Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
16:50:41 (871782): wrapper (7.7.26015): starting
16:50:41 (871782): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 16:50:41] Arguments: --nthreads 12
[2026-01-10 16:50:41] Threads: 12
[2026-01-10 16:50:41] Checking for CVMFS
[2026-01-10 16:50:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 16:50:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 16:50:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 16:50:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 16:50:41] 2.13.3.0 328575 633 69172 154994 2 253 3907915 6144001 917 130560 3 1634329 99.950 150017 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-10 16:50:41] CVMFS is ok
[2026-01-10 16:50:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 16:50:41] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-10 16:50:41] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-10 16:50:41] Further information can be found at the LHC@home message board.
[2026-01-10 16:50:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 16:50:41] Checking for apptainer binary...
[2026-01-10 16:50:41] apptainer is not installed, using version from CVMFS
[2026-01-10 16:50:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 16:50:43] XeonFire
[2026-01-10 16:50:43] apptainer works
[2026-01-10 16:50:43] Set ATHENA_PROC_NUMBER=12
[2026-01-10 16:50:43] Set ATHENA_CORE_NUMBER=12
[2026-01-10 16:50:43] Starting ATLAS job with PandaID=6962314781
[2026-01-10 16:50:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 18:10:43]  *** The last 200 lines of the pilot log: ***
[2026-01-10 18:10:43] 2026-01-11 00:09:55,300 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/15/PanDA_Pilot-6962314781/log.47898826._011473.job.log.tgz.1 /var/lib/boinc-client/slots/15/log.4789
[2026-01-10 18:10:43] 2026-01-11 00:09:55,319 | INFO     | adding to output.list: log.47898826._011473.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/05/e2/log.47898826._011473.job.log.tg
[2026-01-10 18:10:43] 2026-01-11 00:09:55,320 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 18:10:43] 2026-01-11 00:09:55,320 | INFO     | summary of transferred files:
[2026-01-10 18:10:43] 2026-01-11 00:09:55,320 | INFO     |  -- lfn=log.47898826._011473.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 18:10:43] 2026-01-11 00:09:55,320 | INFO     | stage-out finished correctly
[2026-01-10 18:10:43] 2026-01-11 00:09:55,389 | INFO     | time since job start (4727s) is within the limit (174528.0s)
[2026-01-10 18:10:43] 2026-01-11 00:09:55,391 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 18:10:43] 2026-01-11 00:09:56,753 | INFO     | PID=875853 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 18:10:43] 2026-01-11 00:09:56,753 | INFO     | .. there are 2 such processes running
[2026-01-10 18:10:43] 2026-01-11 00:09:56,952 | INFO     | monitor loop #346: job 0:6962314781 is in state 'finished'
[2026-01-10 18:10:43] 2026-01-11 00:09:56,952 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:10:43] 2026-01-11 00:09:57,700 | INFO     | job 6962314781 has state=finished
[2026-01-10 18:10:43] 2026-01-11 00:09:57,700 | INFO     | preparing for final server update for job 6962314781 in state='finished'
[2026-01-10 18:10:43] 2026-01-11 00:09:57,701 | INFO     | this job has now completed (state=finished)
[2026-01-10 18:10:43] 2026-01-11 00:09:57,701 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 18:10:43] 2026-01-11 00:09:57,701 | INFO     | log transfer has been attempted: DONE
[2026-01-10 18:10:43] 2026-01-11 00:09:57,701 | INFO     | job 6962314781 has finished - writing final server update
[2026-01-10 18:10:43] 2026-01-11 00:09:57,701 | INFO     | total number of processed events: 400 (read)
