Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:02:33 (11344): wrapper (7.7.26015): starting
02:02:33 (11344): wrapper: running run_atlas (--nthreads 8)
[2026-01-11 02:02:33] Arguments: --nthreads 8
[2026-01-11 02:02:33] Threads: 8
[2026-01-11 02:02:33] Checking for CVMFS
[2026-01-11 02:02:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 02:02:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 02:02:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 02:02:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 02:02:36] 2.11.2.0 12106 37592 99656 154998 1 63 18116450 25165824 899 130560 0 16154943 99.820 9220545 2890 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-11 02:02:36] CVMFS is ok
[2026-01-11 02:02:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 02:02:36] Checking for apptainer binary...
[2026-01-11 02:02:36] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 02:02:36] Running /usr/bin/apptainer --version
[2026-01-11 02:02:36] apptainer version 1.3.2-1.el7
[2026-01-11 02:02:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 02:02:54] cg-vwn435.simple-grid.lan
[2026-01-11 02:02:54] apptainer works
[2026-01-11 02:02:54] Set ATHENA_PROC_NUMBER=8
[2026-01-11 02:02:54] Set ATHENA_CORE_NUMBER=8
[2026-01-11 02:02:54] Starting ATLAS job with PandaID=6963167888
[2026-01-11 02:02:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 07:58:42]  *** The last 200 lines of the pilot log: ***
[2026-01-11 07:58:42] 2026-01-11 06:57:33,149 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2026-01-11 07:58:42] 2026-01-11 06:57:33,151 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6963167888/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 07:58:42] 2026-01-11 06:57:33,151 | INFO     | extracted standard info from prmon json
[2026-01-11 07:58:42] 2026-01-11 06:57:33,151 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 07:58:42] 2026-01-11 06:57:33,152 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 07:58:42] 2026-01-11 06:57:33,152 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 07:58:42] 2026-01-11 06:57:33,152 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 07:58:42] 2026-01-11 06:57:33,159 | INFO     | fitting pss+swap vs Time
[2026-01-11 07:58:42] 2026-01-11 06:57:33,174 | INFO     | sum of square deviations: 11657595320.0
[2026-01-11 07:58:42] 2026-01-11 06:57:33,178 | INFO     | sum of deviations: 102219257574.00002
[2026-01-11 07:58:42] 2026-01-11 06:57:33,178 | INFO     | mean x: 1768104340.0
[2026-01-11 07:58:42] 2026-01-11 06:57:33,178 | INFO     | mean y: 2457470.7462686566
[2026-01-11 07:58:42] 2026-01-11 06:57:33,178 | INFO     | intersect: -15501109773.35732
[2026-01-11 07:58:42] 2026-01-11 06:57:33,179 | INFO     | chi2: 9.735603296130124
[2026-01-11 07:58:42] 2026-01-11 06:57:33,179 | INFO     | sum of square deviations: 11143362422.5
[2026-01-11 07:58:42] 2026-01-11 06:57:33,183 | INFO     | sum of deviations: 145785980313.50003
[2026-01-11 07:58:42] 2026-01-11 06:57:33,183 | INFO     | mean x: 1768104187.5
[2026-01-11 07:58:42] 2026-01-11 06:57:33,183 | INFO     | mean y: 2470270.227272727
[2026-01-11 07:58:42] 2026-01-11 06:57:33,183 | INFO     | intersect: -23129219474.569054
[2026-01-11 07:58:42] 2026-01-11 06:57:33,184 | INFO     | chi2: 8.25053544373642
[2026-01-11 07:58:42] 2026-01-11 06:57:33,184 | INFO     | current chi2=8.25053544373642 (change=15.253988964238255 %)
[2026-01-11 07:58:42] 2026-01-11 06:57:33,184 | INFO     | right removable region: 329
[2026-01-11 07:58:42] 2026-01-11 06:57:33,185 | INFO     | sum of square deviations: 11143362422.5
