Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:40:37 (1108325): wrapper (7.7.26015): starting
02:40:37 (1108325): wrapper: running run_atlas (--nthreads 12)
[2026-01-11 02:40:37] Arguments: --nthreads 12
[2026-01-11 02:40:37] Threads: 12
[2026-01-11 02:40:37] Checking for CVMFS
[2026-01-11 02:40:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 02:40:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 02:40:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 02:40:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 02:40:38] 2.13.3.0 1088337 25 34892 155010 2 188 4006508 6144001 917 130560 0 55541 99.988 1351 558 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-11 02:40:38] CVMFS is ok
[2026-01-11 02:40:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 02:40:38] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-11 02:40:38] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-11 02:40:38] Further information can be found at the LHC@home message board.
[2026-01-11 02:40:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 02:40:38] Checking for apptainer binary...
[2026-01-11 02:40:38] apptainer is not installed, using version from CVMFS
[2026-01-11 02:40:38] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 02:40:40] XeonFire
[2026-01-11 02:40:40] apptainer works
[2026-01-11 02:40:40] Set ATHENA_PROC_NUMBER=12
[2026-01-11 02:40:40] Set ATHENA_CORE_NUMBER=12
[2026-01-11 02:40:40] Starting ATLAS job with PandaID=6962013119
[2026-01-11 02:40:40] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 03:58:24]  *** The last 200 lines of the pilot log: ***
[2026-01-11 03:58:24]  workdir=None
[2026-01-11 03:58:24] ]
[2026-01-11 03:58:24] 2026-01-11 09:57:39,491 | INFO     | transferring file log.47898826._008224.job.log.tgz.1 from /var/lib/boinc-client/slots/4/PanDA_Pilot-6962013119/log.47898826._008224.job.log.tgz.1 to /var/lib/boinc
[2026-01-11 03:58:24] 2026-01-11 09:57:39,491 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/4/PanDA_Pilot-6962013119/log.47898826._008224.job.log.tgz.1 /var/lib/boinc-client/slots/4/log.478988
[2026-01-11 03:58:24] 2026-01-11 09:57:39,512 | INFO     | adding to output.list: log.47898826._008224.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/88/40/log.47898826._008224.job.log.tg
[2026-01-11 03:58:24] 2026-01-11 09:57:39,512 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-11 03:58:24] 2026-01-11 09:57:39,512 | INFO     | summary of transferred files:
[2026-01-11 03:58:24] 2026-01-11 09:57:39,512 | INFO     |  -- lfn=log.47898826._008224.job.log.tgz.1, status_code=0, status=transferred
[2026-01-11 03:58:24] 2026-01-11 09:57:39,513 | INFO     | stage-out finished correctly
[2026-01-11 03:58:24] 2026-01-11 09:57:39,846 | INFO     | time since job start (4590s) is within the limit (174528.0s)
[2026-01-11 03:58:24] 2026-01-11 09:57:40,516 | INFO     | monitor loop #337: job 0:6962013119 is in state 'finished'
[2026-01-11 03:58:24] 2026-01-11 09:57:40,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:58:24] 2026-01-11 09:57:40,657 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-11 03:58:24] 2026-01-11 09:57:41,851 | INFO     | time since job start (4592s) is within the limit (174528.0s)
[2026-01-11 03:58:24] 2026-01-11 09:57:42,403 | INFO     | job 6962013119 has state=finished
[2026-01-11 03:58:24] 2026-01-11 09:57:42,403 | INFO     | preparing for final server update for job 6962013119 in state='finished'
[2026-01-11 03:58:24] 2026-01-11 09:57:42,829 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-11 03:58:24] 2026-01-11 09:57:42,830 | INFO     | this job has now completed (state=finished)
[2026-01-11 03:58:24] 2026-01-11 09:57:42,830 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-11 03:58:24] 2026-01-11 09:57:42,830 | INFO     | log transfer has been attempted: DONE
