Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:58:19 (960381): wrapper (7.7.26015): starting
18:58:19 (960381): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:58:19] Arguments: --nthreads 8
[2026-01-09 18:58:19] Threads: 8
[2026-01-09 18:58:19] Checking for CVMFS
[2026-01-09 18:58:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:58:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:58:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:58:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:58:20] 2.13.3.0 12388 94053 227508 154961 3 412 16551143 32935936 17344 16776704 0 415222751 99.473 552498853 38100 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 18:58:20] CVMFS is ok
[2026-01-09 18:58:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:58:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:58:20] Further information can be found at the LHC@home message board.
[2026-01-09 18:58:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:58:20] Checking for apptainer binary...
[2026-01-09 18:58:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:58:20] Running /usr/bin/apptainer --version
[2026-01-09 18:58:20] apptainer version 1.4.5-2.el9
[2026-01-09 18:58:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:58:21] c7-4-31.aglt2.org
[2026-01-09 18:58:21] apptainer works
[2026-01-09 18:58:21] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:58:21] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:58:21] Starting ATLAS job with PandaID=6961933447
[2026-01-09 18:58:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:38:19]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:38:19] 2026-01-10 03:37:40,619 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:38:19] 2026-01-10 03:37:40,620 | INFO     | sum of square deviations: 3038998472.0373836
[2026-01-09 22:38:19] 2026-01-10 03:37:40,621 | INFO     | sum of deviations: 45934805913.121445
[2026-01-09 22:38:19] 2026-01-10 03:37:40,621 | INFO     | mean x: 1768009695.7102804
[2026-01-09 22:38:19] 2026-01-10 03:37:40,621 | INFO     | mean y: 2505803.308411215
[2026-01-09 22:38:19] 2026-01-10 03:37:40,621 | INFO     | intersect: -26721160882.355396
[2026-01-09 22:38:19] 2026-01-10 03:37:40,626 | INFO     | chi2: 1.3674105094572093
[2026-01-09 22:38:19] 2026-01-10 03:37:40,626 | INFO     | sum of square deviations: 2830943179.3110046
[2026-01-09 22:38:19] 2026-01-10 03:37:40,627 | INFO     | sum of deviations: 44666264737.8517
[2026-01-09 22:38:19] 2026-01-10 03:37:40,627 | INFO     | mean x: 1768009543.215311
[2026-01-09 22:38:19] 2026-01-10 03:37:40,627 | INFO     | mean y: 2504873.3588516745
[2026-01-09 22:38:19] 2026-01-10 03:37:40,627 | INFO     | intersect: -27892926901.263752
[2026-01-09 22:38:19] 2026-01-10 03:37:40,628 | INFO     | chi2: 1.3674387126274488
[2026-01-09 22:38:19] 2026-01-10 03:37:40,628 | INFO     | current chi2=1.3674387126274488 (change=-0.002062524022185062 %)
[2026-01-09 22:38:19] 2026-01-10 03:37:40,628 | INFO     | right removable region: 208
[2026-01-09 22:38:19] 2026-01-10 03:37:40,628 | INFO     | sum of square deviations: 2830915729.3110046
[2026-01-09 22:38:19] 2026-01-10 03:37:40,629 | INFO     | sum of deviations: 16829958025.808613
[2026-01-09 22:38:19] 2026-01-10 03:37:40,629 | INFO     | mean x: 1768009848.215311
