Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
20:46:04 (892697): wrapper (7.7.26015): starting
20:46:04 (892697): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 20:46:04] Arguments: --nthreads 9
[2026-01-09 20:46:04] Threads: 9
[2026-01-09 20:46:04] Checking for CVMFS
[2026-01-09 20:46:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 20:46:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 20:46:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 20:46:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 20:46:06] 2.13.3.0 12204 23678 224356 154963 2 67 36503809 40960000 25874 16776704 0 93292900 99.676 91798447 35288 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 20:46:06] CVMFS is ok
[2026-01-09 20:46:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 20:46:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 20:46:06] Further information can be found at the LHC@home message board.
[2026-01-09 20:46:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 20:46:06] Checking for apptainer binary...
[2026-01-09 20:46:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 20:46:06] Running /usr/bin/apptainer --version
[2026-01-09 20:46:06] apptainer version 1.4.5-2.el9
[2026-01-09 20:46:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 20:46:06] c-212-15.aglt2.org
[2026-01-09 20:46:06] apptainer works
[2026-01-09 20:46:06] Set ATHENA_PROC_NUMBER=9
[2026-01-09 20:46:06] Set ATHENA_CORE_NUMBER=9
[2026-01-09 20:46:06] Starting ATLAS job with PandaID=6962018568
[2026-01-09 20:46:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 23:07:01]  *** The last 200 lines of the pilot log: ***
[2026-01-09 23:07:01] 2026-01-10 04:06:18,050 | INFO     | total number of processed events: 400 (read)
[2026-01-09 23:07:01] 2026-01-10 04:06:18,051 | INFO     | executing command: lscpu
[2026-01-09 23:07:01] 2026-01-10 04:06:18,115 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-09 23:07:01] 2026-01-10 04:06:18,748 | INFO     | monitor loop #598: job 0:6962018568 is in state 'finished'
[2026-01-09 23:07:01] 2026-01-10 04:06:18,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:07:01] 2026-01-10 04:06:19,137 | INFO     | time since job start (8379s) is within the limit (174528.0s)
[2026-01-09 23:07:01] 2026-01-10 04:06:21,142 | INFO     | time since job start (8381s) is within the limit (174528.0s)
[2026-01-09 23:07:01] 2026-01-10 04:06:21,252 | INFO     | monitor loop #599: job 0:6962018568 is in state 'finished'
[2026-01-09 23:07:01] 2026-01-10 04:06:21,252 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 23:07:01] 2026-01-10 04:06:22,242 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-09 23:07:01] 2026-01-10 04:06:22,253 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3249.276989583334
[2026-01-09 23:07:01] 2026-01-10 04:06:22,267 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6962018568/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 23:07:01] 2026-01-10 04:06:22,268 | INFO     | extracted standard info from prmon json
[2026-01-09 23:07:01] 2026-01-10 04:06:22,268 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 23:07:01] 2026-01-10 04:06:22,268 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 23:07:01] 2026-01-10 04:06:22,269 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 23:07:01] 2026-01-10 04:06:22,269 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 23:07:01] 2026-01-10 04:06:22,271 | INFO     | fitting pss+swap vs Time
[2026-01-09 23:07:01] 2026-01-10 04:06:22,271 | INFO     | sum of square deviations: 797284152.9927018
