Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:36:15 (23856): wrapper (7.7.26015): starting
17:36:15 (23856): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:36:15] Arguments: --nthreads 8
[2026-01-09 17:36:15] Threads: 8
[2026-01-09 17:36:15] Checking for CVMFS
[2026-01-09 17:36:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:36:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:36:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:36:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:36:16] 2.11.2.0 2830 118437 114832 154959 3 57 18758900 20275200 1 130560 0 27348864 99.799 7895900 32735 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 17:36:16] CVMFS is ok
[2026-01-09 17:36:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:36:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:36:16] Further information can be found at the LHC@home message board.
[2026-01-09 17:36:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:36:16] Checking for apptainer binary...
[2026-01-09 17:36:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:36:16] Running /usr/bin/apptainer --version
[2026-01-09 17:36:16] apptainer version 1.3.2-1.el7
[2026-01-09 17:36:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:36:17] c-204-14.aglt2.org
[2026-01-09 17:36:17] apptainer works
[2026-01-09 17:36:17] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:36:17] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:36:17] Starting ATLAS job with PandaID=6962314336
[2026-01-09 17:36:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
19:09:10 (12335): wrapper (7.7.26015): starting
19:09:10 (12335): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:09:10] Arguments: --nthreads 8
[2026-01-09 19:09:10] Threads: 8
[2026-01-09 19:09:10] This job has been restarted, cleaning up previous attempt
[2026-01-09 19:09:10] Checking for CVMFS
[2026-01-09 19:09:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:09:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:09:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:09:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:09:10] 2.11.2.0 2830 118529 116796 154961 3 39 18889001 20275201 1 130560 0 27421148 99.800 7898698 32736 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 19:09:10] CVMFS is ok
[2026-01-09 19:09:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:09:10] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:09:10] Further information can be found at the LHC@home message board.
[2026-01-09 19:09:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:09:10] Checking for apptainer binary...
[2026-01-09 19:09:10] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:09:10] Running /usr/bin/apptainer --version
[2026-01-09 19:09:10] apptainer version 1.3.2-1.el7
[2026-01-09 19:09:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:09:12] c-204-14.aglt2.org
[2026-01-09 19:09:12] apptainer works
[2026-01-09 19:09:12] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:09:12] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:09:12] Starting ATLAS job with PandaID=6962314336
[2026-01-09 19:09:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 22:02:52]  *** The last 200 lines of the pilot log: ***
[2026-01-09 22:02:52] 2026-01-10 03:02:18,597 | INFO     | monitor loop #762: job 0:6962314336 is in state 'finished'
[2026-01-09 22:02:52] 2026-01-10 03:02:18,597 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 22:02:52] 2026-01-10 03:02:20,465 | INFO     | time since job start (10371s) is within the limit (174528.0s)
[2026-01-09 22:02:52] 2026-01-10 03:02:20,500 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 22:02:52] 2026-01-10 03:02:20,503 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2026-01-09 22:02:52] 2026-01-10 03:02:20,505 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962314336/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 22:02:52] 2026-01-10 03:02:20,506 | INFO     | extracted standard info from prmon json
[2026-01-09 22:02:52] 2026-01-10 03:02:20,506 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 22:02:52] 2026-01-10 03:02:20,506 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 22:02:52] 2026-01-10 03:02:20,506 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 22:02:52] 2026-01-10 03:02:20,506 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 22:02:52] 2026-01-10 03:02:20,510 | INFO     | fitting pss+swap vs Time
