Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
19:13:28 (957067): wrapper (7.7.26015): starting
19:13:28 (957067): wrapper: running run_atlas (--nthreads 12)
[2026-01-10 19:13:28] Arguments: --nthreads 12
[2026-01-10 19:13:28] Threads: 12
[2026-01-10 19:13:28] Checking for CVMFS
[2026-01-10 19:13:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 19:13:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 19:13:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 19:13:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 19:13:29] 2.13.3.0 328575 776 67140 154998 3 62 3930858 6144001 917 130560 3 1863025 99.956 154051 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-10 19:13:29] CVMFS is ok
[2026-01-10 19:13:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 19:13:29] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-10 19:13:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-10 19:13:29] Further information can be found at the LHC@home message board.
[2026-01-10 19:13:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 19:13:29] Checking for apptainer binary...
[2026-01-10 19:13:29] apptainer is not installed, using version from CVMFS
[2026-01-10 19:13:29] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 19:13:30] XeonFire
[2026-01-10 19:13:30] apptainer works
[2026-01-10 19:13:30] Set ATHENA_PROC_NUMBER=12
[2026-01-10 19:13:30] Set ATHENA_CORE_NUMBER=12
[2026-01-10 19:13:30] Starting ATLAS job with PandaID=6962314426
[2026-01-10 19:13:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/23 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 20:30:10]  *** The last 200 lines of the pilot log: ***
[2026-01-10 20:30:10]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/fb/log.47898826._011187.job.log.tgz.1
[2026-01-10 20:30:10]  workdir=None
[2026-01-10 20:30:10] ]
[2026-01-10 20:30:10] 2026-01-11 02:28:58,231 | INFO     | transferring file log.47898826._011187.job.log.tgz.1 from /var/lib/boinc-client/slots/23/PanDA_Pilot-6962314426/log.47898826._011187.job.log.tgz.1 to /var/lib/boin
[2026-01-10 20:30:10] 2026-01-11 02:28:58,232 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/23/PanDA_Pilot-6962314426/log.47898826._011187.job.log.tgz.1 /var/lib/boinc-client/slots/23/log.4789
[2026-01-10 20:30:10] 2026-01-11 02:28:58,272 | INFO     | adding to output.list: log.47898826._011187.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/3d/fb/log.47898826._011187.job.log.tg
[2026-01-10 20:30:10] 2026-01-11 02:28:58,273 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-10 20:30:10] 2026-01-11 02:28:58,273 | INFO     | summary of transferred files:
[2026-01-10 20:30:10] 2026-01-11 02:28:58,273 | INFO     |  -- lfn=log.47898826._011187.job.log.tgz.1, status_code=0, status=transferred
[2026-01-10 20:30:10] 2026-01-11 02:28:58,273 | INFO     | stage-out finished correctly
[2026-01-10 20:30:10] 2026-01-11 02:28:58,977 | INFO     | PID=961135 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 20:30:10] 2026-01-11 02:28:58,978 | INFO     | .. there are 2 such processes running
[2026-01-10 20:30:10] 2026-01-11 02:28:59,044 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-10 20:30:10] 2026-01-11 02:28:59,129 | INFO     | job 6962314426 has state=finished
[2026-01-10 20:30:10] 2026-01-11 02:28:59,129 | INFO     | preparing for final server update for job 6962314426 in state='finished'
[2026-01-10 20:30:10] 2026-01-11 02:28:59,130 | INFO     | this job has now completed (state=finished)
[2026-01-10 20:30:10] 2026-01-11 02:28:59,130 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-10 20:30:10] 2026-01-11 02:28:59,130 | INFO     | log transfer has been attempted: DONE
[2026-01-10 20:30:10] 2026-01-11 02:28:59,131 | INFO     | job 6962314426 has finished - writing final server update
