Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:46:22 (460547): wrapper (7.7.26015): starting
12:46:22 (460547): wrapper: running run_atlas (--nthreads 4)
[2026-01-11 12:46:22] Arguments: --nthreads 4
[2026-01-11 12:46:22] Threads: 4
[2026-01-11 12:46:22] Checking for CVMFS
[2026-01-11 12:46:22] No cvmfs_config command found, will try listing directly
[2026-01-11 12:46:22] CVMFS is ok
[2026-01-11 12:46:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 12:46:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 12:46:22] Further information can be found at the LHC@home message board.
[2026-01-11 12:46:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 12:46:22] Checking for apptainer binary...
[2026-01-11 12:46:22] which: no apptainer in ((null))
[2026-01-11 12:46:22] apptainer is not installed, using version from CVMFS
[2026-01-11 12:46:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 12:46:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2026-01-11 12:46:22] apptainer works
[2026-01-11 12:46:22] Set ATHENA_PROC_NUMBER=4
[2026-01-11 12:46:22] Set ATHENA_CORE_NUMBER=4
[2026-01-11 12:46:22] Starting ATLAS job with PandaID=6961933416
[2026-01-11 12:46:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 16:23:15]  *** The last 200 lines of the pilot log: ***
[2026-01-11 16:23:15] 2026-01-11 15:19:58,381 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2689.2980000000016
[2026-01-11 16:23:15] 2026-01-11 15:19:58,404 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6961933416/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 16:23:15] 2026-01-11 15:19:58,405 | INFO     | extracted standard info from prmon json
[2026-01-11 16:23:15] 2026-01-11 15:19:58,405 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 16:23:15] 2026-01-11 15:19:58,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 16:23:15] 2026-01-11 15:19:58,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 16:23:15] 2026-01-11 15:19:58,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 16:23:15] 2026-01-11 15:19:58,409 | INFO     | fitting pss+swap vs Time
[2026-01-11 16:23:15] 2026-01-11 15:19:58,410 | INFO     | sum of square deviations: 2871616632.5
[2026-01-11 16:23:15] 2026-01-11 15:19:58,411 | INFO     | sum of deviations: 297722150.9999981
[2026-01-11 16:23:15] 2026-01-11 15:19:58,411 | INFO     | mean x: 1768138405.5
[2026-01-11 16:23:15] 2026-01-11 15:19:58,411 | INFO     | mean y: 2330782.019047619
[2026-01-11 16:23:15] 2026-01-11 15:19:58,411 | INFO     | intersect: -180985459.91707608
[2026-01-11 16:23:15] 2026-01-11 15:19:58,412 | INFO     | chi2: 1.9353068482909332
[2026-01-11 16:23:15] 2026-01-11 15:19:58,412 | INFO     | sum of square deviations: 2671343110.0
[2026-01-11 16:23:15] 2026-01-11 15:19:58,413 | INFO     | sum of deviations: 12111373404.999994
[2026-01-11 16:23:15] 2026-01-11 15:19:58,413 | INFO     | mean x: 1768138253.0
[2026-01-11 16:23:15] 2026-01-11 15:19:58,413 | INFO     | mean y: 2339600.424390244
[2026-01-11 16:23:15] 2026-01-11 15:19:58,413 | INFO     | intersect: -8014070771.415622
[2026-01-11 16:23:15] 2026-01-11 15:19:58,414 | INFO     | chi2: 1.2792902340495247
[2026-01-11 16:23:15] 2026-01-11 15:19:58,414 | INFO     | current chi2=1.2792902340495247 (change=33.897292040315776 %)
[2026-01-11 16:23:15] 2026-01-11 15:19:58,414 | INFO     | sum of square deviations: 2480604650.0
[2026-01-11 16:23:15] 2026-01-11 15:19:58,415 | INFO     | sum of deviations: 11583458268.500004
