Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:06:52 (24282): wrapper (7.7.26015): starting
06:06:52 (24282): wrapper: running run_atlas (--nthreads 8)
[2026-01-10 06:06:52] Arguments: --nthreads 8
[2026-01-10 06:06:52] Threads: 8
[2026-01-10 06:06:52] Checking for CVMFS
[2026-01-10 06:06:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 06:06:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 06:06:54] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 06:06:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 06:06:56] 2.11.2.0 10693 36413 121968 154968 1 60 21172366 25165824 899 130560 0 15845749 99.825 8853703 3400 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-10 06:06:56] CVMFS is ok
[2026-01-10 06:06:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 06:06:56] Checking for apptainer binary...
[2026-01-10 06:06:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 06:06:56] Running /usr/bin/apptainer --version
[2026-01-10 06:06:56] apptainer version 1.3.2-1.el7
[2026-01-10 06:06:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 06:07:03] cg-vwn439.simple-grid.lan
[2026-01-10 06:07:03] apptainer works
[2026-01-10 06:07:03] Set ATHENA_PROC_NUMBER=8
[2026-01-10 06:07:03] Set ATHENA_CORE_NUMBER=8
[2026-01-10 06:07:03] Starting ATLAS job with PandaID=6962321637
[2026-01-10 06:07:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 12:08:24]  *** The last 200 lines of the pilot log: ***
[2026-01-10 12:08:24] 2026-01-10 11:07:11,539 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6962321637/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 12:08:24] 2026-01-10 11:07:11,540 | INFO     | extracted standard info from prmon json
[2026-01-10 12:08:24] 2026-01-10 11:07:11,540 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 12:08:24] 2026-01-10 11:07:11,540 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 12:08:24] 2026-01-10 11:07:11,540 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 12:08:24] 2026-01-10 11:07:11,541 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 12:08:24] 2026-01-10 11:07:11,548 | INFO     | fitting pss+swap vs Time
[2026-01-10 12:08:24] 2026-01-10 11:07:11,549 | INFO     | sum of square deviations: 12080189290.0
[2026-01-10 12:08:24] 2026-01-10 11:07:11,553 | INFO     | sum of deviations: 135600965466.99998
[2026-01-10 12:08:24] 2026-01-10 11:07:11,553 | INFO     | mean x: 1768032754.0
[2026-01-10 12:08:24] 2026-01-10 11:07:11,553 | INFO     | mean y: 2455636.7581120944
[2026-01-10 12:08:24] 2026-01-10 11:07:11,553 | INFO     | intersect: -19843835068.151764
[2026-01-10 12:08:24] 2026-01-10 11:07:11,554 | INFO     | chi2: 9.261193404739892
[2026-01-10 12:08:24] 2026-01-10 11:07:11,555 | INFO     | sum of square deviations: 11553509647.5
[2026-01-10 12:08:24] 2026-01-10 11:07:11,558 | INFO     | sum of deviations: 156053199919.0
[2026-01-10 12:08:24] 2026-01-10 11:07:11,559 | INFO     | mean x: 1768032601.5
[2026-01-10 12:08:24] 2026-01-10 11:07:11,559 | INFO     | mean y: 2461480.904191617
[2026-01-10 12:08:24] 2026-01-10 11:07:11,559 | INFO     | intersect: -23878346467.77755
[2026-01-10 12:08:24] 2026-01-10 11:07:11,559 | INFO     | chi2: 8.555847451311244
[2026-01-10 12:08:24] 2026-01-10 11:07:11,560 | INFO     | current chi2=8.555847451311244 (change=7.616145377847854 %)
[2026-01-10 12:08:24] 2026-01-10 11:07:11,560 | INFO     | right removable region: 333
[2026-01-10 12:08:24] 2026-01-10 11:07:11,560 | INFO     | sum of square deviations: 11553509647.5
