Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:32:08 (29212): wrapper (7.7.26015): starting
17:32:08 (29212): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 17:32:08] Arguments: --nthreads 8
[2026-01-09 17:32:08] Threads: 8
[2026-01-09 17:32:08] Checking for CVMFS
[2026-01-09 17:32:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 17:32:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 17:32:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 17:32:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 17:32:08] 2.11.2.0 2888 112828 112028 154959 1 56 13260201 20275200 1 130560 0 23830878 99.775 7674003 32391 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 17:32:08] CVMFS is ok
[2026-01-09 17:32:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 17:32:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 17:32:08] Further information can be found at the LHC@home message board.
[2026-01-09 17:32:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 17:32:08] Checking for apptainer binary...
[2026-01-09 17:32:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 17:32:08] Running /usr/bin/apptainer --version
[2026-01-09 17:32:08] apptainer version 1.3.2-1.el7
[2026-01-09 17:32:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 17:32:10] c-204-6.aglt2.org
[2026-01-09 17:32:10] apptainer works
[2026-01-09 17:32:10] Set ATHENA_PROC_NUMBER=8
[2026-01-09 17:32:10] Set ATHENA_CORE_NUMBER=8
[2026-01-09 17:32:10] Starting ATLAS job with PandaID=6962016387
[2026-01-09 17:32:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-09 20:36:52]  *** The last 200 lines of the pilot log: ***
[2026-01-09 20:36:52] 2026-01-10 01:36:06,453 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:36:52] 2026-01-10 01:36:06,982 | INFO     | time since job start (11018s) is within the limit (174528.0s)
[2026-01-09 20:36:52] 2026-01-10 01:36:08,956 | INFO     | monitor loop #813: job 0:6962016387 is in state 'finished'
[2026-01-09 20:36:52] 2026-01-10 01:36:08,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:36:52] 2026-01-10 01:36:08,988 | INFO     | time since job start (11020s) is within the limit (174528.0s)
[2026-01-09 20:36:52] 2026-01-10 01:36:10,993 | INFO     | time since job start (11022s) is within the limit (174528.0s)
[2026-01-09 20:36:52] 2026-01-10 01:36:11,459 | INFO     | monitor loop #814: job 0:6962016387 is in state 'finished'
[2026-01-09 20:36:52] 2026-01-10 01:36:11,459 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-09 20:36:52] 2026-01-10 01:36:11,929 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-09 20:36:52] 2026-01-10 01:36:11,933 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2026-01-09 20:36:52] 2026-01-10 01:36:11,935 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6962016387/memory_monitor_summary.json (trf name=prmon)
[2026-01-09 20:36:52] 2026-01-10 01:36:11,936 | INFO     | extracted standard info from prmon json
[2026-01-09 20:36:52] 2026-01-10 01:36:11,936 | INFO     | extracted standard memory fields from prmon json
[2026-01-09 20:36:52] 2026-01-10 01:36:11,937 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-09 20:36:52] 2026-01-10 01:36:11,937 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-09 20:36:52] 2026-01-10 01:36:11,937 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-09 20:36:52] 2026-01-10 01:36:11,941 | INFO     | fitting pss+swap vs Time
[2026-01-09 20:36:52] 2026-01-10 01:36:11,942 | INFO     | sum of square deviations: 1808350185.0
