Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:57:45 (3476424): wrapper (7.7.26015): starting
19:57:45 (3476424): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 19:57:45] Arguments: --nthreads 8
[2026-01-09 19:57:45] Threads: 8
[2026-01-09 19:57:45] Checking for CVMFS
[2026-01-09 19:57:46] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 19:57:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 19:57:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 19:57:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 19:57:47] 2.13.3.0 7100 94096 155396 154962 1 234 36188010 40960001 28253 16776704 0 1067904363 99.694 815327710 49175 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-09 19:57:47] CVMFS is ok
[2026-01-09 19:57:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 19:57:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 19:57:47] Further information can be found at the LHC@home message board.
[2026-01-09 19:57:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 19:57:47] Checking for apptainer binary...
[2026-01-09 19:57:47] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 19:57:47] Running /usr/bin/apptainer --version
[2026-01-09 19:57:47] apptainer version 1.4.5-2.el9
[2026-01-09 19:57:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 19:57:48] c8-6-10.aglt2.org
[2026-01-09 19:57:48] apptainer works
[2026-01-09 19:57:48] Set ATHENA_PROC_NUMBER=8
[2026-01-09 19:57:48] Set ATHENA_CORE_NUMBER=8
[2026-01-09 19:57:48] Starting ATLAS job with PandaID=6962320176
[2026-01-09 19:57:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 21:37:13]  *** The last 200 lines of the pilot log: ***
[2026-01-09 21:37:13]  is_tar=False
[2026-01-09 21:37:13]  lfn=log.47898826._014022.job.log.tgz.1
[2026-01-09 21:37:13]  mtime=0
[2026-01-09 21:37:13]  protocol_id=None
[2026-01-09 21:37:13]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-09 21:37:13]  replicas=None
[2026-01-09 21:37:13]  scope=mc23_13p6TeV
[2026-01-09 21:37:13]  status=None
[2026-01-09 21:37:13]  status_code=0
[2026-01-09 21:37:13]  storage_token=
[2026-01-09 21:37:13]  surl=/tmp/boinchome/slots/5/PanDA_Pilot-6962320176/log.47898826._014022.job.log.tgz.1
[2026-01-09 21:37:13]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/14/log.47898826._014022.job.log.tgz.1
[2026-01-09 21:37:13]  workdir=None
[2026-01-09 21:37:13] ]
[2026-01-09 21:37:13] 2026-01-10 02:36:31,936 | INFO     | transferring file log.47898826._014022.job.log.tgz.1 from /tmp/boinchome/slots/5/PanDA_Pilot-6962320176/log.47898826._014022.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-09 21:37:13] 2026-01-10 02:36:31,936 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/5/PanDA_Pilot-6962320176/log.47898826._014022.job.log.tgz.1 /tmp/boinchome/slots/5/log.47898826._014022.job
[2026-01-09 21:37:13] 2026-01-10 02:36:31,953 | INFO     | adding to output.list: log.47898826._014022.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6a/14/log.47898826._014022.job.log.tg
[2026-01-09 21:37:13] 2026-01-10 02:36:31,954 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-09 21:37:13] 2026-01-10 02:36:31,954 | INFO     | summary of transferred files:
[2026-01-09 21:37:13] 2026-01-10 02:36:31,954 | INFO     |  -- lfn=log.47898826._014022.job.log.tgz.1, status_code=0, status=transferred
[2026-01-09 21:37:13] 2026-01-10 02:36:31,954 | INFO     | stage-out finished correctly
[2026-01-09 21:37:13] 2026-01-10 02:36:33,000 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-09 21:37:13] 2026-01-10 02:36:33,098 | INFO     | job 6962320176 has state=finished
[2026-01-09 21:37:13] 2026-01-10 02:36:33,098 | INFO     | preparing for final server update for job 6962320176 in state='finished'