[2026-01-09 22:02:52] 2026-01-10 03:02:20,511 | INFO     | sum of square deviations: 1523386702.5
[2026-01-09 22:02:52] 2026-01-10 03:02:20,512 | INFO     | sum of deviations: 17388604825.5
[2026-01-09 22:02:52] 2026-01-10 03:02:20,512 | INFO     | mean x: 1768008955.5
[2026-01-09 22:02:52] 2026-01-10 03:02:20,512 | INFO     | mean y: 2470145.7
[2026-01-09 22:02:52] 2026-01-10 03:02:20,512 | INFO     | intersect: -20178360502.6721
[2026-01-09 22:02:52] 2026-01-10 03:02:20,513 | INFO     | chi2: 2.093404699850364
[2026-01-09 22:02:52] 2026-01-10 03:02:20,513 | INFO     | sum of square deviations: 1392881930.0
[2026-01-09 22:02:52] 2026-01-10 03:02:20,514 | INFO     | sum of deviations: 27896016566.999992
[2026-01-09 22:02:52] 2026-01-10 03:02:20,515 | INFO     | mean x: 1768008803.0
[2026-01-09 22:02:52] 2026-01-10 03:02:20,515 | INFO     | mean y: 2482111.018181818
[2026-01-09 22:02:52] 2026-01-10 03:02:20,515 | INFO     | intersect: -35406407757.40723
[2026-01-09 22:02:52] 2026-01-10 03:02:20,515 | INFO     | chi2: 1.322668782044692
[2026-01-09 22:02:52] 2026-01-10 03:02:20,515 | INFO     | current chi2=1.322668782044692 (change=36.81733961239143 %)
[2026-01-09 22:02:52] 2026-01-10 03:02:20,516 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 22:02:52] 2026-01-10 03:02:20,517 | INFO     | sum of deviations: 26964225859.500004
[2026-01-09 22:02:52] 2026-01-10 03:02:20,517 | INFO     | mean x: 1768008650.5
[2026-01-09 22:02:52] 2026-01-10 03:02:20,517 | INFO     | mean y: 2480953.80625
[2026-01-09 22:02:52] 2026-01-10 03:02:20,517 | INFO     | intersect: -37533773533.24078
[2026-01-09 22:02:52] 2026-01-10 03:02:20,518 | INFO     | chi2: 1.3231567888984492
[2026-01-09 22:02:52] 2026-01-10 03:02:20,518 | INFO     | current chi2=1.3231567888984492 (change=-0.036895620459323125 %)
[2026-01-09 22:02:52] 2026-01-10 03:02:20,518 | INFO     | right removable region: 159
[2026-01-09 22:02:52] 2026-01-10 03:02:20,519 | INFO     | sum of square deviations: 1392881930.0
[2026-01-09 22:02:52] 2026-01-10 03:02:20,520 | INFO     | sum of deviations: -5847321163.999996
[2026-01-09 22:02:52] 2026-01-10 03:02:20,520 | INFO     | mean x: 1768009108.0
[2026-01-09 22:02:52] 2026-01-10 03:02:20,520 | INFO     | mean y: 2496893.721212121
[2026-01-09 22:02:52] 2026-01-10 03:02:20,520 | INFO     | intersect: 7424602710.940878
[2026-01-09 22:02:52] 2026-01-10 03:02:20,521 | INFO     | chi2: 0.8027384107218172
[2026-01-09 22:02:52] 2026-01-10 03:02:20,521 | INFO     | current chi2=0.8027384107218172 (change=61.653930996753914 %)
[2026-01-09 22:02:52] 2026-01-10 03:02:20,521 | INFO     | sum of square deviations: 1270051720.0
[2026-01-09 22:02:52] 2026-01-10 03:02:20,522 | INFO     | sum of deviations: -6170894078.0
[2026-01-09 22:02:52] 2026-01-10 03:02:20,522 | INFO     | mean x: 1768009260.5
[2026-01-09 22:02:52] 2026-01-10 03:02:20,523 | INFO     | mean y: 2497312.525
[2026-01-09 22:02:52] 2026-01-10 03:02:20,523 | INFO     | intersect: 8592854463.861017
[2026-01-09 22:02:52] 2026-01-10 03:02:20,523 | INFO     | chi2: 0.7936444746717892
[2026-01-09 22:02:52] 2026-01-10 03:02:20,523 | INFO     | current chi2=0.7936444746717892 (change=1.132864196924468 %)
[2026-01-09 22:02:52] 2026-01-10 03:02:20,523 | INFO     | left removable region: 20
[2026-01-09 22:02:52] 2026-01-10 03:02:20,524 | INFO     | sum of square deviations: 832722590.0
[2026-01-09 22:02:52] 2026-01-10 03:02:20,525 | INFO     | sum of deviations: 2451281523.0000005
[2026-01-09 22:02:52] 2026-01-10 03:02:20,525 | INFO     | mean x: 1768009230.0
[2026-01-09 22:02:52] 2026-01-10 03:02:20,525 | INFO     | mean y: 2513285.4604316545
[2026-01-09 22:02:52] 2026-01-10 03:02:20,525 | INFO     | intersect: -5201967066.144366
[2026-01-09 22:02:52] 2026-01-10 03:02:20,525 | INFO     | chi2: 0.0005663861592132055
[2026-01-09 22:02:52] 2026-01-10 03:02:20,526 | INFO     | current memory leak: 2.94 B/s (using 139 data points, chi2=0.00)
[2026-01-09 22:02:52] 2026-01-10 03:02:20,526 | INFO     | could have reported an average CPU frequency of 2023 MHz (9 samples)
[2026-01-09 22:02:52] 2026-01-10 03:02:20,526 | INFO     | ..............................