[2026-01-11 07:58:42] 2026-01-11 06:57:33,188 | INFO     | sum of deviations: -16512257231.500023
[2026-01-11 07:58:42] 2026-01-11 06:57:33,188 | INFO     | mean x: 1768104492.5
[2026-01-11 07:58:42] 2026-01-11 06:57:33,189 | INFO     | mean y: 2492666.6575757577
[2026-01-11 07:58:42] 2026-01-11 06:57:33,189 | INFO     | intersect: 2622473520.316363
[2026-01-11 07:58:42] 2026-01-11 06:57:33,189 | INFO     | chi2: 4.744475464785507
[2026-01-11 07:58:42] 2026-01-11 06:57:33,189 | INFO     | current chi2=4.744475464785507 (change=51.26675440163607 %)
[2026-01-11 07:58:42] 2026-01-11 06:57:33,190 | INFO     | sum of square deviations: 10644478650.0
[2026-01-11 07:58:42] 2026-01-11 06:57:33,193 | INFO     | sum of deviations: -106019702205.0
[2026-01-11 07:58:42] 2026-01-11 06:57:33,194 | INFO     | mean x: 1768104645.0
[2026-01-11 07:58:42] 2026-01-11 06:57:33,194 | INFO     | mean y: 2519998.8584615383
[2026-01-11 07:58:42] 2026-01-11 06:57:33,194 | INFO     | intersect: 17612957681.51352
[2026-01-11 07:58:42] 2026-01-11 06:57:33,194 | INFO     | chi2: 2.0291469526697243
[2026-01-11 07:58:42] 2026-01-11 06:57:33,194 | INFO     | current chi2=2.0291469526697243 (change=57.231374306169805 %)
[2026-01-11 07:58:42] 2026-01-11 06:57:33,195 | INFO     | sum of square deviations: 10160711440.0
[2026-01-11 07:58:42] 2026-01-11 06:57:33,198 | INFO     | sum of deviations: -119998401601.49997
[2026-01-11 07:58:42] 2026-01-11 06:57:33,198 | INFO     | mean x: 1768104797.5
[2026-01-11 07:58:42] 2026-01-11 06:57:33,199 | INFO     | mean y: 2524383.303125
[2026-01-11 07:58:42] 2026-01-11 06:57:33,199 | INFO     | intersect: 20883911559.469578
[2026-01-11 07:58:42] 2026-01-11 06:57:33,199 | INFO     | chi2: 1.9100296367272889
[2026-01-11 07:58:42] 2026-01-11 06:57:33,199 | INFO     | current chi2=1.9100296367272889 (change=5.870314901821883 %)
[2026-01-11 07:58:42] 2026-01-11 06:57:33,200 | INFO     | left removable region: 30
[2026-01-11 07:58:42] 2026-01-11 06:57:33,200 | INFO     | sum of square deviations: 8288713550.0
[2026-01-11 07:58:42] 2026-01-11 06:57:33,203 | INFO     | sum of deviations: -54442724601.99999
[2026-01-11 07:58:42] 2026-01-11 06:57:33,203 | INFO     | mean x: 1768105072.0
[2026-01-11 07:58:42] 2026-01-11 06:57:33,203 | INFO     | mean y: 2531703.923076923
[2026-01-11 07:58:42] 2026-01-11 06:57:33,203 | INFO     | intersect: 11615969292.473278
[2026-01-11 07:58:42] 2026-01-11 06:57:33,204 | INFO     | chi2: 0.239113144779373
[2026-01-11 07:58:42] 2026-01-11 06:57:33,204 | INFO     | current memory leak: -6.57 B/s (using 299 data points, chi2=0.24)
[2026-01-11 07:58:42] 2026-01-11 06:57:33,205 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-11 07:58:42] 2026-01-11 06:57:33,205 | INFO     | ..............................
[2026-01-11 07:58:42] 2026-01-11 06:57:33,205 | INFO     | . Timing measurements:
[2026-01-11 07:58:42] 2026-01-11 06:57:33,205 | INFO     | . get job = 0 s
[2026-01-11 07:58:42] 2026-01-11 06:57:33,205 | INFO     | . initial setup = 10 s
[2026-01-11 07:58:42] 2026-01-11 06:57:33,205 | INFO     | . payload setup = 153 s
[2026-01-11 07:58:42] 2026-01-11 06:57:33,205 | INFO     | . stage-in = 0 s
[2026-01-11 07:58:42] 2026-01-11 06:57:33,205 | INFO     | . payload execution = 20546 s
[2026-01-11 07:58:42] 2026-01-11 06:57:33,205 | INFO     | . stage-out = 3 s
[2026-01-11 07:58:42] 2026-01-11 06:57:33,206 | INFO     | . log creation = 1 s
[2026-01-11 07:58:42] 2026-01-11 06:57:33,206 | INFO     | ..............................