[2026-01-10 12:08:24] 2026-01-10 11:07:11,564 | INFO     | sum of deviations: 16051679141.000027
[2026-01-10 12:08:24] 2026-01-10 11:07:11,564 | INFO     | mean x: 1768032906.5
[2026-01-10 12:08:24] 2026-01-10 11:07:11,564 | INFO     | mean y: 2490236.706586826
[2026-01-10 12:08:24] 2026-01-10 11:07:11,565 | INFO     | intersect: -2453897284.6392465
[2026-01-10 12:08:24] 2026-01-10 11:07:11,565 | INFO     | chi2: 4.245597685147409
[2026-01-10 12:08:24] 2026-01-10 11:07:11,565 | INFO     | current chi2=4.245597685147409 (change=54.15712101450655 %)
[2026-01-10 12:08:24] 2026-01-10 11:07:11,566 | INFO     | sum of square deviations: 11042365180.0
[2026-01-10 12:08:24] 2026-01-10 11:07:11,570 | INFO     | sum of deviations: -76751594704.0
[2026-01-10 12:08:24] 2026-01-10 11:07:11,570 | INFO     | mean x: 1768033059.0
[2026-01-10 12:08:24] 2026-01-10 11:07:11,570 | INFO     | mean y: 2517900.4437689967
[2026-01-10 12:08:24] 2026-01-10 11:07:11,570 | INFO     | intersect: 12291493546.116205
[2026-01-10 12:08:24] 2026-01-10 11:07:11,571 | INFO     | chi2: 1.369800975743623
[2026-01-10 12:08:24] 2026-01-10 11:07:11,571 | INFO     | current chi2=1.369800975743623 (change=67.73596847068983 %)
[2026-01-10 12:08:24] 2026-01-10 11:07:11,572 | INFO     | sum of square deviations: 10546523325.0
[2026-01-10 12:08:24] 2026-01-10 11:07:11,575 | INFO     | sum of deviations: -99085303701.00002
[2026-01-10 12:08:24] 2026-01-10 11:07:11,576 | INFO     | mean x: 1768033211.5
[2026-01-10 12:08:24] 2026-01-10 11:07:11,576 | INFO     | mean y: 2524722.475308642
[2026-01-10 12:08:24] 2026-01-10 11:07:11,576 | INFO     | intersect: 16613316953.85094
[2026-01-10 12:08:24] 2026-01-10 11:07:11,576 | INFO     | chi2: 1.0562741120830803
[2026-01-10 12:08:24] 2026-01-10 11:07:11,576 | INFO     | current chi2=1.0562741120830803 (change=22.88849761479681 %)
[2026-01-10 12:08:24] 2026-01-10 11:07:11,577 | INFO     | left removable region: 30
[2026-01-10 12:08:24] 2026-01-10 11:07:11,577 | INFO     | sum of square deviations: 8625843592.0
[2026-01-10 12:08:24] 2026-01-10 11:07:11,580 | INFO     | sum of deviations: -54143849002.0
[2026-01-10 12:08:24] 2026-01-10 11:07:11,581 | INFO     | mean x: 1768033486.0
[2026-01-10 12:08:24] 2026-01-10 11:07:11,581 | INFO     | mean y: 2524501.4620462046
[2026-01-10 12:08:24] 2026-01-10 11:07:11,581 | INFO     | intersect: 11100353609.474892
[2026-01-10 12:08:24] 2026-01-10 11:07:11,581 | INFO     | chi2: 0.23005781343047074
[2026-01-10 12:08:24] 2026-01-10 11:07:11,582 | INFO     | current memory leak: -6.28 B/s (using 303 data points, chi2=0.23)
[2026-01-10 12:08:24] 2026-01-10 11:07:11,582 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-10 12:08:24] 2026-01-10 11:07:11,583 | INFO     | ..............................
[2026-01-10 12:08:24] 2026-01-10 11:07:11,583 | INFO     | . Timing measurements:
[2026-01-10 12:08:24] 2026-01-10 11:07:11,583 | INFO     | . get job = 0 s
[2026-01-10 12:08:24] 2026-01-10 11:07:11,583 | INFO     | . initial setup = 11 s
[2026-01-10 12:08:24] 2026-01-10 11:07:11,583 | INFO     | . payload setup = 155 s
[2026-01-10 12:08:24] 2026-01-10 11:07:11,583 | INFO     | . stage-in = 0 s
[2026-01-10 12:08:24] 2026-01-10 11:07:11,583 | INFO     | . payload execution = 20839 s
[2026-01-10 12:08:24] 2026-01-10 11:07:11,583 | INFO     | . stage-out = 4 s
[2026-01-10 12:08:24] 2026-01-10 11:07:11,583 | INFO     | . log creation = 1 s
[2026-01-10 12:08:24] 2026-01-10 11:07:11,584 | INFO     | ..............................