[2026-01-11 03:58:24] 2026-01-11 09:57:42,830 | INFO     | job 6962013119 has finished - writing final server update
[2026-01-11 03:58:24] 2026-01-11 09:57:42,830 | INFO     | total number of processed events: 400 (read)
[2026-01-11 03:58:24] 2026-01-11 09:57:42,832 | INFO     | executing command: lscpu
[2026-01-11 03:58:24] 2026-01-11 09:57:42,893 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-11 03:58:24] 2026-01-11 09:57:43,019 | INFO     | monitor loop #338: job 0:6962013119 is in state 'finished'
[2026-01-11 03:58:24] 2026-01-11 09:57:43,019 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:58:24] 2026-01-11 09:57:43,861 | INFO     | time since job start (4594s) is within the limit (174528.0s)
[2026-01-11 03:58:24] 2026-01-11 09:57:45,394 | INFO     | PID=1112698 has CPU usage=10.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-11 03:58:24] 2026-01-11 09:57:45,394 | INFO     | .. there are 3 such processes running
[2026-01-11 03:58:24] 2026-01-11 09:57:45,522 | INFO     | monitor loop #339: job 0:6962013119 is in state 'finished'
[2026-01-11 03:58:24] 2026-01-11 09:57:45,522 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:58:24] 2026-01-11 09:57:46,394 | INFO     | time since job start (4597s) is within the limit (174528.0s)
[2026-01-11 03:58:24] 2026-01-11 09:57:48,025 | INFO     | monitor loop #340: job 0:6962013119 is in state 'finished'
[2026-01-11 03:58:24] 2026-01-11 09:57:48,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:58:24] 2026-01-11 09:57:48,400 | INFO     | time since job start (4599s) is within the limit (174528.0s)
[2026-01-11 03:58:24] 2026-01-11 09:57:50,406 | INFO     | time since job start (4601s) is within the limit (174528.0s)
[2026-01-11 03:58:24] 2026-01-11 09:57:50,528 | INFO     | monitor loop #341: job 0:6962013119 is in state 'finished'
[2026-01-11 03:58:24] 2026-01-11 09:57:50,528 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-11 03:58:24] 2026-01-11 09:57:51,042 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-11 03:58:24] 2026-01-11 09:57:51,055 | INFO     | found 44 cores (22 cores per socket, 2 sockets) HT, CPU MHz: 2709.3962613636363
[2026-01-11 03:58:24] 2026-01-11 09:57:51,070 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6962013119/memory_monitor_summary.json (trf name=prmon)
[2026-01-11 03:58:24] 2026-01-11 09:57:51,071 | INFO     | extracted standard info from prmon json
[2026-01-11 03:58:24] 2026-01-11 09:57:51,071 | INFO     | extracted standard memory fields from prmon json
[2026-01-11 03:58:24] 2026-01-11 09:57:51,071 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-11 03:58:24] 2026-01-11 09:57:51,071 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-11 03:58:24] 2026-01-11 09:57:51,071 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-11 03:58:24] 2026-01-11 09:57:51,073 | INFO     | fitting pss+swap vs Time
[2026-01-11 03:58:24] 2026-01-11 09:57:51,073 | INFO     | sum of square deviations: 97479037.0
[2026-01-11 03:58:24] 2026-01-11 09:57:51,074 | INFO     | sum of deviations: -4344669002.0
[2026-01-11 03:58:24] 2026-01-11 09:57:51,074 | INFO     | mean x: 1768123248.5
[2026-01-11 03:58:24] 2026-01-11 09:57:51,074 | INFO     | mean y: 2750902.529411765
[2026-01-11 03:58:24] 2026-01-11 09:57:51,074 | INFO     | intersect: 78808517823.20071
[2026-01-11 03:58:24] 2026-01-11 09:57:51,074 | INFO     | chi2: 0.010295864616502972
[2026-01-11 03:58:24] 2026-01-11 09:57:51,074 | INFO     | current memory leak: -44.57 B/s (using 68 data points, chi2=0.01)
[2026-01-11 03:58:24] 2026-01-11 09:57:51,075 | INFO     | could have reported an average CPU frequency of 2444 MHz (6 samples)
[2026-01-11 03:58:24] 2026-01-11 09:57:51,075 | INFO     | ..............................
