Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
17:17:51 (304633): wrapper (7.7.26015): starting
17:17:51 (304633): wrapper: running run_atlas (--nthreads 12)
[2026-01-09 17:17:51] Arguments: --nthreads 12
[2026-01-09 17:17:51] Threads: 12
[2026-01-09 17:17:51] Checking for CVMFS
[2026-01-09 17:17:53] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:17:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:17:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:17:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:17:55] 2.13.2.0 304831 0 29924 154961 3 1 15784520 16777217 0 130560 0 0 0.000 1335 1236 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2026-01-09 17:17:55] CVMFS is ok
[2026-01-09 17:17:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:17:55] Checking for apptainer binary...
[2026-01-09 17:17:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:17:55] Running /usr/bin/apptainer --version
[2026-01-09 17:17:55] apptainer version 1.3.0-bp160.1.36
[2026-01-09 17:17:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:17:55] boinc-runner
[2026-01-09 17:17:55] apptainer works
[2026-01-09 17:17:55] Set ATHENA_PROC_NUMBER=12
[2026-01-09 17:17:55] Set ATHENA_CORE_NUMBER=12
[2026-01-09 17:17:55] Starting ATLAS job with PandaID=6963189221
[2026-01-09 17:17:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 18:03:37]  *** The last 200 lines of the pilot log: ***
[2026-01-09 18:03:37]  mtime=0
[2026-01-09 18:03:37]  protocol_id=None
[2026-01-09 18:03:37]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 18:03:37]  replicas=None
[2026-01-09 18:03:37]  scope=mc23_13p6TeV
[2026-01-09 18:03:37]  status=None
[2026-01-09 18:03:37]  status_code=0
[2026-01-09 18:03:37]  storage_token=
[2026-01-09 18:03:37]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6963189221/log.47898826._038103.job.log.tgz.1
[2026-01-09 18:03:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/74/log.47898826._038103.job.log.tgz.1
[2026-01-09 18:03:37]  workdir=None
[2026-01-09 18:03:37] ]
[2026-01-09 18:03:37] 2026-01-10 00:03:00,678 | INFO     | transferring file log.47898826._038103.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6963189221/log.47898826._038103.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-09 18:03:37] 2026-01-10 00:03:00,678 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6963189221/log.47898826._038103.job.log.tgz.1 /var/lib/boinc/slots/2/log.47898826._038103.job
[2026-01-09 18:03:37] 2026-01-10 00:03:00,688 | INFO     | adding to output.list: log.47898826._038103.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d3/74/log.47898826._038103.job.log.tg
[2026-01-09 18:03:37] 2026-01-10 00:03:00,688 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 18:03:37] 2026-01-10 00:03:00,688 | INFO     | summary of transferred files:
[2026-01-09 18:03:37] 2026-01-10 00:03:00,688 | INFO     |  -- lfn=log.47898826._038103.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 18:03:37] 2026-01-10 00:03:00,688 | INFO     | stage-out finished correctly
[2026-01-09 18:03:37] 2026-01-10 00:03:00,731 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 18:03:37] 2026-01-10 00:03:00,778 | INFO     | job 6963189221 has state=finished
[2026-01-09 18:03:37] 2026-01-10 00:03:00,778 | INFO     | preparing for final server update for job 6963189221 in state='finished'
[2026-01-09 18:03:37] 2026-01-10 00:03:01,047 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-09 18:03:37] 2026-01-10 00:03:01,047 | INFO     | this job has now completed (state=finished)
[2026-01-09 18:03:37] 2026-01-10 00:03:01,047 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 18:03:37] 2026-01-10 00:03:01,047 | INFO     | log transfer has been attempted: DONE