[2026-01-09 22:02:52] 2026-01-10 03:02:20,526 | INFO     | . Timing measurements:
[2026-01-09 22:02:52] 2026-01-10 03:02:20,526 | INFO     | . get job = 0 s
[2026-01-09 22:02:52] 2026-01-10 03:02:20,527 | INFO     | . initial setup = 1 s
[2026-01-09 22:02:52] 2026-01-10 03:02:20,527 | INFO     | . payload setup = 8 s
[2026-01-09 22:02:52] 2026-01-10 03:02:20,527 | INFO     | . stage-in = 0 s
[2026-01-09 22:02:52] 2026-01-10 03:02:20,527 | INFO     | . payload execution = 10330 s
[2026-01-09 22:02:52] 2026-01-10 03:02:20,527 | INFO     | . stage-out = 2 s
[2026-01-09 22:02:52] 2026-01-10 03:02:20,527 | INFO     | . log creation = 0 s
[2026-01-09 22:02:52] 2026-01-10 03:02:20,527 | INFO     | ..............................
[2026-01-09 22:02:52] 2026-01-10 03:02:20,616 | INFO     | 
[2026-01-09 22:02:52] 2026-01-10 03:02:20,616 | INFO     | job summary report
[2026-01-09 22:02:52] 2026-01-10 03:02:20,616 | INFO     | --------------------------------------------------
[2026-01-09 22:02:52] 2026-01-10 03:02:20,616 | INFO     | PanDA job id: 6962314336
[2026-01-09 22:02:52] 2026-01-10 03:02:20,616 | INFO     | task id: 47898826
[2026-01-09 22:02:52] 2026-01-10 03:02:20,617 | INFO     | errors: (none)
[2026-01-09 22:02:52] 2026-01-10 03:02:20,617 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 22:02:52] 2026-01-10 03:02:20,617 | INFO     | pilot state: finished 
[2026-01-09 22:02:52] 2026-01-10 03:02:20,617 | INFO     | transexitcode: 0
[2026-01-09 22:02:52] 2026-01-10 03:02:20,617 | INFO     | exeerrorcode: 0
[2026-01-09 22:02:52] 2026-01-10 03:02:20,618 | INFO     | exeerrordiag: 
[2026-01-09 22:02:52] 2026-01-10 03:02:20,618 | INFO     | exitcode: 0
[2026-01-09 22:02:52] 2026-01-10 03:02:20,618 | INFO     | exitmsg: OK
[2026-01-09 22:02:52] 2026-01-10 03:02:20,618 | INFO     | cpuconsumptiontime: 78197 s
[2026-01-09 22:02:52] 2026-01-10 03:02:20,618 | INFO     | nevents: 400
[2026-01-09 22:02:52] 2026-01-10 03:02:20,618 | INFO     | neventsw: 0
[2026-01-09 22:02:52] 2026-01-10 03:02:20,619 | INFO     | pid: 22395
[2026-01-09 22:02:52] 2026-01-10 03:02:20,619 | INFO     | pgrp: 22395
[2026-01-09 22:02:52] 2026-01-10 03:02:20,619 | INFO     | corecount: 8
[2026-01-09 22:02:52] 2026-01-10 03:02:20,619 | INFO     | event service: False
[2026-01-09 22:02:52] 2026-01-10 03:02:20,619 | INFO     | sizes: {0: 2283737, 1: 2283992, 7: 2284254, 12: 2284282, 10342: 2312952, 10346: 2322134, 10354: 2322336}
[2026-01-09 22:02:52] 2026-01-10 03:02:20,619 | INFO     | --------------------------------------------------
[2026-01-09 22:02:52] 2026-01-10 03:02:20,620 | INFO     | 
[2026-01-09 22:02:52] 2026-01-10 03:02:20,620 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 22:02:52] 2026-01-10 03:02:20,649 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,649 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,649 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,649 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,650 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,650 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,650 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,650 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,650 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,650 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,651 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,651 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,651 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,651 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,651 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,652 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,652 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,652 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 22:02:52] 2026-01-10 03:02:20,652 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,652 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 22:02:52] 2026-01-10 03:02:20,653 | INFO     | job 6962314336 has completed (purged errors)
