Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:58:07 (1517666): wrapper (7.7.26015): starting
19:58:07 (1517666): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:58:07] Arguments: --nthreads 8
[2026-01-09 19:58:07] Threads: 8
[2026-01-09 19:58:07] Checking for CVMFS
[2026-01-09 19:58:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:58:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:58:07] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:58:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:58:08] 2.13.3.0 6557 23620 225880 154962 0 736 33403533 40960001 22900 16776704 0 56949074 99.656 54656090 42887 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 19:58:08] CVMFS is ok
[2026-01-09 19:58:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:58:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:58:08] Further information can be found at the LHC@home message board.
[2026-01-09 19:58:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:58:08] Checking for apptainer binary...
[2026-01-09 19:58:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:58:08] Running /usr/bin/apptainer --version
[2026-01-09 19:58:08] apptainer version 1.4.5-2.el9
[2026-01-09 19:58:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:58:08] c-212-20.aglt2.org
[2026-01-09 19:58:08] apptainer works
[2026-01-09 19:58:08] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:58:08] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:58:08] Starting ATLAS job with PandaID=6962015720
[2026-01-09 19:58:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:58:47]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:58:47] 2026-01-10 02:57:47,794 | INFO     | time since job start (7159s) is within the limit (174528.0s)
[2026-01-09 21:58:47] 2026-01-10 02:57:49,610 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 21:58:47] 2026-01-10 02:57:49,624 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3281.0027916666677
[2026-01-09 21:58:47] 2026-01-10 02:57:49,637 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962015720/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:58:47] 2026-01-10 02:57:49,638 | INFO     | extracted standard info from prmon json
[2026-01-09 21:58:47] 2026-01-10 02:57:49,638 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:58:47] 2026-01-10 02:57:49,638 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:58:47] 2026-01-10 02:57:49,638 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:58:47] 2026-01-10 02:57:49,638 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:58:47] 2026-01-10 02:57:49,640 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:58:47] 2026-01-10 02:57:49,643 | INFO     | sum of square deviations: 496591728.99145323
[2026-01-09 21:58:47] 2026-01-10 02:57:49,644 | INFO     | sum of deviations: 2980913634.3675222
[2026-01-09 21:58:47] 2026-01-10 02:57:49,644 | INFO     | mean x: 1768010288.008547
[2026-01-09 21:58:47] 2026-01-10 02:57:49,644 | INFO     | mean y: 2483626.6324786325
[2026-01-09 21:58:47] 2026-01-10 02:57:49,644 | INFO     | intersect: -10610431703.089886
[2026-01-09 21:58:47] 2026-01-10 02:57:49,644 | INFO     | chi2: 2.1817875416385744
[2026-01-09 21:58:47] 2026-01-10 02:57:49,645 | INFO     | sum of square deviations: 435604843.99107105
[2026-01-09 21:58:47] 2026-01-10 02:57:49,645 | INFO     | sum of deviations: 10246918201.714283
[2026-01-09 21:58:47] 2026-01-10 02:57:49,645 | INFO     | mean x: 1768010135.5089285
[2026-01-09 21:58:47] 2026-01-10 02:57:49,645 | INFO     | mean y: 2501135.285714286
[2026-01-09 21:58:47] 2026-01-10 02:57:49,645 | INFO     | intersect: -41587154003.47378
[2026-01-09 21:58:47] 2026-01-10 02:57:49,646 | INFO     | chi2: 1.4454478574912446
[2026-01-09 21:58:47] 2026-01-10 02:57:49,646 | INFO     | current chi2=1.4454478574912446 (change=33.74937614660322 %)
