Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-10 02:56:16 (21620): vboxwrapper version 26210
2026-01-10 02:56:16 (21620): BOINC client version: 8.2.8
2026-01-10 02:56:22 (21620): Detected: VirtualBox VboxManage Interface (Version: 7.2.4)
2026-01-10 02:56:28 (21620): Successfully copied 'init_data.xml' to the shared directory.
2026-01-10 02:56:34 (21620): Create VM. (boinc_5700d6c0a3a20861, slot#4)
2026-01-10 02:56:41 (21620): Setting Memory Size for VM. (4400MB)
2026-01-10 02:56:42 (21620): Setting CPU Count for VM. (4)
2026-01-10 02:56:42 (21620): Setting Chipset Options for VM.
2026-01-10 02:56:43 (21620): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-10 02:56:43 (21620): Setting Boot Options for VM.
2026-01-10 02:56:44 (21620): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-10 02:56:44 (21620): Enabling VM Network Access.
2026-01-10 02:56:44 (21620): Disabling USB Support for VM.
2026-01-10 02:56:45 (21620): Disabling COM Port Support for VM.
2026-01-10 02:56:45 (21620): Disabling LPT Port Support for VM.
2026-01-10 02:56:45 (21620): Disabling Audio Support for VM.
2026-01-10 02:56:46 (21620): Disabling Clipboard Support for VM.
2026-01-10 02:56:46 (21620): Disabling Drag and Drop Support for VM.
2026-01-10 02:56:46 (21620): Adding storage controller(s) to VM.
2026-01-10 02:56:46 (21620): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-10 02:56:47 (21620): Adding VirtualBox Guest Additions to VM.
2026-01-10 02:56:48 (21620): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-10 02:56:48 (21620): forwarding host port 37916 to guest port 80
2026-01-10 02:56:48 (21620): Enabling remote desktop for VM.
2026-01-10 02:56:49 (21620): Enabling shared directory for VM.
2026-01-10 02:56:50 (21620): Starting VM using VBoxManage interface. (boinc_5700d6c0a3a20861, slot#4)
2026-01-10 02:57:03 (21620): Successfully started VM. (PID = '19084')
2026-01-10 02:57:03 (21620): Reporting VM Process ID to BOINC.
2026-01-10 02:57:03 (21620): Guest Log: BIOS: VirtualBox 7.2.4
2026-01-10 02:57:03 (21620): Guest Log: CPUID EDX: 0x178bfbff
2026-01-10 02:57:03 (21620): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-10 02:57:03 (21620): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-10 02:57:03 (21620): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-10 02:57:03 (21620): Detected: Web Application Enabled (http://localhost:37916)
2026-01-10 02:57:03 (21620): Detected: Remote Desktop Enabled (localhost:37917)
2026-01-10 02:57:03 (21620): Preference change detected
2026-01-10 02:57:03 (21620): Setting CPU throttle for VM. (100%)
2026-01-10 02:57:03 (21620): Setting checkpoint interval to 999 seconds. (Higher value of (Preference: 999 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-10 02:57:05 (21620): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-10 02:57:05 (21620): Guest Log: BIOS: Booting from Hard Disk...
2026-01-10 02:57:09 (21620): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-10 02:57:09 (21620): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-10 02:57:09 (21620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-10 02:57:10 (21620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-10 02:57:10 (21620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-10 02:57:10 (21620): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-10 02:57:10 (21620): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-10 02:57:20 (21620): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-10 02:57:20 (21620): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-10 02:57:39 (21620): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-10 02:57:39 (21620): Guest Log: 00:00:00.000268 main     Log opened 2026-01-10T02:57:38.839598000Z
2026-01-10 02:57:39 (21620): Guest Log: 00:00:00.000438 main     OS Product: Linux
2026-01-10 02:57:39 (21620): Guest Log: 00:00:00.000501 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-10 02:57:39 (21620): Guest Log: 00:00:00.000560 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-10 02:57:39 (21620): Guest Log: 00:00:00.000619 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-10 02:57:39 (21620): Guest Log: 00:00:00.000621 main     Process ID: 1307
2026-01-10 02:57:39 (21620): Guest Log: 00:00:00.000623 main     Package type: LINUX_64BITS_GENERIC
2026-01-10 02:57:39 (21620): Guest Log: 00:00:00.004899 main     5.2.32 r132073 started. Verbose level = 0
2026-01-10 02:57:40 (21620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-10 02:57:40 (21620): Guest Log: [INFO] Mounting shared directory
2026-01-10 02:57:40 (21620): Guest Log: [INFO] Checking for init_data.xml
2026-01-10 02:57:45 (21620): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-10 02:57:45 (21620): Guest Log: [INFO] Detected branch: prod
2026-01-10 02:57:45 (21620): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-10 02:57:46 (21620): Guest Log: Copying input files
2026-01-10 02:57:49 (21620): Guest Log: 00:00:10.015023 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 589 081 455 000ns (GuestNow=1 768 010 269 771 911 000 ns GuestLast=1 768 013 858 853 366 000 ns fSetTimeLastLoop=true )
2026-01-10 02:57:55 (21620): Guest Log: Copied input files into RunAtlas.