[2026-01-10 18:10:43] 2026-01-11 00:09:57,705 | INFO     | executing command: lscpu
[2026-01-10 18:10:43] 2026-01-11 00:09:57,753 | INFO     | time since job start (4729s) is within the limit (174528.0s)
[2026-01-10 18:10:43] 2026-01-11 00:09:57,795 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 18:10:43] 2026-01-11 00:09:59,455 | INFO     | monitor loop #347: job 0:6962314781 is in state 'finished'
[2026-01-10 18:10:43] 2026-01-11 00:09:59,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:10:43] 2026-01-11 00:09:59,759 | INFO     | time since job start (4731s) is within the limit (174528.0s)
[2026-01-10 18:10:43] 2026-01-11 00:10:01,761 | INFO     | time since job start (4733s) is within the limit (174528.0s)
[2026-01-10 18:10:43] 2026-01-11 00:10:01,958 | INFO     | monitor loop #348: job 0:6962314781 is in state 'finished'
[2026-01-10 18:10:43] 2026-01-11 00:10:01,958 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:10:43] 2026-01-11 00:10:03,767 | INFO     | time since job start (4735s) is within the limit (174528.0s)
[2026-01-10 18:10:43] 2026-01-11 00:10:04,461 | INFO     | monitor loop #349: job 0:6962314781 is in state 'finished'
[2026-01-10 18:10:43] 2026-01-11 00:10:04,461 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:10:43] 2026-01-11 00:10:05,768 | INFO     | time since job start (4737s) is within the limit (174528.0s)
[2026-01-10 18:10:43] 2026-01-11 00:10:06,962 | INFO     | monitor loop #350: job 0:6962314781 is in state 'finished'
[2026-01-10 18:10:43] 2026-01-11 00:10:06,962 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:10:43] 2026-01-11 00:10:07,773 | INFO     | time since job start (4739s) is within the limit (174528.0s)
[2026-01-10 18:10:43] 2026-01-11 00:10:09,465 | INFO     | monitor loop #351: job 0:6962314781 is in state 'finished'
[2026-01-10 18:10:43] 2026-01-11 00:10:09,465 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 18:10:43] 2026-01-11 00:10:09,779 | INFO     | time since job start (4741s) is within the limit (174528.0s)
[2026-01-10 18:10:43] 2026-01-11 00:10:10,629 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 18:10:43] 2026-01-11 00:10:10,640 | INFO     | found 44 cores (22 cores per socket, 2 sockets) HT, CPU MHz: 2684.647852272727
[2026-01-10 18:10:43] 2026-01-11 00:10:10,648 | INFO     | using path: /var/lib/boinc-client/slots/15/PanDA_Pilot-6962314781/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 18:10:43] 2026-01-11 00:10:10,649 | INFO     | extracted standard info from prmon json
[2026-01-10 18:10:43] 2026-01-11 00:10:10,649 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 18:10:43] 2026-01-11 00:10:10,649 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 18:10:43] 2026-01-11 00:10:10,649 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 18:10:43] 2026-01-11 00:10:10,649 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 18:10:43] 2026-01-11 00:10:10,650 | INFO     | fitting pss+swap vs Time
[2026-01-10 18:10:43] 2026-01-11 00:10:10,650 | INFO     | sum of square deviations: 106336877.5
[2026-01-10 18:10:43] 2026-01-11 00:10:10,651 | INFO     | sum of deviations: 1568469484.4999998
[2026-01-10 18:10:43] 2026-01-11 00:10:10,651 | INFO     | mean x: 1768087905.5
[2026-01-10 18:10:43] 2026-01-11 00:10:10,651 | INFO     | mean y: 2699956.1
[2026-01-10 18:10:43] 2026-01-11 00:10:10,651 | INFO     | intersect: -26076605651.592583
[2026-01-10 18:10:43] 2026-01-11 00:10:10,651 | INFO     | chi2: 0.15792462556922532
[2026-01-10 18:10:43] 2026-01-11 00:10:10,651 | INFO     | current memory leak: 14.75 B/s (using 70 data points, chi2=0.16)
[2026-01-10 18:10:43] 2026-01-11 00:10:10,651 | INFO     | could have reported an average CPU frequency of 2445 MHz (6 samples)
[2026-01-10 18:10:43] 2026-01-11 00:10:10,651 | INFO     | ..............................
[2026-01-10 18:10:43] 2026-01-11 00:10:10,652 | INFO     | . Timing measurements:
[2026-01-10 18:10:43] 2026-01-11 00:10:10,652 | INFO     | . get job = 0 s
[2026-01-10 18:10:43] 2026-01-11 00:10:10,652 | INFO     | . initial setup = 14 s
[2026-01-10 18:10:43] 2026-01-11 00:10:10,652 | INFO     | . payload setup = 6 s
[2026-01-10 18:10:43] 2026-01-11 00:10:10,652 | INFO     | . stage-in = 0 s
[2026-01-10 18:10:43] 2026-01-11 00:10:10,652 | INFO     | . payload execution = 4698 s
[2026-01-10 18:10:43] 2026-01-11 00:10:10,652 | INFO     | . stage-out = 0 s
[2026-01-10 18:10:43] 2026-01-11 00:10:10,652 | INFO     | . log creation = 0 s
[2026-01-10 18:10:43] 2026-01-11 00:10:10,652 | INFO     | ..............................
[2026-01-10 18:10:43] 2026-01-11 00:10:10,741 | INFO     | 
[2026-01-10 18:10:43] 2026-01-11 00:10:10,741 | INFO     | job summary report
[2026-01-10 18:10:43] 2026-01-11 00:10:10,741 | INFO     | --------------------------------------------------
[2026-01-10 18:10:43] 2026-01-11 00:10:10,741 | INFO     | PanDA job id: 6962314781
[2026-01-10 18:10:43] 2026-01-11 00:10:10,741 | INFO     | task id: 47898826
[2026-01-10 18:10:43] 2026-01-11 00:10:10,741 | INFO     | errors: (none)
[2026-01-10 18:10:43] 2026-01-11 00:10:10,741 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | pilot state: finished 
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | transexitcode: 0
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | exeerrorcode: 0
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | exeerrordiag: 
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | exitcode: 0
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | exitmsg: OK
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | cpuconsumptiontime: 49201 s
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | nevents: 400
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | neventsw: 0
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | pid: 882861
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | pgrp: 882861
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | corecount: 12
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | event service: False
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | sizes: {0: 2283801, 1: 2284000, 6: 2284262, 11: 2284290, 4709: 2310366, 4711: 2319564, 4726: 2319702}
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | --------------------------------------------------
[2026-01-10 18:10:43] 2026-01-11 00:10:10,742 | INFO     | 
[2026-01-10 18:10:43] 2026-01-11 00:10:10,743 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/15
[2026-01-10 18:10:43] 2026-01-11 00:10:10,761 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,762 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,762 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,762 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,762 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,762 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,762 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,762 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,763 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,763 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,763 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,763 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,763 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,763 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,763 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,763 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,763 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,764 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 18:10:43] 2026-01-11 00:10:10,764 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,764 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 18:10:43] 2026-01-11 00:10:10,764 | INFO     | job 6962314781 has completed (purged errors)