[2026-01-11 07:58:42] 2026-01-11 06:57:33,339 | INFO     | 
[2026-01-11 07:58:42] 2026-01-11 06:57:33,340 | INFO     | job summary report
[2026-01-11 07:58:42] 2026-01-11 06:57:33,340 | INFO     | --------------------------------------------------
[2026-01-11 07:58:42] 2026-01-11 06:57:33,340 | INFO     | PanDA job id: 6963167888
[2026-01-11 07:58:42] 2026-01-11 06:57:33,340 | INFO     | task id: 47898826
[2026-01-11 07:58:42] 2026-01-11 06:57:33,340 | INFO     | errors: (none)
[2026-01-11 07:58:42] 2026-01-11 06:57:33,340 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 07:58:42] 2026-01-11 06:57:33,340 | INFO     | pilot state: finished 
[2026-01-11 07:58:42] 2026-01-11 06:57:33,340 | INFO     | transexitcode: 0
[2026-01-11 07:58:42] 2026-01-11 06:57:33,341 | INFO     | exeerrorcode: 0
[2026-01-11 07:58:42] 2026-01-11 06:57:33,341 | INFO     | exeerrordiag: 
[2026-01-11 07:58:42] 2026-01-11 06:57:33,341 | INFO     | exitcode: 0
[2026-01-11 07:58:42] 2026-01-11 06:57:33,341 | INFO     | exitmsg: OK
[2026-01-11 07:58:42] 2026-01-11 06:57:33,341 | INFO     | cpuconsumptiontime: 76992 s
[2026-01-11 07:58:42] 2026-01-11 06:57:33,341 | INFO     | nevents: 400
[2026-01-11 07:58:42] 2026-01-11 06:57:33,341 | INFO     | neventsw: 0
[2026-01-11 07:58:42] 2026-01-11 06:57:33,341 | INFO     | pid: 21565
[2026-01-11 07:58:42] 2026-01-11 06:57:33,341 | INFO     | pgrp: 21565
[2026-01-11 07:58:42] 2026-01-11 06:57:33,342 | INFO     | corecount: 8
[2026-01-11 07:58:42] 2026-01-11 06:57:33,342 | INFO     | event service: False
[2026-01-11 07:58:42] 2026-01-11 06:57:33,342 | INFO     | sizes: {0: 2283143, 1: 2283828, 2: 2284027, 13: 2284027, 23: 2284083, 34: 2284111, 45: 2284267, 56: 2284295, 66: 2284323, 77: 2284351, 88: 2284407, 99: 2284715, 10
[2026-01-11 07:58:42] 2026-01-11 06:57:33,342 | INFO     | --------------------------------------------------
[2026-01-11 07:58:42] 2026-01-11 06:57:33,342 | INFO     | 
[2026-01-11 07:58:42] 2026-01-11 06:57:33,342 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2026-01-11 07:58:42] 2026-01-11 06:57:33,910 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,911 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,911 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,911 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,911 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,911 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,911 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,911 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,911 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,912 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,912 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,912 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,912 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,912 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,912 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,912 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,912 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,912 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 07:58:42] 2026-01-11 06:57:33,913 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,913 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 07:58:42] 2026-01-11 06:57:33,913 | INFO     | job 6963167888 has completed (purged errors)
[2026-01-11 07:58:42] 2026-01-11 06:57:33,913 | INFO     | overall cleanup function is called
[2026-01-11 07:58:42] 2026-01-11 06:57:34,922 | INFO     | --- collectZombieJob: --- 10, [21565]
[2026-01-11 07:58:42] 2026-01-11 06:57:34,923 | INFO     | zombie collector waiting for pid 21565
[2026-01-11 07:58:42] 2026-01-11 06:57:34,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 07:58:42] 2026-01-11 06:57:34,923 | INFO     | collected zombie processes