[2026-01-09 20:36:52] 2026-01-10 01:36:11,943 | INFO     | sum of deviations: -1141596028.999999
[2026-01-09 20:36:52] 2026-01-10 01:36:11,943 | INFO     | mean x: 1768003439.5
[2026-01-09 20:36:52] 2026-01-10 01:36:11,943 | INFO     | mean y: 2535781.933333333
[2026-01-09 20:36:52] 2026-01-10 01:36:11,943 | INFO     | intersect: 1118661255.0487852
[2026-01-09 20:36:52] 2026-01-10 01:36:11,943 | INFO     | chi2: 1.6324941421040295
[2026-01-09 20:36:52] 2026-01-10 01:36:11,944 | INFO     | sum of square deviations: 1661798600.0
[2026-01-09 20:36:52] 2026-01-10 01:36:11,945 | INFO     | sum of deviations: -1043350649.0000019
[2026-01-09 20:36:52] 2026-01-10 01:36:11,945 | INFO     | mean x: 1768003287.0
[2026-01-09 20:36:52] 2026-01-10 01:36:11,945 | INFO     | mean y: 2535884.2
[2026-01-09 20:36:52] 2026-01-10 01:36:11,945 | INFO     | intersect: 1112566532.2734709
[2026-01-09 20:36:52] 2026-01-10 01:36:11,946 | INFO     | chi2: 1.6325087683244144
[2026-01-09 20:36:52] 2026-01-10 01:36:11,946 | INFO     | current chi2=1.6325087683244144 (change=-0.0008959432078566704 %)
[2026-01-09 20:36:52] 2026-01-10 01:36:11,946 | INFO     | right removable region: 174
[2026-01-09 20:36:52] 2026-01-10 01:36:11,946 | INFO     | sum of square deviations: 1661798600.0
[2026-01-09 20:36:52] 2026-01-10 01:36:11,947 | INFO     | sum of deviations: -28265411216.99999
[2026-01-09 20:36:52] 2026-01-10 01:36:11,947 | INFO     | mean x: 1768003592.0
[2026-01-09 20:36:52] 2026-01-10 01:36:11,947 | INFO     | mean y: 2563638.7714285715
[2026-01-09 20:36:52] 2026-01-10 01:36:11,947 | INFO     | intersect: 30074407820.739735
[2026-01-09 20:36:52] 2026-01-10 01:36:11,948 | INFO     | chi2: 0.17510981683145418
[2026-01-09 20:36:52] 2026-01-10 01:36:11,948 | INFO     | current chi2=0.17510981683145418 (change=89.27347962144813 %)
[2026-01-09 20:36:52] 2026-01-10 01:36:11,948 | INFO     | sum of square deviations: 1523386702.5
[2026-01-09 20:36:52] 2026-01-10 01:36:11,949 | INFO     | sum of deviations: -29059070901.5
[2026-01-09 20:36:52] 2026-01-10 01:36:11,949 | INFO     | mean x: 1768003744.5
[2026-01-09 20:36:52] 2026-01-10 01:36:11,949 | INFO     | mean y: 2564457.7
[2026-01-09 20:36:52] 2026-01-10 01:36:11,949 | INFO     | intersect: 33727780833.312283
[2026-01-09 20:36:52] 2026-01-10 01:36:11,950 | INFO     | chi2: 0.1512872411668639
[2026-01-09 20:36:52] 2026-01-10 01:36:11,950 | INFO     | current chi2=0.1512872411668639 (change=13.604363305068082 %)
[2026-01-09 20:36:52] 2026-01-10 01:36:11,950 | INFO     | left removable region: 20
[2026-01-09 20:36:52] 2026-01-10 01:36:11,950 | INFO     | sum of square deviations: 1132458442.5
[2026-01-09 20:36:52] 2026-01-10 01:36:11,951 | INFO     | sum of deviations: -17833820035.499996
[2026-01-09 20:36:52] 2026-01-10 01:36:11,951 | INFO     | mean x: 1768003866.5
[2026-01-09 20:36:52] 2026-01-10 01:36:11,951 | INFO     | mean y: 2552332.487012987
[2026-01-09 20:36:52] 2026-01-10 01:36:11,951 | INFO     | intersect: 27844865651.837948
[2026-01-09 20:36:52] 2026-01-10 01:36:11,952 | INFO     | chi2: 0.1258927529022621
[2026-01-09 20:36:52] 2026-01-10 01:36:11,952 | INFO     | current memory leak: -15.75 B/s (using 154 data points, chi2=0.13)
[2026-01-09 20:36:52] 2026-01-10 01:36:11,952 | INFO     | could have reported an average CPU frequency of 2017 MHz (9 samples)
[2026-01-09 20:36:52] 2026-01-10 01:36:11,952 | INFO     | ..............................
