 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,629 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 16:41:45] 2026-01-10 15:41:02,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,630 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 16:41:45] 2026-01-10 15:41:02,630 | INFO     | job 6963165664 has completed (purged errors)
[2026-01-10 16:41:45] 2026-01-10 15:41:02,630 | INFO     | overall cleanup function is called
[2026-01-10 16:41:45] 2026-01-10 15:41:03,638 | INFO     | --- collectZombieJob: --- 10, [10616]
[2026-01-10 16:41:45] 2026-01-10 15:41:03,639 | INFO     | zombie collector waiting for pid 10616
[2026-01-10 16:41:45] 2026-01-10 15:41:03,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 16:41:45] 2026-01-10 15:41:03,639 | INFO     | collected zombie processes
[2026-01-10 16:41:45] 2026-01-10 15:41:03,639 | INFO     | will attempt to kill all subprocesses of pid=10616
[2026-01-10 16:41:45] 2026-01-10 15:41:03,709 | INFO     | process IDs to be killed: [10616] (in reverse order)
[2026-01-10 16:41:45] 2026-01-10 15:41:03,758 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 16:41:45] 2026-01-10 15:41:03,759 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 16:41:45] 2026-01-10 15:41:03,761 | INFO     | did not find any defunct processes belonging to 10616
[2026-01-10 16:41:45] 2026-01-10 15:41:03,763 | INFO     | did not find any defunct processes belonging to 10616
[2026-01-10 16:41:45] 2026-01-10 15:41:03,763 | INFO     | ready for new job
[2026-01-10 16:41:45] 2026-01-10 15:41:03,764 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 16:41:45] 2026-01-10 15:41:03,766 | INFO     | ***************************************
[2026-01-10 16:41:45] 2026-01-10 15:41:03,766 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 16:41:45] 2026-01-10 15:41:03,766 | INFO     | ***************************************
[2026-01-10 16:41:45] 2026-01-10 15:41:03,766 | INFO     | 
[2026-01-10 16:41:45] 2026-01-10 15:41:03,767 | INFO     | pilot is running in a VM
[2026-01-10 16:41:45] 2026-01-10 15:41:03,767 | INFO     | architecture information:
[2026-01-10 16:41:45] 2026-01-10 15:41:03,768 | INFO     | executing command: cat /etc/os-release
[2026-01-10 16:41:45] 2026-01-10 15:41:03,785 | INFO     | cat /etc/os-release:
[2026-01-10 16:41:45] NAME="CentOS Linux"
[2026-01-10 16:41:45] VERSION="7 (Core)"
[2026-01-10 16:41:45] ID="centos"
[2026-01-10 16:41:45] ID_LIKE="rhel fedora"
[2026-01-10 16:41:45] VERSION_ID="7"
[2026-01-10 16:41:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 16:41:45] ANSI_COLOR="0;31"
[2026-01-10 16:41:45] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 16:41:45] HOME_URL="https://www.centos.org/"
[2026-01-10 16:41:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 16:41:45] 
[2026-01-10 16:41:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 16:41:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 16:41:45] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 16:41:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 16:41:45] 
[2026-01-10 16:41:45] 2026-01-10 15:41:03,785 | INFO     | ***************************************
[2026-01-10 16:41:45] 2026-01-10 15:41:04,288 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2026-01-10 16:41:45] 2026-01-10 15:41:04,311 | INFO     | sufficient remaining disk space (498057871360 B)
[2026-01-10 16:41:45] 2026-01-10 15:41:04,311 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 16:41:45] 2026-01-10 15:41:04,311 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 16:41:45] 2026-01-10 15:41:04,312 | INFO     | update_server=False
[2026-01-10 16:41:45] 2026-01-10 15:41:04,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 16:41:45] 2026-01-10 15:41:04,312 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:41:45] 2026-01-10 15:41:04,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 16:41:45] 2026-01-10 15:41:04,313 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 16:41:45] 2026-01-10 15:41:04,313 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 16:41:45] 2026-01-10 15:41:04,313 | INFO     | aborting loop