[2026-01-11 03:58:24] 2026-01-11 09:57:51,075 | INFO     | . Timing measurements:
[2026-01-11 03:58:24] 2026-01-11 09:57:51,075 | INFO     | . get job = 0 s
[2026-01-11 03:58:24] 2026-01-11 09:57:51,075 | INFO     | . initial setup = 13 s
[2026-01-11 03:58:24] 2026-01-11 09:57:51,075 | INFO     | . payload setup = 7 s
[2026-01-11 03:58:24] 2026-01-11 09:57:51,075 | INFO     | . stage-in = 0 s
[2026-01-11 03:58:24] 2026-01-11 09:57:51,076 | INFO     | . payload execution = 4560 s
[2026-01-11 03:58:24] 2026-01-11 09:57:51,076 | INFO     | . stage-out = 0 s
[2026-01-11 03:58:24] 2026-01-11 09:57:51,076 | INFO     | . log creation = 0 s
[2026-01-11 03:58:24] 2026-01-11 09:57:51,076 | INFO     | ..............................
[2026-01-11 03:58:24] 2026-01-11 09:57:51,170 | INFO     | 
[2026-01-11 03:58:24] 2026-01-11 09:57:51,170 | INFO     | job summary report
[2026-01-11 03:58:24] 2026-01-11 09:57:51,170 | INFO     | --------------------------------------------------
[2026-01-11 03:58:24] 2026-01-11 09:57:51,170 | INFO     | PanDA job id: 6962013119
[2026-01-11 03:58:24] 2026-01-11 09:57:51,170 | INFO     | task id: 47898826
[2026-01-11 03:58:24] 2026-01-11 09:57:51,171 | INFO     | errors: (none)
[2026-01-11 03:58:24] 2026-01-11 09:57:51,171 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-11 03:58:24] 2026-01-11 09:57:51,171 | INFO     | pilot state: finished 
[2026-01-11 03:58:24] 2026-01-11 09:57:51,171 | INFO     | transexitcode: 0
[2026-01-11 03:58:24] 2026-01-11 09:57:51,171 | INFO     | exeerrorcode: 0
[2026-01-11 03:58:24] 2026-01-11 09:57:51,171 | INFO     | exeerrordiag: 
[2026-01-11 03:58:24] 2026-01-11 09:57:51,171 | INFO     | exitcode: 0
[2026-01-11 03:58:24] 2026-01-11 09:57:51,171 | INFO     | exitmsg: OK
[2026-01-11 03:58:24] 2026-01-11 09:57:51,171 | INFO     | cpuconsumptiontime: 50746 s
[2026-01-11 03:58:24] 2026-01-11 09:57:51,171 | INFO     | nevents: 400
[2026-01-11 03:58:24] 2026-01-11 09:57:51,171 | INFO     | neventsw: 0
[2026-01-11 03:58:24] 2026-01-11 09:57:51,171 | INFO     | pid: 1119703
[2026-01-11 03:58:24] 2026-01-11 09:57:51,171 | INFO     | pgrp: 1119703
[2026-01-11 03:58:24] 2026-01-11 09:57:51,172 | INFO     | corecount: 12
[2026-01-11 03:58:24] 2026-01-11 09:57:51,172 | INFO     | event service: False
[2026-01-11 03:58:24] 2026-01-11 09:57:51,172 | INFO     | sizes: {0: 2283800, 1: 2283999, 6: 2284261, 11: 2284289, 4571: 2310458, 4572: 2310457, 4573: 2319653, 4574: 2319709, 4584: 2319903}
[2026-01-11 03:58:24] 2026-01-11 09:57:51,172 | INFO     | --------------------------------------------------
[2026-01-11 03:58:24] 2026-01-11 09:57:51,172 | INFO     | 
[2026-01-11 03:58:24] 2026-01-11 09:57:51,172 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2026-01-11 03:58:24] 2026-01-11 09:57:51,196 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,196 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,196 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,196 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,196 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,196 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,196 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,196 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,196 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,197 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,197 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,197 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,197 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,197 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,197 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,197 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,197 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,197 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-11 03:58:24] 2026-01-11 09:57:51,197 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,197 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-11 03:58:24] 2026-01-11 09:57:51,197 | INFO     | job 6962013119 has completed (purged errors)