[2026-01-10 12:08:24] 2026-01-10 11:07:11,706 | INFO     | 
[2026-01-10 12:08:24] 2026-01-10 11:07:11,706 | INFO     | job summary report
[2026-01-10 12:08:24] 2026-01-10 11:07:11,706 | INFO     | --------------------------------------------------
[2026-01-10 12:08:24] 2026-01-10 11:07:11,706 | INFO     | PanDA job id: 6962321637
[2026-01-10 12:08:24] 2026-01-10 11:07:11,706 | INFO     | task id: 47898826
[2026-01-10 12:08:24] 2026-01-10 11:07:11,707 | INFO     | errors: (none)
[2026-01-10 12:08:24] 2026-01-10 11:07:11,707 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 12:08:24] 2026-01-10 11:07:11,707 | INFO     | pilot state: finished 
[2026-01-10 12:08:24] 2026-01-10 11:07:11,707 | INFO     | transexitcode: 0
[2026-01-10 12:08:24] 2026-01-10 11:07:11,707 | INFO     | exeerrorcode: 0
[2026-01-10 12:08:24] 2026-01-10 11:07:11,707 | INFO     | exeerrordiag: 
[2026-01-10 12:08:24] 2026-01-10 11:07:11,707 | INFO     | exitcode: 0
[2026-01-10 12:08:24] 2026-01-10 11:07:11,707 | INFO     | exitmsg: OK
[2026-01-10 12:08:24] 2026-01-10 11:07:11,707 | INFO     | cpuconsumptiontime: 78060 s
[2026-01-10 12:08:24] 2026-01-10 11:07:11,708 | INFO     | nevents: 400
[2026-01-10 12:08:24] 2026-01-10 11:07:11,708 | INFO     | neventsw: 0
[2026-01-10 12:08:24] 2026-01-10 11:07:11,708 | INFO     | pid: 2110
[2026-01-10 12:08:24] 2026-01-10 11:07:11,708 | INFO     | pgrp: 2110
[2026-01-10 12:08:24] 2026-01-10 11:07:11,708 | INFO     | corecount: 8
[2026-01-10 12:08:24] 2026-01-10 11:07:11,708 | INFO     | event service: False
[2026-01-10 12:08:24] 2026-01-10 11:07:11,708 | INFO     | sizes: {0: 2283141, 1: 2283826, 2: 2284025, 3: 2284025, 13: 2284053, 24: 2284109, 35: 2284265, 46: 2284293, 56: 2284321, 67: 2284349, 78: 2284377, 88: 2284713, 99:
[2026-01-10 12:08:24] 2026-01-10 11:07:11,708 | INFO     | --------------------------------------------------
[2026-01-10 12:08:24] 2026-01-10 11:07:11,708 | INFO     | 
[2026-01-10 12:08:24] 2026-01-10 11:07:11,709 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2026-01-10 12:08:24] 2026-01-10 11:07:12,029 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,030 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,030 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,030 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,030 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,030 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,030 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,031 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,031 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,031 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,031 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,031 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,031 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,031 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,031 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,031 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,032 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,032 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 12:08:24] 2026-01-10 11:07:12,032 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,032 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 12:08:24] 2026-01-10 11:07:12,032 | INFO     | job 6962321637 has completed (purged errors)
[2026-01-10 12:08:24] 2026-01-10 11:07:12,032 | INFO     | overall cleanup function is called
[2026-01-10 12:08:24] 2026-01-10 11:07:13,041 | INFO     | --- collectZombieJob: --- 10, [2110]
[2026-01-10 12:08:24] 2026-01-10 11:07:13,041 | INFO     | zombie collector waiting for pid 2110
[2026-01-10 12:08:24] 2026-01-10 11:07:13,041 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 12:08:24] 2026-01-10 11:07:13,041 | INFO     | collected zombie processes