2026-01-10 02:57:56 (21620): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-10 02:57:56 (21620): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-10 02:57:56 (21620): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-10 02:57:56 (21620): Guest Log: Further information can be found at the LHC@home message board.
2026-01-10 02:58:34 (21620): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-10 02:58:35 (21620): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-10 02:58:35 (21620): Guest Log: 2.6.3.0 1581 0 32168 154963 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2026-01-10 02:58:37 (21620): Guest Log: copied the webapp to /var/www
2026-01-10 02:58:37 (21620): Guest Log: ATHENA_PROC_NUMBER=4
2026-01-10 02:58:37 (21620): Guest Log: ATHENA_CORE_NUMBER=4
2026-01-10 02:58:37 (21620): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-10 02:58:37 (21620): Guest Log:  *** Starting ATLAS job. (PandaID=6962013602 taskID=47898826) ***
2026-01-10 04:57:30 (21620): Status Report: Elapsed Time: '6000.151386'
2026-01-10 04:57:30 (21620): Status Report: CPU Time: '17308.000000'
2026-01-10 06:58:53 (21620): Status Report: Elapsed Time: '12000.248610'
2026-01-10 06:58:53 (21620): Status Report: CPU Time: '38171.312500'
2026-01-10 09:00:09 (21620): Status Report: Elapsed Time: '18000.782045'
2026-01-10 09:00:09 (21620): Status Report: CPU Time: '58852.796875'
2026-01-10 10:59:50 (21620): Status Report: Elapsed Time: '24000.982649'
2026-01-10 10:59:50 (21620): Status Report: CPU Time: '79292.890625'
2026-01-10 13:03:40 (21620): Status Report: Elapsed Time: '30001.262220'
2026-01-10 13:03:40 (21620): Status Report: CPU Time: '100428.890625'
2026-01-10 15:06:03 (21620): Status Report: Elapsed Time: '36001.542788'
2026-01-10 15:06:05 (21620): Status Report: CPU Time: '121347.671875'
2026-01-10 16:02:14 (21620): Guest Log:  *** Job finished ***
2026-01-10 16:02:14 (21620): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:01:58,441 | INFO     | end of generic workflow (traces error code: 0)
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:01:58,441 | INFO     | traces error code: 0
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:01:58,442 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:11,594 | INFO     | PID=6011 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:11,596 | INFO     | found 0 job(s) in 20 queues
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:11,596 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:11,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:11,597 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:11,597 | CRITICAL | thread 'MainThread' is not alive
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:11,597 | INFO     | [monitor] control thread has ended
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:11,801 [wrapper] ==== pilot stdout END ====
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:11,851 [wrapper] ==== wrapper stdout RESUME ====
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:11,884 [wrapper] pilotpid: 6011
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:11,908 [wrapper] Pilot exit status: 0
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:12,935 [wrapper] pandaids: 6962013602
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:13,192 [wrapper] cleanup supervisor_pilot 32149 6012
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:13,224 [wrapper] Test setup, not cleaning
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:13,257 [wrapper] apfmon messages muted
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:13,286 [wrapper] ==== wrapper stdout END ====
2026-01-10 16:02:14 (21620): Guest Log: 2026-01-10 15:02:13,319 [wrapper] ==== wrapper stderr END ====
2026-01-10 16:02:14 (21620): Guest Log:  *** Error codes and diagnostics ***
2026-01-10 16:02:14 (21620): Guest Log:     "exeErrorCode": 0,
2026-01-10 16:02:14 (21620): Guest Log:     "exeErrorDiag": "",
2026-01-10 16:02:14 (21620): Guest Log:     "pilotErrorCode": 0,
2026-01-10 16:02:14 (21620): Guest Log:     "pilotErrorDiag": "",
2026-01-10 16:02:14 (21620): Guest Log:  *** Listing of results directory ***
2026-01-10 16:02:14 (21620): Guest Log: total 225156
2026-01-10 16:02:14 (21620): Guest Log: -rw-r--r--. 1 atlas atlas    579449 Jan  7 15:25 pilot3.tar.gz