[2026-01-09 21:58:47] 2026-01-10 02:57:49,646 | INFO     | sum of square deviations: 379827358.9906545
[2026-01-09 21:58:47] 2026-01-10 02:57:49,646 | INFO     | sum of deviations: 9730961239.317759
[2026-01-09 21:58:47] 2026-01-10 02:57:49,646 | INFO     | mean x: 1768009983.0093458
[2026-01-09 21:58:47] 2026-01-10 02:57:49,646 | INFO     | mean y: 2499723.6822429905
[2026-01-09 21:58:47] 2026-01-10 02:57:49,646 | INFO     | intersect: -45292912015.77094
[2026-01-09 21:58:47] 2026-01-10 02:57:49,647 | INFO     | chi2: 1.448342708364831
[2026-01-09 21:58:47] 2026-01-10 02:57:49,647 | INFO     | current chi2=1.448342708364831 (change=-0.2002736285908511 %)
[2026-01-09 21:58:47] 2026-01-10 02:57:49,647 | INFO     | right removable region: 106
[2026-01-09 21:58:47] 2026-01-10 02:57:49,647 | INFO     | sum of square deviations: 435604233.99107105
[2026-01-09 21:58:47] 2026-01-10 02:57:49,647 | INFO     | sum of deviations: -12711957330.607145
[2026-01-09 21:58:47] 2026-01-10 02:57:49,647 | INFO     | mean x: 1768010440.5089285
[2026-01-09 21:58:47] 2026-01-10 02:57:49,648 | INFO     | mean y: 2521980.6071428573
[2026-01-09 21:58:47] 2026-01-10 02:57:49,648 | INFO     | intersect: 51597230034.51951
[2026-01-09 21:58:47] 2026-01-10 02:57:49,648 | INFO     | chi2: 0.836458704252704
[2026-01-09 21:58:47] 2026-01-10 02:57:49,648 | INFO     | current chi2=0.836458704252704 (change=61.661770988732314 %)
[2026-01-09 21:58:47] 2026-01-10 02:57:49,648 | INFO     | sum of square deviations: 379826138.9906545
[2026-01-09 21:58:47] 2026-01-10 02:57:49,648 | INFO     | sum of deviations: -10879865464.897198
[2026-01-09 21:58:47] 2026-01-10 02:57:49,648 | INFO     | mean x: 1768010593.0093458
[2026-01-09 21:58:47] 2026-01-10 02:57:49,649 | INFO     | mean y: 2516863.8971962617
[2026-01-09 21:58:47] 2026-01-10 02:57:49,649 | INFO     | intersect: 50645996650.65321
[2026-01-09 21:58:47] 2026-01-10 02:57:49,649 | INFO     | chi2: 0.8255230981482499
[2026-01-09 21:58:47] 2026-01-10 02:57:49,649 | INFO     | current chi2=0.8255230981482499 (change=1.3073695149390572 %)
[2026-01-09 21:58:47] 2026-01-10 02:57:49,649 | INFO     | left removable region: 20
[2026-01-09 21:58:47] 2026-01-10 02:57:49,649 | INFO     | sum of square deviations: 197203697.5
[2026-01-09 21:58:47] 2026-01-10 02:57:49,649 | INFO     | sum of deviations: 1533847836.5000002
[2026-01-09 21:58:47] 2026-01-10 02:57:49,649 | INFO     | mean x: 1768010562.5
[2026-01-09 21:58:47] 2026-01-10 02:57:49,650 | INFO     | mean y: 2518070.8488372094
[2026-01-09 21:58:47] 2026-01-10 02:57:49,650 | INFO     | intersect: -13749045467.65821
[2026-01-09 21:58:47] 2026-01-10 02:57:49,650 | INFO     | chi2: 0.0006728390161238243
[2026-01-09 21:58:47] 2026-01-10 02:57:49,650 | INFO     | current memory leak: 7.78 B/s (using 86 data points, chi2=0.00)
[2026-01-09 21:58:47] 2026-01-10 02:57:49,650 | INFO     | could have reported an average CPU frequency of 3345 MHz (7 samples)
[2026-01-09 21:58:47] 2026-01-10 02:57:49,650 | INFO     | ..............................
[2026-01-09 21:58:47] 2026-01-10 02:57:49,651 | INFO     | . Timing measurements:
[2026-01-09 21:58:47] 2026-01-10 02:57:49,651 | INFO     | . get job = 0 s
[2026-01-09 21:58:47] 2026-01-10 02:57:49,651 | INFO     | . initial setup = 3 s
[2026-01-09 21:58:47] 2026-01-10 02:57:49,651 | INFO     | . payload setup = 13 s
[2026-01-09 21:58:47] 2026-01-10 02:57:49,651 | INFO     | . stage-in = 0 s
[2026-01-09 21:58:47] 2026-01-10 02:57:49,651 | INFO     | . payload execution = 7107 s
[2026-01-09 21:58:47] 2026-01-10 02:57:49,651 | INFO     | . stage-out = 1 s
[2026-01-09 21:58:47] 2026-01-10 02:57:49,651 | INFO     | . log creation = 0 s
[2026-01-09 21:58:47] 2026-01-10 02:57:49,651 | INFO     | ..............................