[2026-01-10 20:30:10] 2026-01-11 02:28:59,131 | INFO     | total number of processed events: 400 (read)
[2026-01-10 20:30:10] 2026-01-11 02:28:59,132 | INFO     | executing command: lscpu
[2026-01-10 20:30:10] 2026-01-11 02:28:59,176 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-10 20:30:10] 2026-01-11 02:28:59,612 | WARNING  | process 968158 can no longer be monitored (due to stat problems) - aborting
[2026-01-10 20:30:10] 2026-01-11 02:28:59,612 | INFO     | using path: /var/lib/boinc-client/slots/23/PanDA_Pilot-6962314426/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 20:30:10] 2026-01-11 02:28:59,980 | INFO     | time since job start (4501s) is within the limit (174528.0s)
[2026-01-10 20:30:10] 2026-01-11 02:29:00,033 | INFO     | number of running child processes to parent process 968158: 1
[2026-01-10 20:30:10] 2026-01-11 02:29:00,033 | INFO     | maximum number of monitored processes: 6
[2026-01-10 20:30:10] 2026-01-11 02:29:01,986 | INFO     | time since job start (4503s) is within the limit (174528.0s)
[2026-01-10 20:30:10] 2026-01-11 02:29:02,537 | INFO     | monitor loop #331: job 0:6962314426 is in state 'finished'
[2026-01-10 20:30:10] 2026-01-11 02:29:02,537 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:30:10] 2026-01-11 02:29:03,991 | INFO     | time since job start (4505s) is within the limit (174528.0s)
[2026-01-10 20:30:10] 2026-01-11 02:29:05,041 | INFO     | monitor loop #332: job 0:6962314426 is in state 'finished'
[2026-01-10 20:30:10] 2026-01-11 02:29:05,041 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:30:10] 2026-01-11 02:29:05,996 | INFO     | time since job start (4507s) is within the limit (174528.0s)
[2026-01-10 20:30:10] 2026-01-11 02:29:07,546 | INFO     | monitor loop #333: job 0:6962314426 is in state 'finished'
[2026-01-10 20:30:10] 2026-01-11 02:29:07,546 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 20:30:10] 2026-01-11 02:29:08,001 | INFO     | time since job start (4510s) is within the limit (174528.0s)
[2026-01-10 20:30:10] 2026-01-11 02:29:09,092 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 20:30:10] 2026-01-11 02:29:09,107 | INFO     | found 44 cores (22 cores per socket, 2 sockets) HT, CPU MHz: 1838.1694431818178
[2026-01-10 20:30:10] 2026-01-11 02:29:09,122 | INFO     | using path: /var/lib/boinc-client/slots/23/PanDA_Pilot-6962314426/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 20:30:10] 2026-01-11 02:29:09,123 | INFO     | extracted standard info from prmon json
[2026-01-10 20:30:10] 2026-01-11 02:29:09,123 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 20:30:10] 2026-01-11 02:29:09,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 20:30:10] 2026-01-11 02:29:09,124 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 20:30:10] 2026-01-11 02:29:09,124 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 20:30:10] 2026-01-11 02:29:09,125 | INFO     | fitting pss+swap vs Time
[2026-01-10 20:30:10] 2026-01-11 02:29:09,126 | INFO     | sum of square deviations: 93240818.0
[2026-01-10 20:30:10] 2026-01-11 02:29:09,126 | INFO     | sum of deviations: 422102187.99999964
[2026-01-10 20:30:10] 2026-01-11 02:29:09,126 | INFO     | mean x: 1768096384.0
[2026-01-10 20:30:10] 2026-01-11 02:29:09,126 | INFO     | mean y: 2819274.3880597013
[2026-01-10 20:30:10] 2026-01-11 02:29:09,126 | INFO     | intersect: -8001372111.848895
[2026-01-10 20:30:10] 2026-01-11 02:29:09,127 | INFO     | chi2: 0.06326957045624881
[2026-01-10 20:30:10] 2026-01-11 02:29:09,127 | INFO     | current memory leak: 4.53 B/s (using 67 data points, chi2=0.06)
[2026-01-10 20:30:10] 2026-01-11 02:29:09,127 | INFO     | could have reported an average CPU frequency of 2249 MHz (6 samples)
[2026-01-10 20:30:10] 2026-01-11 02:29:09,127 | INFO     | ..............................