[2026-01-09 21:37:13] 2026-01-10 02:36:33,098 | INFO     | this job has now completed (state=finished)
[2026-01-09 21:37:13] 2026-01-10 02:36:33,098 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-09 21:37:13] 2026-01-10 02:36:33,099 | INFO     | log transfer has been attempted: DONE
[2026-01-09 21:37:13] 2026-01-10 02:36:33,099 | INFO     | job 6962320176 has finished - writing final server update
[2026-01-09 21:37:13] 2026-01-10 02:36:33,099 | INFO     | total number of processed events: 400 (read)
[2026-01-09 21:37:13] 2026-01-10 02:36:33,099 | INFO     | executing command: lscpu
[2026-01-09 21:37:13] 2026-01-10 02:36:33,157 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 21:37:13] 2026-01-10 02:36:33,265 | INFO     | time since job start (5855s) is within the limit (174528.0s)
[2026-01-09 21:37:13] 2026-01-10 02:36:34,311 | INFO     | monitor loop #427: job 0:6962320176 is in state 'finished'
[2026-01-09 21:37:13] 2026-01-10 02:36:34,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 21:37:13] 2026-01-10 02:36:35,271 | INFO     | time since job start (5857s) is within the limit (174528.0s)
[2026-01-09 21:37:13] 2026-01-10 02:36:36,652 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-09 21:37:13] 2026-01-10 02:36:36,657 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3778.1621250000003
[2026-01-09 21:37:13] 2026-01-10 02:36:36,670 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6962320176/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 21:37:13] 2026-01-10 02:36:36,670 | INFO     | extracted standard info from prmon json
[2026-01-09 21:37:13] 2026-01-10 02:36:36,670 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 21:37:13] 2026-01-10 02:36:36,670 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 21:37:13] 2026-01-10 02:36:36,671 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 21:37:13] 2026-01-10 02:36:36,671 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 21:37:13] 2026-01-10 02:36:36,672 | INFO     | fitting pss+swap vs Time
[2026-01-09 21:37:13] 2026-01-10 02:36:36,672 | INFO     | sum of square deviations: 204163828.0
[2026-01-09 21:37:13] 2026-01-10 02:36:36,672 | INFO     | sum of deviations: 1038373109.9999996
[2026-01-09 21:37:13] 2026-01-10 02:36:36,672 | INFO     | mean x: 1768009809.0
[2026-01-09 21:37:13] 2026-01-10 02:36:36,672 | INFO     | mean y: 2541865.9770114943
[2026-01-09 21:37:13] 2026-01-10 02:36:36,672 | INFO     | intersect: -8989520351.243149
[2026-01-09 21:37:13] 2026-01-10 02:36:36,673 | INFO     | chi2: 0.04115110388707419
[2026-01-09 21:37:13] 2026-01-10 02:36:36,673 | INFO     | current memory leak: 5.09 B/s (using 87 data points, chi2=0.04)
[2026-01-09 21:37:13] 2026-01-10 02:36:36,673 | INFO     | could have reported an average CPU frequency of 3796 MHz (7 samples)
[2026-01-09 21:37:13] 2026-01-10 02:36:36,673 | INFO     | ..............................
[2026-01-09 21:37:13] 2026-01-10 02:36:36,674 | INFO     | . Timing measurements:
[2026-01-09 21:37:13] 2026-01-10 02:36:36,674 | INFO     | . get job = 0 s
[2026-01-09 21:37:13] 2026-01-10 02:36:36,674 | INFO     | . initial setup = 5 s
[2026-01-09 21:37:13] 2026-01-10 02:36:36,674 | INFO     | . payload setup = 45 s
[2026-01-09 21:37:13] 2026-01-10 02:36:36,674 | INFO     | . stage-in = 0 s
[2026-01-09 21:37:13] 2026-01-10 02:36:36,674 | INFO     | . payload execution = 5741 s
[2026-01-09 21:37:13] 2026-01-10 02:36:36,674 | INFO     | . stage-out = 0 s
[2026-01-09 21:37:13] 2026-01-10 02:36:36,674 | INFO     | . log creation = 0 s
[2026-01-09 21:37:13] 2026-01-10 02:36:36,674 | INFO     | ..............................