[2026-01-09 21:58:47] 2026-01-10 02:57:49,726 | INFO     | 
[2026-01-09 21:58:47] 2026-01-10 02:57:49,726 | INFO     | job summary report
[2026-01-09 21:58:47] 2026-01-10 02:57:49,726 | INFO     | --------------------------------------------------
[2026-01-09 21:58:47] 2026-01-10 02:57:49,726 | INFO     | PanDA job id: 6962015720
[2026-01-09 21:58:47] 2026-01-10 02:57:49,726 | INFO     | task id: 47898826
[2026-01-09 21:58:47] 2026-01-10 02:57:49,726 | INFO     | errors: (none)
[2026-01-09 21:58:47] 2026-01-10 02:57:49,726 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:58:47] 2026-01-10 02:57:49,726 | INFO     | pilot state: finished 
[2026-01-09 21:58:47] 2026-01-10 02:57:49,726 | INFO     | transexitcode: 0
[2026-01-09 21:58:47] 2026-01-10 02:57:49,726 | INFO     | exeerrorcode: 0
[2026-01-09 21:58:47] 2026-01-10 02:57:49,727 | INFO     | exeerrordiag: 
[2026-01-09 21:58:47] 2026-01-10 02:57:49,727 | INFO     | exitcode: 0
[2026-01-09 21:58:47] 2026-01-10 02:57:49,727 | INFO     | exitmsg: OK
[2026-01-09 21:58:47] 2026-01-10 02:57:49,727 | INFO     | cpuconsumptiontime: 43182 s
[2026-01-09 21:58:47] 2026-01-10 02:57:49,727 | INFO     | nevents: 400
[2026-01-09 21:58:47] 2026-01-10 02:57:49,727 | INFO     | neventsw: 0
[2026-01-09 21:58:47] 2026-01-10 02:57:49,727 | INFO     | pid: 1528663
[2026-01-09 21:58:47] 2026-01-10 02:57:49,727 | INFO     | pgrp: 1528663
[2026-01-09 21:58:47] 2026-01-10 02:57:49,727 | INFO     | corecount: 8
[2026-01-09 21:58:47] 2026-01-10 02:57:49,727 | INFO     | event service: False
[2026-01-09 21:58:47] 2026-01-10 02:57:49,727 | INFO     | sizes: {0: 2283964, 10: 2284226, 11: 2284254, 7125: 2311739, 7126: 2311738, 7127: 2320792, 7130: 2320976, 7142: 2321170}
[2026-01-09 21:58:47] 2026-01-10 02:57:49,727 | INFO     | --------------------------------------------------
[2026-01-09 21:58:47] 2026-01-10 02:57:49,727 | INFO     | 
[2026-01-09 21:58:47] 2026-01-10 02:57:49,727 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 21:58:47] 2026-01-10 02:57:49,774 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,774 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,774 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,774 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,774 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,774 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,774 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,775 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,775 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,775 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,775 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,775 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,775 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,775 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,775 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,775 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,775 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,775 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:58:47] 2026-01-10 02:57:49,775 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,775 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:58:47] 2026-01-10 02:57:49,775 | INFO     | job 6962015720 has completed (purged errors)
[2026-01-09 21:58:47] 2026-01-10 02:57:49,775 | INFO     | overall cleanup function is called
[2026-01-09 21:58:47] 2026-01-10 02:57:50,784 | INFO     | --- collectZombieJob: --- 10, [1528663]
[2026-01-09 21:58:47] 2026-01-10 02:57:50,784 | INFO     | zombie collector waiting for pid 1528663
[2026-01-09 21:58:47] 2026-01-10 02:57:50,784 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:58:47] 2026-01-10 02:57:50,784 | INFO     | collected zombie processes
[2026-01-09 21:58:47] 2026-01-10 02:57:50,784 | INFO     | will attempt to kill all subprocesses of pid=1528663
[2026-01-09 21:58:47] 2026-01-10 02:57:51,821 | INFO     | process IDs to be killed: [1528663] (in reverse order)
[2026-01-09 21:58:47] 2026-01-10 02:57:51,979 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:58:47] 2026-01-10 02:57:51,980 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:58:47] 2026-01-10 02:57:51,998 | INFO     | did not find any defunct processes belonging to 1528663
[2026-01-09 21:58:47] 2026-01-10 02:57:52,057 | INFO     | did not find any defunct processes belonging to 1528663
[2026-01-09 21:58:47] 2026-01-10 02:57:52,058 | INFO     | ready for new job
[2026-01-09 21:58:47] 2026-01-10 02:57:52,058 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:58:47] 2026-01-10 02:57:52,060 | INFO     | ***************************************
[2026-01-09 21:58:47] 2026-01-10 02:57:52,060 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:58:47] 2026-01-10 02:57:52,060 | INFO     | ***************************************
[2026-01-09 21:58:47] 2026-01-10 02:57:52,061 | INFO     | 
[2026-01-09 21:58:47] 2026-01-10 02:57:52,087 | INFO     | architecture information:
