Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-09 17:53:00 (361808): vboxwrapper version 26210
2026-01-09 17:53:00 (361808): BOINC client version: 8.2.8
2026-01-09 17:53:01 (361808): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2026-01-09 17:53:01 (361808): Successfully copied 'init_data.xml' to the shared directory.
2026-01-09 17:53:01 (361808): Create VM. (boinc_eee420736af48864, slot#8)
2026-01-09 17:53:01 (361808): Setting Memory Size for VM. (4800MB)
2026-01-09 17:53:01 (361808): Setting CPU Count for VM. (8)
2026-01-09 17:53:01 (361808): Setting Chipset Options for VM.
2026-01-09 17:53:01 (361808): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-09 17:53:01 (361808): Setting Boot Options for VM.
2026-01-09 17:53:02 (361808): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-09 17:53:02 (361808): Enabling VM Network Access.
2026-01-09 17:53:02 (361808): Disabling USB Support for VM.
2026-01-09 17:53:02 (361808): Disabling COM Port Support for VM.
2026-01-09 17:53:02 (361808): Disabling LPT Port Support for VM.
2026-01-09 17:53:02 (361808): Disabling Audio Support for VM.
2026-01-09 17:53:02 (361808): Disabling Clipboard Support for VM.
2026-01-09 17:53:02 (361808): Disabling Drag and Drop Support for VM.
2026-01-09 17:53:02 (361808): Adding storage controller(s) to VM.
2026-01-09 17:53:02 (361808): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-09 17:53:03 (361808): Adding VirtualBox Guest Additions to VM.
2026-01-09 17:53:03 (361808): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-09 17:53:03 (361808): forwarding host port 59459 to guest port 80
2026-01-09 17:53:03 (361808): Enabling remote desktop for VM.
2026-01-09 17:53:03 (361808): Required extension pack not installed, remote desktop not enabled.
2026-01-09 17:53:03 (361808): Enabling shared directory for VM.
2026-01-09 17:53:03 (361808): Starting VM using VBoxManage interface. (boinc_eee420736af48864, slot#8)
2026-01-09 17:53:04 (361808): Successfully started VM. (PID = '362514')
2026-01-09 17:53:04 (361808): Reporting VM Process ID to BOINC.
2026-01-09 17:53:04 (361808): Guest Log: BIOS: VirtualBox 7.1.6
2026-01-09 17:53:04 (361808): Guest Log: CPUID EDX: 0x178bfbff
2026-01-09 17:53:04 (361808): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-09 17:53:04 (361808): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-09 17:53:04 (361808): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-09 17:53:04 (361808): Detected: Web Application Enabled (http://localhost:59459)
2026-01-09 17:53:04 (361808): Preference change detected
2026-01-09 17:53:04 (361808): Setting CPU throttle for VM. (50%)
2026-01-09 17:53:04 (361808): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-09 17:53:06 (361808): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-09 17:53:06 (361808): Guest Log: BIOS: Booting from Hard Disk...
2026-01-09 17:53:10 (361808): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-09 17:53:10 (361808): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-09 17:53:10 (361808): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-09 17:53:11 (361808): VM state change detected. (old = 'running', new = 'paused')
2026-01-09 17:53:31 (361808): VM state change detected. (old = 'paused', new = 'running')
2026-01-09 17:53:48 (361808): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-09 17:53:48 (361808): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-09 17:53:56 (361808): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-09 17:53:56 (361808): Guest Log: 00:00:00.000099 main     Log opened 2026-01-09T22:53:33.776639000Z
2026-01-09 17:53:56 (361808): Guest Log: 00:00:00.000182 main     OS Product: Linux
2026-01-09 17:53:56 (361808): Guest Log: 00:00:00.000201 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-09 17:53:56 (361808): Guest Log: 00:00:00.000213 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-09 17:53:56 (361808): Guest Log: 00:00:00.000230 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-09 17:53:56 (361808): Guest Log: 00:00:00.000230 main     Process ID: 1376
2026-01-09 17:53:56 (361808): Guest Log: 00:00:00.000230 main     Package type: LINUX_64BITS_GENERIC
2026-01-09 17:53:56 (361808): Guest Log: 00:00:00.000769 main     5.2.32 r132073 started. Verbose level = 0
2026-01-09 17:53:56 (361808): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-09 17:53:56 (361808): Guest Log: [INFO] Mounting shared directory
2026-01-09 17:53:56 (361808): Guest Log: [INFO] Checking for init_data.xml
2026-01-09 17:54:03 (361808): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-09 17:54:03 (361808): Guest Log: [INFO] Detected branch: prod
2026-01-09 17:54:03 (361808): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-09 17:54:03 (361808): Guest Log: Copying input files
2026-01-09 17:54:04 (361808): Guest Log: Copied input files into RunAtlas.