2026-01-10 16:02:14 (21620): Guest Log: -rwx------. 1 atlas atlas     36322 Jan  7 15:31 runpilot2-wrapper.sh
2026-01-10 16:02:14 (21620): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Jan  7 15:31 queuedata.json
2026-01-10 16:02:14 (21620): Guest Log: -rwxr-xr-x. 1 atlas atlas      8703 Jan 10 01:57 init_data.xml
2026-01-10 16:02:14 (21620): Guest Log: -rwxr-xr-x. 1 atlas atlas    592395 Jan 10 01:57 input.tar.gz
2026-01-10 16:02:14 (21620): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Jan 10 01:57 start_atlas.sh
2026-01-10 16:02:14 (21620): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 10 01:57 EVNT.47898824._000298.pool.root.1 -> /data/./ATLAS.root_0
2026-01-10 16:02:14 (21620): Guest Log: -rw-r--r--. 1 atlas atlas      2516 Jan 10 01:58 pandaJob.out
2026-01-10 16:02:14 (21620): Guest Log: -rw-------. 1 atlas atlas    989382 Jan 10 02:00 agis_schedconf.cvmfs.json
2026-01-10 16:02:14 (21620): Guest Log: drwx------. 5 atlas atlas      4096 Jan 10 02:01 pilot3
2026-01-10 16:02:14 (21620): Guest Log: -rw-------. 1 atlas atlas 213331660 Jan 10 14:59 HITS.47898826._008402.pool.root.1
2026-01-10 16:02:14 (21620): Guest Log: -rw-------. 1 atlas atlas      1042 Jan 10 15:00 memory_monitor_summary.json
2026-01-10 16:02:14 (21620): Guest Log: -rw-------. 1 atlas atlas   1516240 Jan 10 15:00 agis_ddmendpoints.agis.ALL.json
2026-01-10 16:02:14 (21620): Guest Log: -rw-------. 1 atlas atlas    826867 Jan 10 15:00 log.47898826._008402.job.log.tgz.1
2026-01-10 16:02:14 (21620): Guest Log: -rw-------. 1 atlas atlas      7826 Jan 10 15:01 heartbeat.json
2026-01-10 16:02:14 (21620): Guest Log: -rw-------. 1 atlas atlas        95 Jan 10 15:02 pilot_heartbeat.json
2026-01-10 16:02:14 (21620): Guest Log: -rw-------. 1 atlas atlas       814 Jan 10 15:02 pilotlog.txt
2026-01-10 16:02:14 (21620): Guest Log: -rw-------. 1 atlas atlas   5867910 Jan 10 15:02 log.47898826._008402.job.log.1
2026-01-10 16:02:14 (21620): Guest Log: -rw-------. 1 atlas atlas       357 Jan 10 15:02 output.list
2026-01-10 16:02:14 (21620): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 10 15:02 runtime_log
2026-01-10 16:02:14 (21620): Guest Log: -rw-------. 1 atlas atlas   6717440 Jan 10 15:02 result.tar.gz
2026-01-10 16:02:14 (21620): Guest Log: -rw-r--r--. 1 atlas atlas      8759 Jan 10 15:02 runtime_log.err
2026-01-10 16:02:14 (21620): Guest Log: -rw-------. 1 atlas atlas       664 Jan 10 15:02 2IRNDmAgkx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm06cKDm5VCEQo.diag
2026-01-10 16:02:14 (21620): Guest Log: Looking for outputfile HITS.47898826._008402.pool.root.1
2026-01-10 16:02:14 (21620): Guest Log: HITS file was successfully produced
2026-01-10 16:02:14 (21620): Guest Log: -rw-------. 1 atlas atlas 213331660 Jan 10 14:59 /home/atlas/RunAtlas/HITS.47898826._008402.pool.root.1
2026-01-10 16:02:23 (21620): Guest Log: Successfully finished the ATLAS job!
2026-01-10 16:02:23 (21620): Guest Log: Copying the results back to the shared directory!
2026-01-10 16:02:24 (21620): Guest Log:  *** Contents of shared directory: ***
2026-01-10 16:02:24 (21620): Guest Log: total 432060
2026-01-10 16:02:24 (21620): Guest Log: -rwxrwxrwx. 1 root root 221755772 Jan 10 01:56 ATLAS.root_0
2026-01-10 16:02:24 (21620): Guest Log: -rwxrwxrwx. 1 root root 213331660 Jan 10 15:02 HITS.pool.root.1
2026-01-10 16:02:24 (21620): Guest Log: -rwxrwxrwx. 1 root root      8703 Jan 10 01:56 init_data.xml
2026-01-10 16:02:24 (21620): Guest Log: -rwxrwxrwx. 1 root root    592395 Jan  9 22:45 input.tar.gz
2026-01-10 16:02:24 (21620): Guest Log: -rwxrwxrwx. 1 root root   6717440 Jan 10 15:02 result.tar.gz
2026-01-10 16:02:24 (21620): Guest Log: -rwxrwxrwx. 1 root root     15847 Jan  9 22:45 start_atlas.sh
2026-01-10 16:02:24 (21620): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-10 16:02:24 (21620): VM Completion File Detected.
2026-01-10 16:02:24 (21620): Powering off VM.
2026-01-10 16:02:28 (21620): Successfully stopped VM.
2026-01-10 16:02:28 (21620): Deregistering VM. (boinc_5700d6c0a3a20861, slot#4)
2026-01-10 16:02:28 (21620): Removing network bandwidth throttle group from VM.
2026-01-10 16:02:28 (21620): Removing VM from VirtualBox.
2026-01-10 16:02:34 (21620): called boinc_finish(0)

</stderr_txt>
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