[2026-01-11 16:23:15] 2026-01-11 15:19:58,415 | INFO     | mean x: 1768138100.5
[2026-01-11 16:23:15] 2026-01-11 15:19:58,416 | INFO     | mean y: 2339178.135
[2026-01-11 16:23:15] 2026-01-11 15:19:58,416 | INFO     | intersect: -8254177594.937491
[2026-01-11 16:23:15] 2026-01-11 15:19:58,416 | INFO     | chi2: 1.279765836282277
[2026-01-11 16:23:15] 2026-01-11 15:19:58,416 | INFO     | current chi2=1.279765836282277 (change=-0.03717703927488318 %)
[2026-01-11 16:23:15] 2026-01-11 15:19:58,416 | INFO     | right removable region: 199
[2026-01-11 16:23:15] 2026-01-11 15:19:58,416 | INFO     | sum of square deviations: 2671343110.0
[2026-01-11 16:23:15] 2026-01-11 15:19:58,418 | INFO     | sum of deviations: -22514765903.0
[2026-01-11 16:23:15] 2026-01-11 15:19:58,418 | INFO     | mean x: 1768138558.0
[2026-01-11 16:23:15] 2026-01-11 15:19:58,418 | INFO     | mean y: 2347895.3902439023
[2026-01-11 16:23:15] 2026-01-11 15:19:58,418 | INFO     | intersect: 14904673833.385529
[2026-01-11 16:23:15] 2026-01-11 15:19:58,418 | INFO     | chi2: 0.7389837147066259
[2026-01-11 16:23:15] 2026-01-11 15:19:58,418 | INFO     | current chi2=0.7389837147066259 (change=61.81568233692649 %)
[2026-01-11 16:23:15] 2026-01-11 15:19:58,419 | INFO     | sum of square deviations: 2480604650.0
[2026-01-11 16:23:15] 2026-01-11 15:19:58,420 | INFO     | sum of deviations: -19194820803.5
[2026-01-11 16:23:15] 2026-01-11 15:19:58,420 | INFO     | mean x: 1768138710.5
[2026-01-11 16:23:15] 2026-01-11 15:19:58,420 | INFO     | mean y: 2345225.685
[2026-01-11 16:23:15] 2026-01-11 15:19:58,420 | INFO     | intersect: 13684132730.106176
[2026-01-11 16:23:15] 2026-01-11 15:19:58,420 | INFO     | chi2: 0.7321694213250998
[2026-01-11 16:23:15] 2026-01-11 15:19:58,420 | INFO     | current chi2=0.7321694213250998 (change=0.9221168539866162 %)
[2026-01-11 16:23:15] 2026-01-11 15:19:58,421 | INFO     | left removable region: 20
[2026-01-11 16:23:15] 2026-01-11 15:19:58,421 | INFO     | sum of square deviations: 1778377530.0
[2026-01-11 16:23:15] 2026-01-11 15:19:58,422 | INFO     | sum of deviations: 1808479016.9999998
[2026-01-11 16:23:15] 2026-01-11 15:19:58,422 | INFO     | mean x: 1768138680.0
[2026-01-11 16:23:15] 2026-01-11 15:19:58,422 | INFO     | mean y: 2345758.0446927375
[2026-01-11 16:23:15] 2026-01-11 15:19:58,422 | INFO     | intersect: -1795721102.3289182
[2026-01-11 16:23:15] 2026-01-11 15:19:58,422 | INFO     | chi2: 0.01490553355890321
[2026-01-11 16:23:15] 2026-01-11 15:19:58,422 | INFO     | current memory leak: 1.02 B/s (using 179 data points, chi2=0.01)
[2026-01-11 16:23:15] 2026-01-11 15:19:58,423 | INFO     | could have reported an average CPU frequency of 2705 MHz (11 samples)
[2026-01-11 16:23:15] 2026-01-11 15:19:58,423 | INFO     | ..............................
[2026-01-11 16:23:15] 2026-01-11 15:19:58,423 | INFO     | . Timing measurements:
[2026-01-11 16:23:15] 2026-01-11 15:19:58,423 | INFO     | . get job = 0 s
[2026-01-11 16:23:15] 2026-01-11 15:19:58,423 | INFO     | . initial setup = 1 s
[2026-01-11 16:23:15] 2026-01-11 15:19:58,423 | INFO     | . payload setup = 8 s
[2026-01-11 16:23:15] 2026-01-11 15:19:58,423 | INFO     | . stage-in = 0 s
[2026-01-11 16:23:15] 2026-01-11 15:19:58,424 | INFO     | . payload execution = 12761 s
[2026-01-11 16:23:15] 2026-01-11 15:19:58,424 | INFO     | . stage-out = 1 s
[2026-01-11 16:23:15] 2026-01-11 15:19:58,424 | INFO     | . log creation = 0 s
[2026-01-11 16:23:15] 2026-01-11 15:19:58,424 | INFO     | ..............................