[2026-01-11 03:58:24] 2026-01-11 09:57:51,197 | INFO     | overall cleanup function is called
[2026-01-11 03:58:24] 2026-01-11 09:57:52,205 | INFO     | --- collectZombieJob: --- 10, [1119703]
[2026-01-11 03:58:24] 2026-01-11 09:57:52,205 | INFO     | zombie collector waiting for pid 1119703
[2026-01-11 03:58:24] 2026-01-11 09:57:52,205 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-11 03:58:24] 2026-01-11 09:57:52,205 | INFO     | collected zombie processes
[2026-01-11 03:58:24] 2026-01-11 09:57:52,205 | INFO     | will attempt to kill all subprocesses of pid=1119703
[2026-01-11 03:58:24] 2026-01-11 09:57:52,578 | INFO     | process IDs to be killed: [1119703] (in reverse order)
[2026-01-11 03:58:24] 2026-01-11 09:57:52,762 | WARNING  | found no corresponding commands to process id(s)
[2026-01-11 03:58:24] 2026-01-11 09:57:52,763 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-11 03:58:24] 2026-01-11 09:57:52,774 | INFO     | did not find any defunct processes belonging to 1119703
[2026-01-11 03:58:24] 2026-01-11 09:57:52,785 | INFO     | did not find any defunct processes belonging to 1119703
[2026-01-11 03:58:24] 2026-01-11 09:57:52,785 | INFO     | ready for new job
[2026-01-11 03:58:24] 2026-01-11 09:57:52,785 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-11 03:58:24] 2026-01-11 09:57:52,787 | INFO     | ***************************************
[2026-01-11 03:58:24] 2026-01-11 09:57:52,787 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-11 03:58:24] 2026-01-11 09:57:52,788 | INFO     | ***************************************
[2026-01-11 03:58:24] 2026-01-11 09:57:52,788 | INFO     | 
[2026-01-11 03:58:24] 2026-01-11 09:57:52,794 | INFO     | architecture information:
[2026-01-11 03:58:24] 2026-01-11 09:57:52,794 | INFO     | executing command: cat /etc/os-release
[2026-01-11 03:58:24] 2026-01-11 09:57:52,818 | INFO     | cat /etc/os-release:
[2026-01-11 03:58:24] NAME="CentOS Linux"
[2026-01-11 03:58:24] VERSION="7 (Core)"
[2026-01-11 03:58:24] ID="centos"
[2026-01-11 03:58:24] ID_LIKE="rhel fedora"
[2026-01-11 03:58:24] VERSION_ID="7"
[2026-01-11 03:58:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-11 03:58:24] ANSI_COLOR="0;31"
[2026-01-11 03:58:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-11 03:58:24] HOME_URL="https://www.centos.org/"
[2026-01-11 03:58:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-11 03:58:24] 
[2026-01-11 03:58:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-11 03:58:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-11 03:58:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-11 03:58:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-11 03:58:24] 
[2026-01-11 03:58:24] 2026-01-11 09:57:52,818 | INFO     | ***************************************
[2026-01-11 03:58:24] 2026-01-11 09:57:53,322 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2026-01-11 03:58:24] 2026-01-11 09:57:53,337 | INFO     | sufficient remaining disk space (1801983098880 B)
[2026-01-11 03:58:24] 2026-01-11 09:57:53,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-11 03:58:24] 2026-01-11 09:57:53,337 | INFO     | current server update state: UPDATING_FINAL
[2026-01-11 03:58:24] 2026-01-11 09:57:53,337 | INFO     | update_server=False
[2026-01-11 03:58:24] 2026-01-11 09:57:53,338 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-11 03:58:24] 2026-01-11 09:57:53,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-11 03:58:24] 2026-01-11 09:57:53,850 | INFO     | all payload control threads have been joined
[2026-01-11 03:58:24] 2026-01-11 09:57:53,889 | INFO     | all data control threads have been joined
[2026-01-11 03:58:24] 2026-01-11 09:57:54,036 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-11 03:58:24] 2026-01-11 09:57:54,036 | INFO     | aborting loop