[2026-01-10 12:08:24] 2026-01-10 11:07:13,042 | INFO     | will attempt to kill all subprocesses of pid=2110
[2026-01-10 12:08:24] 2026-01-10 11:07:13,128 | INFO     | process IDs to be killed: [2110] (in reverse order)
[2026-01-10 12:08:24] 2026-01-10 11:07:13,997 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 12:08:24] 2026-01-10 11:07:13,997 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 12:08:24] 2026-01-10 11:07:13,999 | INFO     | did not find any defunct processes belonging to 2110
[2026-01-10 12:08:24] 2026-01-10 11:07:14,001 | INFO     | did not find any defunct processes belonging to 2110
[2026-01-10 12:08:24] 2026-01-10 11:07:14,001 | INFO     | ready for new job
[2026-01-10 12:08:24] 2026-01-10 11:07:14,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 12:08:24] 2026-01-10 11:07:14,004 | INFO     | ***************************************
[2026-01-10 12:08:24] 2026-01-10 11:07:14,004 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 12:08:24] 2026-01-10 11:07:14,004 | INFO     | ***************************************
[2026-01-10 12:08:24] 2026-01-10 11:07:14,004 | INFO     | 
[2026-01-10 12:08:24] 2026-01-10 11:07:14,005 | INFO     | pilot is running in a VM
[2026-01-10 12:08:24] 2026-01-10 11:07:14,005 | INFO     | architecture information:
[2026-01-10 12:08:24] 2026-01-10 11:07:14,015 | INFO     | executing command: cat /etc/os-release
[2026-01-10 12:08:24] 2026-01-10 11:07:14,272 | INFO     | cat /etc/os-release:
[2026-01-10 12:08:24] NAME="CentOS Linux"
[2026-01-10 12:08:24] VERSION="7 (Core)"
[2026-01-10 12:08:24] ID="centos"
[2026-01-10 12:08:24] ID_LIKE="rhel fedora"
[2026-01-10 12:08:24] VERSION_ID="7"
[2026-01-10 12:08:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 12:08:24] ANSI_COLOR="0;31"
[2026-01-10 12:08:24] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 12:08:24] HOME_URL="https://www.centos.org/"
[2026-01-10 12:08:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 12:08:24] 
[2026-01-10 12:08:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 12:08:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 12:08:24] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 12:08:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 12:08:24] 
[2026-01-10 12:08:24] 2026-01-10 11:07:14,272 | INFO     | ***************************************
[2026-01-10 12:08:24] 2026-01-10 11:07:14,775 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2026-01-10 12:08:24] 2026-01-10 11:07:14,990 | INFO     | sufficient remaining disk space (496827891712 B)
[2026-01-10 12:08:24] 2026-01-10 11:07:14,991 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 12:08:24] 2026-01-10 11:07:14,991 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 12:08:24] 2026-01-10 11:07:14,991 | INFO     | update_server=False
[2026-01-10 12:08:24] 2026-01-10 11:07:14,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 12:08:24] 2026-01-10 11:07:14,992 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 12:08:24] 2026-01-10 11:07:15,491 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-10 12:08:24] 2026-01-10 11:07:15,491 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-10 12:08:24] 2026-01-10 11:07:15,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:08:24] 2026-01-10 11:07:15,492 | INFO     | will abort loop
[2026-01-10 12:08:24] 2026-01-10 11:07:15,665 | INFO     | all payload control threads have been joined
[2026-01-10 12:08:24] 2026-01-10 11:07:15,789 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 12:08:24] 2026-01-10 11:07:15,871 | INFO     | all data control threads have been joined
[2026-01-10 12:08:24] 2026-01-10 11:07:15,997 | INFO     | [job] retrieve thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:16,229 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:16,262 | INFO     | all job control threads have been joined