[2026-01-11 16:23:15] 2026-01-11 15:19:58,514 | INFO     | 
[2026-01-11 16:23:15] 2026-01-11 15:19:58,514 | INFO     | job summary report
[2026-01-11 16:23:15] 2026-01-11 15:19:58,514 | INFO     | --------------------------------------------------
[2026-01-11 16:23:15] 2026-01-11 15:19:58,514 | INFO     | PanDA job id: 6961933416
[2026-01-11 16:23:15] 2026-01-11 15:19:58,514 | INFO     | task id: 47898826
[2026-01-11 16:23:15] 2026-01-11 15:19:58,515 | INFO     | errors: (none)
[2026-01-11 16:23:15] 2026-01-11 15:19:58,515 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 16:23:15] 2026-01-11 15:19:58,515 | INFO     | pilot state: finished 
[2026-01-11 16:23:15] 2026-01-11 15:19:58,515 | INFO     | transexitcode: 0
[2026-01-11 16:23:15] 2026-01-11 15:19:58,515 | INFO     | exeerrorcode: 0
[2026-01-11 16:23:15] 2026-01-11 15:19:58,515 | INFO     | exeerrordiag: 
[2026-01-11 16:23:15] 2026-01-11 15:19:58,515 | INFO     | exitcode: 0
[2026-01-11 16:23:15] 2026-01-11 15:19:58,515 | INFO     | exitmsg: OK
[2026-01-11 16:23:15] 2026-01-11 15:19:58,515 | INFO     | cpuconsumptiontime: 48799 s
[2026-01-11 16:23:15] 2026-01-11 15:19:58,515 | INFO     | nevents: 400
[2026-01-11 16:23:15] 2026-01-11 15:19:58,515 | INFO     | neventsw: 0
[2026-01-11 16:23:15] 2026-01-11 15:19:58,515 | INFO     | pid: 472462
[2026-01-11 16:23:15] 2026-01-11 15:19:58,516 | INFO     | pgrp: 472462
[2026-01-11 16:23:15] 2026-01-11 15:19:58,516 | INFO     | corecount: 4
[2026-01-11 16:23:15] 2026-01-11 15:19:58,516 | INFO     | event service: False
[2026-01-11 16:23:15] 2026-01-11 15:19:58,516 | INFO     | sizes: {0: 2283136, 1: 2284004, 8: 2284266, 12: 2284294, 12774: 2314729, 12775: 2323751, 12777: 2324187, 12784: 2324381}
[2026-01-11 16:23:15] 2026-01-11 15:19:58,516 | INFO     | --------------------------------------------------
[2026-01-11 16:23:15] 2026-01-11 15:19:58,516 | INFO     | 
[2026-01-11 16:23:15] 2026-01-11 15:19:58,516 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2026-01-11 16:23:15] 2026-01-11 15:19:58,542 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,543 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,543 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,543 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,544 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 16:23:15] 2026-01-11 15:19:58,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,544 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 16:23:15] 2026-01-11 15:19:58,544 | INFO     | job 6961933416 has completed (purged errors)
[2026-01-11 16:23:15] 2026-01-11 15:19:58,545 | INFO     | overall cleanup function is called
[2026-01-11 16:23:15] 2026-01-11 15:19:59,553 | INFO     | --- collectZombieJob: --- 10, [472462]
[2026-01-11 16:23:15] 2026-01-11 15:19:59,553 | INFO     | zombie collector waiting for pid 472462
[2026-01-11 16:23:15] 2026-01-11 15:19:59,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 16:23:15] 2026-01-11 15:19:59,553 | INFO     | collected zombie processes
[2026-01-11 16:23:15] 2026-01-11 15:19:59,553 | INFO     | will attempt to kill all subprocesses of pid=472462
[2026-01-11 16:23:15] 2026-01-11 15:20:00,306 | INFO     | process IDs to be killed: [472462] (in reverse order)
[2026-01-11 16:23:15] 2026-01-11 15:20:00,538 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 16:23:15] 2026-01-11 15:20:00,539 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 16:23:15] 2026-01-11 15:20:00,568 | INFO     | did not find any defunct processes belonging to 472462
[2026-01-11 16:23:15] 2026-01-11 15:20:00,595 | INFO     | did not find any defunct processes belonging to 472462