[2026-01-09 23:07:01] 2026-01-10 04:06:22,272 | INFO     | sum of deviations: 8829825748.211672
[2026-01-09 23:07:01] 2026-01-10 04:06:22,272 | INFO     | mean x: 1768013812.0072992
[2026-01-09 23:07:01] 2026-01-10 04:06:22,272 | INFO     | mean y: 2551423.7883211677
[2026-01-09 23:07:01] 2026-01-10 04:06:22,272 | INFO     | intersect: -19577988113.912514
[2026-01-09 23:07:01] 2026-01-10 04:06:22,273 | INFO     | chi2: 2.855617579862042
[2026-01-09 23:07:01] 2026-01-10 04:06:22,273 | INFO     | sum of square deviations: 713134042.9924244
[2026-01-09 23:07:01] 2026-01-10 04:06:22,273 | INFO     | sum of deviations: 16754294504.053028
[2026-01-09 23:07:01] 2026-01-10 04:06:22,274 | INFO     | mean x: 1768013659.5075758
[2026-01-09 23:07:01] 2026-01-10 04:06:22,274 | INFO     | mean y: 2565309.446969697
[2026-01-09 23:07:01] 2026-01-10 04:06:22,274 | INFO     | intersect: -41534957446.13564
[2026-01-09 23:07:01] 2026-01-10 04:06:22,274 | INFO     | chi2: 2.1982272982214828
[2026-01-09 23:07:01] 2026-01-10 04:06:22,274 | INFO     | current chi2=2.1982272982214828 (change=23.02094952337135 %)
[2026-01-09 23:07:01] 2026-01-10 04:06:22,274 | INFO     | right removable region: 131
[2026-01-09 23:07:01] 2026-01-10 04:06:22,274 | INFO     | sum of square deviations: 713133432.9924244
[2026-01-09 23:07:01] 2026-01-10 04:06:22,275 | INFO     | sum of deviations: -18001508471.49242
[2026-01-09 23:07:01] 2026-01-10 04:06:22,275 | INFO     | mean x: 1768013964.5075758
[2026-01-09 23:07:01] 2026-01-10 04:06:22,275 | INFO     | mean y: 2599401.992424242
[2026-01-09 23:07:01] 2026-01-10 04:06:22,275 | INFO     | intersect: 44632281432.53343
[2026-01-09 23:07:01] 2026-01-10 04:06:22,275 | INFO     | chi2: 0.9108210834517658
[2026-01-09 23:07:01] 2026-01-10 04:06:22,275 | INFO     | current chi2=0.9108210834517658 (change=68.10423461898674 %)
[2026-01-09 23:07:01] 2026-01-10 04:06:22,276 | INFO     | sum of square deviations: 635122362.9921248
[2026-01-09 23:07:01] 2026-01-10 04:06:22,276 | INFO     | sum of deviations: -18668745187.11023
[2026-01-09 23:07:01] 2026-01-10 04:06:22,276 | INFO     | mean x: 1768014117.007874
[2026-01-09 23:07:01] 2026-01-10 04:06:22,276 | INFO     | mean y: 2600702.1102362205
[2026-01-09 23:07:01] 2026-01-10 04:06:22,276 | INFO     | intersect: 51971491991.24117
[2026-01-09 23:07:01] 2026-01-10 04:06:22,276 | INFO     | chi2: 0.9014327605123914
[2026-01-09 23:07:01] 2026-01-10 04:06:22,277 | INFO     | current chi2=0.9014327605123914 (change=1.0307538011521657 %)
[2026-01-09 23:07:01] 2026-01-10 04:06:22,277 | INFO     | left removable region: 20
[2026-01-09 23:07:01] 2026-01-10 04:06:22,277 | INFO     | sum of square deviations: 424045160.0
[2026-01-09 23:07:01] 2026-01-10 04:06:22,277 | INFO     | sum of deviations: 96573247.99999936
[2026-01-09 23:07:01] 2026-01-10 04:06:22,277 | INFO     | mean x: 1768014239.0
[2026-01-09 23:07:01] 2026-01-10 04:06:22,277 | INFO     | mean y: 2592114.4684684686
[2026-01-09 23:07:01] 2026-01-10 04:06:22,278 | INFO     | intersect: -400060465.20129395
[2026-01-09 23:07:01] 2026-01-10 04:06:22,278 | INFO     | chi2: 0.10780182310284953
[2026-01-09 23:07:01] 2026-01-10 04:06:22,278 | INFO     | current memory leak: 0.23 B/s (using 111 data points, chi2=0.11)
[2026-01-09 23:07:01] 2026-01-10 04:06:22,278 | INFO     | could have reported an average CPU frequency of 3281 MHz (8 samples)
[2026-01-09 23:07:01] 2026-01-10 04:06:22,278 | INFO     | ..............................