[2026-01-09 21:58:47] 2026-01-10 02:57:52,104 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:58:47] 2026-01-10 02:57:52,217 | INFO     | cat /etc/os-release:
[2026-01-09 21:58:47] NAME="CentOS Linux"
[2026-01-09 21:58:47] VERSION="7 (Core)"
[2026-01-09 21:58:47] ID="centos"
[2026-01-09 21:58:47] ID_LIKE="rhel fedora"
[2026-01-09 21:58:47] VERSION_ID="7"
[2026-01-09 21:58:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:58:47] ANSI_COLOR="0;31"
[2026-01-09 21:58:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:58:47] HOME_URL="https://www.centos.org/"
[2026-01-09 21:58:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:58:47] 
[2026-01-09 21:58:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:58:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:58:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:58:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:58:47] 
[2026-01-09 21:58:47] 2026-01-10 02:57:52,217 | INFO     | ***************************************
[2026-01-09 21:58:47] 2026-01-10 02:57:52,721 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 21:58:47] 2026-01-10 02:57:52,936 | INFO     | sufficient remaining disk space (127292932096 B)
[2026-01-09 21:58:47] 2026-01-10 02:57:52,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:58:47] 2026-01-10 02:57:52,936 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:58:47] 2026-01-10 02:57:52,936 | INFO     | update_server=False
[2026-01-09 21:58:47] 2026-01-10 02:57:52,937 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:58:47] 2026-01-10 02:57:52,938 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:58:47] 2026-01-10 02:57:52,944 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:58:47] 2026-01-10 02:57:53,082 | INFO     | all job control threads have been joined
[2026-01-09 21:58:47] 2026-01-10 02:57:53,399 | INFO     | all data control threads have been joined
[2026-01-09 21:58:47] 2026-01-10 02:57:53,407 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:58:47] 2026-01-10 02:57:53,407 | INFO     | aborting loop
[2026-01-09 21:58:47] 2026-01-10 02:57:53,945 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:57:53,974 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:57:54,089 | INFO     | [job] control thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:57:54,144 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:57:54,152 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:57:54,285 | INFO     | all payload control threads have been joined
[2026-01-09 21:58:47] 2026-01-10 02:57:54,407 | INFO     | [data] control thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:57:54,413 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:57:54,758 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:58:47] 2026-01-10 02:57:54,767 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:57:54,952 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:57:55,062 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:57:55,127 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:57:55,187 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:57:55,301 | INFO     | [payload] control thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:57:55,403 | INFO     | [job] validate thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:57:55,764 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:57:56,950 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:58:47] 2026-01-10 02:58:21,583 | INFO     | PID=1521541 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:58:47] 2026-01-10 02:58:21,583 | INFO     | .. there are 20 such processes running
[2026-01-09 21:58:47] 2026-01-10 02:58:21,583 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:58:47] 2026-01-10 02:58:21,583 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:58:47] 2026-01-10 02:58:21,583 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:58:47] 2026-01-10 02:58:24,684 [wrapper] supervise_pilot (15 min periods counter: 9)
[2026-01-09 21:58:47] 2026-01-10 02:58:39,756 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:58:47] 2026-01-10 02:58:41,026 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139640128841536)>', '<ExcThread(monitor, started 139639771879168)>']
[2026-01-09 21:58:47] 2026-01-10 02:58:41,712 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:58:47] 2026-01-10 02:58:41,712 | INFO     | [monitor] control thread has ended
[2026-01-09 21:58:47] 2026-01-10 02:58:46,052 | INFO     | all workflow threads have been joined
[2026-01-09 21:58:47] 2026-01-10 02:58:46,052 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:58:47] 2026-01-10 02:58:46,052 | INFO     | traces error code: 0
[2026-01-09 21:58:47] 2026-01-10 02:58:46,052 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:58:47] 2026-01-10 02:58:46,271 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:58:47] 2026-01-10 02:58:46,278 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:58:47] 2026-01-10 02:58:46,325 [wrapper] pilotpid: 1521541