[2026-01-10 20:30:10] 2026-01-11 02:29:09,128 | INFO     | . Timing measurements:
[2026-01-10 20:30:10] 2026-01-11 02:29:09,128 | INFO     | . get job = 0 s
[2026-01-10 20:30:10] 2026-01-11 02:29:09,128 | INFO     | . initial setup = 16 s
[2026-01-10 20:30:10] 2026-01-11 02:29:09,128 | INFO     | . payload setup = 6 s
[2026-01-10 20:30:10] 2026-01-11 02:29:09,128 | INFO     | . stage-in = 0 s
[2026-01-10 20:30:10] 2026-01-11 02:29:09,128 | INFO     | . payload execution = 4473 s
[2026-01-10 20:30:10] 2026-01-11 02:29:09,128 | INFO     | . stage-out = 0 s
[2026-01-10 20:30:10] 2026-01-11 02:29:09,128 | INFO     | . log creation = 0 s
[2026-01-10 20:30:10] 2026-01-11 02:29:09,128 | INFO     | ..............................
[2026-01-10 20:30:10] 2026-01-11 02:29:09,229 | INFO     | 
[2026-01-10 20:30:10] 2026-01-11 02:29:09,229 | INFO     | job summary report
[2026-01-10 20:30:10] 2026-01-11 02:29:09,229 | INFO     | --------------------------------------------------
[2026-01-10 20:30:10] 2026-01-11 02:29:09,229 | INFO     | PanDA job id: 6962314426
[2026-01-10 20:30:10] 2026-01-11 02:29:09,229 | INFO     | task id: 47898826
[2026-01-10 20:30:10] 2026-01-11 02:29:09,229 | INFO     | errors: (none)
[2026-01-10 20:30:10] 2026-01-11 02:29:09,230 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 20:30:10] 2026-01-11 02:29:09,230 | INFO     | pilot state: finished 
[2026-01-10 20:30:10] 2026-01-11 02:29:09,230 | INFO     | transexitcode: 0
[2026-01-10 20:30:10] 2026-01-11 02:29:09,230 | INFO     | exeerrorcode: 0
[2026-01-10 20:30:10] 2026-01-11 02:29:09,230 | INFO     | exeerrordiag: 
[2026-01-10 20:30:10] 2026-01-11 02:29:09,230 | INFO     | exitcode: 0
[2026-01-10 20:30:10] 2026-01-11 02:29:09,230 | INFO     | exitmsg: OK
[2026-01-10 20:30:10] 2026-01-11 02:29:09,230 | INFO     | cpuconsumptiontime: 48931 s
[2026-01-10 20:30:10] 2026-01-11 02:29:09,230 | INFO     | nevents: 400
[2026-01-10 20:30:10] 2026-01-11 02:29:09,231 | INFO     | neventsw: 0
[2026-01-10 20:30:10] 2026-01-11 02:29:09,231 | INFO     | pid: 968158
[2026-01-10 20:30:10] 2026-01-11 02:29:09,231 | INFO     | pgrp: 968158
[2026-01-10 20:30:10] 2026-01-11 02:29:09,231 | INFO     | corecount: 12
[2026-01-10 20:30:10] 2026-01-11 02:29:09,231 | INFO     | event service: False
[2026-01-10 20:30:10] 2026-01-11 02:29:09,231 | INFO     | sizes: {0: 2283972, 5: 2284234, 11: 2284290, 4483: 2310282, 4484: 2319352, 4495: 2319490}
[2026-01-10 20:30:10] 2026-01-11 02:29:09,231 | INFO     | --------------------------------------------------
[2026-01-10 20:30:10] 2026-01-11 02:29:09,231 | INFO     | 
[2026-01-10 20:30:10] 2026-01-11 02:29:09,231 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/23
[2026-01-10 20:30:10] 2026-01-11 02:29:09,259 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,259 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,259 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,260 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,260 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,260 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,260 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,260 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,260 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,260 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,260 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,260 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,260 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,260 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,261 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,261 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,261 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,261 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 20:30:10] 2026-01-11 02:29:09,261 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,261 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 20:30:10] 2026-01-11 02:29:09,261 | INFO     | job 6962314426 has completed (purged errors)