[2026-01-09 22:38:19] 2026-01-10 03:37:40,629 | INFO     | mean y: 2526872.5598086123
[2026-01-09 22:38:19] 2026-01-10 03:37:40,629 | INFO     | intersect: -10508394108.447958
[2026-01-09 22:38:19] 2026-01-10 03:37:40,630 | INFO     | chi2: 0.06112695486391381
[2026-01-09 22:38:19] 2026-01-10 03:37:40,630 | INFO     | current chi2=0.06112695486391381 (change=95.52972904324261 %)
[2026-01-09 22:38:19] 2026-01-10 03:37:40,630 | INFO     | sum of square deviations: 2632554099.0735226
[2026-01-09 22:38:19] 2026-01-10 03:37:40,631 | INFO     | sum of deviations: 17804065351.24999
[2026-01-09 22:38:19] 2026-01-10 03:37:40,631 | INFO     | mean x: 1768010000.7205882
[2026-01-09 22:38:19] 2026-01-10 03:37:40,631 | INFO     | mean y: 2526084.9166666665
[2026-01-09 22:38:19] 2026-01-10 03:37:40,631 | INFO     | intersect: -11954594038.681513
[2026-01-09 22:38:19] 2026-01-10 03:37:40,631 | INFO     | chi2: 0.04312634007353163
[2026-01-09 22:38:19] 2026-01-10 03:37:40,632 | INFO     | current chi2=0.04312634007353163 (change=29.44791676676309 %)
[2026-01-09 22:38:19] 2026-01-10 03:37:40,632 | INFO     | sum of square deviations: 2443681018.8241134
[2026-01-09 22:38:19] 2026-01-10 03:37:40,633 | INFO     | sum of deviations: 21008764090.49247
[2026-01-09 22:38:19] 2026-01-10 03:37:40,633 | INFO     | mean x: 1768010153.2261307
[2026-01-09 22:38:19] 2026-01-10 03:37:40,633 | INFO     | mean y: 2523522.3668341707
[2026-01-09 22:38:19] 2026-01-10 03:37:40,633 | INFO     | intersect: -15197376928.059622
[2026-01-09 22:38:19] 2026-01-10 03:37:40,633 | INFO     | chi2: 0.01532780964114026
[2026-01-09 22:38:19] 2026-01-10 03:37:40,633 | INFO     | current chi2=0.01532780964114026 (change=64.45835743305388 %)
[2026-01-09 22:38:19] 2026-01-10 03:37:40,633 | INFO     | sum of square deviations: 2264063926.0618486
[2026-01-09 22:38:19] 2026-01-10 03:37:40,634 | INFO     | sum of deviations: 18335019908.22681
[2026-01-09 22:38:19] 2026-01-10 03:37:40,634 | INFO     | mean x: 1768010305.7319589
[2026-01-09 22:38:19] 2026-01-10 03:37:40,635 | INFO     | mean y: 2525791.350515464
[2026-01-09 22:38:19] 2026-01-10 03:37:40,635 | INFO     | intersect: -14315313815.736664
[2026-01-09 22:38:19] 2026-01-10 03:37:40,635 | INFO     | chi2: 0.014087846311105191
[2026-01-09 22:38:19] 2026-01-10 03:37:40,635 | INFO     | current chi2=0.014087846311105191 (change=8.089631585109025 %)
[2026-01-09 22:38:19] 2026-01-10 03:37:40,635 | INFO     | left removable region: 40
[2026-01-09 22:38:19] 2026-01-10 03:37:40,635 | INFO     | sum of square deviations: 1470320912.994046
[2026-01-09 22:38:19] 2026-01-10 03:37:40,636 | INFO     | sum of deviations: 8788639014.928574
[2026-01-09 22:38:19] 2026-01-10 03:37:40,636 | INFO     | mean x: 1768010732.7559524
[2026-01-09 22:38:19] 2026-01-10 03:37:40,636 | INFO     | mean y: 2534377.0714285714
[2026-01-09 22:38:19] 2026-01-10 03:37:40,636 | INFO     | intersect: -10565504183.347485
[2026-01-09 22:38:19] 2026-01-10 03:37:40,636 | INFO     | chi2: 0.00772377594129032
[2026-01-09 22:38:19] 2026-01-10 03:37:40,636 | INFO     | current memory leak: 5.98 B/s (using 168 data points, chi2=0.01)
[2026-01-09 22:38:19] 2026-01-10 03:37:40,637 | INFO     | could have reported an average CPU frequency of 3228 MHz (11 samples)
[2026-01-09 22:38:19] 2026-01-10 03:37:40,637 | INFO     | ..............................