[2026-01-09 22:02:52] 2026-01-10 03:02:20,653 | INFO     | overall cleanup function is called
[2026-01-09 22:02:52] 2026-01-10 03:02:21,661 | INFO     | --- collectZombieJob: --- 10, [22395]
[2026-01-09 22:02:52] 2026-01-10 03:02:21,661 | INFO     | zombie collector waiting for pid 22395
[2026-01-09 22:02:52] 2026-01-10 03:02:21,662 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 22:02:52] 2026-01-10 03:02:21,662 | INFO     | collected zombie processes
[2026-01-09 22:02:52] 2026-01-10 03:02:21,662 | INFO     | will attempt to kill all subprocesses of pid=22395
[2026-01-09 22:02:52] 2026-01-10 03:02:21,751 | INFO     | process IDs to be killed: [22395] (in reverse order)
[2026-01-09 22:02:52] 2026-01-10 03:02:21,808 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 22:02:52] 2026-01-10 03:02:21,808 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 22:02:52] 2026-01-10 03:02:21,812 | INFO     | did not find any defunct processes belonging to 22395
[2026-01-09 22:02:52] 2026-01-10 03:02:21,816 | INFO     | did not find any defunct processes belonging to 22395
[2026-01-09 22:02:52] 2026-01-10 03:02:21,816 | INFO     | ready for new job
[2026-01-09 22:02:52] 2026-01-10 03:02:21,816 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 22:02:52] 2026-01-10 03:02:21,818 | INFO     | ***************************************
[2026-01-09 22:02:52] 2026-01-10 03:02:21,818 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 22:02:52] 2026-01-10 03:02:21,818 | INFO     | ***************************************
[2026-01-09 22:02:52] 2026-01-10 03:02:21,819 | INFO     | 
[2026-01-09 22:02:52] 2026-01-10 03:02:21,819 | INFO     | architecture information:
[2026-01-09 22:02:52] 2026-01-10 03:02:21,820 | INFO     | executing command: cat /etc/os-release
[2026-01-09 22:02:52] 2026-01-10 03:02:21,837 | INFO     | cat /etc/os-release:
[2026-01-09 22:02:52] NAME="CentOS Linux"
[2026-01-09 22:02:52] VERSION="7 (Core)"
[2026-01-09 22:02:52] ID="centos"
[2026-01-09 22:02:52] ID_LIKE="rhel fedora"
[2026-01-09 22:02:52] VERSION_ID="7"
[2026-01-09 22:02:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 22:02:52] ANSI_COLOR="0;31"
[2026-01-09 22:02:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 22:02:52] HOME_URL="https://www.centos.org/"
[2026-01-09 22:02:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 22:02:52] 
[2026-01-09 22:02:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 22:02:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 22:02:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 22:02:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 22:02:52] 
[2026-01-09 22:02:52] 2026-01-10 03:02:21,837 | INFO     | ***************************************
[2026-01-09 22:02:52] 2026-01-10 03:02:22,340 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 22:02:52] 2026-01-10 03:02:22,361 | INFO     | sufficient remaining disk space (18529386496 B)
[2026-01-09 22:02:52] 2026-01-10 03:02:22,361 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 22:02:52] 2026-01-10 03:02:22,361 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 22:02:52] 2026-01-10 03:02:22,361 | INFO     | update_server=False
[2026-01-09 22:02:52] 2026-01-10 03:02:22,362 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 22:02:52] 2026-01-10 03:02:22,362 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-09 22:02:52] 2026-01-10 03:02:22,363 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 22:02:52] 2026-01-10 03:02:22,363 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 22:02:52] 2026-01-10 03:02:22,363 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 22:02:52] 2026-01-10 03:02:22,363 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:02:52] 2026-01-10 03:02:22,363 | INFO     | aborting loop