[2026-01-09 21:37:13] 2026-01-10 02:36:36,724 | INFO     | 
[2026-01-09 21:37:13] 2026-01-10 02:36:36,724 | INFO     | job summary report
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | --------------------------------------------------
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | PanDA job id: 6962320176
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | task id: 47898826
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | errors: (none)
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | pilot state: finished 
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | transexitcode: 0
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | exeerrorcode: 0
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | exeerrordiag: 
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | exitcode: 0
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | exitmsg: OK
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | cpuconsumptiontime: 30971 s
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | nevents: 400
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | neventsw: 0
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | pid: 3496125
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | pgrp: 3496125
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | corecount: 8
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | event service: False
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 12: 2284025, 23: 2284053, 33: 2284343, 34: 2284527, 5790: 2311255, 5791: 2320253, 5792: 2320309, 5796: 2320503}
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | --------------------------------------------------
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | 
[2026-01-09 21:37:13] 2026-01-10 02:36:36,725 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-09 21:37:13] 2026-01-10 02:36:36,741 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,741 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,741 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,741 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,741 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,741 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,741 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,741 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,741 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,741 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,742 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,742 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,742 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,742 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,742 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,742 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,742 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,742 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 21:37:13] 2026-01-10 02:36:36,742 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,742 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 21:37:13] 2026-01-10 02:36:36,742 | INFO     | job 6962320176 has completed (purged errors)
[2026-01-09 21:37:13] 2026-01-10 02:36:36,742 | INFO     | overall cleanup function is called
[2026-01-09 21:37:13] 2026-01-10 02:36:37,758 | INFO     | --- collectZombieJob: --- 10, [3496125]
[2026-01-09 21:37:13] 2026-01-10 02:36:37,758 | INFO     | zombie collector waiting for pid 3496125
[2026-01-09 21:37:13] 2026-01-10 02:36:37,758 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 21:37:13] 2026-01-10 02:36:37,758 | INFO     | collected zombie processes
[2026-01-09 21:37:13] 2026-01-10 02:36:37,758 | INFO     | will attempt to kill all subprocesses of pid=3496125
[2026-01-09 21:37:13] 2026-01-10 02:36:38,152 | INFO     | process IDs to be killed: [3496125] (in reverse order)
[2026-01-09 21:37:13] 2026-01-10 02:36:38,299 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 21:37:13] 2026-01-10 02:36:38,300 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 21:37:13] 2026-01-10 02:36:38,323 | INFO     | did not find any defunct processes belonging to 3496125
[2026-01-09 21:37:13] 2026-01-10 02:36:38,344 | INFO     | did not find any defunct processes belonging to 3496125
[2026-01-09 21:37:13] 2026-01-10 02:36:38,344 | INFO     | ready for new job
[2026-01-09 21:37:13] 2026-01-10 02:36:38,344 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 21:37:13] 2026-01-10 02:36:38,345 | INFO     | ***************************************
[2026-01-09 21:37:13] 2026-01-10 02:36:38,346 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 21:37:13] 2026-01-10 02:36:38,346 | INFO     | ***************************************
[2026-01-09 21:37:13] 2026-01-10 02:36:38,346 | INFO     | 
[2026-01-09 21:37:13] 2026-01-10 02:36:38,350 | INFO     | architecture information:
[2026-01-09 21:37:13] 2026-01-10 02:36:38,351 | INFO     | executing command: cat /etc/os-release
[2026-01-09 21:37:13] 2026-01-10 02:36:38,364 | INFO     | cat /etc/os-release:
[2026-01-09 21:37:13] NAME="CentOS Linux"
[2026-01-09 21:37:13] VERSION="7 (Core)"
[2026-01-09 21:37:13] ID="centos"