[2026-01-09 20:36:52] 2026-01-10 01:36:11,953 | INFO     | . Timing measurements:
[2026-01-09 20:36:52] 2026-01-10 01:36:11,953 | INFO     | . get job = 0 s
[2026-01-09 20:36:52] 2026-01-10 01:36:11,953 | INFO     | . initial setup = 2 s
[2026-01-09 20:36:52] 2026-01-10 01:36:11,953 | INFO     | . payload setup = 8 s
[2026-01-09 20:36:52] 2026-01-10 01:36:11,953 | INFO     | . stage-in = 0 s
[2026-01-09 20:36:52] 2026-01-10 01:36:11,953 | INFO     | . payload execution = 10983 s
[2026-01-09 20:36:52] 2026-01-10 01:36:11,953 | INFO     | . stage-out = 2 s
[2026-01-09 20:36:52] 2026-01-10 01:36:11,953 | INFO     | . log creation = 0 s
[2026-01-09 20:36:52] 2026-01-10 01:36:11,954 | INFO     | ..............................
[2026-01-09 20:36:52] 2026-01-10 01:36:12,047 | INFO     | 
[2026-01-09 20:36:52] 2026-01-10 01:36:12,047 | INFO     | job summary report
[2026-01-09 20:36:52] 2026-01-10 01:36:12,047 | INFO     | --------------------------------------------------
[2026-01-09 20:36:52] 2026-01-10 01:36:12,048 | INFO     | PanDA job id: 6962016387
[2026-01-09 20:36:52] 2026-01-10 01:36:12,048 | INFO     | task id: 47898826
[2026-01-09 20:36:52] 2026-01-10 01:36:12,048 | INFO     | errors: (none)
[2026-01-09 20:36:52] 2026-01-10 01:36:12,048 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-09 20:36:52] 2026-01-10 01:36:12,048 | INFO     | pilot state: finished 
[2026-01-09 20:36:52] 2026-01-10 01:36:12,048 | INFO     | transexitcode: 0
[2026-01-09 20:36:52] 2026-01-10 01:36:12,049 | INFO     | exeerrorcode: 0
[2026-01-09 20:36:52] 2026-01-10 01:36:12,049 | INFO     | exeerrordiag: 
[2026-01-09 20:36:52] 2026-01-10 01:36:12,049 | INFO     | exitcode: 0
[2026-01-09 20:36:52] 2026-01-10 01:36:12,049 | INFO     | exitmsg: OK
[2026-01-09 20:36:52] 2026-01-10 01:36:12,049 | INFO     | cpuconsumptiontime: 82385 s
[2026-01-09 20:36:52] 2026-01-10 01:36:12,049 | INFO     | nevents: 400
[2026-01-09 20:36:52] 2026-01-10 01:36:12,050 | INFO     | neventsw: 0
[2026-01-09 20:36:52] 2026-01-10 01:36:12,050 | INFO     | pid: 7048
[2026-01-09 20:36:52] 2026-01-10 01:36:12,050 | INFO     | pgrp: 7048
[2026-01-09 20:36:52] 2026-01-10 01:36:12,050 | INFO     | corecount: 8
[2026-01-09 20:36:52] 2026-01-10 01:36:12,050 | INFO     | event service: False
[2026-01-09 20:36:52] 2026-01-10 01:36:12,050 | INFO     | sizes: {0: 2283964, 6: 2284226, 11: 2284254, 10996: 2313306, 10999: 2322360, 11006: 2322562}
[2026-01-09 20:36:52] 2026-01-10 01:36:12,051 | INFO     | --------------------------------------------------
[2026-01-09 20:36:52] 2026-01-10 01:36:12,051 | INFO     | 
[2026-01-09 20:36:52] 2026-01-10 01:36:12,051 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-09 20:36:52] 2026-01-10 01:36:12,081 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,082 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,082 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,082 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,083 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,083 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,083 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,083 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,083 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,084 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,084 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,084 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,084 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,084 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,085 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,085 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,085 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-09 20:36:52] 2026-01-10 01:36:12,085 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,085 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-09 20:36:52] 2026-01-10 01:36:12,086 | INFO     | job 6962016387 has completed (purged errors)
[2026-01-09 20:36:52] 2026-01-10 01:36:12,086 | INFO     | overall cleanup function is called