[2026-01-09 18:03:37] 2026-01-10 00:03:01,047 | INFO     | job 6963189221 has finished - writing final server update
[2026-01-09 18:03:37] 2026-01-10 00:03:01,047 | INFO     | total number of processed events: 400 (read)
[2026-01-09 18:03:37] 2026-01-10 00:03:01,048 | INFO     | executing command: lscpu
[2026-01-09 18:03:37] 2026-01-10 00:03:01,066 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 18:03:37] 2026-01-10 00:03:02,104 | WARNING  | process 315689 can no longer be monitored (due to stat problems) - aborting
[2026-01-09 18:03:37] 2026-01-10 00:03:02,104 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6963189221/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:03:37] 2026-01-10 00:03:02,158 | INFO     | time since job start (2688s) is within the limit (349056.0s)
[2026-01-09 18:03:37] 2026-01-10 00:03:02,171 | INFO     | number of running child processes to parent process 315689: 1
[2026-01-09 18:03:37] 2026-01-10 00:03:02,171 | INFO     | maximum number of monitored processes: 6
[2026-01-09 18:03:37] 2026-01-10 00:03:04,163 | INFO     | time since job start (2690s) is within the limit (349056.0s)
[2026-01-09 18:03:37] 2026-01-10 00:03:04,515 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 18:03:37] 2026-01-10 00:03:04,518 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3895.4190624999997
[2026-01-09 18:03:37] 2026-01-10 00:03:04,521 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6963189221/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 18:03:37] 2026-01-10 00:03:04,522 | INFO     | extracted standard info from prmon json
[2026-01-09 18:03:37] 2026-01-10 00:03:04,522 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 18:03:37] 2026-01-10 00:03:04,522 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 18:03:37] 2026-01-10 00:03:04,522 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 18:03:37] 2026-01-10 00:03:04,522 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 18:03:37] 2026-01-10 00:03:04,523 | INFO     | fitting pss+swap vs Time
[2026-01-09 18:03:37] 2026-01-10 00:03:04,523 | INFO     | sum of square deviations: 15695178.0
[2026-01-09 18:03:37] 2026-01-10 00:03:04,523 | INFO     | sum of deviations: -661808947.0
[2026-01-09 18:03:37] 2026-01-10 00:03:04,523 | INFO     | mean x: 1768002116.0
[2026-01-09 18:03:37] 2026-01-10 00:03:04,523 | INFO     | mean y: 2850675.918918919
[2026-01-09 18:03:37] 2026-01-10 00:03:04,523 | INFO     | intersect: 74553111825.15416
[2026-01-09 18:03:37] 2026-01-10 00:03:04,523 | INFO     | chi2: 0.014341281948057871
[2026-01-09 18:03:37] 2026-01-10 00:03:04,523 | INFO     | current memory leak: -42.17 B/s (using 37 data points, chi2=0.01)
[2026-01-09 18:03:37] 2026-01-10 00:03:04,523 | INFO     | could have reported an average CPU frequency of 3974 MHz (5 samples)
[2026-01-09 18:03:37] 2026-01-10 00:03:04,523 | INFO     | ..............................
[2026-01-09 18:03:37] 2026-01-10 00:03:04,523 | INFO     | . Timing measurements:
[2026-01-09 18:03:37] 2026-01-10 00:03:04,523 | INFO     | . get job = 0 s
[2026-01-09 18:03:37] 2026-01-10 00:03:04,524 | INFO     | . initial setup = 7 s
[2026-01-09 18:03:37] 2026-01-10 00:03:04,524 | INFO     | . payload setup = 3 s
[2026-01-09 18:03:37] 2026-01-10 00:03:04,524 | INFO     | . stage-in = 0 s
[2026-01-09 18:03:37] 2026-01-10 00:03:04,524 | INFO     | . payload execution = 2666 s
[2026-01-09 18:03:37] 2026-01-10 00:03:04,524 | INFO     | . stage-out = 0 s
[2026-01-09 18:03:37] 2026-01-10 00:03:04,524 | INFO     | . log creation = 0 s
[2026-01-09 18:03:37] 2026-01-10 00:03:04,524 | INFO     | ..............................