[2026-01-09 21:58:47] 2026-01-10 02:58:46,356 [wrapper] Pilot exit status: 0
[2026-01-09 21:58:47] 2026-01-10 02:58:46,424 [wrapper] pandaids: 6962015720
[2026-01-09 21:58:47] 2026-01-10 02:58:46,603 [wrapper] cleanup supervisor_pilot 2050015 1521542
[2026-01-09 21:58:47] 2026-01-10 02:58:46,623 [wrapper] Test setup, not cleaning
[2026-01-09 21:58:47] 2026-01-10 02:58:46,651 [wrapper] apfmon messages muted
[2026-01-09 21:58:47] 2026-01-10 02:58:46,671 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:58:47] 2026-01-10 02:58:46,681 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:58:47]  *** Error codes and diagnostics ***
[2026-01-09 21:58:47]     "exeErrorCode": 0,
[2026-01-09 21:58:47]     "exeErrorDiag": "",
[2026-01-09 21:58:47]     "pilotErrorCode": 0,
[2026-01-09 21:58:47]     "pilotErrorDiag": "",
[2026-01-09 21:58:47]  *** Listing of results directory ***
[2026-01-09 21:58:47] total 446400
[2026-01-09 21:58:47] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 10:25 pilot3.tar.gz
[2026-01-09 21:58:47] -rwx------. 1 boincer umatlas     36322 Jan  7 10:31 runpilot2-wrapper.sh
[2026-01-09 21:58:47] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 10:31 queuedata.json
[2026-01-09 21:58:47] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:58:47] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:58 run_atlas
[2026-01-09 21:58:47] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:58 job.xml
[2026-01-09 21:58:47] -rw-r--r--. 2 boincer umatlas 225536154 Jan  9 19:58 EVNT.47898824._000377.pool.root.1
[2026-01-09 21:58:47] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:58 start_atlas.sh
[2026-01-09 21:58:47] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:58 shared
[2026-01-09 21:58:47] -rw-r--r--. 2 boincer umatlas    592384 Jan  9 19:58 input.tar.gz
[2026-01-09 21:58:47] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:58 boinc_lockfile
[2026-01-09 21:58:47] -rw-r--r--. 1 boincer umatlas      2516 Jan  9 19:58 pandaJob.out
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas        57 Jan  9 19:58 setup.sh.local
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas    989374 Jan  9 19:58 agis_schedconf.cvmfs.json
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:58 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:58:47] drwx------. 5 boincer umatlas      4096 Jan  9 19:58 pilot3
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas 224951497 Jan  9 21:56 HITS.47898826._008987.pool.root.1
[2026-01-09 21:58:47] -rw-r--r--. 1 boincer umatlas       530 Jan  9 21:56 boinc_task_state.xml
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas      1034 Jan  9 21:57 memory_monitor_summary.json
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas        95 Jan  9 21:57 pilot_heartbeat.json
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas    355504 Jan  9 21:57 log.47898826._008987.job.log.tgz.1
[2026-01-09 21:58:47] -rw-r--r--. 1 boincer umatlas      6958 Jan  9 21:57 init_data.xml
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas      7773 Jan  9 21:57 heartbeat.json
[2026-01-09 21:58:47] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:58 boinc_mmap_file
[2026-01-09 21:58:47] -rw-r--r--. 1 boincer umatlas        27 Jan  9 21:58 wrapper_checkpoint.txt
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas      4825 Jan  9 21:58 pilotlog.txt
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas   1000949 Jan  9 21:58 log.47898826._008987.job.log.1
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas       357 Jan  9 21:58 output.list
[2026-01-09 21:58:47] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:58 runtime_log
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas   1372160 Jan  9 21:58 result.tar.gz
[2026-01-09 21:58:47] -rw-r--r--. 1 boincer umatlas      9342 Jan  9 21:58 runtime_log.err
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas       652 Jan  9 21:58 blCODmggkx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm9FiKDmaPjcbn.diag
[2026-01-09 21:58:47] -rw-r--r--. 1 boincer umatlas     21155 Jan  9 21:58 stderr.txt
[2026-01-09 21:58:47] HITS file was successfully produced:
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas 224951497 Jan  9 21:56 shared/HITS.pool.root.1
[2026-01-09 21:58:47]  *** Contents of shared directory: ***
[2026-01-09 21:58:47] total 441876
[2026-01-09 21:58:47] -rw-r--r--. 2 boincer umatlas 225536154 Jan  9 19:58 ATLAS.root_0
[2026-01-09 21:58:47] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:58 start_atlas.sh
[2026-01-09 21:58:47] -rw-r--r--. 2 boincer umatlas    592384 Jan  9 19:58 input.tar.gz
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas 224951497 Jan  9 21:56 HITS.pool.root.1
[2026-01-09 21:58:47] -rw-------. 1 boincer umatlas   1372160 Jan  9 21:58 result.tar.gz
21:58:48 (1517666): run_atlas exited; CPU time 43405.746074
21:58:48 (1517666): called boinc_finish(0)

</stderr_txt>
]]>

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