[2026-01-09 23:07:01] 2026-01-10 04:06:22,279 | INFO     | . Timing measurements:
[2026-01-09 23:07:01] 2026-01-10 04:06:22,279 | INFO     | . get job = 0 s
[2026-01-09 23:07:01] 2026-01-10 04:06:22,279 | INFO     | . initial setup = 4 s
[2026-01-09 23:07:01] 2026-01-10 04:06:22,279 | INFO     | . payload setup = 18 s
[2026-01-09 23:07:01] 2026-01-10 04:06:22,279 | INFO     | . stage-in = 0 s
[2026-01-09 23:07:01] 2026-01-10 04:06:22,279 | INFO     | . payload execution = 8319 s
[2026-01-09 23:07:01] 2026-01-10 04:06:22,279 | INFO     | . stage-out = 0 s
[2026-01-09 23:07:01] 2026-01-10 04:06:22,279 | INFO     | . log creation = 0 s
[2026-01-09 23:07:01] 2026-01-10 04:06:22,279 | INFO     | ..............................
[2026-01-09 23:07:01] 2026-01-10 04:06:22,567 | INFO     | 
[2026-01-09 23:07:01] 2026-01-10 04:06:22,568 | INFO     | job summary report
[2026-01-09 23:07:01] 2026-01-10 04:06:22,568 | INFO     | --------------------------------------------------
[2026-01-09 23:07:01] 2026-01-10 04:06:22,568 | INFO     | PanDA job id: 6962018568
[2026-01-09 23:07:01] 2026-01-10 04:06:22,568 | INFO     | task id: 47898826
[2026-01-09 23:07:01] 2026-01-10 04:06:22,568 | INFO     | errors: (none)
[2026-01-09 23:07:01] 2026-01-10 04:06:22,568 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 23:07:01] 2026-01-10 04:06:22,568 | INFO     | pilot state: finished 
[2026-01-09 23:07:01] 2026-01-10 04:06:22,568 | INFO     | transexitcode: 0
[2026-01-09 23:07:01] 2026-01-10 04:06:22,569 | INFO     | exeerrorcode: 0
[2026-01-09 23:07:01] 2026-01-10 04:06:22,569 | INFO     | exeerrordiag: 
[2026-01-09 23:07:01] 2026-01-10 04:06:22,569 | INFO     | exitcode: 0
[2026-01-09 23:07:01] 2026-01-10 04:06:22,569 | INFO     | exitmsg: OK
[2026-01-09 23:07:01] 2026-01-10 04:06:22,569 | INFO     | cpuconsumptiontime: 41969 s
[2026-01-09 23:07:01] 2026-01-10 04:06:22,569 | INFO     | nevents: 400
[2026-01-09 23:07:01] 2026-01-10 04:06:22,569 | INFO     | neventsw: 0
[2026-01-09 23:07:01] 2026-01-10 04:06:22,569 | INFO     | pid: 909658
[2026-01-09 23:07:01] 2026-01-10 04:06:22,569 | INFO     | pgrp: 909658
[2026-01-09 23:07:01] 2026-01-10 04:06:22,569 | INFO     | corecount: 9
[2026-01-09 23:07:01] 2026-01-10 04:06:22,569 | INFO     | event service: False
[2026-01-09 23:07:01] 2026-01-10 04:06:22,569 | INFO     | sizes: {0: 2283136, 1: 2283878, 2: 2283992, 12: 2284020, 14: 2284310, 23: 2284338, 8342: 2312253, 8343: 2321307, 8348: 2321445}
[2026-01-09 23:07:01] 2026-01-10 04:06:22,570 | INFO     | --------------------------------------------------
[2026-01-09 23:07:01] 2026-01-10 04:06:22,570 | INFO     | 
[2026-01-09 23:07:01] 2026-01-10 04:06:22,570 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-09 23:07:01] 2026-01-10 04:06:22,593 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,594 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,594 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,594 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,594 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,594 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,594 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,594 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,594 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,595 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,595 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,595 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,595 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,595 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,595 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 23:07:01] 2026-01-10 04:06:22,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,595 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 23:07:01] 2026-01-10 04:06:22,595 | INFO     | job 6962018568 has completed (purged errors)
[2026-01-09 23:07:01] 2026-01-10 04:06:22,595 | INFO     | overall cleanup function is called