[2026-01-09 22:38:19] 2026-01-10 03:37:40,637 | INFO     | . Timing measurements:
[2026-01-09 22:38:19] 2026-01-10 03:37:40,637 | INFO     | . get job = 0 s
[2026-01-09 22:38:19] 2026-01-10 03:37:40,637 | INFO     | . initial setup = 4 s
[2026-01-09 22:38:19] 2026-01-10 03:37:40,637 | INFO     | . payload setup = 19 s
[2026-01-09 22:38:19] 2026-01-10 03:37:40,637 | INFO     | . stage-in = 0 s
[2026-01-09 22:38:19] 2026-01-10 03:37:40,638 | INFO     | . payload execution = 13054 s
[2026-01-09 22:38:19] 2026-01-10 03:37:40,638 | INFO     | . stage-out = 3 s
[2026-01-09 22:38:19] 2026-01-10 03:37:40,638 | INFO     | . log creation = 0 s
[2026-01-09 22:38:19] 2026-01-10 03:37:40,638 | INFO     | ..............................
[2026-01-09 22:38:19] 2026-01-10 03:37:40,679 | INFO     | time since job start (13130s) is within the limit (174528.0s)
[2026-01-09 22:38:19] 2026-01-10 03:37:40,711 | INFO     | 
[2026-01-09 22:38:19] 2026-01-10 03:37:40,712 | INFO     | job summary report
[2026-01-09 22:38:19] 2026-01-10 03:37:40,712 | INFO     | --------------------------------------------------
[2026-01-09 22:38:19] 2026-01-10 03:37:40,712 | INFO     | PanDA job id: 6961933447
[2026-01-09 22:38:19] 2026-01-10 03:37:40,712 | INFO     | task id: 47898826
[2026-01-09 22:38:19] 2026-01-10 03:37:40,712 | INFO     | errors: (none)
[2026-01-09 22:38:19] 2026-01-10 03:37:40,712 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:38:19] 2026-01-10 03:37:40,712 | INFO     | pilot state: finished 
[2026-01-09 22:38:19] 2026-01-10 03:37:40,712 | INFO     | transexitcode: 0
[2026-01-09 22:38:19] 2026-01-10 03:37:40,712 | INFO     | exeerrorcode: 0
[2026-01-09 22:38:19] 2026-01-10 03:37:40,712 | INFO     | exeerrordiag: 
[2026-01-09 22:38:19] 2026-01-10 03:37:40,712 | INFO     | exitcode: 0
[2026-01-09 22:38:19] 2026-01-10 03:37:40,712 | INFO     | exitmsg: OK
[2026-01-09 22:38:19] 2026-01-10 03:37:40,712 | INFO     | cpuconsumptiontime: 42070 s
[2026-01-09 22:38:19] 2026-01-10 03:37:40,713 | INFO     | nevents: 400
[2026-01-09 22:38:19] 2026-01-10 03:37:40,713 | INFO     | neventsw: 0
[2026-01-09 22:38:19] 2026-01-10 03:37:40,713 | INFO     | pid: 976402
[2026-01-09 22:38:19] 2026-01-10 03:37:40,713 | INFO     | pgrp: 976402
[2026-01-09 22:38:19] 2026-01-10 03:37:40,713 | INFO     | corecount: 8
[2026-01-09 22:38:19] 2026-01-10 03:37:40,713 | INFO     | event service: False
[2026-01-09 22:38:19] 2026-01-10 03:37:40,713 | INFO     | sizes: {0: 2283912, 11: 2283912, 12: 2284202, 22: 2284230, 13078: 2314593, 13081: 2323591, 13082: 2323775, 13093: 2323969}
[2026-01-09 22:38:19] 2026-01-10 03:37:40,713 | INFO     | --------------------------------------------------
[2026-01-09 22:38:19] 2026-01-10 03:37:40,713 | INFO     | 
[2026-01-09 22:38:19] 2026-01-10 03:37:40,713 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 22:38:19] 2026-01-10 03:37:40,753 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,753 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,753 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,753 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,753 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,753 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,753 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,753 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,753 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,754 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,754 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,754 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,754 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,754 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,754 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,754 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,754 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,754 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:38:19] 2026-01-10 03:37:40,754 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,754 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:38:19] 2026-01-10 03:37:40,754 | INFO     | job 6961933447 has completed (purged errors)
