Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:00:32 (458874): wrapper (7.7.26015): starting
19:00:32 (458874): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:00:32] Arguments: --nthreads 8
[2026-01-09 19:00:32] Threads: 8
[2026-01-09 19:00:32] Checking for CVMFS
[2026-01-09 19:00:33] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:00:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:00:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:00:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:00:34] 2.13.3.0 11226 92405 338172 154961 2 175 17684268 32935936 12084 16776704 0 216032329 99.405 353383321 38892 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 19:00:34] CVMFS is ok
[2026-01-09 19:00:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:00:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:00:34] Further information can be found at the LHC@home message board.
[2026-01-09 19:00:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:00:34] Checking for apptainer binary...
[2026-01-09 19:00:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:00:34] Running /usr/bin/apptainer --version
[2026-01-09 19:00:34] apptainer version 1.4.5-2.el9
[2026-01-09 19:00:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:00:35] c6-2-29-3.aglt2.org
[2026-01-09 19:00:35] apptainer works
[2026-01-09 19:00:35] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:00:35] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:00:35] Starting ATLAS job with PandaID=6962314822
[2026-01-09 19:00:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 03:00:28]  *** The last 200 lines of the pilot log: ***
[2026-01-10 03:00:28] 2026-01-10 07:59:40,802 | INFO     | monitor loop #1803: job 0:6962314822 is in state 'finished'
[2026-01-10 03:00:28] 2026-01-10 07:59:40,806 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 03:00:28] 2026-01-10 07:59:40,979 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 03:00:28] 2026-01-10 07:59:40,983 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2953.7141964285715
[2026-01-10 03:00:28] 2026-01-10 07:59:41,004 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962314822/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 03:00:28] 2026-01-10 07:59:41,005 | INFO     | extracted standard info from prmon json
[2026-01-10 03:00:28] 2026-01-10 07:59:41,005 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 03:00:28] 2026-01-10 07:59:41,005 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 03:00:28] 2026-01-10 07:59:41,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 03:00:28] 2026-01-10 07:59:41,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 03:00:28] 2026-01-10 07:59:41,079 | INFO     | fitting pss+swap vs Time
[2026-01-10 03:00:28] 2026-01-10 07:59:41,080 | INFO     | sum of square deviations: 31580627894.85218
[2026-01-10 03:00:28] 2026-01-10 07:59:41,124 | INFO     | sum of deviations: -65695419386.25481
[2026-01-10 03:00:28] 2026-01-10 07:59:41,124 | INFO     | mean x: 1768017663.7922912
[2026-01-10 03:00:28] 2026-01-10 07:59:41,124 | INFO     | mean y: 2505221.8736616704
[2026-01-10 03:00:28] 2026-01-10 07:59:41,124 | INFO     | intersect: 3680413789.488754
[2026-01-10 03:00:28] 2026-01-10 07:59:41,125 | INFO     | chi2: 4.906764098003181
[2026-01-10 03:00:28] 2026-01-10 07:59:41,126 | INFO     | sum of square deviations: 30577149496.77913
[2026-01-10 03:00:28] 2026-01-10 07:59:41,165 | INFO     | sum of deviations: 55153607637.06486