[2026-01-11 03:58:24] 2026-01-11 09:57:54,343 | INFO     | [job] retrieve thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:57:54,356 | INFO     | all job control threads have been joined
[2026-01-11 03:58:24] 2026-01-11 09:57:54,856 | INFO     | [payload] control thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:57:54,874 | INFO     | [data] copytool_in thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:57:54,894 | INFO     | [data] control thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:57:54,961 | INFO     | [job] validate thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:57:55,041 | INFO     | [job] job monitor thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:57:55,113 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:57:55,147 | INFO     | [payload] failed_post thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:57:55,203 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:57:55,344 | INFO     | [data] copytool_out thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:57:55,362 | INFO     | [job] control thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:57:55,374 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:57:55,528 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:57:55,718 | INFO     | [payload] validate_post thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:57:55,784 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 03:58:24] 2026-01-11 09:57:56,178 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-11 03:58:24] 2026-01-11 09:57:57,180 | INFO     | [job] queue monitor thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:57:59,790 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 03:58:24] 2026-01-11 09:58:16,040 | INFO     | [monitor] cgroup control has ended
[2026-01-11 03:58:24] 2026-01-11 09:58:17,637 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136161102915392)>', '<ExcThread(monitor, started 136160563148544)>']
[2026-01-11 03:58:24] 2026-01-11 09:58:22,662 | INFO     | all workflow threads have been joined
[2026-01-11 03:58:24] 2026-01-11 09:58:22,662 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 03:58:24] 2026-01-11 09:58:22,662 | INFO     | traces error code: 0
[2026-01-11 03:58:24] 2026-01-11 09:58:22,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 03:58:24] 2026-01-11 09:58:23,947 | INFO     | PID=1112698 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 03:58:24] 2026-01-11 09:58:23,948 | INFO     | .. there are 3 such processes running
[2026-01-11 03:58:24] 2026-01-11 09:58:23,948 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 03:58:24] 2026-01-11 09:58:23,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 03:58:24] 2026-01-11 09:58:23,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 03:58:24] 2026-01-11 09:58:23,948 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 03:58:24] 2026-01-11 09:58:23,948 | INFO     | [monitor] control thread has ended
[2026-01-11 03:58:24] 2026-01-11 09:58:24,052 [wrapper] ==== pilot stdout END ====
[2026-01-11 03:58:24] 2026-01-11 09:58:24,056 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 03:58:24] 2026-01-11 09:58:24,060 [wrapper] pilotpid: 1112698
[2026-01-11 03:58:24] 2026-01-11 09:58:24,063 [wrapper] Pilot exit status: 0
[2026-01-11 03:58:24] 2026-01-11 09:58:24,073 [wrapper] pandaids: 6962013119
[2026-01-11 03:58:24] 2026-01-11 09:58:24,130 [wrapper] cleanup supervisor_pilot 1210434 1112699
[2026-01-11 03:58:24] 2026-01-11 09:58:24,134 [wrapper] Test setup, not cleaning
[2026-01-11 03:58:24] 2026-01-11 09:58:24,138 [wrapper] apfmon messages muted
[2026-01-11 03:58:24] 2026-01-11 09:58:24,141 [wrapper] ==== wrapper stdout END ====
[2026-01-11 03:58:24] 2026-01-11 09:58:24,144 [wrapper] ==== wrapper stderr END ====
[2026-01-11 03:58:24]  *** Error codes and diagnostics ***
[2026-01-11 03:58:24]     "exeErrorCode": 0,
[2026-01-11 03:58:24]     "exeErrorDiag": "",