[2026-01-09 18:03:37] 2026-01-10 00:03:04,850 | INFO     | 
[2026-01-09 18:03:37] 2026-01-10 00:03:04,850 | INFO     | job summary report
[2026-01-09 18:03:37] 2026-01-10 00:03:04,850 | INFO     | --------------------------------------------------
[2026-01-09 18:03:37] 2026-01-10 00:03:04,850 | INFO     | PanDA job id: 6963189221
[2026-01-09 18:03:37] 2026-01-10 00:03:04,850 | INFO     | task id: 47898826
[2026-01-09 18:03:37] 2026-01-10 00:03:04,850 | INFO     | errors: (none)
[2026-01-09 18:03:37] 2026-01-10 00:03:04,850 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 18:03:37] 2026-01-10 00:03:04,850 | INFO     | pilot state: finished 
[2026-01-09 18:03:37] 2026-01-10 00:03:04,850 | INFO     | transexitcode: 0
[2026-01-09 18:03:37] 2026-01-10 00:03:04,850 | INFO     | exeerrorcode: 0
[2026-01-09 18:03:37] 2026-01-10 00:03:04,850 | INFO     | exeerrordiag: 
[2026-01-09 18:03:37] 2026-01-10 00:03:04,850 | INFO     | exitcode: 0
[2026-01-09 18:03:37] 2026-01-10 00:03:04,851 | INFO     | exitmsg: OK
[2026-01-09 18:03:37] 2026-01-10 00:03:04,851 | INFO     | cpuconsumptiontime: 28845 s
[2026-01-09 18:03:37] 2026-01-10 00:03:04,851 | INFO     | nevents: 400
[2026-01-09 18:03:37] 2026-01-10 00:03:04,851 | INFO     | neventsw: 0
[2026-01-09 18:03:37] 2026-01-10 00:03:04,851 | INFO     | pid: 315689
[2026-01-09 18:03:37] 2026-01-10 00:03:04,851 | INFO     | pgrp: 315689
[2026-01-09 18:03:37] 2026-01-10 00:03:04,851 | INFO     | corecount: 12
[2026-01-09 18:03:37] 2026-01-10 00:03:04,851 | INFO     | event service: False
[2026-01-09 18:03:37] 2026-01-10 00:03:04,851 | INFO     | sizes: {0: 2283143, 1: 2283999, 3: 2284261, 11: 2284289, 2673: 2309634, 2674: 2318816, 2677: 2318986}
[2026-01-09 18:03:37] 2026-01-10 00:03:04,851 | INFO     | --------------------------------------------------
[2026-01-09 18:03:37] 2026-01-10 00:03:04,851 | INFO     | 
[2026-01-09 18:03:37] 2026-01-10 00:03:04,851 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,865 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 18:03:37] 2026-01-10 00:03:04,866 | INFO     | job 6963189221 has completed (purged errors)
[2026-01-09 18:03:37] 2026-01-10 00:03:04,866 | INFO     | overall cleanup function is called
[2026-01-09 18:03:37] 2026-01-10 00:03:05,872 | INFO     | --- collectZombieJob: --- 10, [315689]
[2026-01-09 18:03:37] 2026-01-10 00:03:05,872 | INFO     | zombie collector waiting for pid 315689
[2026-01-09 18:03:37] 2026-01-10 00:03:05,872 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 18:03:37] 2026-01-10 00:03:05,872 | INFO     | collected zombie processes
[2026-01-09 18:03:37] 2026-01-10 00:03:05,872 | INFO     | will attempt to kill all subprocesses of pid=315689
[2026-01-09 18:03:37] 2026-01-10 00:03:05,933 | INFO     | process IDs to be killed: [315689] (in reverse order)
[2026-01-09 18:03:37] 2026-01-10 00:03:05,968 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 18:03:37] 2026-01-10 00:03:05,969 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 18:03:37] 2026-01-10 00:03:05,971 | INFO     | did not find any defunct processes belonging to 315689
[2026-01-09 18:03:37] 2026-01-10 00:03:05,974 | INFO     | did not find any defunct processes belonging to 315689
[2026-01-09 18:03:37] 2026-01-10 00:03:05,974 | INFO     | ready for new job
[2026-01-09 18:03:37] 2026-01-10 00:03:05,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 18:03:37] 2026-01-10 00:03:05,976 | INFO     | ***************************************
[2026-01-09 18:03:37] 2026-01-10 00:03:05,976 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 18:03:37] 2026-01-10 00:03:05,976 | INFO     | ***************************************
[2026-01-09 18:03:37] 2026-01-10 00:03:05,976 | INFO     | 
[2026-01-09 18:03:37] 2026-01-10 00:03:05,977 | INFO     | architecture information:
[2026-01-09 18:03:37] 2026-01-10 00:03:05,977 | INFO     | executing command: cat /etc/os-release
[2026-01-09 18:03:37] 2026-01-10 00:03:05,984 | INFO     | cat /etc/os-release:
[2026-01-09 18:03:37] NAME="CentOS Linux"
[2026-01-09 18:03:37] VERSION="7 (Core)"
[2026-01-09 18:03:37] ID="centos"
[2026-01-09 18:03:37] ID_LIKE="rhel fedora"
[2026-01-09 18:03:37] VERSION_ID="7"
[2026-01-09 18:03:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 18:03:37] ANSI_COLOR="0;31"
[2026-01-09 18:03:37] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 18:03:37] HOME_URL="https://www.centos.org/"
[2026-01-09 18:03:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 18:03:37] 
[2026-01-09 18:03:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 18:03:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 18:03:37] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 18:03:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 18:03:37] 
[2026-01-09 18:03:37] 2026-01-10 00:03:05,985 | INFO     | ***************************************
[2026-01-09 18:03:37] 2026-01-10 00:03:06,487 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-09 18:03:37] 2026-01-10 00:03:06,497 | INFO     | sufficient remaining disk space (3859698155520 B)
[2026-01-09 18:03:37] 2026-01-10 00:03:06,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 18:03:37] 2026-01-10 00:03:06,497 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 18:03:37] 2026-01-10 00:03:06,497 | INFO     | update_server=False
[2026-01-09 18:03:37] 2026-01-10 00:03:06,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 18:03:37] 2026-01-10 00:03:06,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 18:03:37] 2026-01-10 00:03:06,497 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:03:37] 2026-01-10 00:03:06,498 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 18:03:37] 2026-01-10 00:03:06,498 | INFO     | aborting loop
[2026-01-09 18:03:37] 2026-01-10 00:03:06,783 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 18:03:37] 2026-01-10 00:03:06,828 [wrapper] supervise_pilot (15 min periods counter: 4)
[2026-01-09 18:03:37] 2026-01-10 00:03:07,502 | INFO     | [job] retrieve thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:07,503 | INFO     | [job] queue monitor thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:07,503 | INFO     | [job] job monitor thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:07,517 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:07,567 | INFO     | all job control threads have been joined
[2026-01-09 18:03:37] 2026-01-10 00:03:07,581 | INFO     | all data control threads have been joined
[2026-01-09 18:03:37] 2026-01-10 00:03:07,601 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:07,822 | INFO     | all payload control threads have been joined
[2026-01-09 18:03:37] 2026-01-10 00:03:07,995 | INFO     | [data] copytool_in thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:08,113 | INFO     | [payload] failed_post thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:08,299 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:08,500 | INFO     | [data] copytool_out thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:08,573 | INFO     | [job] control thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:08,586 | INFO     | [data] control thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:08,826 | INFO     | [payload] control thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:08,852 | INFO     | [payload] validate_post thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:08,938 | INFO     | [job] validate thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:10,788 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:16,925 | INFO     | job.realtimelogging is not enabled
[2026-01-09 18:03:37] 2026-01-10 00:03:17,930 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 18:03:37] 2026-01-10 00:03:18,463 | INFO     | [monitor] cgroup control has ended
[2026-01-09 18:03:37] 2026-01-10 00:03:19,707 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140147852887872)>', '<ExcThread(monitor, started 140147500758784)>']
[2026-01-09 18:03:37] 2026-01-10 00:03:24,732 | INFO     | all workflow threads have been joined
[2026-01-09 18:03:37] 2026-01-10 00:03:24,733 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 18:03:37] 2026-01-10 00:03:24,733 | INFO     | traces error code: 0
[2026-01-09 18:03:37] 2026-01-10 00:03:24,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 18:03:37] 2026-01-10 00:03:37,282 | INFO     | PID=309031 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 18:03:37] 2026-01-10 00:03:37,282 | INFO     | .. there are 2 such processes running
[2026-01-09 18:03:37] 2026-01-10 00:03:37,282 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 18:03:37] 2026-01-10 00:03:37,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 18:03:37] 2026-01-10 00:03:37,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 18:03:37] 2026-01-10 00:03:37,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 18:03:37] 2026-01-10 00:03:37,283 | INFO     | [monitor] control thread has ended
[2026-01-09 18:03:37] 2026-01-10 00:03:37,336 [wrapper] ==== pilot stdout END ====
[2026-01-09 18:03:37] 2026-01-10 00:03:37,338 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 18:03:37] 2026-01-10 00:03:37,339 [wrapper] pilotpid: 309031
[2026-01-09 18:03:37] 2026-01-10 00:03:37,340 [wrapper] Pilot exit status: 0
[2026-01-09 18:03:37] 2026-01-10 00:03:37,346 [wrapper] pandaids: 6963189221
[2026-01-09 18:03:37] 2026-01-10 00:03:37,366 [wrapper] cleanup supervisor_pilot  348609 309032
[2026-01-09 18:03:37] 2026-01-10 00:03:37,368 [wrapper] Test setup, not cleaning
[2026-01-09 18:03:37] 2026-01-10 00:03:37,369 [wrapper] apfmon messages muted
[2026-01-09 18:03:37] 2026-01-10 00:03:37,370 [wrapper] ==== wrapper stdout END ====
[2026-01-09 18:03:37] 2026-01-10 00:03:37,372 [wrapper] ==== wrapper stderr END ====
[2026-01-09 18:03:37]  *** Error codes and diagnostics ***
[2026-01-09 18:03:37]     "exeErrorCode": 0,
[2026-01-09 18:03:37]     "exeErrorDiag": "",
[2026-01-09 18:03:37]     "pilotErrorCode": 0,
[2026-01-09 18:03:37]     "pilotErrorDiag": "",
[2026-01-09 18:03:37]  *** Listing of results directory ***
[2026-01-09 18:03:37] total 439988
[2026-01-09 18:03:37] -rw-r--r--. 1 boinc boinc      5112 Jan  8 22:21 queuedata.json
[2026-01-09 18:03:37] -rw-r--r--. 1 boinc boinc    579449 Jan  8 22:21 pilot3.tar.gz
[2026-01-09 18:03:37] -rwx------. 1 boinc boinc     36322 Jan  8 22:22 runpilot2-wrapper.sh
[2026-01-09 18:03:37] -rw-r--r--. 1 boinc boinc       100 Jan  9 17:17 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 18:03:37] -rwxr-xr-x. 1 boinc boinc      7986 Jan  9 17:17 run_atlas
[2026-01-09 18:03:37] -rw-r--r--. 1 boinc boinc       105 Jan  9 17:17 job.xml