[2026-01-11 16:23:15] 2026-01-11 15:20:00,595 | INFO     | ready for new job
[2026-01-11 16:23:15] 2026-01-11 15:20:00,595 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 16:23:15] 2026-01-11 15:20:00,597 | INFO     | ***************************************
[2026-01-11 16:23:15] 2026-01-11 15:20:00,598 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 16:23:15] 2026-01-11 15:20:00,598 | INFO     | ***************************************
[2026-01-11 16:23:15] 2026-01-11 15:20:00,598 | INFO     | 
[2026-01-11 16:23:15] 2026-01-11 15:20:00,606 | INFO     | architecture information:
[2026-01-11 16:23:15] 2026-01-11 15:20:00,606 | INFO     | executing command: cat /etc/os-release
[2026-01-11 16:23:15] 2026-01-11 15:20:00,625 | INFO     | cat /etc/os-release:
[2026-01-11 16:23:15] NAME="CentOS Linux"
[2026-01-11 16:23:15] VERSION="7 (Core)"
[2026-01-11 16:23:15] ID="centos"
[2026-01-11 16:23:15] ID_LIKE="rhel fedora"
[2026-01-11 16:23:15] VERSION_ID="7"
[2026-01-11 16:23:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 16:23:15] ANSI_COLOR="0;31"
[2026-01-11 16:23:15] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 16:23:15] HOME_URL="https://www.centos.org/"
[2026-01-11 16:23:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 16:23:15] 
[2026-01-11 16:23:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 16:23:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 16:23:15] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 16:23:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 16:23:15] 
[2026-01-11 16:23:15] 2026-01-11 15:20:00,625 | INFO     | ***************************************
[2026-01-11 16:23:15] 2026-01-11 15:20:01,127 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2026-01-11 16:23:15] 2026-01-11 15:20:01,148 | INFO     | sufficient remaining disk space (3357258285056 B)
[2026-01-11 16:23:15] 2026-01-11 15:20:01,148 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 16:23:15] 2026-01-11 15:20:01,148 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 16:23:15] 2026-01-11 15:20:01,149 | INFO     | update_server=False
[2026-01-11 16:23:15] 2026-01-11 15:20:01,149 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 16:23:15] 2026-01-11 15:20:01,149 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 16:23:15] 2026-01-11 15:20:01,374 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-11 16:23:15] 2026-01-11 15:20:01,374 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-11 16:23:15] 2026-01-11 15:20:01,374 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 16:23:15] 2026-01-11 15:20:01,374 | INFO     | will abort loop
[2026-01-11 16:23:15] 2026-01-11 15:20:01,476 | INFO     | all payload control threads have been joined
[2026-01-11 16:23:15] 2026-01-11 15:20:02,149 | INFO     | [job] retrieve thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:02,174 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:02,242 | INFO     | all data control threads have been joined
[2026-01-11 16:23:15] 2026-01-11 15:20:02,246 | INFO     | all job control threads have been joined