[2026-01-11 03:58:24]     "pilotErrorCode": 0,
[2026-01-11 03:58:24]     "pilotErrorDiag": "",
[2026-01-11 03:58:24]  *** Listing of results directory ***
[2026-01-11 03:58:24] total 443852
[2026-01-11 03:58:24] -rw-r--r-- 1 mark mark    579449 Jan  7 09:25 pilot3.tar.gz
[2026-01-11 03:58:24] -rwx------ 1 mark mark     36322 Jan  7 09:30 runpilot2-wrapper.sh
[2026-01-11 03:58:24] -rw-r--r-- 1 mark mark      5112 Jan  7 09:31 queuedata.json
[2026-01-11 03:58:24] -rw-rw-r-- 1 mark mark       100 Jan 11 02:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 03:58:24] -rwxr-xr-x 1 mark mark      7986 Jan 11 02:40 run_atlas
[2026-01-11 03:58:24] -rw-rw-r-- 1 mark mark       105 Jan 11 02:40 job.xml
[2026-01-11 03:58:24] -rw-r--r-- 2 mark mark 226590167 Jan 11 02:40 EVNT.47898824._000209.pool.root.1
[2026-01-11 03:58:24] -rw-r--r-- 2 mark mark     15847 Jan 11 02:40 start_atlas.sh
[2026-01-11 03:58:24] drwxrwx--x 2 mark mark      4096 Jan 11 02:40 shared
[2026-01-11 03:58:24] -rw-r--r-- 2 mark mark    592391 Jan 11 02:40 input.tar.gz
[2026-01-11 03:58:24] -rw-rw-r-- 1 mark mark      9264 Jan 11 02:40 init_data.xml
[2026-01-11 03:58:24] -rw-rw-r-- 1 mark mark         0 Jan 11 02:40 boinc_setup_complete
[2026-01-11 03:58:24] -rw-rw-r-- 1 mark mark         0 Jan 11 02:40 boinc_lockfile
[2026-01-11 03:58:24] -rw-rw-r-- 1 mark mark      2516 Jan 11 02:40 pandaJob.out
[2026-01-11 03:58:24] -rw------- 1 mark mark    989548 Jan 11 02:40 agis_schedconf.cvmfs.json
[2026-01-11 03:58:24] -rw------- 1 mark mark   1516240 Jan 11 02:41 agis_ddmendpoints.agis.ALL.json
[2026-01-11 03:58:24] drwx------ 5 mark mark      4096 Jan 11 02:41 pilot3
[2026-01-11 03:58:24] -rw------- 1 mark mark 221848663 Jan 11 03:57 HITS.47898826._008224.pool.root.1
[2026-01-11 03:58:24] -rw-rw-r-- 1 mark mark       529 Jan 11 03:57 boinc_task_state.xml
[2026-01-11 03:58:24] -rw------- 1 mark mark      1035 Jan 11 03:57 memory_monitor_summary.json
[2026-01-11 03:58:24] -rw------- 1 mark mark    395589 Jan 11 03:57 log.47898826._008224.job.log.tgz.1
[2026-01-11 03:58:24] -rw------- 1 mark mark        95 Jan 11 03:57 pilot_heartbeat.json
[2026-01-11 03:58:24] -rw------- 1 mark mark      7789 Jan 11 03:57 heartbeat.json
[2026-01-11 03:58:24] -rw-rw-r-- 1 mark mark      8192 Jan 11 03:58 boinc_mmap_file
[2026-01-11 03:58:24] -rw-rw-r-- 1 mark mark        27 Jan 11 03:58 wrapper_checkpoint.txt
[2026-01-11 03:58:24] -rw------- 1 mark mark       822 Jan 11 03:58 pilotlog.txt
[2026-01-11 03:58:24] -rw------- 1 mark mark    678241 Jan 11 03:58 log.47898826._008224.job.log.1
[2026-01-11 03:58:24] -rw------- 1 mark mark       357 Jan 11 03:58 output.list
[2026-01-11 03:58:24] -rw-rw-r-- 1 mark mark       620 Jan 11 03:58 runtime_log
[2026-01-11 03:58:24] -rw------- 1 mark mark   1095680 Jan 11 03:58 result.tar.gz
[2026-01-11 03:58:24] -rw------- 1 mark mark       644 Jan 11 03:58 VMBMDmzfkx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCAiKDmwYrqEo.diag
[2026-01-11 03:58:24] -rw-rw-r-- 1 mark mark      8887 Jan 11 03:58 runtime_log.err
[2026-01-11 03:58:24] -rw-rw-r-- 1 mark mark     22554 Jan 11 03:58 stderr.txt
[2026-01-11 03:58:24] HITS file was successfully produced:
[2026-01-11 03:58:24] -rw------- 1 mark mark 221848663 Jan 11 03:57 shared/HITS.pool.root.1
[2026-01-11 03:58:24]  *** Contents of shared directory: ***
[2026-01-11 03:58:24] total 439608
[2026-01-11 03:58:24] -rw-r--r-- 2 mark mark 226590167 Jan 11 02:40 ATLAS.root_0
[2026-01-11 03:58:24] -rw-r--r-- 2 mark mark     15847 Jan 11 02:40 start_atlas.sh
[2026-01-11 03:58:24] -rw-r--r-- 2 mark mark    592391 Jan 11 02:40 input.tar.gz
[2026-01-11 03:58:24] -rw------- 1 mark mark 221848663 Jan 11 03:57 HITS.pool.root.1
[2026-01-11 03:58:24] -rw------- 1 mark mark   1095680 Jan 11 03:58 result.tar.gz
03:58:27 (1108325): run_atlas exited; CPU time 50912.465965
03:58:27 (1108325): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN