Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:45:17 (1446649): wrapper (7.7.26015): starting
01:45:17 (1446649): wrapper: running run_atlas (--nthreads 3)
[2026-01-11 01:45:17] Arguments: --nthreads 3
[2026-01-11 01:45:17] Threads: 3
[2026-01-11 01:45:17] Checking for CVMFS
[2026-01-11 01:45:17] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-11 01:45:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-11 01:45:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-11 01:45:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-11 01:45:17] 2.9.2.0 601830 3590 89768 154998 0 57 24146590 36864001 0 130560 0 1925987 99.986 127622 3265 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-11 01:45:17] CVMFS is ok
[2026-01-11 01:45:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-11 01:45:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-11 01:45:17] Further information can be found at the LHC@home message board.
[2026-01-11 01:45:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-11 01:45:17] Checking for apptainer binary...
[2026-01-11 01:45:17] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-11 01:45:17] Running /usr/bin/apptainer --version
[2026-01-11 01:45:17] apptainer version 1.4.1-1.1
[2026-01-11 01:45:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-11 01:45:17] thA323
[2026-01-11 01:45:17] apptainer works
[2026-01-11 01:45:17] Set ATHENA_PROC_NUMBER=3
[2026-01-11 01:45:17] Set ATHENA_CORE_NUMBER=3
[2026-01-11 01:45:17] Starting ATLAS job with PandaID=6962917880
[2026-01-11 01:45:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-11 03:38:37]  *** The last 200 lines of the pilot log: ***
[2026-01-11 03:38:37] 2026-01-11 02:37:33,094 | INFO     | will abort loop
[2026-01-11 03:38:37] 2026-01-11 02:37:33,466 | INFO     | all job control threads have been joined
[2026-01-11 03:38:37] 2026-01-11 02:37:33,764 | INFO     | all data control threads have been joined
[2026-01-11 03:38:37] 2026-01-11 02:37:33,831 | INFO     | [job] queue monitor thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:37:33,832 | INFO     | [job] retrieve thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:37:34,070 | INFO     | all payload control threads have been joined
[2026-01-11 03:38:37] 2026-01-11 02:37:34,097 | INFO     | [payload] validate_post thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:37:34,097 | INFO     | [job] job monitor thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:37:34,172 | INFO     | [payload] failed_post thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:37:34,472 | INFO     | [job] control thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:37:34,707 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-11 03:38:37] 2026-01-11 02:37:34,770 | INFO     | [data] control thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:37:34,868 | INFO     | [data] copytool_out thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:37:34,868 | INFO     | [payload] execute_payloads thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:37:34,896 | INFO     | [data] copytool_in thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:37:34,930 | INFO     | [job] validate thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:37:34,985 | INFO     | [job] create_data_payload thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:37:35,076 | INFO     | [payload] control thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:37:35,088 | INFO     | [payload] validate_pre thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:37:38,714 | INFO     | [data] queue_monitor thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:37:43,013 | INFO     | job.realtimelogging is not enabled
[2026-01-11 03:38:37] 2026-01-11 02:37:44,019 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-11 03:38:37] 2026-01-11 02:38:03,681 | INFO     | PID=1450377 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-11 03:38:37] 2026-01-11 02:38:03,681 | INFO     | found 0 job(s) in 20 queues
[2026-01-11 03:38:37] 2026-01-11 02:38:03,681 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-11 03:38:37] 2026-01-11 02:38:03,681 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-11 03:38:37] 2026-01-11 02:38:31,465 | INFO     | [monitor] cgroup control has ended
[2026-01-11 03:38:37] 2026-01-11 02:38:32,010 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140422047057728)>', '<ExcThread(monitor, started 140421321709312)>']
[2026-01-11 03:38:37] 2026-01-11 02:38:32,830 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-11 03:38:37] 2026-01-11 02:38:32,831 | INFO     | [monitor] control thread has ended
[2026-01-11 03:38:37] 2026-01-11 02:38:37,024 | INFO     | all workflow threads have been joined
[2026-01-11 03:38:37] 2026-01-11 02:38:37,025 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-11 03:38:37] 2026-01-11 02:38:37,025 | INFO     | traces error code: 0
[2026-01-11 03:38:37] 2026-01-11 02:38:37,025 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-11 03:38:37] 2026-01-11 02:38:37,076 [wrapper] ==== pilot stdout END ====