[2026-01-10 16:41:45] 2026-01-10 15:41:04,998 | INFO     | all job control threads have been joined
[2026-01-10 16:41:45] 2026-01-10 15:41:05,294 | INFO     | all data control threads have been joined
[2026-01-10 16:41:45] 2026-01-10 15:41:05,314 | INFO     | [job] retrieve thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:05,319 | INFO     | [job] queue monitor thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:05,320 | INFO     | [job] job monitor thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:05,325 | INFO     | [data] copytool_in thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:05,701 | INFO     | all payload control threads have been joined
[2026-01-10 16:41:45] 2026-01-10 15:41:05,726 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:05,765 | INFO     | [job] validate thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:05,873 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:06,001 | INFO     | [job] control thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:06,051 | INFO     | [payload] validate_post thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:06,299 | INFO     | [data] control thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:06,315 | INFO     | [data] copytool_out thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:06,423 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:06,686 | INFO     | [payload] failed_post thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:06,706 | INFO     | [payload] control thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:06,745 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:08,320 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 16:41:45] 2026-01-10 15:41:34,736 | INFO     | PID=4144 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-10 16:41:45] 2026-01-10 15:41:34,736 | INFO     | .. there are 2 such processes running
[2026-01-10 16:41:45] 2026-01-10 15:41:34,736 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 16:41:45] 2026-01-10 15:41:34,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 16:41:45] 2026-01-10 15:41:34,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 16:41:45] 2026-01-10 15:41:37,759 | INFO     | [monitor] cgroup control has ended
[2026-01-10 16:41:45] 2026-01-10 15:41:39,826 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140620695734080)>', '<ExcThread(monitor, started 140620014270208)>']
[2026-01-10 16:41:45] 2026-01-10 15:41:40,758 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 16:41:45] 2026-01-10 15:41:40,759 | INFO     | [monitor] control thread has ended
[2026-01-10 16:41:45] 2026-01-10 15:41:44,852 | INFO     | all workflow threads have been joined
[2026-01-10 16:41:45] 2026-01-10 15:41:44,852 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 16:41:45] 2026-01-10 15:41:44,853 | INFO     | traces error code: 0
[2026-01-10 16:41:45] 2026-01-10 15:41:44,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 16:41:45] 2026-01-10 15:41:44,996 [wrapper] ==== pilot stdout END ====
[2026-01-10 16:41:45] 2026-01-10 15:41:45,002 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 16:41:45] 2026-01-10 15:41:45,007 [wrapper] pilotpid: 4144
[2026-01-10 16:41:45] 2026-01-10 15:41:45,012 [wrapper] Pilot exit status: 0
[2026-01-10 16:41:45] 2026-01-10 15:41:45,043 [wrapper] pandaids: 6963165664
[2026-01-10 16:41:45] 2026-01-10 15:41:45,102 [wrapper] cleanup supervisor_pilot 23754 4145
[2026-01-10 16:41:45] 2026-01-10 15:41:45,108 [wrapper] Test setup, not cleaning
[2026-01-10 16:41:45] 2026-01-10 15:41:45,112 [wrapper] apfmon messages muted
[2026-01-10 16:41:45] 2026-01-10 15:41:45,116 [wrapper] ==== wrapper stdout END ====
[2026-01-10 16:41:45] 2026-01-10 15:41:45,120 [wrapper] ==== wrapper stderr END ====
[2026-01-10 16:41:45]  *** Error codes and diagnostics ***
[2026-01-10 16:41:45]     "exeErrorCode": 0,