[2026-01-09 22:38:19] 2026-01-10 03:37:40,754 | INFO     | overall cleanup function is called
[2026-01-09 22:38:19] 2026-01-10 03:37:41,763 | INFO     | --- collectZombieJob: --- 10, [976402]
[2026-01-09 22:38:19] 2026-01-10 03:37:41,764 | INFO     | zombie collector waiting for pid 976402
[2026-01-09 22:38:19] 2026-01-10 03:37:41,764 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:38:19] 2026-01-10 03:37:41,764 | INFO     | collected zombie processes
[2026-01-09 22:38:19] 2026-01-10 03:37:41,764 | INFO     | will attempt to kill all subprocesses of pid=976402
[2026-01-09 22:38:19] 2026-01-10 03:37:42,178 | INFO     | process IDs to be killed: [976402] (in reverse order)
[2026-01-09 22:38:19] 2026-01-10 03:37:42,334 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:38:19] 2026-01-10 03:37:42,334 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:38:19] 2026-01-10 03:37:42,354 | INFO     | did not find any defunct processes belonging to 976402
[2026-01-09 22:38:19] 2026-01-10 03:37:42,373 | INFO     | did not find any defunct processes belonging to 976402
[2026-01-09 22:38:19] 2026-01-10 03:37:42,373 | INFO     | ready for new job
[2026-01-09 22:38:19] 2026-01-10 03:37:42,373 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:38:19] 2026-01-10 03:37:42,376 | INFO     | ***************************************
[2026-01-09 22:38:19] 2026-01-10 03:37:42,380 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:38:19] 2026-01-10 03:37:42,380 | INFO     | ***************************************
[2026-01-09 22:38:19] 2026-01-10 03:37:42,380 | INFO     | 
[2026-01-09 22:38:19] 2026-01-10 03:37:42,385 | INFO     | architecture information:
[2026-01-09 22:38:19] 2026-01-10 03:37:42,385 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:38:19] 2026-01-10 03:37:42,410 | INFO     | cat /etc/os-release:
[2026-01-09 22:38:19] NAME="CentOS Linux"
[2026-01-09 22:38:19] VERSION="7 (Core)"
[2026-01-09 22:38:19] ID="centos"
[2026-01-09 22:38:19] ID_LIKE="rhel fedora"
[2026-01-09 22:38:19] VERSION_ID="7"
[2026-01-09 22:38:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:38:19] ANSI_COLOR="0;31"
[2026-01-09 22:38:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:38:19] HOME_URL="https://www.centos.org/"
[2026-01-09 22:38:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:38:19] 
[2026-01-09 22:38:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:38:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:38:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:38:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:38:19] 
[2026-01-09 22:38:19] 2026-01-10 03:37:42,410 | INFO     | ***************************************
[2026-01-09 22:38:19] 2026-01-10 03:37:42,922 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 22:38:19] 2026-01-10 03:37:42,937 | INFO     | sufficient remaining disk space (75477549056 B)
[2026-01-09 22:38:19] 2026-01-10 03:37:42,938 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:38:19] 2026-01-10 03:37:42,938 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:38:19] 2026-01-10 03:37:42,938 | INFO     | update_server=False
[2026-01-09 22:38:19] 2026-01-10 03:37:42,938 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:38:19] 2026-01-10 03:37:42,938 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:38:19] 2026-01-10 03:37:43,247 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 22:38:19] 2026-01-10 03:37:43,248 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 22:38:19] 2026-01-10 03:37:43,248 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:38:19] 2026-01-10 03:37:43,248 | INFO     | will abort loop
[2026-01-09 22:38:19] 2026-01-10 03:37:43,472 | INFO     | all data control threads have been joined