[2026-01-10 03:00:28] 2026-01-10 07:59:41,166 | INFO     | mean x: 1768017511.2987013
[2026-01-10 03:00:28] 2026-01-10 07:59:41,166 | INFO     | mean y: 2523550.4415584416
[2026-01-10 03:00:28] 2026-01-10 07:59:41,166 | INFO     | intersect: -3186542327.7855806
[2026-01-10 03:00:28] 2026-01-10 07:59:41,171 | INFO     | chi2: 1.9922275507364005
[2026-01-10 03:00:28] 2026-01-10 07:59:41,171 | INFO     | current chi2=1.9922275507364005 (change=59.39834255437017 %)
[2026-01-10 03:00:28] 2026-01-10 07:59:41,171 | INFO     | sum of square deviations: 29595046904.074383
[2026-01-10 03:00:28] 2026-01-10 07:59:41,180 | INFO     | sum of deviations: 54020701227.619225
[2026-01-10 03:00:28] 2026-01-10 07:59:41,180 | INFO     | mean x: 1768017358.796499
[2026-01-10 03:00:28] 2026-01-10 07:59:41,180 | INFO     | mean y: 2523374.512035011
[2026-01-10 03:00:28] 2026-01-10 07:59:41,180 | INFO     | intersect: -3224690213.436063
[2026-01-10 03:00:28] 2026-01-10 07:59:41,181 | INFO     | chi2: 1.9924710836428083
[2026-01-10 03:00:28] 2026-01-10 07:59:41,181 | INFO     | current chi2=1.9924710836428083 (change=-0.012224151117570142 %)
[2026-01-10 03:00:28] 2026-01-10 07:59:41,181 | INFO     | right removable region: 456
[2026-01-10 03:00:28] 2026-01-10 07:59:41,181 | INFO     | sum of square deviations: 30576980282.779152
[2026-01-10 03:00:28] 2026-01-10 07:59:41,194 | INFO     | sum of deviations: -156507632356.27274
[2026-01-10 03:00:28] 2026-01-10 07:59:41,194 | INFO     | mean x: 1768017816.2987013
[2026-01-10 03:00:28] 2026-01-10 07:59:41,194 | INFO     | mean y: 2518967.0454545454
[2026-01-10 03:00:28] 2026-01-10 07:59:41,194 | INFO     | intersect: 9052081083.173004
[2026-01-10 03:00:28] 2026-01-10 07:59:41,195 | INFO     | chi2: 3.034708210001994
[2026-01-10 03:00:28] 2026-01-10 07:59:41,195 | INFO     | current chi2=3.034708210001994 (change=38.15255534218619 %)
[2026-01-10 03:00:28] 2026-01-10 07:59:41,196 | INFO     | sum of square deviations: 29594934420.07437
[2026-01-10 03:00:28] 2026-01-10 07:59:41,204 | INFO     | sum of deviations: -157326520416.6039
[2026-01-10 03:00:28] 2026-01-10 07:59:41,204 | INFO     | mean x: 1768017968.796499
[2026-01-10 03:00:28] 2026-01-10 07:59:41,204 | INFO     | mean y: 2519087.1225382932
[2026-01-10 03:00:28] 2026-01-10 07:59:41,204 | INFO     | intersect: 9401293590.779165
[2026-01-10 03:00:28] 2026-01-10 07:59:41,205 | INFO     | chi2: 3.023147994748903
[2026-01-10 03:00:28] 2026-01-10 07:59:41,209 | INFO     | current chi2=3.023147994748903 (change=0.38093333701705534 %)
[2026-01-10 03:00:28] 2026-01-10 07:59:41,209 | INFO     | left removable region: 20
[2026-01-10 03:00:28] 2026-01-10 07:59:41,210 | INFO     | sum of square deviations: 25699654914.036648
[2026-01-10 03:00:28] 2026-01-10 07:59:41,218 | INFO     | sum of deviations: -33084174667.265995
[2026-01-10 03:00:28] 2026-01-10 07:59:41,218 | INFO     | mean x: 1768017938.3027523
[2026-01-10 03:00:28] 2026-01-10 07:59:41,218 | INFO     | mean y: 2537083.0550458715
[2026-01-10 03:00:28] 2026-01-10 07:59:41,218 | INFO     | intersect: 2278575982.461427
[2026-01-10 03:00:28] 2026-01-10 07:59:41,218 | INFO     | chi2: 0.0603987747520785
[2026-01-10 03:00:28] 2026-01-10 07:59:41,219 | INFO     | current memory leak: -1.29 B/s (using 436 data points, chi2=0.06)
[2026-01-10 03:00:28] 2026-01-10 07:59:41,219 | INFO     | could have reported an average CPU frequency of 2936 MHz (19 samples)
[2026-01-10 03:00:28] 2026-01-10 07:59:41,219 | INFO     | ..............................