[2026-01-11 07:58:42] 2026-01-11 06:57:34,923 | INFO     | will attempt to kill all subprocesses of pid=21565
[2026-01-11 07:58:42] 2026-01-11 06:57:35,015 | INFO     | process IDs to be killed: [21565] (in reverse order)
[2026-01-11 07:58:42] 2026-01-11 06:57:36,141 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 07:58:42] 2026-01-11 06:57:36,141 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 07:58:42] 2026-01-11 06:57:36,143 | INFO     | did not find any defunct processes belonging to 21565
[2026-01-11 07:58:42] 2026-01-11 06:57:36,145 | INFO     | did not find any defunct processes belonging to 21565
[2026-01-11 07:58:42] 2026-01-11 06:57:36,145 | INFO     | ready for new job
[2026-01-11 07:58:42] 2026-01-11 06:57:36,145 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 07:58:42] 2026-01-11 06:57:36,148 | INFO     | ***************************************
[2026-01-11 07:58:42] 2026-01-11 06:57:36,148 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 07:58:42] 2026-01-11 06:57:36,148 | INFO     | ***************************************
[2026-01-11 07:58:42] 2026-01-11 06:57:36,148 | INFO     | 
[2026-01-11 07:58:42] 2026-01-11 06:57:36,149 | INFO     | pilot is running in a VM
[2026-01-11 07:58:42] 2026-01-11 06:57:36,149 | INFO     | architecture information:
[2026-01-11 07:58:42] 2026-01-11 06:57:36,162 | INFO     | executing command: cat /etc/os-release
[2026-01-11 07:58:42] 2026-01-11 06:57:36,384 | INFO     | cat /etc/os-release:
[2026-01-11 07:58:42] NAME="CentOS Linux"
[2026-01-11 07:58:42] VERSION="7 (Core)"
[2026-01-11 07:58:42] ID="centos"
[2026-01-11 07:58:42] ID_LIKE="rhel fedora"
[2026-01-11 07:58:42] VERSION_ID="7"
[2026-01-11 07:58:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 07:58:42] ANSI_COLOR="0;31"
[2026-01-11 07:58:42] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 07:58:42] HOME_URL="https://www.centos.org/"
[2026-01-11 07:58:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 07:58:42] 
[2026-01-11 07:58:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 07:58:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 07:58:42] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 07:58:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 07:58:42] 
[2026-01-11 07:58:42] 2026-01-11 06:57:36,384 | INFO     | ***************************************
[2026-01-11 07:58:42] 2026-01-11 06:57:36,888 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2026-01-11 07:58:42] 2026-01-11 06:57:37,190 | INFO     | sufficient remaining disk space (496609787904 B)
[2026-01-11 07:58:42] 2026-01-11 06:57:37,191 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 07:58:42] 2026-01-11 06:57:37,191 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 07:58:42] 2026-01-11 06:57:37,191 | INFO     | update_server=False
[2026-01-11 07:58:42] 2026-01-11 06:57:37,191 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 07:58:42] 2026-01-11 06:57:37,198 | INFO     | all job control threads have been joined
[2026-01-11 07:58:42] 2026-01-11 06:57:37,268 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 07:58:42] 2026-01-11 06:57:37,269 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 07:58:42] 2026-01-11 06:57:37,269 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:58:42] 2026-01-11 06:57:37,269 | INFO     | will abort loop
[2026-01-11 07:58:42] 2026-01-11 06:57:37,298 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 07:58:42] 2026-01-11 06:57:38,028 | INFO     | all data control threads have been joined
[2026-01-11 07:58:42] 2026-01-11 06:57:38,198 | INFO     | [job] retrieve thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:57:38,204 | INFO     | [job] control thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:57:38,274 | INFO     | [job] job monitor thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:57:38,353 | INFO     | all payload control threads have been joined
