Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:31:51 (2349294): wrapper (7.7.26015): starting
20:31:51 (2349294): wrapper: running run_atlas (--nthreads 3)
[2026-01-10 20:31:51] Arguments: --nthreads 3
[2026-01-10 20:31:51] Threads: 3
[2026-01-10 20:31:51] Checking for CVMFS
[2026-01-10 20:31:51] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 20:31:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 20:31:51] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 20:31:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 20:31:52] 2.13.3.0 2137178 1471 62448 154978 2 57 45547505 52428801 0 130560 0 669135 99.984 53334 15 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-10 20:31:52] CVMFS is ok
[2026-01-10 20:31:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 20:31:52] Checking for apptainer binary...
[2026-01-10 20:31:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 20:31:52] Running /usr/bin/apptainer --version
[2026-01-10 20:31:52] apptainer version 1.4.4-1.el9
[2026-01-10 20:31:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 20:31:52] testio004
[2026-01-10 20:31:52] apptainer works
[2026-01-10 20:31:52] Set ATHENA_PROC_NUMBER=3
[2026-01-10 20:31:52] Set ATHENA_CORE_NUMBER=3
[2026-01-10 20:31:52] Starting ATLAS job with PandaID=6962318684
[2026-01-10 20:31:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 23:20:58]  *** The last 200 lines of the pilot log: ***
[2026-01-10 23:20:58] 2026-01-10 14:20:21,149 | INFO     | monitor loop #753: job 0:6962318684 is in state 'finished'
[2026-01-10 23:20:58] 2026-01-10 14:20:21,149 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 23:20:58] 2026-01-10 14:20:22,864 | INFO     | time since job start (10081s) is within the limit (174528.0s)
[2026-01-10 23:20:58] 2026-01-10 14:20:23,652 | INFO     | monitor loop #754: job 0:6962318684 is in state 'finished'
[2026-01-10 23:20:58] 2026-01-10 14:20:23,652 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 23:20:58] 2026-01-10 14:20:24,869 | INFO     | time since job start (10083s) is within the limit (174528.0s)
[2026-01-10 23:20:58] 2026-01-10 14:20:26,154 | INFO     | monitor loop #755: job 0:6962318684 is in state 'finished'
[2026-01-10 23:20:58] 2026-01-10 14:20:26,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 23:20:58] 2026-01-10 14:20:26,566 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 23:20:58] 2026-01-10 14:20:26,566 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3600.0019999999995
[2026-01-10 23:20:58] 2026-01-10 14:20:26,567 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6962318684/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 23:20:58] 2026-01-10 14:20:26,567 | INFO     | extracted standard info from prmon json
[2026-01-10 23:20:58] 2026-01-10 14:20:26,567 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 23:20:58] 2026-01-10 14:20:26,567 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 23:20:58] 2026-01-10 14:20:26,568 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 23:20:58] 2026-01-10 14:20:26,568 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 23:20:58] 2026-01-10 14:20:26,569 | INFO     | fitting pss+swap vs Time
[2026-01-10 23:20:58] 2026-01-10 14:20:26,569 | INFO     | sum of square deviations: 1367728803.6280463
[2026-01-10 23:20:58] 2026-01-10 14:20:26,569 | INFO     | sum of deviations: 578323685.8658549
[2026-01-10 23:20:58] 2026-01-10 14:20:26,569 | INFO     | mean x: 1768049735.5914633
[2026-01-10 23:20:58] 2026-01-10 14:20:26,570 | INFO     | mean y: 2352693.475609756
[2026-01-10 23:20:58] 2026-01-10 14:20:26,570 | INFO     | intersect: -745240716.2479419
[2026-01-10 23:20:58] 2026-01-10 14:20:26,570 | INFO     | chi2: 2.050209264692814