[2026-01-10 12:08:24] 2026-01-10 11:07:16,291 | INFO     | [data] copytool_in thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:16,409 | INFO     | [payload] failed_post thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:16,497 | INFO     | [job] job monitor thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:16,543 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:16,671 | INFO     | [payload] control thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:16,709 | INFO     | [job] validate thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:16,720 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 12:08:24] 2026-01-10 11:07:16,730 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:16,807 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:16,859 | INFO     | [payload] validate_post thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:16,877 | INFO     | [data] control thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:17,268 | INFO     | [job] control thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:17,726 | INFO     | [job] queue monitor thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:17,796 | INFO     | [data] copytool_out thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:19,001 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 12:08:24] 2026-01-10 11:07:42,964 | INFO     | 21346s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-10 12:08:24] 2026-01-10 11:07:44,068 | INFO     | PID=28031 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-10 12:08:24] 2026-01-10 11:07:44,068 | INFO     | .. there are 2 such processes running
[2026-01-10 12:08:24] 2026-01-10 11:07:44,068 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 12:08:24] 2026-01-10 11:07:44,069 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 12:08:24] 2026-01-10 11:07:44,069 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 12:08:24] 2026-01-10 11:08:14,263 | INFO     | [monitor] cgroup control has ended
[2026-01-10 12:08:24] 2026-01-10 11:08:14,783 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695489451840)>', '<ExcThread(monitor, started 139694650144512)>']
[2026-01-10 12:08:24] 2026-01-10 11:08:15,255 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 12:08:24] 2026-01-10 11:08:15,255 | INFO     | [monitor] control thread has ended
[2026-01-10 12:08:24] 2026-01-10 11:08:19,809 | INFO     | all workflow threads have been joined
[2026-01-10 12:08:24] 2026-01-10 11:08:19,809 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 12:08:24] 2026-01-10 11:08:19,810 | INFO     | traces error code: 0
[2026-01-10 12:08:24] 2026-01-10 11:08:19,810 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 12:08:24] 2026-01-10 11:08:20,151 [wrapper] ==== pilot stdout END ====
[2026-01-10 12:08:24] 2026-01-10 11:08:20,234 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 12:08:24] 2026-01-10 11:08:20,344 [wrapper] pilotpid: 28031
[2026-01-10 12:08:24] 2026-01-10 11:08:20,426 [wrapper] Pilot exit status: 0
[2026-01-10 12:08:24] 2026-01-10 11:08:20,938 [wrapper] pandaids: 6962321637
[2026-01-10 12:08:24] 2026-01-10 11:08:21,800 [wrapper] cleanup supervisor_pilot  1276 28032
[2026-01-10 12:08:24] 2026-01-10 11:08:21,836 [wrapper] Test setup, not cleaning
[2026-01-10 12:08:24] 2026-01-10 11:08:21,861 [wrapper] apfmon messages muted
[2026-01-10 12:08:24] 2026-01-10 11:08:21,880 [wrapper] ==== wrapper stdout END ====
[2026-01-10 12:08:24] 2026-01-10 11:08:21,938 [wrapper] ==== wrapper stderr END ====
[2026-01-10 12:08:24]  *** Error codes and diagnostics ***
[2026-01-10 12:08:24]     "exeErrorCode": 0,
[2026-01-10 12:08:24]     "exeErrorDiag": "",
[2026-01-10 12:08:24]     "pilotErrorCode": 0,
[2026-01-10 12:08:24]     "pilotErrorDiag": "",
[2026-01-10 12:08:24]  *** Listing of results directory ***