[2026-01-11 07:58:42] 2026-01-11 06:57:38,357 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 07:58:42] 2026-01-11 06:57:38,484 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:57:38,867 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:57:38,887 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:57:38,991 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:57:39,034 | INFO     | [data] control thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:57:39,047 | INFO     | [payload] validate_post thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:57:39,244 | INFO     | [payload] failed_post thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:57:39,305 | INFO     | [data] copytool_out thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:57:39,359 | INFO     | [payload] control thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:57:39,364 | INFO     | [job] queue monitor thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:57:39,435 | INFO     | [data] copytool_in thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:57:39,525 | INFO     | [job] validate thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:57:40,567 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 07:58:42] 2026-01-11 06:57:44,576 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 07:58:42] 2026-01-11 06:58:05,405 | INFO     | PID=15112 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-11 07:58:42] 2026-01-11 06:58:05,406 | INFO     | .. there are 2 such processes running
[2026-01-11 07:58:42] 2026-01-11 06:58:05,411 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 07:58:42] 2026-01-11 06:58:05,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 07:58:42] 2026-01-11 06:58:05,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 07:58:42] 2026-01-11 06:58:29,837 | INFO     | [monitor] cgroup control has ended
[2026-01-11 07:58:42] 2026-01-11 06:58:31,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140527741146944)>', '<ExcThread(monitor, started 140527001384704)>']
[2026-01-11 07:58:42] 2026-01-11 06:58:32,573 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 07:58:42] 2026-01-11 06:58:32,574 | INFO     | [monitor] control thread has ended
[2026-01-11 07:58:42] 2026-01-11 06:58:36,602 | INFO     | all workflow threads have been joined
[2026-01-11 07:58:42] 2026-01-11 06:58:36,603 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 07:58:42] 2026-01-11 06:58:36,603 | INFO     | traces error code: 0
[2026-01-11 07:58:42] 2026-01-11 06:58:36,603 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 07:58:42] 2026-01-11 06:58:37,005 [wrapper] ==== pilot stdout END ====
[2026-01-11 07:58:42] 2026-01-11 06:58:37,099 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 07:58:42] 2026-01-11 06:58:37,193 [wrapper] pilotpid: 15112
[2026-01-11 07:58:42] 2026-01-11 06:58:37,299 [wrapper] Pilot exit status: 0
[2026-01-11 07:58:42] 2026-01-11 06:58:37,800 [wrapper] pandaids: 6963167888
[2026-01-11 07:58:42] 2026-01-11 06:58:38,859 [wrapper] cleanup supervisor_pilot 20695 15113
[2026-01-11 07:58:42] 2026-01-11 06:58:38,973 [wrapper] Test setup, not cleaning
[2026-01-11 07:58:42] 2026-01-11 06:58:39,072 [wrapper] apfmon messages muted
[2026-01-11 07:58:42] 2026-01-11 06:58:39,170 [wrapper] ==== wrapper stdout END ====
[2026-01-11 07:58:42] 2026-01-11 06:58:39,277 [wrapper] ==== wrapper stderr END ====
[2026-01-11 07:58:42]  *** Error codes and diagnostics ***
[2026-01-11 07:58:42]     "exeErrorCode": 0,
[2026-01-11 07:58:42]     "exeErrorDiag": "",
[2026-01-11 07:58:42]     "pilotErrorCode": 0,
[2026-01-11 07:58:42]     "pilotErrorDiag": "",
[2026-01-11 07:58:42]  *** Listing of results directory ***