[2026-01-11 16:23:15] 2026-01-11 15:20:02,266 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 16:23:15] 2026-01-11 15:20:02,327 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:02,380 | INFO     | [job] job monitor thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:02,442 | INFO     | [payload] validate_post thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:02,482 | INFO     | [payload] control thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:02,644 | INFO     | [payload] failed_post thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:03,040 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:03,154 | INFO     | [data] copytool_out thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:03,248 | INFO     | [data] control thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:03,252 | INFO     | [job] control thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:03,532 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 16:23:15] 2026-01-11 15:20:03,607 | INFO     | [job] validate thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:03,631 | INFO     | [data] copytool_in thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:04,537 | INFO     | [job] queue monitor thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:06,272 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:11,694 | INFO     | job.realtimelogging is not enabled
[2026-01-11 16:23:15] 2026-01-11 15:20:12,702 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 16:23:15] 2026-01-11 15:20:31,231 | INFO     | PID=464859 has CPU usage=9.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-11 16:23:15] 2026-01-11 15:20:31,232 | INFO     | .. there are 7 such processes running
[2026-01-11 16:23:15] 2026-01-11 15:20:31,232 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 16:23:15] 2026-01-11 15:20:31,232 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 16:23:15] 2026-01-11 15:20:31,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 16:23:15] 2026-01-11 15:20:56,249 | INFO     | [monitor] cgroup control has ended
[2026-01-11 16:23:15] 2026-01-11 15:20:58,005 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23361147344704)>', '<ExcThread(monitor, started 23360907998976)>']
[2026-01-11 16:23:15] 2026-01-11 15:20:58,367 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 16:23:15] 2026-01-11 15:20:58,367 | INFO     | [monitor] control thread has ended
[2026-01-11 16:23:15] 2026-01-11 15:21:03,030 | INFO     | all workflow threads have been joined
[2026-01-11 16:23:15] 2026-01-11 15:21:03,030 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 16:23:15] 2026-01-11 15:21:03,030 | INFO     | traces error code: 0
[2026-01-11 16:23:15] 2026-01-11 15:21:03,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 16:23:15] 2026-01-11 15:21:03,178 [wrapper] ==== pilot stdout END ====
[2026-01-11 16:23:15] 2026-01-11 15:21:03,182 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 16:23:15] 2026-01-11 15:21:03,189 [wrapper] pilotpid: 464859
[2026-01-11 16:23:15] 2026-01-11 15:21:03,193 [wrapper] Pilot exit status: 0
[2026-01-11 16:23:15] 2026-01-11 15:21:03,209 [wrapper] pandaids: 6961933416
[2026-01-11 16:23:15] 2026-01-11 15:21:03,370 [wrapper] cleanup supervisor_pilot  802731 464860
[2026-01-11 16:23:15] 2026-01-11 15:21:03,374 [wrapper] Test setup, not cleaning
[2026-01-11 16:23:15] 2026-01-11 15:21:03,378 [wrapper] apfmon messages muted
[2026-01-11 16:23:15] 2026-01-11 15:21:03,383 [wrapper] ==== wrapper stdout END ====
[2026-01-11 16:23:15] 2026-01-11 15:21:03,386 [wrapper] ==== wrapper stderr END ====
[2026-01-11 16:23:15]  *** Error codes and diagnostics ***
[2026-01-11 16:23:15]     "exeErrorCode": 0,
[2026-01-11 16:23:15]     "exeErrorDiag": "",
[2026-01-11 16:23:15]     "pilotErrorCode": 0,
[2026-01-11 16:23:15]     "pilotErrorDiag": "",
[2026-01-11 16:23:15]  *** Listing of results directory ***
[2026-01-11 16:23:15] total 445960
[2026-01-11 16:23:15] -rw-r--r-- 1 boinc boinc    579449 Jan  7 14:00 pilot3.tar.gz
[2026-01-11 16:23:15] -rwx------ 1 boinc boinc     36322 Jan  7 14:04 runpilot2-wrapper.sh
