Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:21:34 (3506312): wrapper (7.7.26015): starting
18:21:34 (3506312): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:21:34] Arguments: --nthreads 8
[2026-01-09 18:21:34] Threads: 8
[2026-01-09 18:21:34] Checking for CVMFS
[2026-01-09 18:21:35] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:21:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:21:35] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:21:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:21:35] 2.13.3.0 11772 94018 228784 154961 2 59 21934161 32935937 21607 16776704 0 503954444 99.507 664300909 36865 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 18:21:35] CVMFS is ok
[2026-01-09 18:21:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:21:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:21:35] Further information can be found at the LHC@home message board.
[2026-01-09 18:21:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:21:35] Checking for apptainer binary...
[2026-01-09 18:21:35] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:21:35] Running /usr/bin/apptainer --version
[2026-01-09 18:21:36] apptainer version 1.4.5-2.el9
[2026-01-09 18:21:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:21:36] c7-3-28.aglt2.org
[2026-01-09 18:21:36] apptainer works
[2026-01-09 18:21:36] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:21:36] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:21:36] Starting ATLAS job with PandaID=6962314734
[2026-01-09 18:21:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
21:40:06 (3506312): BOINC client no longer exists - exiting
21:40:06 (3506312): timer handler: client dead, exiting
21:40:44 (735577): wrapper (7.7.26015): starting
21:40:44 (735577): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 21:40:44] Arguments: --nthreads 8
[2026-01-09 21:40:44] Threads: 8
[2026-01-09 21:40:44] This job has been restarted, cleaning up previous attempt
[2026-01-09 21:40:44] Checking for CVMFS
[2026-01-09 21:40:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:40:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:40:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:40:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:40:45] 2.13.3.0 11772 94217 231020 154964 3 152 23691059 32935937 18060 16776704 0 504884444 99.508 664692656 36866 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 21:40:45] CVMFS is ok
[2026-01-09 21:40:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 21:40:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 21:40:45] Further information can be found at the LHC@home message board.
[2026-01-09 21:40:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:40:45] Checking for apptainer binary...
[2026-01-09 21:40:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:40:45] Running /usr/bin/apptainer --version
[2026-01-09 21:40:45] apptainer version 1.4.5-2.el9
[2026-01-09 21:40:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:40:45] c7-3-28.aglt2.org
[2026-01-09 21:40:45] apptainer works
[2026-01-09 21:40:45] Set ATHENA_PROC_NUMBER=8
[2026-01-09 21:40:45] Set ATHENA_CORE_NUMBER=8
[2026-01-09 21:40:45] Starting ATLAS job with PandaID=6962314734
[2026-01-09 21:40:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 04:32:53]  *** The last 200 lines of the pilot log: ***
[2026-01-10 04:32:53] 2026-01-10 09:32:20,066 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 04:32:53] 2026-01-10 09:32:20,066 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 04:32:53] 2026-01-10 09:32:20,066 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 04:32:53] 2026-01-10 09:32:20,069 | INFO     | fitting pss+swap vs Time
[2026-01-10 04:32:53] 2026-01-10 09:32:20,069 | INFO     | sum of square deviations: 20446463066.841816
[2026-01-10 04:32:53] 2026-01-10 09:32:20,071 | INFO     | sum of deviations: 120491143813.20792
[2026-01-10 04:32:53] 2026-01-10 09:32:20,071 | INFO     | mean x: 1768025179.519802
[2026-01-10 04:32:53] 2026-01-10 09:32:20,072 | INFO     | mean y: 2480331.599009901
[2026-01-10 04:32:53] 2026-01-10 09:32:20,072 | INFO     | intersect: -10416503894.399853
[2026-01-10 04:32:53] 2026-01-10 09:32:20,072 | INFO     | chi2: 1.507952080794649
[2026-01-10 04:32:53] 2026-01-10 09:32:20,072 | INFO     | sum of square deviations: 19696665401.839725