[2026-01-09 22:02:52] 2026-01-10 03:02:22,364 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 22:02:52] 2026-01-10 03:02:23,128 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 22:02:52] 2026-01-10 03:02:23,367 | INFO     | [job] retrieve thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:23,369 | INFO     | [job] job monitor thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:23,370 | INFO     | [job] queue monitor thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:23,374 | INFO     | [data] copytool_in thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:23,438 | INFO     | all data control threads have been joined
[2026-01-09 22:02:52] 2026-01-10 03:02:23,528 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:23,532 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 22:02:52] 2026-01-10 03:02:23,634 | INFO     | all payload control threads have been joined
[2026-01-09 22:02:52] 2026-01-10 03:02:23,771 | INFO     | all job control threads have been joined
[2026-01-09 22:02:52] 2026-01-10 03:02:23,946 | INFO     | [job] validate thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:24,031 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:24,135 | INFO     | [payload] failed_post thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:24,444 | INFO     | [data] control thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:24,471 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:24,640 | INFO     | [payload] control thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:24,723 | INFO     | [payload] validate_post thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:24,723 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:24,777 | INFO     | [job] control thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:25,134 | INFO     | [data] copytool_out thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:27,537 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 22:02:52] 2026-01-10 03:02:45,824 | INFO     | [monitor] cgroup control has ended
[2026-01-09 22:02:52] 2026-01-10 03:02:46,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140213536163648)>', '<ExcThread(monitor, started 140212780898048)>']
[2026-01-09 22:02:52] 2026-01-10 03:02:47,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 22:02:52] 2026-01-10 03:02:47,471 | INFO     | [monitor] control thread has ended
[2026-01-09 22:02:52] 2026-01-10 03:02:51,778 | INFO     | all workflow threads have been joined
[2026-01-09 22:02:52] 2026-01-10 03:02:51,779 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 22:02:52] 2026-01-10 03:02:51,779 | INFO     | traces error code: 0
[2026-01-09 22:02:52] 2026-01-10 03:02:51,780 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 22:02:52] 2026-01-10 03:02:51,887 [wrapper] ==== pilot stdout END ====
[2026-01-09 22:02:52] 2026-01-10 03:02:51,891 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 22:02:52] 2026-01-10 03:02:51,896 [wrapper] pilotpid: 16031
[2026-01-09 22:02:52] 2026-01-10 03:02:51,900 [wrapper] Pilot exit status: 0
[2026-01-09 22:02:52] 2026-01-10 03:02:51,921 [wrapper] pandaids: 6962314336 6962314336
[2026-01-09 22:02:52] 2026-01-10 03:02:51,965 [wrapper] cleanup supervisor_pilot  2336 16032
[2026-01-09 22:02:52] 2026-01-10 03:02:51,971 [wrapper] Test setup, not cleaning
[2026-01-09 22:02:52] 2026-01-10 03:02:51,976 [wrapper] apfmon messages muted
[2026-01-09 22:02:52] 2026-01-10 03:02:51,981 [wrapper] ==== wrapper stdout END ====
[2026-01-09 22:02:52] 2026-01-10 03:02:51,985 [wrapper] ==== wrapper stderr END ====
[2026-01-09 22:02:52]  *** Error codes and diagnostics ***
[2026-01-09 22:02:52]     "exeErrorCode": 0,
[2026-01-09 22:02:52]     "exeErrorDiag": "",
[2026-01-09 22:02:52]     "pilotErrorCode": 0,
[2026-01-09 22:02:52]     "pilotErrorDiag": "",
[2026-01-09 22:02:52]  *** Listing of results directory ***
[2026-01-09 22:02:52] total 666012
[2026-01-09 22:02:52] drwx------ 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-09 22:02:52] -rwx------ 1 boincer umatlas     36322 Jan  7 15:54 runpilot2-wrapper.sh