[2026-01-09 22:38:19] 2026-01-10 03:37:43,944 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:37:44,116 | INFO     | all payload control threads have been joined
[2026-01-09 22:38:19] 2026-01-10 03:37:44,254 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:37:44,267 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:37:44,478 | INFO     | [data] control thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:37:44,552 | INFO     | all job control threads have been joined
[2026-01-09 22:38:19] 2026-01-10 03:37:44,566 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:37:44,630 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:37:44,636 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:37:44,754 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:37:44,945 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:37:45,023 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:37:45,066 | INFO     | [job] validate thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:37:45,107 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:38:19] 2026-01-10 03:37:45,122 | INFO     | [payload] control thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:37:45,343 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:37:45,558 | INFO     | [job] control thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:37:45,724 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:38:19] 2026-01-10 03:37:46,730 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:37:49,116 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:38:19] 2026-01-10 03:38:12,999 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:38:19] 2026-01-10 03:38:14,086 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140140241254208)>', '<ExcThread(monitor, started 140139967780608)>']
[2026-01-09 22:38:19] 2026-01-10 03:38:14,676 | INFO     | PID=965614 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 22:38:19] 2026-01-10 03:38:14,676 | INFO     | .. there are 14 such processes running
[2026-01-09 22:38:19] 2026-01-10 03:38:14,677 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:38:19] 2026-01-10 03:38:14,677 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:38:19] 2026-01-10 03:38:14,677 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:38:19] 2026-01-10 03:38:14,677 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:38:19] 2026-01-10 03:38:14,677 | INFO     | [monitor] control thread has ended
[2026-01-09 22:38:19] 2026-01-10 03:38:19,111 | INFO     | all workflow threads have been joined
[2026-01-09 22:38:19] 2026-01-10 03:38:19,112 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:38:19] 2026-01-10 03:38:19,112 | INFO     | traces error code: 0
[2026-01-09 22:38:19] 2026-01-10 03:38:19,112 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:38:19] 2026-01-10 03:38:19,321 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:38:19] 2026-01-10 03:38:19,324 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:38:19] 2026-01-10 03:38:19,326 [wrapper] pilotpid: 965614
[2026-01-09 22:38:19] 2026-01-10 03:38:19,328 [wrapper] Pilot exit status: 0
[2026-01-09 22:38:19] 2026-01-10 03:38:19,378 [wrapper] pandaids: 6961933447
[2026-01-09 22:38:19] 2026-01-10 03:38:19,479 [wrapper] cleanup supervisor_pilot 1457646 965615
[2026-01-09 22:38:19] 2026-01-10 03:38:19,485 [wrapper] Test setup, not cleaning
[2026-01-09 22:38:19] 2026-01-10 03:38:19,487 [wrapper] apfmon messages muted
[2026-01-09 22:38:19] 2026-01-10 03:38:19,489 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:38:19] 2026-01-10 03:38:19,501 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:38:19]  *** Error codes and diagnostics ***
[2026-01-09 22:38:19]     "exeErrorCode": 0,
[2026-01-09 22:38:19]     "exeErrorDiag": "",
[2026-01-09 22:38:19]     "pilotErrorCode": 0,
[2026-01-09 22:38:19]     "pilotErrorDiag": "",
[2026-01-09 22:38:19]  *** Listing of results directory ***
[2026-01-09 22:38:19] total 440020
[2026-01-09 22:38:19] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 08:00 pilot3.tar.gz