[2026-01-10 04:32:53] 2026-01-10 09:32:20,074 | INFO     | sum of deviations: 116517874347.47116
[2026-01-10 04:32:53] 2026-01-10 09:32:20,074 | INFO     | mean x: 1768025027.02005
[2026-01-10 04:32:53] 2026-01-10 09:32:20,074 | INFO     | mean y: 2479523.441102757
[2026-01-10 04:32:53] 2026-01-10 09:32:20,074 | INFO     | intersect: -10456474504.496279
[2026-01-10 04:32:53] 2026-01-10 09:32:20,074 | INFO     | chi2: 1.508111033821282
[2026-01-10 04:32:53] 2026-01-10 09:32:20,074 | INFO     | current chi2=1.508111033821282 (change=-0.010540986590852576 %)
[2026-01-10 04:32:53] 2026-01-10 09:32:20,074 | INFO     | right removable region: 398
[2026-01-10 04:32:53] 2026-01-10 09:32:20,075 | INFO     | sum of square deviations: 19696660521.839725
[2026-01-10 04:32:53] 2026-01-10 09:32:20,076 | INFO     | sum of deviations: 55669558084.711784
[2026-01-10 04:32:53] 2026-01-10 09:32:20,076 | INFO     | mean x: 1768025332.02005
[2026-01-10 04:32:53] 2026-01-10 09:32:20,077 | INFO     | mean y: 2493449.411027569
[2026-01-10 04:32:53] 2026-01-10 09:32:20,077 | INFO     | intersect: -4994556116.783091
[2026-01-10 04:32:53] 2026-01-10 09:32:20,077 | INFO     | chi2: 0.0792047968104218
[2026-01-10 04:32:53] 2026-01-10 09:32:20,077 | INFO     | current chi2=0.0792047968104218 (change=94.74752561310285 %)
[2026-01-10 04:32:53] 2026-01-10 09:32:20,077 | INFO     | sum of square deviations: 18965416464.33772
[2026-01-10 04:32:53] 2026-01-10 09:32:20,079 | INFO     | sum of deviations: 39482513646.12436
[2026-01-10 04:32:53] 2026-01-10 09:32:20,079 | INFO     | mean x: 1768025484.5203047
[2026-01-10 04:32:53] 2026-01-10 09:32:20,079 | INFO     | mean y: 2496825.2969543147
[2026-01-10 04:32:53] 2026-01-10 09:32:20,079 | INFO     | intersect: -3678207495.1449866
[2026-01-10 04:32:53] 2026-01-10 09:32:20,079 | INFO     | chi2: 0.03211559896111866
[2026-01-10 04:32:53] 2026-01-10 09:32:20,079 | INFO     | current chi2=0.03211559896111866 (change=59.45245710561197 %)
[2026-01-10 04:32:53] 2026-01-10 09:32:20,080 | INFO     | sum of square deviations: 18252498331.835445
[2026-01-10 04:32:53] 2026-01-10 09:32:20,081 | INFO     | sum of deviations: 33026243801.98717
[2026-01-10 04:32:53] 2026-01-10 09:32:20,081 | INFO     | mean x: 1768025637.0205655
[2026-01-10 04:32:53] 2026-01-10 09:32:20,084 | INFO     | mean y: 2498195.8766066837
[2026-01-10 04:32:53] 2026-01-10 09:32:20,084 | INFO     | intersect: -3196584180.400654
[2026-01-10 04:32:53] 2026-01-10 09:32:20,084 | INFO     | chi2: 0.012435072748248843
[2026-01-10 04:32:53] 2026-01-10 09:32:20,084 | INFO     | current chi2=0.012435072748248843 (change=61.28027142416496 %)
[2026-01-10 04:32:53] 2026-01-10 09:32:20,084 | INFO     | sum of square deviations: 17557673561.833305
[2026-01-10 04:32:53] 2026-01-10 09:32:20,086 | INFO     | sum of deviations: 34237119967.999985
[2026-01-10 04:32:53] 2026-01-10 09:32:20,086 | INFO     | mean x: 1768025789.5208333
[2026-01-10 04:32:53] 2026-01-10 09:32:20,086 | INFO     | mean y: 2497929.375
[2026-01-10 04:32:53] 2026-01-10 09:32:20,086 | INFO     | intersect: -3445117772.6236267
[2026-01-10 04:32:53] 2026-01-10 09:32:20,086 | INFO     | chi2: 0.010918993063779123
[2026-01-10 04:32:53] 2026-01-10 09:32:20,086 | INFO     | current chi2=0.010918993063779123 (change=12.191964736862685 %)
[2026-01-10 04:32:53] 2026-01-10 09:32:20,086 | INFO     | left removable region: 40
[2026-01-10 04:32:53] 2026-01-10 09:32:20,087 | INFO     | sum of square deviations: 14227258239.3212
[2026-01-10 04:32:53] 2026-01-10 09:32:20,088 | INFO     | sum of deviations: 32880940408.60611
[2026-01-10 04:32:53] 2026-01-10 09:32:20,088 | INFO     | mean x: 1768026216.5223463
[2026-01-10 04:32:53] 2026-01-10 09:32:20,088 | INFO     | mean y: 2496772.6117318436
[2026-01-10 04:32:53] 2026-01-10 09:32:20,088 | INFO     | intersect: -4083628866.526048
[2026-01-10 04:32:53] 2026-01-10 09:32:20,088 | INFO     | chi2: 0.0015587342251416358
[2026-01-10 04:32:53] 2026-01-10 09:32:20,088 | INFO     | current memory leak: 2.31 B/s (using 358 data points, chi2=0.00)
[2026-01-10 04:32:53] 2026-01-10 09:32:20,089 | INFO     | could have reported an average CPU frequency of 3184 MHz (17 samples)
[2026-01-10 04:32:53] 2026-01-10 09:32:20,089 | INFO     | ..............................