[2026-01-11 07:58:42] total 443800
[2026-01-11 07:58:42] -rw-r--r--. 1 boinc boinc    579449 Jan  9 01:57 pilot3.tar.gz
[2026-01-11 07:58:42] -rwx------. 1 boinc boinc     36322 Jan  9 01:59 runpilot2-wrapper.sh
[2026-01-11 07:58:42] -rw-r--r--. 1 boinc boinc      5112 Jan  9 02:03 queuedata.json
[2026-01-11 07:58:42] -rw-r--r--. 1 boinc boinc       100 Jan 11 02:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 07:58:42] -rwxr-xr-x. 1 boinc boinc      7986 Jan 11 02:02 run_atlas
[2026-01-11 07:58:42] -rw-r--r--. 1 boinc boinc       105 Jan 11 02:02 job.xml
[2026-01-11 07:58:42] -rw-r--r--. 1 boinc boinc      6390 Jan 11 02:02 init_data.xml
[2026-01-11 07:58:42] -rw-r--r--. 2 boinc boinc 224693909 Jan 11 02:02 EVNT.47898824._001342.pool.root.1
[2026-01-11 07:58:42] -rw-r--r--. 2 boinc boinc     15847 Jan 11 02:02 start_atlas.sh
[2026-01-11 07:58:42] drwxrwx--x. 2 boinc boinc        68 Jan 11 02:02 shared
[2026-01-11 07:58:42] -rw-r--r--. 2 boinc boinc    592399 Jan 11 02:02 input.tar.gz
[2026-01-11 07:58:42] -rw-r--r--. 1 boinc boinc         0 Jan 11 02:02 boinc_lockfile
[2026-01-11 07:58:42] -rw-r--r--. 1 boinc boinc      2520 Jan 11 02:02 pandaJob.out
[2026-01-11 07:58:42] -rw-------. 1 boinc boinc    989540 Jan 11 02:06 agis_schedconf.cvmfs.json
[2026-01-11 07:58:42] drwx------. 5 boinc boinc      4096 Jan 11 02:06 pilot3
[2026-01-11 07:58:42] -rw-------. 1 boinc boinc 219173838 Jan 11 07:54 HITS.47898826._036090.pool.root.1
[2026-01-11 07:58:42] -rw-r--r--. 1 boinc boinc       531 Jan 11 07:54 boinc_task_state.xml
[2026-01-11 07:58:42] -rw-------. 1 boinc boinc      1011 Jan 11 07:55 memory_monitor_summary.json
[2026-01-11 07:58:42] -rw-------. 1 boinc boinc   1516240 Jan 11 07:55 agis_ddmendpoints.agis.ALL.json
[2026-01-11 07:58:42] -rw-------. 1 boinc boinc    546185 Jan 11 07:55 log.47898826._036090.job.log.tgz.1
[2026-01-11 07:58:42] -rw-------. 1 boinc boinc      7776 Jan 11 07:57 heartbeat.json
[2026-01-11 07:58:42] -rw-------. 1 boinc boinc        95 Jan 11 07:58 pilot_heartbeat.json
[2026-01-11 07:58:42] -rw-------. 1 boinc boinc      5070 Jan 11 07:58 pilotlog.txt
[2026-01-11 07:58:42] -rw-------. 1 boinc boinc   2797168 Jan 11 07:58 log.47898826._036090.job.log.1
[2026-01-11 07:58:42] -rw-------. 1 boinc boinc       357 Jan 11 07:58 output.list
[2026-01-11 07:58:42] -rw-r--r--. 1 boinc boinc       620 Jan 11 07:58 runtime_log
[2026-01-11 07:58:42] -rw-------. 1 boinc boinc   3358720 Jan 11 07:58 result.tar.gz
[2026-01-11 07:58:42] -rw-r--r--. 1 boinc boinc      8192 Jan 11 07:58 boinc_mmap_file
[2026-01-11 07:58:42] -rw-r--r--. 1 boinc boinc      8817 Jan 11 07:58 runtime_log.err
[2026-01-11 07:58:42] -rw-------. 1 boinc boinc       657 Jan 11 07:58 9IiLDmZ1Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFngKDmJklkCo.diag
[2026-01-11 07:58:42] -rw-r--r--. 1 boinc boinc        28 Jan 11 07:58 wrapper_checkpoint.txt
[2026-01-11 07:58:42] -rw-r--r--. 1 boinc boinc     20792 Jan 11 07:58 stderr.txt
[2026-01-11 07:58:42] HITS file was successfully produced:
[2026-01-11 07:58:42] -rw-------. 1 boinc boinc 219173838 Jan 11 07:54 shared/HITS.pool.root.1
[2026-01-11 07:58:42]  *** Contents of shared directory: ***
[2026-01-11 07:58:42] total 437344
[2026-01-11 07:58:42] -rw-r--r--. 2 boinc boinc 224693909 Jan 11 02:02 ATLAS.root_0
[2026-01-11 07:58:42] -rw-r--r--. 2 boinc boinc     15847 Jan 11 02:02 start_atlas.sh
[2026-01-11 07:58:42] -rw-r--r--. 2 boinc boinc    592399 Jan 11 02:02 input.tar.gz
[2026-01-11 07:58:42] -rw-------. 1 boinc boinc 219173838 Jan 11 07:54 HITS.pool.root.1
[2026-01-11 07:58:42] -rw-------. 1 boinc boinc   3358720 Jan 11 07:58 result.tar.gz
07:58:44 (11344): run_atlas exited; CPU time 77185.978949
07:58:44 (11344): called boinc_finish(0)

</stderr_txt>
]]>

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