[2026-01-10 18:10:43] 2026-01-11 00:10:10,764 | INFO     | overall cleanup function is called
[2026-01-10 18:10:43] 2026-01-11 00:10:11,773 | INFO     | --- collectZombieJob: --- 10, [882861]
[2026-01-10 18:10:43] 2026-01-11 00:10:11,773 | INFO     | zombie collector waiting for pid 882861
[2026-01-10 18:10:43] 2026-01-11 00:10:11,773 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 18:10:43] 2026-01-11 00:10:11,773 | INFO     | collected zombie processes
[2026-01-10 18:10:43] 2026-01-11 00:10:11,774 | INFO     | will attempt to kill all subprocesses of pid=882861
[2026-01-10 18:10:43] 2026-01-11 00:10:12,221 | INFO     | process IDs to be killed: [882861] (in reverse order)
[2026-01-10 18:10:43] 2026-01-11 00:10:12,459 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 18:10:43] 2026-01-11 00:10:12,459 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 18:10:43] 2026-01-11 00:10:12,468 | INFO     | did not find any defunct processes belonging to 882861
[2026-01-10 18:10:43] 2026-01-11 00:10:12,475 | INFO     | did not find any defunct processes belonging to 882861
[2026-01-10 18:10:43] 2026-01-11 00:10:12,475 | INFO     | ready for new job
[2026-01-10 18:10:43] 2026-01-11 00:10:12,475 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 18:10:43] 2026-01-11 00:10:12,477 | INFO     | ***************************************
[2026-01-10 18:10:43] 2026-01-11 00:10:12,477 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 18:10:43] 2026-01-11 00:10:12,477 | INFO     | ***************************************
[2026-01-10 18:10:43] 2026-01-11 00:10:12,477 | INFO     | 
[2026-01-10 18:10:43] 2026-01-11 00:10:12,482 | INFO     | architecture information:
[2026-01-10 18:10:43] 2026-01-11 00:10:12,482 | INFO     | executing command: cat /etc/os-release
[2026-01-10 18:10:43] 2026-01-11 00:10:12,506 | INFO     | cat /etc/os-release:
[2026-01-10 18:10:43] NAME="CentOS Linux"
[2026-01-10 18:10:43] VERSION="7 (Core)"
[2026-01-10 18:10:43] ID="centos"
[2026-01-10 18:10:43] ID_LIKE="rhel fedora"
[2026-01-10 18:10:43] VERSION_ID="7"
[2026-01-10 18:10:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 18:10:43] ANSI_COLOR="0;31"
[2026-01-10 18:10:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 18:10:43] HOME_URL="https://www.centos.org/"
[2026-01-10 18:10:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 18:10:43] 
[2026-01-10 18:10:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 18:10:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 18:10:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 18:10:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 18:10:43] 
[2026-01-10 18:10:43] 2026-01-11 00:10:12,506 | INFO     | ***************************************
[2026-01-10 18:10:43] 2026-01-11 00:10:13,009 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/15
[2026-01-10 18:10:43] 2026-01-11 00:10:13,023 | INFO     | sufficient remaining disk space (1805463322624 B)
[2026-01-10 18:10:43] 2026-01-11 00:10:13,024 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 18:10:43] 2026-01-11 00:10:13,024 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 18:10:43] 2026-01-11 00:10:13,024 | INFO     | update_server=False
[2026-01-10 18:10:43] 2026-01-11 00:10:13,024 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 18:10:43] 2026-01-11 00:10:13,025 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 18:10:43] 2026-01-11 00:10:13,025 | INFO     | aborting loop
[2026-01-10 18:10:43] 2026-01-11 00:10:13,412 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 18:10:43] 2026-01-11 00:10:13,571 | INFO     | all data control threads have been joined
[2026-01-10 18:10:43] 2026-01-11 00:10:13,861 | INFO     | all payload control threads have been joined