[2026-01-10 04:32:53] 2026-01-10 09:32:20,089 | INFO     | . Timing measurements:
[2026-01-10 04:32:53] 2026-01-10 09:32:20,089 | INFO     | . get job = 0 s
[2026-01-10 04:32:53] 2026-01-10 09:32:20,089 | INFO     | . initial setup = 1 s
[2026-01-10 04:32:53] 2026-01-10 09:32:20,089 | INFO     | . payload setup = 7 s
[2026-01-10 04:32:53] 2026-01-10 09:32:20,089 | INFO     | . stage-in = 0 s
[2026-01-10 04:32:53] 2026-01-10 09:32:20,089 | INFO     | . payload execution = 24646 s
[2026-01-10 04:32:53] 2026-01-10 09:32:20,089 | INFO     | . stage-out = 1 s
[2026-01-10 04:32:53] 2026-01-10 09:32:20,089 | INFO     | . log creation = 0 s
[2026-01-10 04:32:53] 2026-01-10 09:32:20,089 | INFO     | ..............................
[2026-01-10 04:32:53] 2026-01-10 09:32:20,133 | INFO     | 
[2026-01-10 04:32:53] 2026-01-10 09:32:20,133 | INFO     | job summary report
[2026-01-10 04:32:53] 2026-01-10 09:32:20,133 | INFO     | --------------------------------------------------
[2026-01-10 04:32:53] 2026-01-10 09:32:20,133 | INFO     | PanDA job id: 6962314734
[2026-01-10 04:32:53] 2026-01-10 09:32:20,134 | INFO     | task id: 47898826
[2026-01-10 04:32:53] 2026-01-10 09:32:20,134 | INFO     | errors: (none)
[2026-01-10 04:32:53] 2026-01-10 09:32:20,134 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 04:32:53] 2026-01-10 09:32:20,134 | INFO     | pilot state: finished 
[2026-01-10 04:32:53] 2026-01-10 09:32:20,134 | INFO     | transexitcode: 0
[2026-01-10 04:32:53] 2026-01-10 09:32:20,134 | INFO     | exeerrorcode: 0
[2026-01-10 04:32:53] 2026-01-10 09:32:20,134 | INFO     | exeerrordiag: 
[2026-01-10 04:32:53] 2026-01-10 09:32:20,134 | INFO     | exitcode: 0
[2026-01-10 04:32:53] 2026-01-10 09:32:20,134 | INFO     | exitmsg: OK
[2026-01-10 04:32:53] 2026-01-10 09:32:20,134 | INFO     | cpuconsumptiontime: 44585 s
[2026-01-10 04:32:53] 2026-01-10 09:32:20,134 | INFO     | nevents: 400
[2026-01-10 04:32:53] 2026-01-10 09:32:20,134 | INFO     | neventsw: 0
[2026-01-10 04:32:53] 2026-01-10 09:32:20,134 | INFO     | pid: 786359
[2026-01-10 04:32:53] 2026-01-10 09:32:20,134 | INFO     | pgrp: 786359
[2026-01-10 04:32:53] 2026-01-10 09:32:20,134 | INFO     | corecount: 8
[2026-01-10 04:32:53] 2026-01-10 09:32:20,135 | INFO     | event service: False
[2026-01-10 04:32:53] 2026-01-10 09:32:20,135 | INFO     | sizes: {0: 2283964, 6: 2284226, 11: 2284254, 24658: 2320180, 24661: 2329178, 24663: 2329234, 24667: 2329620}
[2026-01-10 04:32:53] 2026-01-10 09:32:20,135 | INFO     | --------------------------------------------------
[2026-01-10 04:32:53] 2026-01-10 09:32:20,135 | INFO     | 
[2026-01-10 04:32:53] 2026-01-10 09:32:20,135 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-10 04:32:53] 2026-01-10 09:32:20,152 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,152 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,152 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,152 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,152 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,152 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,152 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,153 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,153 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,153 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,153 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,153 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,153 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,153 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,153 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,153 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,153 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,153 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 04:32:53] 2026-01-10 09:32:20,153 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,154 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 04:32:53] 2026-01-10 09:32:20,154 | INFO     | job 6962314734 has completed (purged errors)