[2026-01-09 23:07:01] 2026-01-10 04:06:23,604 | INFO     | --- collectZombieJob: --- 10, [909658]
[2026-01-09 23:07:01] 2026-01-10 04:06:23,605 | INFO     | zombie collector waiting for pid 909658
[2026-01-09 23:07:01] 2026-01-10 04:06:23,605 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 23:07:01] 2026-01-10 04:06:23,605 | INFO     | collected zombie processes
[2026-01-09 23:07:01] 2026-01-10 04:06:23,605 | INFO     | will attempt to kill all subprocesses of pid=909658
[2026-01-09 23:07:01] 2026-01-10 04:06:23,984 | INFO     | process IDs to be killed: [909658] (in reverse order)
[2026-01-09 23:07:01] 2026-01-10 04:06:24,119 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 23:07:01] 2026-01-10 04:06:24,119 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 23:07:01] 2026-01-10 04:06:24,139 | INFO     | did not find any defunct processes belonging to 909658
[2026-01-09 23:07:01] 2026-01-10 04:06:24,158 | INFO     | did not find any defunct processes belonging to 909658
[2026-01-09 23:07:01] 2026-01-10 04:06:24,158 | INFO     | ready for new job
[2026-01-09 23:07:01] 2026-01-10 04:06:24,158 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 23:07:01] 2026-01-10 04:06:24,161 | INFO     | ***************************************
[2026-01-09 23:07:01] 2026-01-10 04:06:24,161 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 23:07:01] 2026-01-10 04:06:24,161 | INFO     | ***************************************
[2026-01-09 23:07:01] 2026-01-10 04:06:24,161 | INFO     | 
[2026-01-09 23:07:01] 2026-01-10 04:06:24,166 | INFO     | architecture information:
[2026-01-09 23:07:01] 2026-01-10 04:06:24,166 | INFO     | executing command: cat /etc/os-release
[2026-01-09 23:07:01] 2026-01-10 04:06:24,184 | INFO     | cat /etc/os-release:
[2026-01-09 23:07:01] NAME="CentOS Linux"
[2026-01-09 23:07:01] VERSION="7 (Core)"
[2026-01-09 23:07:01] ID="centos"
[2026-01-09 23:07:01] ID_LIKE="rhel fedora"
[2026-01-09 23:07:01] VERSION_ID="7"
[2026-01-09 23:07:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 23:07:01] ANSI_COLOR="0;31"
[2026-01-09 23:07:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 23:07:01] HOME_URL="https://www.centos.org/"
[2026-01-09 23:07:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 23:07:01] 
[2026-01-09 23:07:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 23:07:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 23:07:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 23:07:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 23:07:01] 
[2026-01-09 23:07:01] 2026-01-10 04:06:24,185 | INFO     | ***************************************
[2026-01-09 23:07:01] 2026-01-10 04:06:24,688 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-09 23:07:01] 2026-01-10 04:06:24,706 | INFO     | sufficient remaining disk space (129777008640 B)
[2026-01-09 23:07:01] 2026-01-10 04:06:24,706 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 23:07:01] 2026-01-10 04:06:24,707 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 23:07:01] 2026-01-10 04:06:24,707 | INFO     | update_server=False
[2026-01-09 23:07:01] 2026-01-10 04:06:24,707 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 23:07:01] 2026-01-10 04:06:24,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 23:07:01] 2026-01-10 04:06:24,760 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:07:01] 2026-01-10 04:06:24,761 | INFO     | aborting loop
[2026-01-09 23:07:01] 2026-01-10 04:06:24,900 | INFO     | all job control threads have been joined
[2026-01-09 23:07:01] 2026-01-10 04:06:24,982 | INFO     | all data control threads have been joined
[2026-01-09 23:07:01] 2026-01-10 04:06:25,085 | INFO     | all payload control threads have been joined