[2026-01-10 18:10:43] 2026-01-11 00:10:14,030 | INFO     | [job] retrieve thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:14,030 | INFO     | [job] job monitor thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:14,041 | INFO     | [payload] validate_post thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:14,177 | INFO     | [data] copytool_in thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:14,576 | INFO     | [data] control thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:14,588 | INFO     | all job control threads have been joined
[2026-01-10 18:10:43] 2026-01-11 00:10:14,665 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:14,808 | INFO     | [job] validate thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:14,866 | INFO     | [payload] control thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:15,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 18:10:43] 2026-01-11 00:10:15,013 | INFO     | [payload] failed_post thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:15,086 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:15,235 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:15,257 | INFO     | [monitor] cgroup control has ended
[2026-01-10 18:10:43] 2026-01-11 00:10:15,317 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:15,417 | INFO     | [data] copytool_out thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:15,593 | INFO     | [job] control thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:15,713 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 18:10:43] 2026-01-11 00:10:16,717 | INFO     | [job] queue monitor thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:19,007 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 18:10:43] 2026-01-11 00:10:19,408 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127494419826496)>', '<ExcThread(monitor, started 127493730191104)>']
[2026-01-10 18:10:43] 2026-01-11 00:10:24,433 | INFO     | all workflow threads have been joined
[2026-01-10 18:10:43] 2026-01-11 00:10:24,433 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 18:10:43] 2026-01-11 00:10:24,433 | INFO     | traces error code: 0
[2026-01-10 18:10:43] 2026-01-11 00:10:24,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 18:10:43] 2026-01-11 00:10:43,172 | INFO     | PID=875853 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 18:10:43] 2026-01-11 00:10:43,172 | INFO     | .. there are 2 such processes running
[2026-01-10 18:10:43] 2026-01-11 00:10:43,173 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 18:10:43] 2026-01-11 00:10:43,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 18:10:43] 2026-01-11 00:10:43,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 18:10:43] 2026-01-11 00:10:43,173 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 18:10:43] 2026-01-11 00:10:43,173 | INFO     | [monitor] control thread has ended
[2026-01-10 18:10:43] 2026-01-11 00:10:43,280 [wrapper] ==== pilot stdout END ====
[2026-01-10 18:10:43] 2026-01-11 00:10:43,283 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 18:10:43] 2026-01-11 00:10:43,286 [wrapper] pilotpid: 875853
[2026-01-10 18:10:43] 2026-01-11 00:10:43,290 [wrapper] Pilot exit status: 0
[2026-01-10 18:10:43] 2026-01-11 00:10:43,300 [wrapper] pandaids: 6962314781
[2026-01-10 18:10:43] 2026-01-11 00:10:43,350 [wrapper] cleanup supervisor_pilot  921546 875854
[2026-01-10 18:10:43] 2026-01-11 00:10:43,353 [wrapper] Test setup, not cleaning
[2026-01-10 18:10:43] 2026-01-11 00:10:43,356 [wrapper] apfmon messages muted
[2026-01-10 18:10:43] 2026-01-11 00:10:43,359 [wrapper] ==== wrapper stdout END ====
[2026-01-10 18:10:43] 2026-01-11 00:10:43,362 [wrapper] ==== wrapper stderr END ====
[2026-01-10 18:10:43]  *** Error codes and diagnostics ***
[2026-01-10 18:10:43]     "exeErrorCode": 0,
[2026-01-10 18:10:43]     "exeErrorDiag": "",
[2026-01-10 18:10:43]     "pilotErrorCode": 0,
[2026-01-10 18:10:43]     "pilotErrorDiag": "",