[2026-01-11 03:38:37] 2026-01-11 02:38:37,079 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-11 03:38:37] 2026-01-11 02:38:37,081 [wrapper] pilotpid: 1450377
[2026-01-11 03:38:37] 2026-01-11 02:38:37,084 [wrapper] Pilot exit status: 0
[2026-01-11 03:38:37] 2026-01-11 02:38:37,092 [wrapper] pandaids: 6962917880
[2026-01-11 03:38:37] 2026-01-11 02:38:37,115 [wrapper] cleanup supervisor_pilot 1474752 1450378
[2026-01-11 03:38:37] 2026-01-11 02:38:37,117 [wrapper] Test setup, not cleaning
[2026-01-11 03:38:37] 2026-01-11 02:38:37,120 [wrapper] apfmon messages muted
[2026-01-11 03:38:37] 2026-01-11 02:38:37,123 [wrapper] ==== wrapper stdout END ====
[2026-01-11 03:38:37] 2026-01-11 02:38:37,125 [wrapper] ==== wrapper stderr END ====
[2026-01-11 03:38:37]  *** Error codes and diagnostics ***
[2026-01-11 03:38:37]     "exeErrorCode": 0,
[2026-01-11 03:38:37]     "exeErrorDiag": "",
[2026-01-11 03:38:37]     "pilotErrorCode": 0,
[2026-01-11 03:38:37]     "pilotErrorDiag": "",
[2026-01-11 03:38:37]  *** Listing of results directory ***
[2026-01-11 03:38:37] total 435964
[2026-01-11 03:38:37] -rw-r--r-- 1 boinc boinc    579449 Jan  8 08:56 pilot3.tar.gz
[2026-01-11 03:38:37] -rwx------ 1 boinc boinc     36322 Jan  8 09:04 runpilot2-wrapper.sh
[2026-01-11 03:38:37] -rw-r--r-- 1 boinc boinc      5112 Jan  8 09:07 queuedata.json
[2026-01-11 03:38:37] -rw-r--r-- 1 boinc boinc       100 Jan 11 01:45 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-11 03:38:37] -rwxr-xr-x 1 boinc boinc      7986 Jan 11 01:45 run_atlas
[2026-01-11 03:38:37] -rw-r--r-- 1 boinc boinc       105 Jan 11 01:45 job.xml
[2026-01-11 03:38:37] -rw-r--r-- 2 boinc boinc 224093670 Jan 11 01:45 EVNT.47898824._000661.pool.root.1
[2026-01-11 03:38:37] -rw-r--r-- 2 boinc boinc    592397 Jan 11 01:45 input.tar.gz
[2026-01-11 03:38:37] -rw-r--r-- 2 boinc boinc     15847 Jan 11 01:45 start_atlas.sh
[2026-01-11 03:38:37] drwxrwx--x 2 boinc boinc      4096 Jan 11 01:45 shared
[2026-01-11 03:38:37] -rw-r--r-- 1 boinc boinc         0 Jan 11 01:45 boinc_setup_complete
[2026-01-11 03:38:37] -rw-r--r-- 1 boinc boinc      6446 Jan 11 01:45 init_data.xml
[2026-01-11 03:38:37] -rw-r--r-- 1 boinc boinc         0 Jan 11 01:45 boinc_lockfile
[2026-01-11 03:38:37] -rw-r--r-- 1 boinc boinc      2519 Jan 11 01:45 pandaJob.out
[2026-01-11 03:38:37] -rw------- 1 boinc boinc    989540 Jan 11 01:45 agis_schedconf.cvmfs.json
[2026-01-11 03:38:37] -rw------- 1 boinc boinc   1516240 Jan 11 01:45 agis_ddmendpoints.agis.ALL.json
[2026-01-11 03:38:37] drwx------ 5 boinc boinc      4096 Jan 11 01:45 pilot3
[2026-01-11 03:38:37] -rw-r--r-- 1 boinc boinc       529 Jan 11 03:37 boinc_task_state.xml
[2026-01-11 03:38:37] -rw------- 1 boinc boinc 215938794 Jan 11 03:37 HITS.47898826._019960.pool.root.1
[2026-01-11 03:38:37] -rw------- 1 boinc boinc        95 Jan 11 03:37 pilot_heartbeat.json
[2026-01-11 03:38:37] -rw------- 1 boinc boinc      1016 Jan 11 03:37 memory_monitor_summary.json
[2026-01-11 03:38:37] -rw------- 1 boinc boinc    277993 Jan 11 03:37 log.47898826._019960.job.log.tgz.1
[2026-01-11 03:38:37] -rw------- 1 boinc boinc      7747 Jan 11 03:37 heartbeat.json
[2026-01-11 03:38:37] -rw-r--r-- 1 boinc boinc        27 Jan 11 03:38 wrapper_checkpoint.txt
[2026-01-11 03:38:37] -rw------- 1 boinc boinc      5010 Jan 11 03:38 pilotlog.txt
[2026-01-11 03:38:37] -rw------- 1 boinc boinc    970306 Jan 11 03:38 log.47898826._019960.job.log.1
[2026-01-11 03:38:37] -rw-r--r-- 1 boinc boinc      8192 Jan 11 03:38 boinc_mmap_file
[2026-01-11 03:38:37] -rw------- 1 boinc boinc       357 Jan 11 03:38 output.list
[2026-01-11 03:38:37] -rw-r--r-- 1 boinc boinc       620 Jan 11 03:38 runtime_log
[2026-01-11 03:38:37] -rw------- 1 boinc boinc   1269760 Jan 11 03:38 result.tar.gz
[2026-01-11 03:38:37] -rw-r--r-- 1 boinc boinc      8897 Jan 11 03:38 runtime_log.err
[2026-01-11 03:38:37] -rw------- 1 boinc boinc       659 Jan 11 03:38 PMAODmBB0x8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6UeKDmrA3V8m.diag
[2026-01-11 03:38:37] -rw-r--r-- 1 boinc boinc      6905 Jan 11 03:38 stderr.txt
[2026-01-11 03:38:37] HITS file was successfully produced:
[2026-01-11 03:38:37] -rw------- 1 boinc boinc 215938794 Jan 11 03:37 shared/HITS.pool.root.1
[2026-01-11 03:38:37]  *** Contents of shared directory: ***
[2026-01-11 03:38:37] total 431568
[2026-01-11 03:38:37] -rw-r--r-- 2 boinc boinc 224093670 Jan 11 01:45 ATLAS.root_0
[2026-01-11 03:38:37] -rw-r--r-- 2 boinc boinc    592397 Jan 11 01:45 input.tar.gz
[2026-01-11 03:38:37] -rw-r--r-- 2 boinc boinc     15847 Jan 11 01:45 start_atlas.sh
[2026-01-11 03:38:37] -rw------- 1 boinc boinc 215938794 Jan 11 03:37 HITS.pool.root.1
[2026-01-11 03:38:37] -rw------- 1 boinc boinc   1269760 Jan 11 03:38 result.tar.gz
03:38:59 (1446649): run_atlas exited; CPU time 19527.163062
03:38:59 (1446649): called boinc_finish(0)

</stderr_txt>
]]>

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