[2026-01-09 23:07:01] 2026-01-10 04:06:25,711 | INFO     | [job] retrieve thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:25,765 | INFO     | [job] job monitor thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:25,789 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:25,906 | INFO     | [job] control thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:25,987 | INFO     | [data] control thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:25,990 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 23:07:01] 2026-01-10 04:06:26,090 | INFO     | [payload] control thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:26,326 | INFO     | [data] copytool_in thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:26,369 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:26,618 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:26,925 | INFO     | [payload] failed_post thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:26,976 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:27,013 | INFO     | [payload] validate_post thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:27,068 | INFO     | [job] validate thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:27,366 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 23:07:01] 2026-01-10 04:06:27,996 | INFO     | [data] copytool_out thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:28,371 | INFO     | [job] queue monitor thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:28,715 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 23:07:01] 2026-01-10 04:06:54,190 | INFO     | [monitor] cgroup control has ended
[2026-01-09 23:07:01] 2026-01-10 04:06:54,750 | INFO     | PID=897813 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-09 23:07:01] 2026-01-10 04:06:54,751 | INFO     | .. there are 20 such processes running
[2026-01-09 23:07:01] 2026-01-10 04:06:54,751 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 23:07:01] 2026-01-10 04:06:54,751 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 23:07:01] 2026-01-10 04:06:54,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 23:07:01] 2026-01-10 04:06:55,667 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139845877073728)>', '<ExcThread(monitor, started 139845536048896)>']
[2026-01-09 23:07:01] 2026-01-10 04:06:55,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 23:07:01] 2026-01-10 04:06:55,757 | INFO     | [monitor] control thread has ended
[2026-01-09 23:07:01] 2026-01-10 04:07:00,691 | INFO     | all workflow threads have been joined
[2026-01-09 23:07:01] 2026-01-10 04:07:00,692 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 23:07:01] 2026-01-10 04:07:00,692 | INFO     | traces error code: 0
[2026-01-09 23:07:01] 2026-01-10 04:07:00,693 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 23:07:01] 2026-01-10 04:07:00,819 [wrapper] ==== pilot stdout END ====
[2026-01-09 23:07:01] 2026-01-10 04:07:00,822 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 23:07:01] 2026-01-10 04:07:00,825 [wrapper] pilotpid: 897813
[2026-01-09 23:07:01] 2026-01-10 04:07:00,829 [wrapper] Pilot exit status: 0
[2026-01-09 23:07:01] 2026-01-10 04:07:00,840 [wrapper] pandaids: 6962018568
[2026-01-09 23:07:01] 2026-01-10 04:07:00,951 [wrapper] cleanup supervisor_pilot 1689698 897814
[2026-01-09 23:07:01] 2026-01-10 04:07:00,957 [wrapper] Test setup, not cleaning
[2026-01-09 23:07:01] 2026-01-10 04:07:00,960 [wrapper] apfmon messages muted
[2026-01-09 23:07:01] 2026-01-10 04:07:00,963 [wrapper] ==== wrapper stdout END ====
[2026-01-09 23:07:01] 2026-01-10 04:07:00,966 [wrapper] ==== wrapper stderr END ====
[2026-01-09 23:07:01]  *** Error codes and diagnostics ***
[2026-01-09 23:07:01]     "exeErrorCode": 0,
[2026-01-09 23:07:01]     "exeErrorDiag": "",
[2026-01-09 23:07:01]     "pilotErrorCode": 0,
[2026-01-09 23:07:01]     "pilotErrorDiag": "",
[2026-01-09 23:07:01]  *** Listing of results directory ***
[2026-01-09 23:07:01] total 440572
[2026-01-09 23:07:01] -rw-r--r--. 1 boincer umatlas    579449 Jan  7 10:25 pilot3.tar.gz
[2026-01-09 23:07:01] -rwx------. 1 boincer umatlas     36322 Jan  7 10:35 runpilot2-wrapper.sh