2026-01-09 17:54:04 (361808): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-09 17:54:04 (361808): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-09 17:54:04 (361808): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-09 17:54:04 (361808): Guest Log: Further information can be found at the LHC@home message board.
2026-01-09 17:54:13 (361808): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-09 17:54:14 (361808): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-09 17:54:14 (361808): Guest Log: 2.6.3.0 1654 0 30164 154959 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-09 17:54:14 (361808): Guest Log: copied the webapp to /var/www
2026-01-09 17:54:14 (361808): Guest Log: ATHENA_PROC_NUMBER=8
2026-01-09 17:54:14 (361808): Guest Log: ATHENA_CORE_NUMBER=8
2026-01-09 17:54:15 (361808): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-09 17:54:15 (361808): Guest Log:  *** Starting ATLAS job. (PandaID=6963188442 taskID=47898826) ***
2026-01-09 19:32:26 (361808): Status Report: Elapsed Time: '6000.000000'
2026-01-09 19:32:26 (361808): Status Report: CPU Time: '18934.350000'
2026-01-09 21:03:11 (361808): Preference change detected
2026-01-09 21:03:11 (361808): Setting CPU throttle for VM. (50%)
2026-01-09 21:03:11 (361808): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-09 21:11:26 (361808): Status Report: Elapsed Time: '12000.000000'
2026-01-09 21:11:26 (361808): Status Report: CPU Time: '41891.370000'
2026-01-09 22:29:55 (361808): Guest Log:  *** Job finished ***
2026-01-09 22:29:55 (361808): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:05,617 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:05,617 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:33,890 | INFO     | [monitor] cgroup control has ended
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:35,596 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139998399883072)>', '<ExcThread(monitor, started 139997587949312)>']
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:35,981 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:35,981 | INFO     | [monitor] control thread has ended
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:40,609 | INFO     | all workflow threads have been joined
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:40,609 | INFO     | end of generic workflow (traces error code: 0)
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:40,610 | INFO     | traces error code: 0
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:40,610 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:40,730 [wrapper] ==== pilot stdout END ====
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:40,734 [wrapper] ==== wrapper stdout RESUME ====
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:40,738 [wrapper] pilotpid: 6129
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:40,741 [wrapper] Pilot exit status: 0
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:40,892 [wrapper] pandaids: 6963188442
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:40,917 [wrapper] cleanup supervisor_pilot 15260 6130
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:40,921 [wrapper] Test setup, not cleaning
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:40,925 [wrapper] apfmon messages muted
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:40,928 [wrapper] ==== wrapper stdout END ====
2026-01-09 22:29:55 (361808): Guest Log: 2026-01-10 03:29:40,931 [wrapper] ==== wrapper stderr END ====
2026-01-09 22:29:55 (361808): Guest Log:  *** Error codes and diagnostics ***
2026-01-09 22:29:55 (361808): Guest Log:     "exeErrorCode": 0,
2026-01-09 22:29:55 (361808): Guest Log:     "exeErrorDiag": "",
2026-01-09 22:29:55 (361808): Guest Log:     "pilotErrorCode": 0,
2026-01-09 22:29:55 (361808): Guest Log:     "pilotErrorDiag": "",
2026-01-09 22:29:55 (361808): Guest Log:  *** Listing of results directory ***
2026-01-09 22:29:55 (361808): Guest Log: total 222576
2026-01-09 22:29:55 (361808): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  9 04:21 queuedata.json
2026-01-09 22:29:55 (361808): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  9 04:21 pilot3.tar.gz