[2026-01-10 04:32:53] 2026-01-10 09:32:20,154 | INFO     | overall cleanup function is called
[2026-01-10 04:32:53] 2026-01-10 09:32:21,162 | INFO     | --- collectZombieJob: --- 10, [786359]
[2026-01-10 04:32:53] 2026-01-10 09:32:21,162 | INFO     | zombie collector waiting for pid 786359
[2026-01-10 04:32:53] 2026-01-10 09:32:21,162 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 04:32:53] 2026-01-10 09:32:21,162 | INFO     | collected zombie processes
[2026-01-10 04:32:53] 2026-01-10 09:32:21,162 | INFO     | will attempt to kill all subprocesses of pid=786359
[2026-01-10 04:32:53] 2026-01-10 09:32:21,646 | INFO     | process IDs to be killed: [786359] (in reverse order)
[2026-01-10 04:32:53] 2026-01-10 09:32:21,795 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 04:32:53] 2026-01-10 09:32:21,796 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 04:32:53] 2026-01-10 09:32:21,815 | INFO     | did not find any defunct processes belonging to 786359
[2026-01-10 04:32:53] 2026-01-10 09:32:21,832 | INFO     | did not find any defunct processes belonging to 786359
[2026-01-10 04:32:53] 2026-01-10 09:32:21,832 | INFO     | ready for new job
[2026-01-10 04:32:53] 2026-01-10 09:32:21,832 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 04:32:53] 2026-01-10 09:32:21,835 | INFO     | ***************************************
[2026-01-10 04:32:53] 2026-01-10 09:32:21,835 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 04:32:53] 2026-01-10 09:32:21,835 | INFO     | ***************************************
[2026-01-10 04:32:53] 2026-01-10 09:32:21,835 | INFO     | 
[2026-01-10 04:32:53] 2026-01-10 09:32:21,840 | INFO     | architecture information:
[2026-01-10 04:32:53] 2026-01-10 09:32:21,840 | INFO     | executing command: cat /etc/os-release
[2026-01-10 04:32:53] 2026-01-10 09:32:21,857 | INFO     | cat /etc/os-release:
[2026-01-10 04:32:53] NAME="CentOS Linux"
[2026-01-10 04:32:53] VERSION="7 (Core)"
[2026-01-10 04:32:53] ID="centos"
[2026-01-10 04:32:53] ID_LIKE="rhel fedora"
[2026-01-10 04:32:53] VERSION_ID="7"
[2026-01-10 04:32:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 04:32:53] ANSI_COLOR="0;31"
[2026-01-10 04:32:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 04:32:53] HOME_URL="https://www.centos.org/"
[2026-01-10 04:32:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 04:32:53] 
[2026-01-10 04:32:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 04:32:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 04:32:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 04:32:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 04:32:53] 
[2026-01-10 04:32:53] 2026-01-10 09:32:21,857 | INFO     | ***************************************
[2026-01-10 04:32:53] 2026-01-10 09:32:22,360 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-10 04:32:53] 2026-01-10 09:32:22,380 | INFO     | sufficient remaining disk space (75485937664 B)
[2026-01-10 04:32:53] 2026-01-10 09:32:22,380 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 04:32:53] 2026-01-10 09:32:22,380 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 04:32:53] 2026-01-10 09:32:22,380 | INFO     | update_server=False
[2026-01-10 04:32:53] 2026-01-10 09:32:22,380 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 04:32:53] 2026-01-10 09:32:22,380 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 04:32:53] 2026-01-10 09:32:22,381 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 04:32:53] 2026-01-10 09:32:22,381 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:32:53] 2026-01-10 09:32:22,381 | INFO     | aborting loop
[2026-01-10 04:32:53] 2026-01-10 09:32:22,806 | INFO     | all data control threads have been joined
[2026-01-10 04:32:53] 2026-01-10 09:32:23,225 | INFO     | all job control threads have been joined
[2026-01-10 04:32:53] 2026-01-10 09:32:23,385 | INFO     | [job] retrieve thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:23,386 | INFO     | [job] job monitor thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:23,488 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:23,608 | INFO     | all payload control threads have been joined