[2026-01-11 16:23:15] -rw-r--r-- 1 boinc boinc      5112 Jan  7 14:05 queuedata.json
[2026-01-11 16:23:15] -rw-r--r-- 1 boinc boinc       100 Jan 11 12:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 16:23:15] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 12:46 run_atlas
[2026-01-11 16:23:15] -rw-r--r-- 1 boinc boinc       105 Jan 11 12:46 job.xml
[2026-01-11 16:23:15] -rw-r--r-- 1 boinc boinc      6692 Jan 11 12:46 init_data.xml
[2026-01-11 16:23:15] -rw-r--r-- 2 boinc boinc 225220700 Jan 11 12:46 EVNT.47898824._000265.pool.root.1
[2026-01-11 16:23:15] -rw-r--r-- 2 boinc boinc     15847 Jan 11 12:46 start_atlas.sh
[2026-01-11 16:23:15] drwxrwx--x 2 boinc boinc      4096 Jan 11 12:46 shared
[2026-01-11 16:23:15] -rw-r--r-- 2 boinc boinc    592404 Jan 11 12:46 input.tar.gz
[2026-01-11 16:23:15] -rw-r--r-- 1 boinc boinc         0 Jan 11 12:46 boinc_lockfile
[2026-01-11 16:23:15] -rw-r--r-- 1 boinc boinc      2516 Jan 11 12:46 pandaJob.out
[2026-01-11 16:23:15] -rw------- 1 boinc boinc    989548 Jan 11 12:46 agis_schedconf.cvmfs.json
[2026-01-11 16:23:15] drwx------ 5 boinc boinc      4096 Jan 11 12:46 pilot3
[2026-01-11 16:23:15] -rw------- 1 boinc boinc 223186108 Jan 11 16:19 HITS.47898826._007065.pool.root.1
[2026-01-11 16:23:15] -rw-r--r-- 1 boinc boinc       528 Jan 11 16:19 boinc_task_state.xml
[2026-01-11 16:23:15] -rw------- 1 boinc boinc      1027 Jan 11 16:19 memory_monitor_summary.json
[2026-01-11 16:23:15] -rw------- 1 boinc boinc   1516240 Jan 11 16:19 agis_ddmendpoints.agis.ALL.json
[2026-01-11 16:23:15] -rw------- 1 boinc boinc    387399 Jan 11 16:19 log.47898826._007065.job.log.tgz.1
[2026-01-11 16:23:15] -rw------- 1 boinc boinc        95 Jan 11 16:19 pilot_heartbeat.json
[2026-01-11 16:23:15] -rw------- 1 boinc boinc      7781 Jan 11 16:19 heartbeat.json
[2026-01-11 16:23:15] -rw------- 1 boinc boinc      5092 Jan 11 16:21 pilotlog.txt
[2026-01-11 16:23:15] -rw------- 1 boinc boinc   1783861 Jan 11 16:21 log.47898826._007065.job.log.1
[2026-01-11 16:23:15] -rw------- 1 boinc boinc       357 Jan 11 16:21 output.list
[2026-01-11 16:23:15] -rw-r--r-- 1 boinc boinc       620 Jan 11 16:21 runtime_log
[2026-01-11 16:23:15] -rw------- 1 boinc boinc   2191360 Jan 11 16:21 result.tar.gz
[2026-01-11 16:23:15] -rw------- 1 boinc boinc       667 Jan 11 16:21 wO7MDmOOix8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrzhKDmB5qCGm.diag
[2026-01-11 16:23:15] -rw-r--r-- 1 boinc boinc      9223 Jan 11 16:21 runtime_log.err
[2026-01-11 16:23:15] -rw-r--r-- 1 boinc boinc        26 Jan 11 16:22 wrapper_checkpoint.txt
[2026-01-11 16:23:15] -rw-r--r-- 1 boinc boinc      8192 Jan 11 16:23 boinc_mmap_file
[2026-01-11 16:23:15] -rw-r--r-- 1 boinc boinc     20865 Jan 11 16:23 stderr.txt
[2026-01-11 16:23:15] HITS file was successfully produced:
[2026-01-11 16:23:15] -rw------- 1 boinc boinc 223186108 Jan 11 16:19 shared/HITS.pool.root.1
[2026-01-11 16:23:15]  *** Contents of shared directory: ***
[2026-01-11 16:23:15] total 440644
[2026-01-11 16:23:15] -rw-r--r-- 2 boinc boinc 225220700 Jan 11 12:46 ATLAS.root_0
[2026-01-11 16:23:15] -rw-r--r-- 2 boinc boinc     15847 Jan 11 12:46 start_atlas.sh
[2026-01-11 16:23:15] -rw-r--r-- 2 boinc boinc    592404 Jan 11 12:46 input.tar.gz
[2026-01-11 16:23:15] -rw------- 1 boinc boinc 223186108 Jan 11 16:19 HITS.pool.root.1
[2026-01-11 16:23:15] -rw------- 1 boinc boinc   2191360 Jan 11 16:21 result.tar.gz
16:23:16 (460547): run_atlas exited; CPU time 49647.937672
16:23:16 (460547): called boinc_finish(0)

</stderr_txt>
]]>

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