[2026-01-10 03:00:28] 2026-01-10 07:59:41,220 | INFO     | . Timing measurements:
[2026-01-10 03:00:28] 2026-01-10 07:59:41,220 | INFO     | . get job = 0 s
[2026-01-10 03:00:28] 2026-01-10 07:59:41,220 | INFO     | . initial setup = 4 s
[2026-01-10 03:00:28] 2026-01-10 07:59:41,220 | INFO     | . payload setup = 46 s
[2026-01-10 03:00:28] 2026-01-10 07:59:41,220 | INFO     | . stage-in = 0 s
[2026-01-10 03:00:28] 2026-01-10 07:59:41,220 | INFO     | . payload execution = 28510 s
[2026-01-10 03:00:28] 2026-01-10 07:59:41,220 | INFO     | . stage-out = 6 s
[2026-01-10 03:00:28] 2026-01-10 07:59:41,220 | INFO     | . log creation = 0 s
[2026-01-10 03:00:28] 2026-01-10 07:59:41,220 | INFO     | ..............................
[2026-01-10 03:00:28] 2026-01-10 07:59:41,499 | INFO     | 
[2026-01-10 03:00:28] 2026-01-10 07:59:41,499 | INFO     | job summary report
[2026-01-10 03:00:28] 2026-01-10 07:59:41,499 | INFO     | --------------------------------------------------
[2026-01-10 03:00:28] 2026-01-10 07:59:41,499 | INFO     | PanDA job id: 6962314822
[2026-01-10 03:00:28] 2026-01-10 07:59:41,499 | INFO     | task id: 47898826
[2026-01-10 03:00:28] 2026-01-10 07:59:41,499 | INFO     | errors: (none)
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | pilot state: finished 
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | transexitcode: 0
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | exeerrorcode: 0
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | exeerrordiag: 
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | exitcode: 0
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | exitmsg: OK
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | cpuconsumptiontime: 54990 s
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | nevents: 400
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | neventsw: 0
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | pid: 482992
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | pgrp: 482992
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | corecount: 8
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | event service: False
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | sizes: {0: 2283136, 1: 2283737, 2: 2283821, 3: 2283849, 4: 2283877, 5: 2284076, 6: 2284260, 17: 2284288, 28: 2284316, 39: 2284546, 40: 2284634, 50: 2284942, 28561:
[2026-01-10 03:00:28] 2026-01-10 07:59:41,500 | INFO     | --------------------------------------------------
[2026-01-10 03:00:28] 2026-01-10 07:59:41,501 | INFO     | 
[2026-01-10 03:00:28] 2026-01-10 07:59:41,501 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 03:00:28] 2026-01-10 07:59:41,566 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,567 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,567 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,567 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,567 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,567 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,567 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,567 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,567 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,567 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,567 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,567 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,567 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,567 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,568 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,568 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,568 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,568 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 03:00:28] 2026-01-10 07:59:41,568 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,568 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 03:00:28] 2026-01-10 07:59:41,568 | INFO     | job 6962314822 has completed (purged errors)