[2026-01-10 12:08:24] total 438800
[2026-01-10 12:08:24] -rw-r--r--. 1 boinc boinc    579449 Jan  7 22:00 pilot3.tar.gz
[2026-01-10 12:08:24] -rwx------. 1 boinc boinc     36322 Jan  7 22:06 runpilot2-wrapper.sh
[2026-01-10 12:08:24] -rw-r--r--. 1 boinc boinc      5112 Jan  7 22:11 queuedata.json
[2026-01-10 12:08:24] -rw-r--r--. 1 boinc boinc       100 Jan 10 06:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 12:08:24] -rwxr-xr-x. 1 boinc boinc      7986 Jan 10 06:06 run_atlas
[2026-01-10 12:08:24] -rw-r--r--. 1 boinc boinc       105 Jan 10 06:06 job.xml
[2026-01-10 12:08:24] -rw-r--r--. 2 boinc boinc 225008794 Jan 10 06:06 EVNT.47898824._000692.pool.root.1
[2026-01-10 12:08:24] -rw-r--r--. 1 boinc boinc      6391 Jan 10 06:06 init_data.xml
[2026-01-10 12:08:24] -rw-r--r--. 2 boinc boinc     15847 Jan 10 06:06 start_atlas.sh
[2026-01-10 12:08:24] drwxrwx--x. 2 boinc boinc        68 Jan 10 06:06 shared
[2026-01-10 12:08:24] -rw-r--r--. 2 boinc boinc    592401 Jan 10 06:06 input.tar.gz
[2026-01-10 12:08:24] -rw-r--r--. 1 boinc boinc         0 Jan 10 06:06 boinc_lockfile
[2026-01-10 12:08:24] -rw-r--r--. 1 boinc boinc      2519 Jan 10 06:07 pandaJob.out
[2026-01-10 12:08:24] -rw-------. 1 boinc boinc    989374 Jan 10 06:11 agis_schedconf.cvmfs.json
[2026-01-10 12:08:24] drwx------. 5 boinc boinc      4096 Jan 10 06:11 pilot3
[2026-01-10 12:08:24] -rw-------. 1 boinc boinc 213640134 Jan 10 12:03 HITS.47898826._014838.pool.root.1
[2026-01-10 12:08:24] -rw-r--r--. 1 boinc boinc       531 Jan 10 12:04 boinc_task_state.xml
[2026-01-10 12:08:24] -rw-------. 1 boinc boinc      1012 Jan 10 12:05 memory_monitor_summary.json
[2026-01-10 12:08:24] -rw-------. 1 boinc boinc   1516240 Jan 10 12:05 agis_ddmendpoints.agis.ALL.json
[2026-01-10 12:08:24] -rw-------. 1 boinc boinc    558344 Jan 10 12:05 log.47898826._014838.job.log.tgz.1
[2026-01-10 12:08:24] -rw-------. 1 boinc boinc        95 Jan 10 12:06 pilot_heartbeat.json
[2026-01-10 12:08:24] -rw-------. 1 boinc boinc      7776 Jan 10 12:07 heartbeat.json
[2026-01-10 12:08:24] -rw-r--r--. 1 boinc boinc      8192 Jan 10 12:08 boinc_mmap_file
[2026-01-10 12:08:24] -rw-r--r--. 1 boinc boinc        28 Jan 10 12:08 wrapper_checkpoint.txt
[2026-01-10 12:08:24] -rw-------. 1 boinc boinc      5186 Jan 10 12:08 pilotlog.txt
[2026-01-10 12:08:24] -rw-------. 1 boinc boinc   2829882 Jan 10 12:08 log.47898826._014838.job.log.1
[2026-01-10 12:08:24] -rw-------. 1 boinc boinc       357 Jan 10 12:08 output.list
[2026-01-10 12:08:24] -rw-r--r--. 1 boinc boinc       620 Jan 10 12:08 runtime_log
[2026-01-10 12:08:24] -rw-------. 1 boinc boinc   3409920 Jan 10 12:08 result.tar.gz
[2026-01-10 12:08:24] -rw-r--r--. 1 boinc boinc      8817 Jan 10 12:08 runtime_log.err
[2026-01-10 12:08:24] -rw-------. 1 boinc boinc       657 Jan 10 12:08 6D1MDmJupx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrrdKDmUXSCOo.diag
[2026-01-10 12:08:24] -rw-r--r--. 1 boinc boinc     20793 Jan 10 12:08 stderr.txt
[2026-01-10 12:08:24] HITS file was successfully produced:
[2026-01-10 12:08:24] -rw-------. 1 boinc boinc 213640134 Jan 10 12:03 shared/HITS.pool.root.1
[2026-01-10 12:08:24]  *** Contents of shared directory: ***
[2026-01-10 12:08:24] total 432300
[2026-01-10 12:08:24] -rw-r--r--. 2 boinc boinc 225008794 Jan 10 06:06 ATLAS.root_0
[2026-01-10 12:08:24] -rw-r--r--. 2 boinc boinc     15847 Jan 10 06:06 start_atlas.sh
[2026-01-10 12:08:24] -rw-r--r--. 2 boinc boinc    592401 Jan 10 06:06 input.tar.gz
[2026-01-10 12:08:24] -rw-------. 1 boinc boinc 213640134 Jan 10 12:03 HITS.pool.root.1
[2026-01-10 12:08:24] -rw-------. 1 boinc boinc   3409920 Jan 10 12:08 result.tar.gz
12:08:26 (24282): run_atlas exited; CPU time 78270.095686
12:08:26 (24282): called boinc_finish(0)

</stderr_txt>
]]>

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