[2026-01-10 20:30:10] 2026-01-11 02:29:09,261 | INFO     | overall cleanup function is called
[2026-01-10 20:30:10] 2026-01-11 02:29:10,270 | INFO     | --- collectZombieJob: --- 10, [968158]
[2026-01-10 20:30:10] 2026-01-11 02:29:10,270 | INFO     | zombie collector waiting for pid 968158
[2026-01-10 20:30:10] 2026-01-11 02:29:10,270 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 20:30:10] 2026-01-11 02:29:10,270 | INFO     | collected zombie processes
[2026-01-10 20:30:10] 2026-01-11 02:29:10,270 | INFO     | will attempt to kill all subprocesses of pid=968158
[2026-01-10 20:30:10] 2026-01-11 02:29:10,608 | INFO     | process IDs to be killed: [968158] (in reverse order)
[2026-01-10 20:30:10] 2026-01-11 02:29:10,722 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 20:30:10] 2026-01-11 02:29:10,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 20:30:10] 2026-01-11 02:29:10,739 | INFO     | did not find any defunct processes belonging to 968158
[2026-01-10 20:30:10] 2026-01-11 02:29:10,752 | INFO     | did not find any defunct processes belonging to 968158
[2026-01-10 20:30:10] 2026-01-11 02:29:10,752 | INFO     | ready for new job
[2026-01-10 20:30:10] 2026-01-11 02:29:10,752 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 20:30:10] 2026-01-11 02:29:10,755 | INFO     | ***************************************
[2026-01-10 20:30:10] 2026-01-11 02:29:10,755 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 20:30:10] 2026-01-11 02:29:10,755 | INFO     | ***************************************
[2026-01-10 20:30:10] 2026-01-11 02:29:10,755 | INFO     | 
[2026-01-10 20:30:10] 2026-01-11 02:29:10,761 | INFO     | architecture information:
[2026-01-10 20:30:10] 2026-01-11 02:29:10,761 | INFO     | executing command: cat /etc/os-release
[2026-01-10 20:30:10] 2026-01-11 02:29:10,775 | INFO     | cat /etc/os-release:
[2026-01-10 20:30:10] NAME="CentOS Linux"
[2026-01-10 20:30:10] VERSION="7 (Core)"
[2026-01-10 20:30:10] ID="centos"
[2026-01-10 20:30:10] ID_LIKE="rhel fedora"
[2026-01-10 20:30:10] VERSION_ID="7"
[2026-01-10 20:30:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 20:30:10] ANSI_COLOR="0;31"
[2026-01-10 20:30:10] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 20:30:10] HOME_URL="https://www.centos.org/"
[2026-01-10 20:30:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 20:30:10] 
[2026-01-10 20:30:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 20:30:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 20:30:10] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 20:30:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 20:30:10] 
[2026-01-10 20:30:10] 2026-01-11 02:29:10,775 | INFO     | ***************************************
[2026-01-10 20:30:10] 2026-01-11 02:29:11,279 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/23
[2026-01-10 20:30:10] 2026-01-11 02:29:11,294 | INFO     | sufficient remaining disk space (1805776846848 B)
[2026-01-10 20:30:10] 2026-01-11 02:29:11,295 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 20:30:10] 2026-01-11 02:29:11,295 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 20:30:10] 2026-01-11 02:29:11,295 | INFO     | update_server=False
[2026-01-10 20:30:10] 2026-01-11 02:29:11,295 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 20:30:10] 2026-01-11 02:29:11,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:30:10] 2026-01-11 02:29:11,296 | INFO     | aborting loop
[2026-01-10 20:30:10] 2026-01-11 02:29:11,372 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 20:30:10] 2026-01-11 02:29:11,791 | INFO     | all job control threads have been joined
[2026-01-10 20:30:10] 2026-01-11 02:29:12,198 | INFO     | all data control threads have been joined