[2026-01-10 03:00:28] 2026-01-10 07:59:41,568 | INFO     | overall cleanup function is called
[2026-01-10 03:00:28] 2026-01-10 07:59:42,579 | INFO     | --- collectZombieJob: --- 10, [482992]
[2026-01-10 03:00:28] 2026-01-10 07:59:42,579 | INFO     | zombie collector waiting for pid 482992
[2026-01-10 03:00:28] 2026-01-10 07:59:42,579 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 03:00:28] 2026-01-10 07:59:42,579 | INFO     | collected zombie processes
[2026-01-10 03:00:28] 2026-01-10 07:59:42,580 | INFO     | will attempt to kill all subprocesses of pid=482992
[2026-01-10 03:00:28] 2026-01-10 07:59:43,590 | INFO     | process IDs to be killed: [482992] (in reverse order)
[2026-01-10 03:00:28] 2026-01-10 07:59:43,891 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 03:00:28] 2026-01-10 07:59:43,891 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 03:00:28] 2026-01-10 07:59:43,909 | INFO     | did not find any defunct processes belonging to 482992
[2026-01-10 03:00:28] 2026-01-10 07:59:43,930 | INFO     | did not find any defunct processes belonging to 482992
[2026-01-10 03:00:28] 2026-01-10 07:59:43,931 | INFO     | ready for new job
[2026-01-10 03:00:28] 2026-01-10 07:59:43,931 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 03:00:28] 2026-01-10 07:59:43,938 | INFO     | ***************************************
[2026-01-10 03:00:28] 2026-01-10 07:59:43,938 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 03:00:28] 2026-01-10 07:59:43,938 | INFO     | ***************************************
[2026-01-10 03:00:28] 2026-01-10 07:59:43,938 | INFO     | 
[2026-01-10 03:00:28] 2026-01-10 07:59:43,945 | INFO     | architecture information:
[2026-01-10 03:00:28] 2026-01-10 07:59:43,946 | INFO     | executing command: cat /etc/os-release
[2026-01-10 03:00:28] 2026-01-10 07:59:43,989 | INFO     | cat /etc/os-release:
[2026-01-10 03:00:28] NAME="CentOS Linux"
[2026-01-10 03:00:28] VERSION="7 (Core)"
[2026-01-10 03:00:28] ID="centos"
[2026-01-10 03:00:28] ID_LIKE="rhel fedora"
[2026-01-10 03:00:28] VERSION_ID="7"
[2026-01-10 03:00:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 03:00:28] ANSI_COLOR="0;31"
[2026-01-10 03:00:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 03:00:28] HOME_URL="https://www.centos.org/"
[2026-01-10 03:00:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 03:00:28] 
[2026-01-10 03:00:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 03:00:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 03:00:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 03:00:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 03:00:28] 
[2026-01-10 03:00:28] 2026-01-10 07:59:43,990 | INFO     | ***************************************
[2026-01-10 03:00:28] 2026-01-10 07:59:44,493 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 03:00:28] 2026-01-10 07:59:44,585 | INFO     | sufficient remaining disk space (74790731776 B)
[2026-01-10 03:00:28] 2026-01-10 07:59:44,586 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 03:00:28] 2026-01-10 07:59:44,586 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 03:00:28] 2026-01-10 07:59:44,586 | INFO     | update_server=False
[2026-01-10 03:00:28] 2026-01-10 07:59:44,586 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 03:00:28] 2026-01-10 07:59:44,586 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 03:00:28] 2026-01-10 07:59:44,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:00:28] 2026-01-10 07:59:44,587 | INFO     | aborting loop
[2026-01-10 03:00:28] 2026-01-10 07:59:44,615 | INFO     | all payload control threads have been joined
[2026-01-10 03:00:28] 2026-01-10 07:59:44,716 | INFO     | all data control threads have been joined
[2026-01-10 03:00:28] 2026-01-10 07:59:45,527 | INFO     | all job control threads have been joined
[2026-01-10 03:00:28] 2026-01-10 07:59:45,592 | INFO     | [job] retrieve thread has finished
[2026-01-10 03:00:28] 2026-01-10 07:59:45,593 | INFO     | [job] job monitor thread has finished