[2026-01-10 23:20:58] 2026-01-10 14:20:26,570 | INFO     | sum of square deviations: 1246410173.584902
[2026-01-10 23:20:58] 2026-01-10 14:20:26,570 | INFO     | sum of deviations: 693973356.3207569
[2026-01-10 23:20:58] 2026-01-10 14:20:26,570 | INFO     | mean x: 1768049583.0943396
[2026-01-10 23:20:58] 2026-01-10 14:20:26,570 | INFO     | mean y: 2352838.9119496853
[2026-01-10 23:20:58] 2026-01-10 14:20:26,570 | INFO     | intersect: -982057694.0929909
[2026-01-10 23:20:58] 2026-01-10 14:20:26,570 | INFO     | chi2: 2.050868217357874
[2026-01-10 23:20:58] 2026-01-10 14:20:26,571 | INFO     | current chi2=2.050868217357874 (change=-0.032140751503164595 %)
[2026-01-10 23:20:58] 2026-01-10 14:20:26,571 | INFO     | right removable region: 158
[2026-01-10 23:20:58] 2026-01-10 14:20:26,571 | INFO     | sum of square deviations: 1246401023.584902
[2026-01-10 23:20:58] 2026-01-10 14:20:26,571 | INFO     | sum of deviations: -28170851872.471703
[2026-01-10 23:20:58] 2026-01-10 14:20:26,571 | INFO     | mean x: 1768049888.0943396
[2026-01-10 23:20:58] 2026-01-10 14:20:26,571 | INFO     | mean y: 2388500.364779874
[2026-01-10 23:20:58] 2026-01-10 14:20:26,571 | INFO     | intersect: 39963420750.955696
[2026-01-10 23:20:58] 2026-01-10 14:20:26,571 | INFO     | chi2: 0.26894245050913185
[2026-01-10 23:20:58] 2026-01-10 14:20:26,571 | INFO     | current chi2=0.26894245050913185 (change=86.88219514267838 %)
[2026-01-10 23:20:58] 2026-01-10 14:20:26,572 | INFO     | sum of square deviations: 1132468731.0389621
[2026-01-10 23:20:58] 2026-01-10 14:20:26,572 | INFO     | sum of deviations: -21506712250.779224
[2026-01-10 23:20:58] 2026-01-10 14:20:26,572 | INFO     | mean x: 1768050040.5974026
[2026-01-10 23:20:58] 2026-01-10 14:20:26,572 | INFO     | mean y: 2379549.551948052
[2026-01-10 23:20:58] 2026-01-10 14:20:26,572 | INFO     | intersect: 33579415652.987312
[2026-01-10 23:20:58] 2026-01-10 14:20:26,572 | INFO     | chi2: 0.24256437855926713
[2026-01-10 23:20:58] 2026-01-10 14:20:26,572 | INFO     | current chi2=0.24256437855926713 (change=9.808073028236597 %)
[2026-01-10 23:20:58] 2026-01-10 14:20:26,572 | INFO     | left removable region: 20
[2026-01-10 23:20:58] 2026-01-10 14:20:26,572 | INFO     | sum of square deviations: 814885162.869565
[2026-01-10 23:20:58] 2026-01-10 14:20:26,573 | INFO     | sum of deviations: -4556467759.130435
[2026-01-10 23:20:58] 2026-01-10 14:20:26,573 | INFO     | mean x: 1768050162.6086957
[2026-01-10 23:20:58] 2026-01-10 14:20:26,573 | INFO     | mean y: 2355015.275362319
[2026-01-10 23:20:58] 2026-01-10 14:20:26,573 | INFO     | intersect: 9888488582.95862
[2026-01-10 23:20:58] 2026-01-10 14:20:26,573 | INFO     | chi2: 0.08278417164685778
[2026-01-10 23:20:58] 2026-01-10 14:20:26,573 | INFO     | current memory leak: -5.59 B/s (using 138 data points, chi2=0.08)
[2026-01-10 23:20:58] 2026-01-10 14:20:26,573 | INFO     | could have reported an average CPU frequency of 3608 MHz (9 samples)
[2026-01-10 23:20:58] 2026-01-10 14:20:26,573 | INFO     | ..............................
[2026-01-10 23:20:58] 2026-01-10 14:20:26,573 | INFO     | . Timing measurements:
[2026-01-10 23:20:58] 2026-01-10 14:20:26,573 | INFO     | . get job = 0 s
[2026-01-10 23:20:58] 2026-01-10 14:20:26,573 | INFO     | . initial setup = 6 s
[2026-01-10 23:20:58] 2026-01-10 14:20:26,573 | INFO     | . payload setup = 4 s
[2026-01-10 23:20:58] 2026-01-10 14:20:26,573 | INFO     | . stage-in = 0 s
[2026-01-10 23:20:58] 2026-01-10 14:20:26,573 | INFO     | . payload execution = 9981 s
[2026-01-10 23:20:58] 2026-01-10 14:20:26,574 | INFO     | . stage-out = 0 s
[2026-01-10 23:20:58] 2026-01-10 14:20:26,574 | INFO     | . log creation = 0 s
[2026-01-10 23:20:58] 2026-01-10 14:20:26,574 | INFO     | ..............................