[2026-01-10 04:32:53] 2026-01-10 09:32:23,617 | INFO     | [job] validate thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:23,787 | INFO     | [payload] validate_post thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:23,811 | INFO     | [data] control thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:24,057 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:24,138 | INFO     | [payload] failed_post thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:24,230 | INFO     | [job] control thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:24,386 | INFO     | [data] copytool_out thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:24,614 | INFO     | [payload] control thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:24,650 | INFO     | [data] copytool_in thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:24,769 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:24,836 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:25,144 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:32:53] 2026-01-10 09:32:26,149 | INFO     | [job] queue monitor thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:26,382 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 04:32:53] 2026-01-10 09:32:38,448 | INFO     | [monitor] cgroup control has ended
[2026-01-10 04:32:53] 2026-01-10 09:32:39,609 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140116806272832)>', '<ExcThread(monitor, started 140116194490112)>']
[2026-01-10 04:32:53] 2026-01-10 09:32:44,633 | INFO     | all workflow threads have been joined
[2026-01-10 04:32:53] 2026-01-10 09:32:44,634 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 04:32:53] 2026-01-10 09:32:44,634 | INFO     | traces error code: 0
[2026-01-10 04:32:53] 2026-01-10 09:32:44,634 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 04:32:53] 2026-01-10 09:32:53,297 | INFO     | PID=754372 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 04:32:53] 2026-01-10 09:32:53,297 | INFO     | .. there are 25 such processes running
[2026-01-10 04:32:53] 2026-01-10 09:32:53,298 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 04:32:53] 2026-01-10 09:32:53,298 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 04:32:53] 2026-01-10 09:32:53,298 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 04:32:53] 2026-01-10 09:32:53,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 04:32:53] 2026-01-10 09:32:53,298 | INFO     | [monitor] control thread has ended
[2026-01-10 04:32:53] 2026-01-10 09:32:53,393 [wrapper] ==== pilot stdout END ====
[2026-01-10 04:32:53] 2026-01-10 09:32:53,397 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 04:32:53] 2026-01-10 09:32:53,399 [wrapper] pilotpid: 754372
[2026-01-10 04:32:53] 2026-01-10 09:32:53,402 [wrapper] Pilot exit status: 0
[2026-01-10 04:32:53] 2026-01-10 09:32:53,412 [wrapper] pandaids: 6962314734 6962314734
[2026-01-10 04:32:53] 2026-01-10 09:32:53,511 [wrapper] cleanup supervisor_pilot 3179579 754373
[2026-01-10 04:32:53] 2026-01-10 09:32:53,514 [wrapper] Test setup, not cleaning
[2026-01-10 04:32:53] 2026-01-10 09:32:53,517 [wrapper] apfmon messages muted
[2026-01-10 04:32:53] 2026-01-10 09:32:53,519 [wrapper] ==== wrapper stdout END ====
[2026-01-10 04:32:53] 2026-01-10 09:32:53,522 [wrapper] ==== wrapper stderr END ====
[2026-01-10 04:32:53]  *** Error codes and diagnostics ***
[2026-01-10 04:32:53]     "exeErrorCode": 0,
[2026-01-10 04:32:53]     "exeErrorDiag": "",
[2026-01-10 04:32:53]     "pilotErrorCode": 0,
[2026-01-10 04:32:53]     "pilotErrorDiag": "",
[2026-01-10 04:32:53]  *** Listing of results directory ***
[2026-01-10 04:32:53] total 664648
[2026-01-10 04:32:53] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-10 04:32:53] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 15:49 pilot3.tar.gz