[2026-01-09 21:37:13] ID_LIKE="rhel fedora"
[2026-01-09 21:37:13] VERSION_ID="7"
[2026-01-09 21:37:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 21:37:13] ANSI_COLOR="0;31"
[2026-01-09 21:37:13] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 21:37:13] HOME_URL="https://www.centos.org/"
[2026-01-09 21:37:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 21:37:13] 
[2026-01-09 21:37:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 21:37:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 21:37:13] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 21:37:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 21:37:13] 
[2026-01-09 21:37:13] 2026-01-10 02:36:38,364 | INFO     | ***************************************
[2026-01-09 21:37:13] 2026-01-10 02:36:38,867 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-09 21:37:13] 2026-01-10 02:36:38,881 | INFO     | sufficient remaining disk space (173657817088 B)
[2026-01-09 21:37:13] 2026-01-10 02:36:38,881 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 21:37:13] 2026-01-10 02:36:38,881 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 21:37:13] 2026-01-10 02:36:38,881 | INFO     | update_server=False
[2026-01-09 21:37:13] 2026-01-10 02:36:38,881 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 21:37:13] 2026-01-10 02:36:39,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 21:37:13] 2026-01-10 02:36:39,283 | INFO     | all data control threads have been joined
[2026-01-09 21:37:13] 2026-01-10 02:36:39,320 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 21:37:13] 2026-01-10 02:36:39,320 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 21:37:13] 2026-01-10 02:36:39,320 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:37:13] 2026-01-10 02:36:39,320 | INFO     | will abort loop
[2026-01-09 21:37:13] 2026-01-10 02:36:39,485 | INFO     | all job control threads have been joined
[2026-01-09 21:37:13] 2026-01-10 02:36:39,887 | INFO     | [job] retrieve thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:36:39,913 | INFO     | [data] copytool_in thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:36:40,020 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 21:37:13] 2026-01-10 02:36:40,068 | INFO     | [job] validate thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:36:40,258 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:36:40,288 | INFO     | [data] control thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:36:40,311 | INFO     | [payload] validate_post thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:36:40,326 | INFO     | [job] job monitor thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:36:40,347 | INFO     | all payload control threads have been joined
[2026-01-09 21:37:13] 2026-01-10 02:36:40,490 | INFO     | [job] control thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:36:40,797 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:36:41,119 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:36:41,343 | INFO     | [payload] failed_post thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:36:41,352 | INFO     | [payload] control thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:36:41,735 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 21:37:13] 2026-01-10 02:36:42,022 | INFO     | [data] copytool_out thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:36:42,736 | INFO     | [job] queue monitor thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:36:43,059 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:36:49,612 | INFO     | job.realtimelogging is not enabled
[2026-01-09 21:37:13] 2026-01-10 02:36:50,617 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 21:37:13] 2026-01-10 02:37:07,168 | INFO     | [monitor] cgroup control has ended
[2026-01-09 21:37:13] 2026-01-10 02:37:08,191 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140437550266176)>', '<ExcThread(monitor, started 140436807071488)>']
[2026-01-09 21:37:13] 2026-01-10 02:37:08,905 | INFO     | PID=3483345 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-09 21:37:13] 2026-01-10 02:37:08,906 | INFO     | .. there are 27 such processes running
[2026-01-09 21:37:13] 2026-01-10 02:37:08,906 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 21:37:13] 2026-01-10 02:37:08,906 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 21:37:13] 2026-01-10 02:37:08,906 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 21:37:13] 2026-01-10 02:37:08,906 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 21:37:13] 2026-01-10 02:37:08,906 | INFO     | [monitor] control thread has ended
[2026-01-09 21:37:13] 2026-01-10 02:37:13,218 | INFO     | all workflow threads have been joined
[2026-01-09 21:37:13] 2026-01-10 02:37:13,218 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 21:37:13] 2026-01-10 02:37:13,218 | INFO     | traces error code: 0
[2026-01-09 21:37:13] 2026-01-10 02:37:13,218 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 21:37:13] 2026-01-10 02:37:13,416 [wrapper] ==== pilot stdout END ====
[2026-01-09 21:37:13] 2026-01-10 02:37:13,419 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 21:37:13] 2026-01-10 02:37:13,421 [wrapper] pilotpid: 3483345