[2026-01-10 03:00:28] 2026-01-10 07:59:45,620 | INFO     | [payload] control thread has finished
[2026-01-10 03:00:28] 2026-01-10 07:59:45,722 | INFO     | [data] control thread has finished
[2026-01-10 03:00:28] 2026-01-10 07:59:45,968 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 03:00:28] 2026-01-10 07:59:45,972 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 03:00:28] 2026-01-10 07:59:45,972 | INFO     | [job] validate thread has finished
[2026-01-10 03:00:28] 2026-01-10 07:59:46,512 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 03:00:28] 2026-01-10 07:59:46,533 | INFO     | [job] control thread has finished
[2026-01-10 03:00:28] 2026-01-10 07:59:46,550 | INFO     | [payload] validate_post thread has finished
[2026-01-10 03:00:28] 2026-01-10 07:59:46,593 | INFO     | [data] copytool_out thread has finished
[2026-01-10 03:00:28] 2026-01-10 07:59:46,613 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 03:00:28] 2026-01-10 07:59:46,762 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 03:00:28] 2026-01-10 07:59:46,770 | INFO     | [data] copytool_in thread has finished
[2026-01-10 03:00:28] 2026-01-10 07:59:46,813 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 03:00:28] 2026-01-10 07:59:47,030 | INFO     | [payload] failed_post thread has finished
[2026-01-10 03:00:28] 2026-01-10 07:59:47,525 | INFO     | [job] queue monitor thread has finished
[2026-01-10 03:00:28] 2026-01-10 07:59:50,644 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 03:00:28] 2026-01-10 08:00:16,000 | INFO     | PID=469048 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 03:00:28] 2026-01-10 08:00:16,084 | INFO     | .. there are 10 such processes running
[2026-01-10 03:00:28] 2026-01-10 08:00:16,084 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 03:00:28] 2026-01-10 08:00:16,084 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 03:00:28] 2026-01-10 08:00:16,084 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 03:00:28] 2026-01-10 08:00:19,928 | INFO     | [monitor] cgroup control has ended
[2026-01-10 03:00:28] 2026-01-10 08:00:20,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139708926867264)>', '<ExcThread(monitor, started 139707769943808)>']
[2026-01-10 03:00:28] 2026-01-10 08:00:21,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 03:00:28] 2026-01-10 08:00:21,124 | INFO     | [monitor] control thread has ended
[2026-01-10 03:00:28] 2026-01-10 08:00:25,590 | INFO     | all workflow threads have been joined
[2026-01-10 03:00:28] 2026-01-10 08:00:25,590 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 03:00:28] 2026-01-10 08:00:25,590 | INFO     | traces error code: 0
[2026-01-10 03:00:28] 2026-01-10 08:00:25,591 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 03:00:28] 2026-01-10 08:00:26,824 [wrapper] ==== pilot stdout END ====
[2026-01-10 03:00:28] 2026-01-10 08:00:26,866 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 03:00:28] 2026-01-10 08:00:26,888 [wrapper] pilotpid: 469048
[2026-01-10 03:00:28] 2026-01-10 08:00:26,901 [wrapper] Pilot exit status: 0
[2026-01-10 03:00:28] 2026-01-10 08:00:27,158 [wrapper] pandaids: 6962314822
[2026-01-10 03:00:28] 2026-01-10 08:00:27,562 [wrapper] cleanup supervisor_pilot 1425584 469049
[2026-01-10 03:00:28] 2026-01-10 08:00:27,595 [wrapper] Test setup, not cleaning
[2026-01-10 03:00:28] 2026-01-10 08:00:27,612 [wrapper] apfmon messages muted
[2026-01-10 03:00:28] 2026-01-10 08:00:27,757 [wrapper] ==== wrapper stdout END ====
[2026-01-10 03:00:28] 2026-01-10 08:00:27,781 [wrapper] ==== wrapper stderr END ====
[2026-01-10 03:00:28]  *** Error codes and diagnostics ***
[2026-01-10 03:00:28]     "exeErrorCode": 0,
[2026-01-10 03:00:28]     "exeErrorDiag": "",
[2026-01-10 03:00:28]     "pilotErrorCode": 0,
[2026-01-10 03:00:28]     "pilotErrorDiag": "",
[2026-01-10 03:00:28]  *** Listing of results directory ***
[2026-01-10 03:00:28] total 435408
[2026-01-10 03:00:28] -rwx------. 1 boincer umatlas     36322 Jan  7 15:54 runpilot2-wrapper.sh