[2026-01-09 20:36:52] 2026-01-10 01:36:13,094 | INFO     | --- collectZombieJob: --- 10, [7048]
[2026-01-09 20:36:52] 2026-01-10 01:36:13,094 | INFO     | zombie collector waiting for pid 7048
[2026-01-09 20:36:52] 2026-01-10 01:36:13,100 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-09 20:36:52] 2026-01-10 01:36:13,100 | INFO     | collected zombie processes
[2026-01-09 20:36:52] 2026-01-10 01:36:13,100 | INFO     | will attempt to kill all subprocesses of pid=7048
[2026-01-09 20:36:52] 2026-01-10 01:36:13,192 | INFO     | process IDs to be killed: [7048] (in reverse order)
[2026-01-09 20:36:52] 2026-01-10 01:36:13,253 | WARNING  | found no corresponding commands to process id(s)
[2026-01-09 20:36:52] 2026-01-10 01:36:13,254 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-09 20:36:52] 2026-01-10 01:36:13,258 | INFO     | did not find any defunct processes belonging to 7048
[2026-01-09 20:36:52] 2026-01-10 01:36:13,261 | INFO     | did not find any defunct processes belonging to 7048
[2026-01-09 20:36:52] 2026-01-10 01:36:13,262 | INFO     | ready for new job
[2026-01-09 20:36:52] 2026-01-10 01:36:13,262 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-09 20:36:52] 2026-01-10 01:36:13,264 | INFO     | ***************************************
[2026-01-09 20:36:52] 2026-01-10 01:36:13,264 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-09 20:36:52] 2026-01-10 01:36:13,264 | INFO     | ***************************************
[2026-01-09 20:36:52] 2026-01-10 01:36:13,264 | INFO     | 
[2026-01-09 20:36:52] 2026-01-10 01:36:13,265 | INFO     | architecture information:
[2026-01-09 20:36:52] 2026-01-10 01:36:13,266 | INFO     | executing command: cat /etc/os-release
[2026-01-09 20:36:52] 2026-01-10 01:36:13,286 | INFO     | cat /etc/os-release:
[2026-01-09 20:36:52] NAME="CentOS Linux"
[2026-01-09 20:36:52] VERSION="7 (Core)"
[2026-01-09 20:36:52] ID="centos"
[2026-01-09 20:36:52] ID_LIKE="rhel fedora"
[2026-01-09 20:36:52] VERSION_ID="7"
[2026-01-09 20:36:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-09 20:36:52] ANSI_COLOR="0;31"
[2026-01-09 20:36:52] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-09 20:36:52] HOME_URL="https://www.centos.org/"
[2026-01-09 20:36:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-09 20:36:52] 
[2026-01-09 20:36:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-09 20:36:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-09 20:36:52] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-09 20:36:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-09 20:36:52] 
[2026-01-09 20:36:52] 2026-01-10 01:36:13,286 | INFO     | ***************************************
[2026-01-09 20:36:52] 2026-01-10 01:36:13,790 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-09 20:36:52] 2026-01-10 01:36:13,811 | INFO     | sufficient remaining disk space (18526240768 B)
[2026-01-09 20:36:52] 2026-01-10 01:36:13,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-09 20:36:52] 2026-01-10 01:36:13,812 | INFO     | current server update state: UPDATING_FINAL
[2026-01-09 20:36:52] 2026-01-10 01:36:13,812 | INFO     | update_server=False
[2026-01-09 20:36:52] 2026-01-10 01:36:13,812 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-09 20:36:52] 2026-01-10 01:36:13,812 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-09 20:36:52] 2026-01-10 01:36:13,813 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:36:52] 2026-01-10 01:36:13,963 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-09 20:36:52] 2026-01-10 01:36:13,963 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-09 20:36:52] 2026-01-10 01:36:13,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-09 20:36:52] 2026-01-10 01:36:13,963 | INFO     | will abort loop
[2026-01-09 20:36:52] 2026-01-10 01:36:14,175 | INFO     | all data control threads have been joined