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | 
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | job summary report
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | --------------------------------------------------
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | PanDA job id: 6962318684
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | task id: 47898826
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | errors: (none)
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | pilot state: finished 
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | transexitcode: 0
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | exeerrorcode: 0
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | exeerrordiag: 
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | exitcode: 0
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | exitmsg: OK
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | cpuconsumptiontime: 26661 s
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | nevents: 400
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | neventsw: 0
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | pid: 2359495
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | pgrp: 2359495
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | corecount: 3
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | event service: False
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | sizes: {0: 2283969, 3: 2284231, 11: 2284259, 9989: 2312880, 9990: 2321878, 9992: 2321934, 10072: 2322320}
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | --------------------------------------------------
[2026-01-10 23:20:58] 2026-01-10 14:20:26,610 | INFO     | 
[2026-01-10 23:20:58] 2026-01-10 14:20:26,611 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-10 23:20:58] 2026-01-10 14:20:26,619 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | job 6962318684 has completed (purged errors)
[2026-01-10 23:20:58] 2026-01-10 14:20:26,620 | INFO     | overall cleanup function is called
[2026-01-10 23:20:58] 2026-01-10 14:20:27,627 | INFO     | --- collectZombieJob: --- 10, [2359495]
[2026-01-10 23:20:58] 2026-01-10 14:20:27,627 | INFO     | zombie collector waiting for pid 2359495
[2026-01-10 23:20:58] 2026-01-10 14:20:27,627 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 23:20:58] 2026-01-10 14:20:27,627 | INFO     | collected zombie processes
[2026-01-10 23:20:58] 2026-01-10 14:20:27,627 | INFO     | will attempt to kill all subprocesses of pid=2359495
[2026-01-10 23:20:58] 2026-01-10 14:20:27,658 | INFO     | process IDs to be killed: [2359495] (in reverse order)
[2026-01-10 23:20:58] 2026-01-10 14:20:27,677 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 23:20:58] 2026-01-10 14:20:27,677 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 23:20:58] 2026-01-10 14:20:27,678 | INFO     | did not find any defunct processes belonging to 2359495
[2026-01-10 23:20:58] 2026-01-10 14:20:27,679 | INFO     | did not find any defunct processes belonging to 2359495
[2026-01-10 23:20:58] 2026-01-10 14:20:27,679 | INFO     | ready for new job
[2026-01-10 23:20:58] 2026-01-10 14:20:27,679 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 23:20:58] 2026-01-10 14:20:27,680 | INFO     | ***************************************
[2026-01-10 23:20:58] 2026-01-10 14:20:27,680 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 23:20:58] 2026-01-10 14:20:27,680 | INFO     | ***************************************
[2026-01-10 23:20:58] 2026-01-10 14:20:27,680 | INFO     | 
[2026-01-10 23:20:58] 2026-01-10 14:20:27,680 | INFO     | architecture information:
[2026-01-10 23:20:58] 2026-01-10 14:20:27,680 | INFO     | executing command: cat /etc/os-release
[2026-01-10 23:20:58] 2026-01-10 14:20:27,687 | INFO     | cat /etc/os-release:
[2026-01-10 23:20:58] NAME="CentOS Linux"
[2026-01-10 23:20:58] VERSION="7 (Core)"
[2026-01-10 23:20:58] ID="centos"
[2026-01-10 23:20:58] ID_LIKE="rhel fedora"
[2026-01-10 23:20:58] VERSION_ID="7"
[2026-01-10 23:20:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 23:20:58] ANSI_COLOR="0;31"
[2026-01-10 23:20:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 23:20:58] HOME_URL="https://www.centos.org/"
[2026-01-10 23:20:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 23:20:58] 
[2026-01-10 23:20:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 23:20:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 23:20:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 23:20:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 23:20:58] 