[2026-01-10 20:30:10] 2026-01-11 02:29:12,300 | INFO     | [job] retrieve thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:12,301 | INFO     | [job] job monitor thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:12,661 | INFO     | [data] copytool_in thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:12,705 | INFO     | all payload control threads have been joined
[2026-01-10 20:30:10] 2026-01-11 02:29:12,793 | INFO     | [job] control thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:12,854 | INFO     | [payload] validate_post thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:13,007 | INFO     | [job] validate thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:13,204 | INFO     | [data] control thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:13,334 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:13,344 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:13,378 | INFO     | [data] copytool_out thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:13,379 | INFO     | [payload] failed_post thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:13,710 | INFO     | [payload] control thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:13,763 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:14,145 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 20:30:10] 2026-01-11 02:29:14,239 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 20:30:10] 2026-01-11 02:29:15,242 | INFO     | [job] queue monitor thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:18,150 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:22,269 | INFO     | job.realtimelogging is not enabled
[2026-01-10 20:30:10] 2026-01-11 02:29:23,274 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 20:30:10] 2026-01-11 02:29:41,455 | INFO     | PID=961135 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-10 20:30:10] 2026-01-11 02:29:41,456 | INFO     | .. there are 2 such processes running
[2026-01-10 20:30:10] 2026-01-11 02:29:41,457 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 20:30:10] 2026-01-11 02:29:41,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 20:30:10] 2026-01-11 02:29:41,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 20:30:10] 2026-01-11 02:30:04,413 | INFO     | [monitor] cgroup control has ended
[2026-01-10 20:30:10] 2026-01-11 02:30:04,576 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135730156914496)>', '<ExcThread(monitor, started 135729455806208)>']
[2026-01-10 20:30:10] 2026-01-11 02:30:05,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 20:30:10] 2026-01-11 02:30:05,559 | INFO     | [monitor] control thread has ended
[2026-01-10 20:30:10] 2026-01-11 02:30:09,601 | INFO     | all workflow threads have been joined
[2026-01-10 20:30:10] 2026-01-11 02:30:09,601 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 20:30:10] 2026-01-11 02:30:09,601 | INFO     | traces error code: 0
[2026-01-10 20:30:10] 2026-01-11 02:30:09,602 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 20:30:10] 2026-01-11 02:30:09,723 [wrapper] ==== pilot stdout END ====
[2026-01-10 20:30:10] 2026-01-11 02:30:09,726 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 20:30:10] 2026-01-11 02:30:09,729 [wrapper] pilotpid: 961135
[2026-01-10 20:30:10] 2026-01-11 02:30:09,732 [wrapper] Pilot exit status: 0
[2026-01-10 20:30:10] 2026-01-11 02:30:09,743 [wrapper] pandaids: 6962314426
[2026-01-10 20:30:10] 2026-01-11 02:30:09,813 [wrapper] cleanup supervisor_pilot 1004911 961136
[2026-01-10 20:30:10] 2026-01-11 02:30:09,816 [wrapper] Test setup, not cleaning
[2026-01-10 20:30:10] 2026-01-11 02:30:09,821 [wrapper] apfmon messages muted
[2026-01-10 20:30:10] 2026-01-11 02:30:09,824 [wrapper] ==== wrapper stdout END ====
[2026-01-10 20:30:10] 2026-01-11 02:30:09,827 [wrapper] ==== wrapper stderr END ====
[2026-01-10 20:30:10]  *** Error codes and diagnostics ***
[2026-01-10 20:30:10]     "exeErrorCode": 0,
[2026-01-10 20:30:10]     "exeErrorDiag": "",
[2026-01-10 20:30:10]     "pilotErrorCode": 0,