[2026-01-09 20:36:52] 2026-01-10 01:36:14,818 | INFO     | [job] retrieve thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:14,818 | INFO     | [job] queue monitor thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:14,873 | INFO     | [data] copytool_in thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:14,879 | INFO     | [payload] execute_payloads thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:14,883 | INFO     | [job] create_data_payload thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:14,959 | INFO     | all job control threads have been joined
[2026-01-09 20:36:52] 2026-01-10 01:36:14,969 | INFO     | [job] job monitor thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:15,170 | INFO     | all payload control threads have been joined
[2026-01-09 20:36:52] 2026-01-10 01:36:15,181 | INFO     | [data] control thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:15,184 | INFO     | [payload] validate_pre thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:15,252 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:15,331 | INFO     | [payload] failed_post thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:15,818 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-09 20:36:52] 2026-01-10 01:36:15,818 | INFO     | [data] copytool_out thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:15,964 | INFO     | [job] control thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:15,977 | INFO     | [payload] validate_post thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:16,001 | INFO     | [job] validate thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:16,175 | INFO     | [payload] control thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:19,824 | INFO     | [data] queue_monitor thread has finished
[2026-01-09 20:36:52] 2026-01-10 01:36:44,220 | INFO     | PID=507 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-09 20:36:52] 2026-01-10 01:36:44,221 | INFO     | found 0 job(s) in 20 queues
[2026-01-09 20:36:52] 2026-01-10 01:36:44,221 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-09 20:36:52] 2026-01-10 01:36:44,221 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-09 20:36:52] 2026-01-10 01:36:45,927 | INFO     | [monitor] cgroup control has ended
[2026-01-09 20:36:52] 2026-01-10 01:36:47,110 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139626840676160)>', '<ExcThread(monitor, started 139625997776640)>']
[2026-01-09 20:36:52] 2026-01-10 01:36:47,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-09 20:36:52] 2026-01-10 01:36:47,233 | INFO     | [monitor] control thread has ended
[2026-01-09 20:36:52] 2026-01-10 01:36:52,135 | INFO     | all workflow threads have been joined
[2026-01-09 20:36:52] 2026-01-10 01:36:52,135 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-09 20:36:52] 2026-01-10 01:36:52,136 | INFO     | traces error code: 0
[2026-01-09 20:36:52] 2026-01-10 01:36:52,136 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-09 20:36:52] 2026-01-10 01:36:52,255 [wrapper] ==== pilot stdout END ====
[2026-01-09 20:36:52] 2026-01-10 01:36:52,260 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-09 20:36:52] 2026-01-10 01:36:52,265 [wrapper] pilotpid: 507
[2026-01-09 20:36:52] 2026-01-10 01:36:52,270 [wrapper] Pilot exit status: 0
[2026-01-09 20:36:52] 2026-01-10 01:36:52,290 [wrapper] pandaids: 6962016387
[2026-01-09 20:36:52] 2026-01-10 01:36:52,335 [wrapper] cleanup supervisor_pilot 23689 508
[2026-01-09 20:36:52] 2026-01-10 01:36:52,340 [wrapper] Test setup, not cleaning
[2026-01-09 20:36:52] 2026-01-10 01:36:52,345 [wrapper] apfmon messages muted
[2026-01-09 20:36:52] 2026-01-10 01:36:52,351 [wrapper] ==== wrapper stdout END ====
[2026-01-09 20:36:52] 2026-01-10 01:36:52,356 [wrapper] ==== wrapper stderr END ====
[2026-01-09 20:36:52]  *** Error codes and diagnostics ***
[2026-01-09 20:36:52]     "exeErrorCode": 0,
[2026-01-09 20:36:52]     "exeErrorDiag": "",
[2026-01-09 20:36:52]     "pilotErrorCode": 0,
[2026-01-09 20:36:52]     "pilotErrorDiag": "",
[2026-01-09 20:36:52]  *** Listing of results directory ***
[2026-01-09 20:36:52] total 445912
[2026-01-09 20:36:52] -rw-r--r-- 1 boincer umatlas    579449 Jan  7 10:25 pilot3.tar.gz