[2026-01-10 23:20:58] 2026-01-10 14:20:27,687 | INFO     | ***************************************
[2026-01-10 23:20:58] 2026-01-10 14:20:28,190 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-10 23:20:58] 2026-01-10 14:20:28,198 | INFO     | sufficient remaining disk space (315292123136 B)
[2026-01-10 23:20:58] 2026-01-10 14:20:28,198 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 23:20:58] 2026-01-10 14:20:28,198 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 23:20:58] 2026-01-10 14:20:28,198 | INFO     | update_server=False
[2026-01-10 23:20:58] 2026-01-10 14:20:28,198 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 23:20:58] 2026-01-10 14:20:28,198 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 23:20:58] 2026-01-10 14:20:28,198 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 23:20:58] 2026-01-10 14:20:28,335 | INFO     | all data control threads have been joined
[2026-01-10 23:20:58] 2026-01-10 14:20:28,354 | INFO     | all job control threads have been joined
[2026-01-10 23:20:58] 2026-01-10 14:20:28,656 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 23:20:58] 2026-01-10 14:20:28,657 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 23:20:58] 2026-01-10 14:20:28,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 23:20:58] 2026-01-10 14:20:28,657 | INFO     | will abort loop
[2026-01-10 23:20:58] 2026-01-10 14:20:29,127 | INFO     | all payload control threads have been joined
[2026-01-10 23:20:58] 2026-01-10 14:20:29,203 | INFO     | [job] queue monitor thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:29,204 | INFO     | [job] retrieve thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:29,246 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:29,340 | INFO     | [data] control thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:29,359 | INFO     | [job] control thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:29,517 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:29,662 | INFO     | [job] job monitor thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:29,689 | INFO     | [job] validate thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:29,889 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 23:20:58] 2026-01-10 14:20:30,094 | INFO     | [payload] validate_post thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:30,132 | INFO     | [payload] control thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:30,204 | INFO     | [data] copytool_out thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:30,426 | INFO     | [payload] failed_post thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:30,607 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:30,661 | INFO     | [data] copytool_in thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:30,662 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:33,894 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 23:20:58] 2026-01-10 14:20:38,016 | INFO     | [monitor] cgroup control has ended
[2026-01-10 23:20:58] 2026-01-10 14:20:40,123 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140086634456896)>', '<ExcThread(monitor, started 140086163257088)>']
[2026-01-10 23:20:58] 2026-01-10 14:20:45,148 | INFO     | all workflow threads have been joined
[2026-01-10 23:20:58] 2026-01-10 14:20:45,148 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 23:20:58] 2026-01-10 14:20:45,148 | INFO     | traces error code: 0
[2026-01-10 23:20:58] 2026-01-10 14:20:45,148 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 23:20:58] 2026-01-10 14:20:57,962 | INFO     | PID=2352962 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 23:20:58] 2026-01-10 14:20:57,963 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 23:20:58] 2026-01-10 14:20:57,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 23:20:58] 2026-01-10 14:20:57,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 23:20:58] 2026-01-10 14:20:57,963 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 23:20:58] 2026-01-10 14:20:57,963 | INFO     | [monitor] control thread has ended
[2026-01-10 23:20:58] 2026-01-10 14:20:58,019 [wrapper] ==== pilot stdout END ====
[2026-01-10 23:20:58] 2026-01-10 14:20:58,021 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 23:20:58] 2026-01-10 14:20:58,022 [wrapper] pilotpid: 2352962
[2026-01-10 23:20:58] 2026-01-10 14:20:58,024 [wrapper] Pilot exit status: 0
[2026-01-10 23:20:58] 2026-01-10 14:20:58,029 [wrapper] pandaids: 6962318684