[2026-01-10 04:32:53] -rwx------. 1 boincer umatlas     36322 Jan  7 15:54 runpilot2-wrapper.sh
[2026-01-10 04:32:53] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 15:55 queuedata.json
[2026-01-10 04:32:53] -rw-r--r--. 1 boincer umatlas       100 Jan  9 18:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 04:32:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 18:21 run_atlas
[2026-01-10 04:32:53] -rw-r--r--. 1 boincer umatlas       105 Jan  9 18:21 job.xml
[2026-01-10 04:32:53] -rw-r--r--. 3 boincer umatlas 224070376 Jan  9 18:21 EVNT.47898824._000285.pool.root.1
[2026-01-10 04:32:53] -rw-r--r--. 3 boincer umatlas 224070376 Jan  9 18:21 ATLAS.root_0
[2026-01-10 04:32:53] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:21 start_atlas.sh
[2026-01-10 04:32:53] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 18:21 shared
[2026-01-10 04:32:53] -rw-r--r--. 2 boincer umatlas    592389 Jan  9 18:21 input.tar.gz
[2026-01-10 04:32:53] -rw-r--r--. 1 boincer umatlas         0 Jan  9 18:21 boinc_lockfile
[2026-01-10 04:32:53] -rw-r--r--. 1 boincer umatlas      2516 Jan  9 21:40 pandaJob.out
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas        57 Jan  9 21:40 setup.sh.local
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas    989382 Jan  9 21:40 agis_schedconf.cvmfs.json
[2026-01-10 04:32:53] -rw-r--r--. 1 boincer umatlas      6945 Jan 10 04:27 init_data.xml
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas 220802897 Jan 10 04:31 HITS.47898826._011426.pool.root.1
[2026-01-10 04:32:53] -rw-r--r--. 1 boincer umatlas       531 Jan 10 04:31 boinc_task_state.xml
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas      1047 Jan 10 04:32 memory_monitor_summary.json
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas   1516240 Jan 10 04:32 agis_ddmendpoints.agis.ALL.json
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas    605140 Jan 10 04:32 log.47898826._011426.job.log.tgz.1
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas      7792 Jan 10 04:32 heartbeat.json
[2026-01-10 04:32:53] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 04:32 boinc_mmap_file
[2026-01-10 04:32:53] -rw-r--r--. 1 boincer umatlas        28 Jan 10 04:32 wrapper_checkpoint.txt
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas       822 Jan 10 04:32 pilotlog.txt
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas        95 Jan 10 04:32 pilot_heartbeat.json
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas   3262743 Jan 10 04:32 log.47898826._011426.job.log.1
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas       357 Jan 10 04:32 output.list
[2026-01-10 04:32:53] -rw-r--r--. 1 boincer umatlas       620 Jan 10 04:32 runtime_log
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas   3891200 Jan 10 04:32 result.tar.gz
[2026-01-10 04:32:53] -rw-r--r--. 1 boincer umatlas      9423 Jan 10 04:32 runtime_log.err
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas       784 Jan 10 04:32 GAsMDmDjpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm7SdKDmqoW0dn.diag
[2026-01-10 04:32:53] -rw-r--r--. 1 boincer umatlas     23270 Jan 10 04:32 stderr.txt
[2026-01-10 04:32:53] HITS file was successfully produced:
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas 220802897 Jan 10 04:31 shared/HITS.pool.root.1
[2026-01-10 04:32:53]  *** Contents of shared directory: ***
[2026-01-10 04:32:53] total 438852
[2026-01-10 04:32:53] -rw-r--r--. 3 boincer umatlas 224070376 Jan  9 18:21 ATLAS.root_0
[2026-01-10 04:32:53] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:21 start_atlas.sh
[2026-01-10 04:32:53] -rw-r--r--. 2 boincer umatlas    592389 Jan  9 18:21 input.tar.gz
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas 220802897 Jan 10 04:31 HITS.pool.root.1
[2026-01-10 04:32:53] -rw-------. 1 boincer umatlas   3891200 Jan 10 04:32 result.tar.gz
04:32:54 (735577): run_atlas exited; CPU time 45611.823174
04:32:54 (735577): called boinc_finish(0)

</stderr_txt>
]]>

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