[2026-01-09 20:36:52] -rwx------ 1 boincer umatlas     36322 Jan  7 10:31 runpilot2-wrapper.sh
[2026-01-09 20:36:52] -rw-r--r-- 1 boincer umatlas      5112 Jan  7 10:33 queuedata.json
[2026-01-09 20:36:52] -rw-r--r-- 1 boincer umatlas       100 Jan  9 17:32 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-09 20:36:52] -rwxr-xr-x 1 boincer umatlas      7986 Jan  9 17:32 run_atlas
[2026-01-09 20:36:52] -rw-r--r-- 1 boincer umatlas       105 Jan  9 17:32 job.xml
[2026-01-09 20:36:52] -rw-r--r-- 2 boincer umatlas 225446134 Jan  9 17:32 EVNT.47898824._000414.pool.root.1
[2026-01-09 20:36:52] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 17:32 start_atlas.sh
[2026-01-09 20:36:52] drwxrwx--x 2 boincer umatlas      4096 Jan  9 17:32 shared
[2026-01-09 20:36:52] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 17:32 input.tar.gz
[2026-01-09 20:36:52] -rw-r--r-- 1 boincer umatlas         0 Jan  9 17:32 boinc_lockfile
[2026-01-09 20:36:52] -rw-r--r-- 1 boincer umatlas      2516 Jan  9 17:32 pandaJob.out
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas        57 Jan  9 17:32 setup.sh.local
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas    989375 Jan  9 17:32 agis_schedconf.cvmfs.json
[2026-01-09 20:36:52] drwx------ 5 boincer umatlas      4096 Jan  9 17:32 pilot3
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas 223338599 Jan  9 20:35 HITS.47898826._009180.pool.root.1
[2026-01-09 20:36:52] -rw-r--r-- 1 boincer umatlas       530 Jan  9 20:35 boinc_task_state.xml
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas      1048 Jan  9 20:35 memory_monitor_summary.json
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas   1516240 Jan  9 20:36 agis_ddmendpoints.agis.ALL.json
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas    430708 Jan  9 20:36 log.47898826._009180.job.log.tgz.1
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas        95 Jan  9 20:36 pilot_heartbeat.json
[2026-01-09 20:36:52] -rw-r--r-- 1 boincer umatlas      5910 Jan  9 20:36 init_data.xml
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas      7846 Jan  9 20:36 heartbeat.json
[2026-01-09 20:36:52] -rw-r--r-- 1 boincer umatlas      8192 Jan  9 20:36 boinc_mmap_file
[2026-01-09 20:36:52] -rw-r--r-- 1 boincer umatlas        28 Jan  9 20:36 wrapper_checkpoint.txt
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas      4930 Jan  9 20:36 pilotlog.txt
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas   1522944 Jan  9 20:36 log.47898826._009180.job.log.1
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas       357 Jan  9 20:36 output.list
[2026-01-09 20:36:52] -rw-r--r-- 1 boincer umatlas       620 Jan  9 20:36 runtime_log
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas   1976320 Jan  9 20:36 result.tar.gz
[2026-01-09 20:36:52] -rw-r--r-- 1 boincer umatlas      9338 Jan  9 20:36 runtime_log.err
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas       661 Jan  9 20:36 caQKDmygkx8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmHiKDmltwDkn.diag
[2026-01-09 20:36:52] -rw-r--r-- 1 boincer umatlas     21270 Jan  9 20:36 stderr.txt
[2026-01-09 20:36:52] HITS file was successfully produced:
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas 223338599 Jan  9 20:35 shared/HITS.pool.root.1
[2026-01-09 20:36:52]  *** Contents of shared directory: ***
[2026-01-09 20:36:52] total 440804
[2026-01-09 20:36:52] -rw-r--r-- 2 boincer umatlas 225446134 Jan  9 17:32 ATLAS.root_0
[2026-01-09 20:36:52] -rw-r--r-- 2 boincer umatlas     15847 Jan  9 17:32 start_atlas.sh
[2026-01-09 20:36:52] -rw-r--r-- 2 boincer umatlas    592398 Jan  9 17:32 input.tar.gz
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas 223338599 Jan  9 20:35 HITS.pool.root.1
[2026-01-09 20:36:52] -rw------- 1 boincer umatlas   1976320 Jan  9 20:36 result.tar.gz
20:36:54 (29212): run_atlas exited; CPU time 82354.303396
20:36:54 (29212): called boinc_finish(0)

</stderr_txt>
]]>

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