[2026-01-10 20:30:10]     "pilotErrorDiag": "",
[2026-01-10 20:30:10]  *** Listing of results directory ***
[2026-01-10 20:30:10] total 433564
[2026-01-10 20:30:10] -rw-r--r-- 1 mark mark    579449 Jan  7 14:49 pilot3.tar.gz
[2026-01-10 20:30:10] -rwx------ 1 mark mark     36322 Jan  7 14:54 runpilot2-wrapper.sh
[2026-01-10 20:30:10] -rw-r--r-- 1 mark mark      5112 Jan  7 14:55 queuedata.json
[2026-01-10 20:30:10] -rw-rw-r-- 1 mark mark       100 Jan 10 19:13 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 20:30:10] -rwxr-xr-x 1 mark mark      7986 Jan 10 19:13 run_atlas
[2026-01-10 20:30:10] -rw-rw-r-- 1 mark mark       105 Jan 10 19:13 job.xml
[2026-01-10 20:30:10] -rw-r--r-- 2 mark mark 223588402 Jan 10 19:13 EVNT.47898824._000275.pool.root.1
[2026-01-10 20:30:10] -rw-r--r-- 2 mark mark     15847 Jan 10 19:13 start_atlas.sh
[2026-01-10 20:30:10] drwxrwx--x 2 mark mark      4096 Jan 10 19:13 shared
[2026-01-10 20:30:10] -rw-r--r-- 2 mark mark    592394 Jan 10 19:13 input.tar.gz
[2026-01-10 20:30:10] -rw-rw-r-- 1 mark mark      9265 Jan 10 19:13 init_data.xml
[2026-01-10 20:30:10] -rw-rw-r-- 1 mark mark         0 Jan 10 19:13 boinc_setup_complete
[2026-01-10 20:30:10] -rw-rw-r-- 1 mark mark         0 Jan 10 19:13 boinc_lockfile
[2026-01-10 20:30:10] -rw-rw-r-- 1 mark mark      2516 Jan 10 19:13 pandaJob.out
[2026-01-10 20:30:10] -rw------- 1 mark mark    989540 Jan 10 19:13 agis_schedconf.cvmfs.json
[2026-01-10 20:30:10] -rw------- 1 mark mark   1516240 Jan 10 19:13 agis_ddmendpoints.agis.ALL.json
[2026-01-10 20:30:10] drwx------ 5 mark mark      4096 Jan 10 19:13 pilot3
[2026-01-10 20:30:10] -rw------- 1 mark mark 214333104 Jan 10 20:28 HITS.47898826._011187.pool.root.1
[2026-01-10 20:30:10] -rw-rw-r-- 1 mark mark       530 Jan 10 20:28 boinc_task_state.xml
[2026-01-10 20:30:10] -rw------- 1 mark mark      1028 Jan 10 20:28 memory_monitor_summary.json
[2026-01-10 20:30:10] -rw------- 1 mark mark    396288 Jan 10 20:28 log.47898826._011187.job.log.tgz.1
[2026-01-10 20:30:10] -rw------- 1 mark mark      7774 Jan 10 20:29 heartbeat.json
[2026-01-10 20:30:10] -rw------- 1 mark mark        95 Jan 10 20:29 pilot_heartbeat.json
[2026-01-10 20:30:10] -rw-rw-r-- 1 mark mark        27 Jan 10 20:30 wrapper_checkpoint.txt
[2026-01-10 20:30:10] -rw------- 1 mark mark      4904 Jan 10 20:30 pilotlog.txt
[2026-01-10 20:30:10] -rw------- 1 mark mark    666673 Jan 10 20:30 log.47898826._011187.job.log.1
[2026-01-10 20:30:10] -rw------- 1 mark mark       357 Jan 10 20:30 output.list
[2026-01-10 20:30:10] -rw-rw-r-- 1 mark mark       620 Jan 10 20:30 runtime_log
[2026-01-10 20:30:10] -rw------- 1 mark mark   1085440 Jan 10 20:30 result.tar.gz
[2026-01-10 20:30:10] -rw-rw-r-- 1 mark mark      8903 Jan 10 20:30 runtime_log.err
[2026-01-10 20:30:10] -rw------- 1 mark mark       645 Jan 10 20:30 q5dNDm3ipx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8YiKDmlF2qAn.diag
[2026-01-10 20:30:10] -rw-rw-r-- 1 mark mark      8192 Jan 10 20:30 boinc_mmap_file
[2026-01-10 20:30:10] -rw-rw-r-- 1 mark mark     22511 Jan 10 20:30 stderr.txt
[2026-01-10 20:30:10] HITS file was successfully produced:
[2026-01-10 20:30:10] -rw------- 1 mark mark 214333104 Jan 10 20:28 shared/HITS.pool.root.1
[2026-01-10 20:30:10]  *** Contents of shared directory: ***
[2026-01-10 20:30:10] total 429328
[2026-01-10 20:30:10] -rw-r--r-- 2 mark mark 223588402 Jan 10 19:13 ATLAS.root_0
[2026-01-10 20:30:10] -rw-r--r-- 2 mark mark     15847 Jan 10 19:13 start_atlas.sh
[2026-01-10 20:30:10] -rw-r--r-- 2 mark mark    592394 Jan 10 19:13 input.tar.gz
[2026-01-10 20:30:10] -rw------- 1 mark mark 214333104 Jan 10 20:28 HITS.pool.root.1
[2026-01-10 20:30:10] -rw------- 1 mark mark   1085440 Jan 10 20:30 result.tar.gz
20:30:11 (957067): run_atlas exited; CPU time 49096.134287
20:30:11 (957067): called boinc_finish(0)

</stderr_txt>
]]>

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