[2026-01-09 22:38:19] -rwx------. 1 boincer umatlas     36322 Jan  7 08:04 runpilot2-wrapper.sh
[2026-01-09 22:38:19] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 08:05 queuedata.json
[2026-01-09 22:38:19] -rw-r--r--. 1 boincer umatlas       100 Jan  9 18:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:38:19] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 18:58 run_atlas
[2026-01-09 22:38:19] -rw-r--r--. 1 boincer umatlas       105 Jan  9 18:58 job.xml
[2026-01-09 22:38:19] -rw-r--r--. 2 boincer umatlas 226994775 Jan  9 18:58 EVNT.47898824._000107.pool.root.1
[2026-01-09 22:38:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:58 start_atlas.sh
[2026-01-09 22:38:19] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 18:58 shared
[2026-01-09 22:38:19] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 18:58 input.tar.gz
[2026-01-09 22:38:19] -rw-r--r--. 1 boincer umatlas         0 Jan  9 18:58 boinc_lockfile
[2026-01-09 22:38:19] -rw-r--r--. 1 boincer umatlas      2515 Jan  9 18:58 pandaJob.out
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas        57 Jan  9 18:58 setup.sh.local
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas    989374 Jan  9 18:58 agis_schedconf.cvmfs.json
[2026-01-09 22:38:19] drwx------. 5 boincer umatlas      4096 Jan  9 18:58 pilot3
[2026-01-09 22:38:19] -rw-r--r--. 1 boincer umatlas      6945 Jan  9 22:36 init_data.xml
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas 215310215 Jan  9 22:36 HITS.47898826._007096.pool.root.1
[2026-01-09 22:38:19] -rw-r--r--. 1 boincer umatlas       531 Jan  9 22:36 boinc_task_state.xml
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas      1031 Jan  9 22:37 memory_monitor_summary.json
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas   1516240 Jan  9 22:37 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas    434754 Jan  9 22:37 log.47898826._007096.job.log.tgz.1
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas      7771 Jan  9 22:37 heartbeat.json
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas        95 Jan  9 22:38 pilot_heartbeat.json
[2026-01-09 22:38:19] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 22:38 boinc_mmap_file
[2026-01-09 22:38:19] -rw-r--r--. 1 boincer umatlas        28 Jan  9 22:38 wrapper_checkpoint.txt
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas      5009 Jan  9 22:38 pilotlog.txt
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas   1742456 Jan  9 22:38 log.47898826._007096.job.log.1
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas       357 Jan  9 22:38 output.list
[2026-01-09 22:38:19] -rw-r--r--. 1 boincer umatlas       620 Jan  9 22:38 runtime_log
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas   2201600 Jan  9 22:38 result.tar.gz
[2026-01-09 22:38:19] -rw-r--r--. 1 boincer umatlas      9338 Jan  9 22:38 runtime_log.err
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas       658 Jan  9 22:38 JSKNDmOOix8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3zhKDm50F24n.diag
[2026-01-09 22:38:19] -rw-r--r--. 1 boincer umatlas     21067 Jan  9 22:38 stderr.txt
[2026-01-09 22:38:19] HITS file was successfully produced:
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas 215310215 Jan  9 22:36 shared/HITS.pool.root.1
[2026-01-09 22:38:19]  *** Contents of shared directory: ***
[2026-01-09 22:38:19] total 434692
[2026-01-09 22:38:19] -rw-r--r--. 2 boincer umatlas 226994775 Jan  9 18:58 ATLAS.root_0
[2026-01-09 22:38:19] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:58 start_atlas.sh
[2026-01-09 22:38:19] -rw-r--r--. 2 boincer umatlas    592404 Jan  9 18:58 input.tar.gz
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas 215310215 Jan  9 22:36 HITS.pool.root.1
[2026-01-09 22:38:19] -rw-------. 1 boincer umatlas   2201600 Jan  9 22:38 result.tar.gz
22:38:21 (960381): run_atlas exited; CPU time 42450.873484
22:38:21 (960381): called boinc_finish(0)

</stderr_txt>
]]>

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