[2026-01-09 18:03:37] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:17 start_atlas.sh
[2026-01-09 18:03:37] drwxrwx--x. 1 boinc boinc        76 Jan  9 17:17 shared
[2026-01-09 18:03:37] -rw-r--r--. 2 boinc boinc    592397 Jan  9 17:17 input.tar.gz
[2026-01-09 18:03:37] -rw-r--r--. 1 boinc boinc     10048 Jan  9 17:17 init_data.xml
[2026-01-09 18:03:37] -rw-r--r--. 2 boinc boinc 225544212 Jan  9 17:17 EVNT.47898824._001463.pool.root.1
[2026-01-09 18:03:37] -rw-r--r--. 1 boinc boinc         0 Jan  9 17:17 boinc_setup_complete
[2026-01-09 18:03:37] -rw-r--r--. 1 boinc boinc         0 Jan  9 17:17 boinc_lockfile
[2026-01-09 18:03:37] -rw-r--r--. 1 boinc boinc      2520 Jan  9 17:17 pandaJob.out
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc        63 Jan  9 17:17 setup.sh.local
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc    989374 Jan  9 17:18 agis_schedconf.cvmfs.json
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc   1516240 Jan  9 17:18 agis_ddmendpoints.agis.ALL.json
[2026-01-09 18:03:37] drwx------. 1 boinc boinc       414 Jan  9 17:18 pilot3
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc 219565863 Jan  9 18:02 HITS.47898826._038103.pool.root.1
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc      1019 Jan  9 18:02 memory_monitor_summary.json
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc    347396 Jan  9 18:03 log.47898826._038103.job.log.tgz.1
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc      7778 Jan  9 18:03 heartbeat.json
[2026-01-09 18:03:37] -rw-r--r--. 1 boinc boinc      8192 Jan  9 18:03 boinc_mmap_file
[2026-01-09 18:03:37] -rw-r--r--. 1 boinc boinc        27 Jan  9 18:03 wrapper_checkpoint.txt
[2026-01-09 18:03:37] -rw-r--r--. 1 boinc boinc       529 Jan  9 18:03 boinc_task_state.xml
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc       821 Jan  9 18:03 pilotlog.txt
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc        95 Jan  9 18:03 pilot_heartbeat.json
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc    424245 Jan  9 18:03 log.47898826._038103.job.log.1
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc       357 Jan  9 18:03 output.list
[2026-01-09 18:03:37] -rw-r--r--. 1 boinc boinc       620 Jan  9 18:03 runtime_log
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc    788480 Jan  9 18:03 result.tar.gz
[2026-01-09 18:03:37] -rw-r--r--. 1 boinc boinc      9396 Jan  9 18:03 runtime_log.err
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc       652 Jan  9 18:03 hilLDmECJy8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmn8lKDmPlWrZm.diag
[2026-01-09 18:03:37] -rw-r--r--. 1 boinc boinc     21372 Jan  9 18:03 stderr.txt
[2026-01-09 18:03:37] HITS file was successfully produced:
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc 219565863 Jan  9 18:02 shared/HITS.pool.root.1
[2026-01-09 18:03:37]  *** Contents of shared directory: ***
[2026-01-09 18:03:37] total 436048
[2026-01-09 18:03:37] -rw-r--r--. 2 boinc boinc     15847 Jan  9 17:17 start_atlas.sh
[2026-01-09 18:03:37] -rw-r--r--. 2 boinc boinc    592397 Jan  9 17:17 input.tar.gz
[2026-01-09 18:03:37] -rw-r--r--. 2 boinc boinc 225544212 Jan  9 17:17 ATLAS.root_0
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc 219565863 Jan  9 18:02 HITS.pool.root.1
[2026-01-09 18:03:37] -rw-------. 1 boinc boinc    788480 Jan  9 18:03 result.tar.gz
18:03:38 (304633): run_atlas exited; CPU time 28863.389675
18:03:38 (304633): called boinc_finish(0)

</stderr_txt>
]]>

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