[2026-01-10 03:00:28] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 15:55 queuedata.json
[2026-01-10 03:00:28] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 15:55 pilot3.tar.gz
[2026-01-10 03:00:28] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 03:00:28] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:00 run_atlas
[2026-01-10 03:00:28] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:00 job.xml
[2026-01-10 03:00:28] -rw-r--r--. 2 boincer umatlas 223353965 Jan  9 19:00 EVNT.47898824._000288.pool.root.1
[2026-01-10 03:00:28] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:00 start_atlas.sh
[2026-01-10 03:00:28] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:00 shared
[2026-01-10 03:00:28] -rw-r--r--. 2 boincer umatlas    592391 Jan  9 19:00 input.tar.gz
[2026-01-10 03:00:28] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:00 boinc_lockfile
[2026-01-10 03:00:28] -rw-r--r--. 1 boincer umatlas      2516 Jan  9 19:00 pandaJob.out
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas        57 Jan  9 19:00 setup.sh.local
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas    989374 Jan  9 19:01 agis_schedconf.cvmfs.json
[2026-01-10 03:00:28] drwx------. 5 boincer umatlas      4096 Jan  9 19:01 pilot3
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas 209985075 Jan 10 02:54 HITS.47898826._011514.pool.root.1
[2026-01-10 03:00:28] -rw-r--r--. 1 boincer umatlas       531 Jan 10 02:54 boinc_task_state.xml
[2026-01-10 03:00:28] -rw-r--r--. 1 boincer umatlas      6843 Jan 10 02:56 init_data.xml
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas      1036 Jan 10 02:58 memory_monitor_summary.json
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas   1516240 Jan 10 02:58 agis_ddmendpoints.agis.ALL.json
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas    654544 Jan 10 02:58 log.47898826._011514.job.log.tgz.1
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas        95 Jan 10 02:59 pilot_heartbeat.json
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas      7815 Jan 10 02:59 heartbeat.json
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas      4823 Jan 10 03:00 pilotlog.txt
[2026-01-10 03:00:28] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 03:00 boinc_mmap_file
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas   3646050 Jan 10 03:00 log.47898826._011514.job.log.1
[2026-01-10 03:00:28] -rw-r--r--. 1 boincer umatlas        28 Jan 10 03:00 wrapper_checkpoint.txt
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas       357 Jan 10 03:00 output.list
[2026-01-10 03:00:28] -rw-r--r--. 1 boincer umatlas       620 Jan 10 03:00 runtime_log
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas   4321280 Jan 10 03:00 result.tar.gz
[2026-01-10 03:00:28] -rw-r--r--. 1 boincer umatlas      9348 Jan 10 03:00 runtime_log.err
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas       658 Jan 10 03:00 1LDNDmEjpx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHaiKDmHgdIMo.diag
[2026-01-10 03:00:28] -rw-r--r--. 1 boincer umatlas     21238 Jan 10 03:00 stderr.txt
[2026-01-10 03:00:28] HITS file was successfully produced:
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas 209985075 Jan 10 02:54 shared/HITS.pool.root.1
[2026-01-10 03:00:28]  *** Contents of shared directory: ***
[2026-01-10 03:00:28] total 428008
[2026-01-10 03:00:28] -rw-r--r--. 2 boincer umatlas 223353965 Jan  9 19:00 ATLAS.root_0
[2026-01-10 03:00:28] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:00 start_atlas.sh
[2026-01-10 03:00:28] -rw-r--r--. 2 boincer umatlas    592391 Jan  9 19:00 input.tar.gz
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas 209985075 Jan 10 02:54 HITS.pool.root.1
[2026-01-10 03:00:28] -rw-------. 1 boincer umatlas   4321280 Jan 10 03:00 result.tar.gz
03:00:30 (458874): run_atlas exited; CPU time 55734.533813
03:00:30 (458874): called boinc_finish(0)

</stderr_txt>
]]>

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