[2026-01-09 22:02:52] -rw-r--r-- 1 boincer umatlas      5112 Jan  7 15:55 queuedata.json
[2026-01-09 22:02:52] -rw-r--r-- 1 boincer umatlas    579449 Jan  7 15:55 pilot3.tar.gz
[2026-01-09 22:02:52] -rw-r--r-- 1 boincer umatlas       100 Jan  9 17:36 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 22:02:52] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 17:36 run_atlas
[2026-01-09 22:02:52] -rw-r--r-- 1 boincer umatlas       105 Jan  9 17:36 job.xml
[2026-01-09 22:02:52] -rw-r--r-- 3 boincer umatlas 227288816 Jan  9 17:36 EVNT.47898824._000272.pool.root.1
[2026-01-09 22:02:52] -rw-r--r-- 3 boincer umatlas 227288816 Jan  9 17:36 ATLAS.root_0
[2026-01-09 22:02:52] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 17:36 start_atlas.sh
[2026-01-09 22:02:52] drwxrwx--x 2 boincer umatlas      4096 Jan  9 17:36 shared
[2026-01-09 22:02:52] -rw-r--r-- 2 boincer umatlas    592388 Jan  9 17:36 input.tar.gz
[2026-01-09 22:02:52] -rw-r--r-- 1 boincer umatlas         0 Jan  9 17:36 boinc_lockfile
[2026-01-09 22:02:52] -rw-r--r-- 1 boincer umatlas      2516 Jan  9 19:09 pandaJob.out
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas        57 Jan  9 19:09 setup.sh.local
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas    989374 Jan  9 19:09 agis_schedconf.cvmfs.json
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas 219814085 Jan  9 22:01 HITS.47898826._011097.pool.root.1
[2026-01-09 22:02:52] -rw-r--r-- 1 boincer umatlas       531 Jan  9 22:01 boinc_task_state.xml
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas        96 Jan  9 22:02 pilot_heartbeat.json
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas      1050 Jan  9 22:02 memory_monitor_summary.json
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas   1516240 Jan  9 22:02 agis_ddmendpoints.agis.ALL.json
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas    401251 Jan  9 22:02 log.47898826._011097.job.log.tgz.1
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas      7841 Jan  9 22:02 heartbeat.json
[2026-01-09 22:02:52] -rw-r--r-- 1 boincer umatlas      5912 Jan  9 22:02 init_data.xml
[2026-01-09 22:02:52] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 22:02 boinc_mmap_file
[2026-01-09 22:02:52] -rw-r--r-- 1 boincer umatlas        29 Jan  9 22:02 wrapper_checkpoint.txt
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas      4552 Jan  9 22:02 pilotlog.txt
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas   1442058 Jan  9 22:02 log.47898826._011097.job.log.1
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas       357 Jan  9 22:02 output.list
[2026-01-09 22:02:52] -rw-r--r-- 1 boincer umatlas       620 Jan  9 22:02 runtime_log
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas   1863680 Jan  9 22:02 result.tar.gz
[2026-01-09 22:02:52] -rw-r--r-- 1 boincer umatlas      9428 Jan  9 22:02 runtime_log.err
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas       788 Jan  9 22:02 mILLDmPjpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmCTdKDm9KLt0m.diag
[2026-01-09 22:02:52] -rw-r--r-- 1 boincer umatlas     23137 Jan  9 22:02 stderr.txt
[2026-01-09 22:02:52] HITS file was successfully produced:
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas 219814085 Jan  9 22:01 shared/HITS.pool.root.1
[2026-01-09 22:02:52]  *** Contents of shared directory: ***
[2026-01-09 22:02:52] total 439048
[2026-01-09 22:02:52] -rw-r--r-- 3 boincer umatlas 227288816 Jan  9 17:36 ATLAS.root_0
[2026-01-09 22:02:52] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 17:36 start_atlas.sh
[2026-01-09 22:02:52] -rw-r--r-- 2 boincer umatlas    592388 Jan  9 17:36 input.tar.gz
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas 219814085 Jan  9 22:01 HITS.pool.root.1
[2026-01-09 22:02:52] -rw------- 1 boincer umatlas   1863680 Jan  9 22:02 result.tar.gz
22:02:53 (12335): run_atlas exited; CPU time 78184.633219
22:02:53 (12335): called boinc_finish(0)

</stderr_txt>
]]>

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