[2026-01-10 23:20:58] 2026-01-10 14:20:58,042 [wrapper] cleanup supervisor_pilot 2378864 2352963
[2026-01-10 23:20:58] 2026-01-10 14:20:58,043 [wrapper] Test setup, not cleaning
[2026-01-10 23:20:58] 2026-01-10 14:20:58,045 [wrapper] apfmon messages muted
[2026-01-10 23:20:58] 2026-01-10 14:20:58,046 [wrapper] ==== wrapper stdout END ====
[2026-01-10 23:20:58] 2026-01-10 14:20:58,048 [wrapper] ==== wrapper stderr END ====
[2026-01-10 23:20:58]  *** Error codes and diagnostics ***
[2026-01-10 23:20:58]     "exeErrorCode": 0,
[2026-01-10 23:20:58]     "exeErrorDiag": "",
[2026-01-10 23:20:58]     "pilotErrorCode": 0,
[2026-01-10 23:20:58]     "pilotErrorDiag": "",
[2026-01-10 23:20:58]  *** Listing of results directory ***
[2026-01-10 23:20:58] total 435980
[2026-01-10 23:20:58] -rwx------. 1 boinc boinc     36322 Jan  8 05:59 runpilot2-wrapper.sh
[2026-01-10 23:20:58] -rw-r--r--. 1 boinc boinc    579449 Jan  8 06:00 pilot3.tar.gz
[2026-01-10 23:20:58] -rw-r--r--. 1 boinc boinc      5112 Jan  8 06:02 queuedata.json
[2026-01-10 23:20:58] -rw-r--r--. 1 boinc boinc       100 Jan 10 20:31 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 23:20:58] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 20:31 run_atlas
[2026-01-10 23:20:58] -rw-r--r--. 1 boinc boinc       105 Jan 10 20:31 job.xml
[2026-01-10 23:20:58] -rw-r--r--. 2 boinc boinc     15847 Jan 10 20:31 start_atlas.sh
[2026-01-10 23:20:58] drwxrwx--x. 2 boinc boinc        68 Jan 10 20:31 shared
[2026-01-10 23:20:58] -rw-r--r--. 2 boinc boinc    592397 Jan 10 20:31 input.tar.gz
[2026-01-10 23:20:58] -rw-r--r--. 1 boinc boinc      9315 Jan 10 20:31 init_data.xml
[2026-01-10 23:20:58] -rw-r--r--. 2 boinc boinc 222642394 Jan 10 20:31 EVNT.47898824._000558.pool.root.1
[2026-01-10 23:20:58] -rw-r--r--. 1 boinc boinc         0 Jan 10 20:31 boinc_lockfile
[2026-01-10 23:20:58] -rw-r--r--. 1 boinc boinc      2519 Jan 10 20:31 pandaJob.out
[2026-01-10 23:20:58] -rw-------. 1 boinc boinc    989564 Jan 10 20:32 agis_schedconf.cvmfs.json
[2026-01-10 23:20:58] -rw-------. 1 boinc boinc   1516240 Jan 10 20:32 agis_ddmendpoints.agis.ALL.json
[2026-01-10 23:20:58] drwx------. 5 boinc boinc      4096 Jan 10 20:32 pilot3
[2026-01-10 23:20:58] -rw-------. 1 boinc boinc 216458208 Jan 10 23:18 HITS.47898826._013013.pool.root.1
[2026-01-10 23:20:58] -rw-r--r--. 1 boinc boinc       530 Jan 10 23:18 boinc_task_state.xml
[2026-01-10 23:20:58] -rw-------. 1 boinc boinc      1022 Jan 10 23:19 memory_monitor_summary.json
[2026-01-10 23:20:58] -rw-------. 1 boinc boinc    330860 Jan 10 23:19 log.47898826._013013.job.log.tgz.1
[2026-01-10 23:20:58] -rw-------. 1 boinc boinc      7775 Jan 10 23:20 heartbeat.json
[2026-01-10 23:20:58] -rw-r--r--. 1 boinc boinc      8192 Jan 10 23:20 boinc_mmap_file
[2026-01-10 23:20:58] -rw-r--r--. 1 boinc boinc        28 Jan 10 23:20 wrapper_checkpoint.txt
[2026-01-10 23:20:58] -rw-------. 1 boinc boinc       747 Jan 10 23:20 pilotlog.txt
[2026-01-10 23:20:58] -rw-------. 1 boinc boinc        95 Jan 10 23:20 pilot_heartbeat.json
[2026-01-10 23:20:58] -rw-------. 1 boinc boinc   1391591 Jan 10 23:20 log.47898826._013013.job.log.1
[2026-01-10 23:20:58] -rw-------. 1 boinc boinc       357 Jan 10 23:20 output.list
[2026-01-10 23:20:58] -rw-r--r--. 1 boinc boinc       620 Jan 10 23:20 runtime_log
[2026-01-10 23:20:58] -rw-------. 1 boinc boinc   1740800 Jan 10 23:20 result.tar.gz
[2026-01-10 23:20:58] -rw-r--r--. 1 boinc boinc      8776 Jan 10 23:20 runtime_log.err
[2026-01-10 23:20:58] -rw-------. 1 boinc boinc       646 Jan 10 23:20 qVnMDmfnpx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZhdKDmL39hNm.diag
[2026-01-10 23:20:58] -rw-r--r--. 1 boinc boinc     21081 Jan 10 23:20 stderr.txt
[2026-01-10 23:20:58] HITS file was successfully produced:
[2026-01-10 23:20:58] -rw-------. 1 boinc boinc 216458208 Jan 10 23:18 shared/HITS.pool.root.1
[2026-01-10 23:20:58]  *** Contents of shared directory: ***
[2026-01-10 23:20:58] total 431112
[2026-01-10 23:20:58] -rw-r--r--. 2 boinc boinc     15847 Jan 10 20:31 start_atlas.sh
[2026-01-10 23:20:58] -rw-r--r--. 2 boinc boinc    592397 Jan 10 20:31 input.tar.gz
[2026-01-10 23:20:58] -rw-r--r--. 2 boinc boinc 222642394 Jan 10 20:31 ATLAS.root_0
[2026-01-10 23:20:58] -rw-------. 1 boinc boinc 216458208 Jan 10 23:18 HITS.pool.root.1
[2026-01-10 23:20:58] -rw-------. 1 boinc boinc   1740800 Jan 10 23:20 result.tar.gz
23:21:00 (2349294): run_atlas exited; CPU time 26700.903140
23:21:00 (2349294): called boinc_finish(0)

</stderr_txt>
]]>

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