[2026-01-10 18:10:43]  *** Listing of results directory ***
[2026-01-10 18:10:43] total 437232
[2026-01-10 18:10:43] -rwx------ 1 mark mark     36322 Jan  7 14:54 runpilot2-wrapper.sh
[2026-01-10 18:10:43] -rw-r--r-- 1 mark mark      5112 Jan  7 14:55 queuedata.json
[2026-01-10 18:10:43] -rw-r--r-- 1 mark mark    579449 Jan  7 14:55 pilot3.tar.gz
[2026-01-10 18:10:43] -rw-rw-r-- 1 mark mark       100 Jan 10 16:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 18:10:43] -rwxr-xr-x 1 mark mark      7986 Jan 10 16:50 run_atlas
[2026-01-10 18:10:43] -rw-rw-r-- 1 mark mark       105 Jan 10 16:50 job.xml
[2026-01-10 18:10:43] -rw-r--r-- 2 mark mark 223187333 Jan 10 16:50 EVNT.47898824._000287.pool.root.1
[2026-01-10 18:10:43] -rw-r--r-- 2 mark mark     15847 Jan 10 16:50 start_atlas.sh
[2026-01-10 18:10:43] drwxrwx--x 2 mark mark      4096 Jan 10 16:50 shared
[2026-01-10 18:10:43] -rw-r--r-- 2 mark mark    592390 Jan 10 16:50 input.tar.gz
[2026-01-10 18:10:43] -rw-rw-r-- 1 mark mark      9265 Jan 10 16:50 init_data.xml
[2026-01-10 18:10:43] -rw-rw-r-- 1 mark mark         0 Jan 10 16:50 boinc_setup_complete
[2026-01-10 18:10:43] -rw-rw-r-- 1 mark mark         0 Jan 10 16:50 boinc_lockfile
[2026-01-10 18:10:43] -rw-rw-r-- 1 mark mark      2516 Jan 10 16:50 pandaJob.out
[2026-01-10 18:10:43] -rw------- 1 mark mark    989548 Jan 10 16:50 agis_schedconf.cvmfs.json
[2026-01-10 18:10:43] -rw------- 1 mark mark   1516240 Jan 10 16:51 agis_ddmendpoints.agis.ALL.json
[2026-01-10 18:10:43] drwx------ 5 mark mark      4096 Jan 10 16:51 pilot3
[2026-01-10 18:10:43] -rw------- 1 mark mark 218469088 Jan 10 18:09 HITS.47898826._011473.pool.root.1
[2026-01-10 18:10:43] -rw-rw-r-- 1 mark mark       529 Jan 10 18:09 boinc_task_state.xml
[2026-01-10 18:10:43] -rw------- 1 mark mark      1031 Jan 10 18:09 memory_monitor_summary.json
[2026-01-10 18:10:43] -rw------- 1 mark mark    380550 Jan 10 18:09 log.47898826._011473.job.log.tgz.1
[2026-01-10 18:10:43] -rw------- 1 mark mark      7781 Jan 10 18:10 heartbeat.json
[2026-01-10 18:10:43] -rw-rw-r-- 1 mark mark        27 Jan 10 18:10 wrapper_checkpoint.txt
[2026-01-10 18:10:43] -rw-rw-r-- 1 mark mark      8192 Jan 10 18:10 boinc_mmap_file
[2026-01-10 18:10:43] -rw------- 1 mark mark       821 Jan 10 18:10 pilotlog.txt
[2026-01-10 18:10:43] -rw------- 1 mark mark        95 Jan 10 18:10 pilot_heartbeat.json
[2026-01-10 18:10:43] -rw------- 1 mark mark    697951 Jan 10 18:10 log.47898826._011473.job.log.1
[2026-01-10 18:10:43] -rw------- 1 mark mark       357 Jan 10 18:10 output.list
[2026-01-10 18:10:43] -rw-rw-r-- 1 mark mark       620 Jan 10 18:10 runtime_log
[2026-01-10 18:10:43] -rw------- 1 mark mark   1095680 Jan 10 18:10 result.tar.gz
[2026-01-10 18:10:43] -rw-rw-r-- 1 mark mark      8903 Jan 10 18:10 runtime_log.err
[2026-01-10 18:10:43] -rw------- 1 mark mark       645 Jan 10 18:10 K41NDmajpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtTdKDmCXU4Xn.diag
[2026-01-10 18:10:43] -rw-rw-r-- 1 mark mark     22608 Jan 10 18:10 stderr.txt
[2026-01-10 18:10:43] HITS file was successfully produced:
[2026-01-10 18:10:43] -rw------- 1 mark mark 218469088 Jan 10 18:09 shared/HITS.pool.root.1
[2026-01-10 18:10:43]  *** Contents of shared directory: ***
[2026-01-10 18:10:43] total 432984
[2026-01-10 18:10:43] -rw-r--r-- 2 mark mark 223187333 Jan 10 16:50 ATLAS.root_0
[2026-01-10 18:10:43] -rw-r--r-- 2 mark mark     15847 Jan 10 16:50 start_atlas.sh
[2026-01-10 18:10:43] -rw-r--r-- 2 mark mark    592390 Jan 10 16:50 input.tar.gz
[2026-01-10 18:10:43] -rw------- 1 mark mark 218469088 Jan 10 18:09 HITS.pool.root.1
[2026-01-10 18:10:43] -rw------- 1 mark mark   1095680 Jan 10 18:10 result.tar.gz
18:10:45 (871782): run_atlas exited; CPU time 49364.731067
18:10:45 (871782): called boinc_finish(0)

</stderr_txt>
]]>

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