2026-01-09 22:29:55 (361808): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  9 04:22 runpilot2-wrapper.sh
2026-01-09 22:29:55 (361808): Guest Log: -rw-r--r--. 1 atlas atlas    592401 Jan  9 22:53 input.tar.gz
2026-01-09 22:29:55 (361808): Guest Log: -rw-r--r--. 1 atlas atlas     15847 Jan  9 22:53 start_atlas.sh
2026-01-09 22:29:55 (361808): Guest Log: -rw-r--r--. 1 atlas atlas      8939 Jan  9 22:53 init_data.xml
2026-01-09 22:29:55 (361808): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan  9 22:53 EVNT.47898824._001440.pool.root.1 -> /data/./ATLAS.root_0
2026-01-09 22:29:55 (361808): Guest Log: -rw-r--r--. 1 atlas atlas      2520 Jan  9 22:53 pandaJob.out
2026-01-09 22:29:55 (361808): Guest Log: -rw-------. 1 atlas atlas    989375 Jan  9 22:56 agis_schedconf.cvmfs.json
2026-01-09 22:29:55 (361808): Guest Log: drwx------. 5 atlas atlas      4096 Jan  9 22:57 pilot3
2026-01-09 22:29:55 (361808): Guest Log: -rw-------. 1 atlas atlas 219466597 Jan 10 03:27 HITS.47898826._037529.pool.root.1
2026-01-09 22:29:55 (361808): Guest Log: -rw-------. 1 atlas atlas      1034 Jan 10 03:28 memory_monitor_summary.json
2026-01-09 22:29:55 (361808): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 10 03:28 agis_ddmendpoints.agis.ALL.json
2026-01-09 22:29:55 (361808): Guest Log: -rw-------. 1 atlas atlas    453409 Jan 10 03:28 log.47898826._037529.job.log.tgz.1
2026-01-09 22:29:55 (361808): Guest Log: -rw-------. 1 atlas atlas        95 Jan 10 03:28 pilot_heartbeat.json
2026-01-09 22:29:55 (361808): Guest Log: -rw-------. 1 atlas atlas      7795 Jan 10 03:28 heartbeat.json
2026-01-09 22:29:55 (361808): Guest Log: -rw-------. 1 atlas atlas      4877 Jan 10 03:29 pilotlog.txt
2026-01-09 22:29:55 (361808): Guest Log: -rw-------. 1 atlas atlas   1848102 Jan 10 03:29 log.47898826._037529.job.log.1
2026-01-09 22:29:55 (361808): Guest Log: -rw-------. 1 atlas atlas       357 Jan 10 03:29 output.list
2026-01-09 22:29:55 (361808): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 10 03:29 runtime_log
2026-01-09 22:29:55 (361808): Guest Log: -rw-------. 1 atlas atlas   2324480 Jan 10 03:29 result.tar.gz
2026-01-09 22:29:55 (361808): Guest Log: -rw-------. 1 atlas atlas       666 Jan 10 03:29 yzeNDmnBJy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmYrgKDm7H483m.diag
2026-01-09 22:29:55 (361808): Guest Log: -rw-r--r--. 1 atlas atlas      8758 Jan 10 03:29 runtime_log.err
2026-01-09 22:29:55 (361808): Guest Log: Looking for outputfile HITS.47898826._037529.pool.root.1
2026-01-09 22:29:55 (361808): Guest Log: HITS file was successfully produced
2026-01-09 22:29:55 (361808): Guest Log: -rw-------. 1 atlas atlas 219466597 Jan 10 03:27 /home/atlas/RunAtlas/HITS.47898826._037529.pool.root.1
2026-01-09 22:29:55 (361808): Guest Log: Successfully finished the ATLAS job!
2026-01-09 22:29:55 (361808): Guest Log: Copying the results back to the shared directory!
2026-01-09 22:29:55 (361808): Guest Log:  *** Contents of shared directory: ***
2026-01-09 22:29:55 (361808): Guest Log: total 220108
2026-01-09 22:29:55 (361808): Guest Log: -rw-r--r--. 1 root root 222436062 Jan  9 22:53 ATLAS.root_0
2026-01-09 22:29:55 (361808): Guest Log: -rw-r--r--. 1 root root      8939 Jan  9 22:53 init_data.xml
2026-01-09 22:29:55 (361808): Guest Log: -rw-r--r--. 1 root root    592401 Jan  9 22:53 input.tar.gz
2026-01-09 22:29:55 (361808): Guest Log: -rw-r--r--. 1 root root   2324480 Jan 10  2026 result.tar.gz
2026-01-09 22:29:55 (361808): Guest Log: -rw-r--r--. 1 root root     15847 Jan  9 22:53 start_atlas.sh
2026-01-09 22:29:55 (361808): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-09 22:29:55 (361808): VM Completion File Detected.
2026-01-09 22:29:55 (361808): Powering off VM.
2026-01-09 22:29:55 (361808): Successfully stopped VM.
2026-01-09 22:29:55 (361808): Deregistering VM. (boinc_eee420736af48864, slot#8)
2026-01-09 22:29:55 (361808): Removing network bandwidth throttle group from VM.
2026-01-09 22:29:55 (361808): Removing VM from VirtualBox.
2026-01-09 22:30:00 (361808): called boinc_finish(0)

</stderr_txt>
]]>

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