[2026-01-09 23:07:01] -rw-r--r--. 1 boincer umatlas      5112 Jan  7 10:38 queuedata.json
[2026-01-09 23:07:01] -rw-r--r--. 1 boincer umatlas       100 Jan  9 20:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 23:07:01] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 20:46 run_atlas
[2026-01-09 23:07:01] -rw-r--r--. 1 boincer umatlas       105 Jan  9 20:46 job.xml
[2026-01-09 23:07:01] -rw-r--r--. 2 boincer umatlas 226543628 Jan  9 20:46 EVNT.47898824._000529.pool.root.1
[2026-01-09 23:07:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:46 start_atlas.sh
[2026-01-09 23:07:01] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 20:46 shared
[2026-01-09 23:07:01] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 20:46 input.tar.gz
[2026-01-09 23:07:01] -rw-r--r--. 1 boincer umatlas         0 Jan  9 20:46 boinc_lockfile
[2026-01-09 23:07:01] -rw-r--r--. 1 boincer umatlas      2516 Jan  9 20:46 pandaJob.out
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas        57 Jan  9 20:46 setup.sh.local
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas    989382 Jan  9 20:46 agis_schedconf.cvmfs.json
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas   1516240 Jan  9 20:46 agis_ddmendpoints.agis.ALL.json
[2026-01-09 23:07:01] drwx------. 5 boincer umatlas      4096 Jan  9 20:46 pilot3
[2026-01-09 23:07:01] -rw-r--r--. 1 boincer umatlas      6957 Jan  9 23:04 init_data.xml
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas 217553155 Jan  9 23:05 HITS.47898826._010384.pool.root.1
[2026-01-09 23:07:01] -rw-r--r--. 1 boincer umatlas       529 Jan  9 23:05 boinc_task_state.xml
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas        95 Jan  9 23:06 pilot_heartbeat.json
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas      1034 Jan  9 23:06 memory_monitor_summary.json
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas    386351 Jan  9 23:06 log.47898826._010384.job.log.tgz.1
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas      7771 Jan  9 23:06 heartbeat.json
[2026-01-09 23:07:01] -rw-r--r--. 1 boincer umatlas        27 Jan  9 23:06 wrapper_checkpoint.txt
[2026-01-09 23:07:01] -rw-r--r--. 1 boincer umatlas      8192 Jan  9 23:06 boinc_mmap_file
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas      4824 Jan  9 23:07 pilotlog.txt
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas   1178567 Jan  9 23:07 log.47898826._010384.job.log.1
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas       357 Jan  9 23:07 output.list
[2026-01-09 23:07:01] -rw-r--r--. 1 boincer umatlas       620 Jan  9 23:07 runtime_log
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas   1587200 Jan  9 23:07 result.tar.gz
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas       653 Jan  9 23:07 XtoKDmTkkx8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmgLdKDmiG19tm.diag
[2026-01-09 23:07:01] -rw-r--r--. 1 boincer umatlas      9342 Jan  9 23:07 runtime_log.err
[2026-01-09 23:07:01] -rw-r--r--. 1 boincer umatlas     21422 Jan  9 23:07 stderr.txt
[2026-01-09 23:07:01] HITS file was successfully produced:
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas 217553155 Jan  9 23:05 shared/HITS.pool.root.1
[2026-01-09 23:07:01]  *** Contents of shared directory: ***
[2026-01-09 23:07:01] total 435844
[2026-01-09 23:07:01] -rw-r--r--. 2 boincer umatlas 226543628 Jan  9 20:46 ATLAS.root_0
[2026-01-09 23:07:01] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 20:46 start_atlas.sh
[2026-01-09 23:07:01] -rw-r--r--. 2 boincer umatlas    592396 Jan  9 20:46 input.tar.gz
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas 217553155 Jan  9 23:05 HITS.pool.root.1
[2026-01-09 23:07:01] -rw-------. 1 boincer umatlas   1587200 Jan  9 23:07 result.tar.gz
23:07:02 (892697): run_atlas exited; CPU time 42228.819824
23:07:02 (892697): called boinc_finish(0)

</stderr_txt>
]]>

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