[2026-01-09 21:37:13] 2026-01-10 02:37:13,423 [wrapper] Pilot exit status: 0
[2026-01-09 21:37:13] 2026-01-10 02:37:13,454 [wrapper] pandaids: 6962320176
[2026-01-09 21:37:13] 2026-01-10 02:37:13,564 [wrapper] cleanup supervisor_pilot   78347 3483347
[2026-01-09 21:37:13] 2026-01-10 02:37:13,566 [wrapper] Test setup, not cleaning
[2026-01-09 21:37:13] 2026-01-10 02:37:13,569 [wrapper] apfmon messages muted
[2026-01-09 21:37:13] 2026-01-10 02:37:13,571 [wrapper] ==== wrapper stdout END ====
[2026-01-09 21:37:13] 2026-01-10 02:37:13,573 [wrapper] ==== wrapper stderr END ====
[2026-01-09 21:37:13]  *** Error codes and diagnostics ***
[2026-01-09 21:37:13]     "exeErrorCode": 0,
[2026-01-09 21:37:13]     "exeErrorDiag": "",
[2026-01-09 21:37:13]     "pilotErrorCode": 0,
[2026-01-09 21:37:13]     "pilotErrorDiag": "",
[2026-01-09 21:37:13]  *** Listing of results directory ***
[2026-01-09 21:37:13] total 436436
[2026-01-09 21:37:13] -rwx------. 1 boincer umatlas     36322 Jan  7 15:59 runpilot2-wrapper.sh
[2026-01-09 21:37:13] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 16:00 pilot3.tar.gz
[2026-01-09 21:37:13] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 16:04 queuedata.json
[2026-01-09 21:37:13] -rw-r--r--. 1 boincer umatlas       100 Jan  9 19:57 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 21:37:13] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 19:57 run_atlas
[2026-01-09 21:37:13] -rw-r--r--. 1 boincer umatlas       105 Jan  9 19:57 job.xml
[2026-01-09 21:37:13] -rw-r--r--. 2 boincer umatlas 224411889 Jan  9 19:57 EVNT.47898824._000607.pool.root.1
[2026-01-09 21:37:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:57 start_atlas.sh
[2026-01-09 21:37:13] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 19:57 shared
[2026-01-09 21:37:13] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 19:57 input.tar.gz
[2026-01-09 21:37:13] -rw-r--r--. 1 boincer umatlas         0 Jan  9 19:57 boinc_lockfile
[2026-01-09 21:37:13] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 19:57 pandaJob.out
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas        57 Jan  9 19:57 setup.sh.local
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas    989374 Jan  9 19:58 agis_schedconf.cvmfs.json
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas   1516240 Jan  9 19:58 agis_ddmendpoints.agis.ALL.json
[2026-01-09 21:37:13] drwx------. 5 boincer umatlas      4096 Jan  9 19:58 pilot3
[2026-01-09 21:37:13] -rw-r--r--. 1 boincer umatlas      7170 Jan  9 21:31 init_data.xml
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas 216237844 Jan  9 21:35 HITS.47898826._014022.pool.root.1
[2026-01-09 21:37:13] -rw-r--r--. 1 boincer umatlas       530 Jan  9 21:35 boinc_task_state.xml
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas      1044 Jan  9 21:36 memory_monitor_summary.json
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas    335924 Jan  9 21:36 log.47898826._014022.job.log.tgz.1
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas      7795 Jan  9 21:36 heartbeat.json
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas        95 Jan  9 21:37 pilot_heartbeat.json
[2026-01-09 21:37:13] -rw-r--r--. 1 boincer umatlas        27 Jan  9 21:37 wrapper_checkpoint.txt
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas      5083 Jan  9 21:37 pilotlog.txt
[2026-01-09 21:37:13] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 21:37 boinc_mmap_file
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas    832708 Jan  9 21:37 log.47898826._014022.job.log.1
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas       357 Jan  9 21:37 output.list
[2026-01-09 21:37:13] -rw-r--r--. 1 boincer umatlas       620 Jan  9 21:37 runtime_log
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas   1187840 Jan  9 21:37 result.tar.gz
[2026-01-09 21:37:13] -rw-r--r--. 1 boincer umatlas      9337 Jan  9 21:37 runtime_log.err
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas       657 Jan  9 21:37 4OdMDmUopx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmRndKDmKizvrn.diag
[2026-01-09 21:37:13] -rw-r--r--. 1 boincer umatlas     21615 Jan  9 21:37 stderr.txt
[2026-01-09 21:37:13] HITS file was successfully produced:
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas 216237844 Jan  9 21:35 shared/HITS.pool.root.1
[2026-01-09 21:37:13]  *** Contents of shared directory: ***
[2026-01-09 21:37:13] total 432092
[2026-01-09 21:37:13] -rw-r--r--. 2 boincer umatlas 224411889 Jan  9 19:57 ATLAS.root_0
[2026-01-09 21:37:13] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 19:57 start_atlas.sh
[2026-01-09 21:37:13] -rw-r--r--. 2 boincer umatlas    592395 Jan  9 19:57 input.tar.gz
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas 216237844 Jan  9 21:35 HITS.pool.root.1
[2026-01-09 21:37:13] -rw-------. 1 boincer umatlas   1187840 Jan  9 21:37 result.tar.gz
21:37:15 (3476424): run_atlas exited; CPU time 31135.430710
21:37:15 (3476424): called boinc_finish(0)

</stderr_txt>
]]>

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