[2026-01-10 16:41:45]     "exeErrorDiag": "",
[2026-01-10 16:41:45]     "pilotErrorCode": 0,
[2026-01-10 16:41:45]     "pilotErrorDiag": "",
[2026-01-10 16:41:45]  *** Listing of results directory ***
[2026-01-10 16:41:45] total 450236
[2026-01-10 16:41:45] -rwx------. 1 boinc boinc     36322 Jan  9 01:56 runpilot2-wrapper.sh
[2026-01-10 16:41:45] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-10 16:41:45] -rw-r--r--. 1 boinc boinc      5112 Jan  9 01:57 queuedata.json
[2026-01-10 16:41:45] -rw-r--r--. 1 boinc boinc       100 Jan 10 10:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 16:41:45] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 10:58 run_atlas
[2026-01-10 16:41:45] -rw-r--r--. 1 boinc boinc       105 Jan 10 10:58 job.xml
[2026-01-10 16:41:45] -rw-r--r--. 2 boinc boinc 223990566 Jan 10 10:58 EVNT.47898824._001351.pool.root.1
[2026-01-10 16:41:45] -rw-r--r--. 1 boinc boinc      6392 Jan 10 10:58 init_data.xml
[2026-01-10 16:41:45] -rw-r--r--. 2 boinc boinc     15847 Jan 10 10:58 start_atlas.sh
[2026-01-10 16:41:45] drwxrwx--x. 2 boinc boinc        68 Jan 10 10:58 shared
[2026-01-10 16:41:45] -rw-r--r--. 2 boinc boinc    592397 Jan 10 10:58 input.tar.gz
[2026-01-10 16:41:45] -rw-r--r--. 1 boinc boinc         0 Jan 10 10:58 boinc_lockfile
[2026-01-10 16:41:45] -rw-r--r--. 1 boinc boinc      2520 Jan 10 10:59 pandaJob.out
[2026-01-10 16:41:45] -rw-------. 1 boinc boinc    989548 Jan 10 11:02 agis_schedconf.cvmfs.json
[2026-01-10 16:41:45] drwx------. 5 boinc boinc      4096 Jan 10 11:03 pilot3
[2026-01-10 16:41:45] -rw-------. 1 boinc boinc 226696852 Jan 10 16:40 HITS.47898826._034883.pool.root.1
[2026-01-10 16:41:45] -rw-r--r--. 1 boinc boinc       531 Jan 10 16:40 boinc_task_state.xml
[2026-01-10 16:41:45] -rw-------. 1 boinc boinc        95 Jan 10 16:40 pilot_heartbeat.json
[2026-01-10 16:41:45] -rw-------. 1 boinc boinc      1021 Jan 10 16:40 memory_monitor_summary.json
[2026-01-10 16:41:45] -rw-------. 1 boinc boinc   1516240 Jan 10 16:40 agis_ddmendpoints.agis.ALL.json
[2026-01-10 16:41:45] -rw-------. 1 boinc boinc    532405 Jan 10 16:40 log.47898826._034883.job.log.tgz.1
[2026-01-10 16:41:45] -rw-------. 1 boinc boinc      7783 Jan 10 16:41 heartbeat.json
[2026-01-10 16:41:45] -rw-r--r--. 1 boinc boinc      8192 Jan 10 16:41 boinc_mmap_file
[2026-01-10 16:41:45] -rw-r--r--. 1 boinc boinc        28 Jan 10 16:41 wrapper_checkpoint.txt
[2026-01-10 16:41:45] -rw-------. 1 boinc boinc      4884 Jan 10 16:41 pilotlog.txt
[2026-01-10 16:41:45] -rw-------. 1 boinc boinc   2693982 Jan 10 16:41 log.47898826._034883.job.log.1
[2026-01-10 16:41:45] -rw-------. 1 boinc boinc       357 Jan 10 16:41 output.list
[2026-01-10 16:41:45] -rw-r--r--. 1 boinc boinc       620 Jan 10 16:41 runtime_log
[2026-01-10 16:41:45] -rw-------. 1 boinc boinc   3246080 Jan 10 16:41 result.tar.gz
[2026-01-10 16:41:45] -rw-r--r--. 1 boinc boinc      8833 Jan 10 16:41 runtime_log.err
[2026-01-10 16:41:45] -rw-------. 1 boinc boinc       657 Jan 10 16:41 IE4LDmEzFy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNllKDmil4Whm.diag
[2026-01-10 16:41:45] -rw-r--r--. 1 boinc boinc     20771 Jan 10 16:41 stderr.txt
[2026-01-10 16:41:45] HITS file was successfully produced:
[2026-01-10 16:41:45] -rw-------. 1 boinc boinc 226696852 Jan 10 16:40 shared/HITS.pool.root.1
[2026-01-10 16:41:45]  *** Contents of shared directory: ***
[2026-01-10 16:41:45] total 443896
[2026-01-10 16:41:45] -rw-r--r--. 2 boinc boinc 223990566 Jan 10 10:58 ATLAS.root_0
[2026-01-10 16:41:45] -rw-r--r--. 2 boinc boinc     15847 Jan 10 10:58 start_atlas.sh
[2026-01-10 16:41:45] -rw-r--r--. 2 boinc boinc    592397 Jan 10 10:58 input.tar.gz
[2026-01-10 16:41:45] -rw-------. 1 boinc boinc 226696852 Jan 10 16:40 HITS.pool.root.1
[2026-01-10 16:41:45] -rw-------. 1 boinc boinc   3246080 Jan 10 16:41 result.tar.gz
16:41:47 (343): run_atlas exited; CPU time 80858.904290
16:41:47 (343): called boinc_finish(0)

</stderr_txt>
]]>

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