Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:11:03 (3628285): wrapper (7.7.26015): starting
18:11:03 (3628285): wrapper: running run_atlas (--nthreads 8)
[2026-01-09 18:11:03] Arguments: --nthreads 8
[2026-01-09 18:11:03] Threads: 8
[2026-01-09 18:11:03] Checking for CVMFS
[2026-01-09 18:11:03] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 18:11:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 18:11:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 18:11:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 18:11:04] 2.13.3.0 9943 21406 169884 154960 3 130 31853705 39288833 8228 16776704 0 10796472 99.583 13167770 38818 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 18:11:04] CVMFS is ok
[2026-01-09 18:11:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 18:11:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 18:11:04] Further information can be found at the LHC@home message board.
[2026-01-09 18:11:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 18:11:04] Checking for apptainer binary...
[2026-01-09 18:11:04] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 18:11:04] Running /usr/bin/apptainer --version
[2026-01-09 18:11:04] apptainer version 1.4.5-2.el9
[2026-01-09 18:11:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 18:11:04] c-210-6.aglt2.org
[2026-01-09 18:11:04] apptainer works
[2026-01-09 18:11:04] Set ATHENA_PROC_NUMBER=8
[2026-01-09 18:11:04] Set ATHENA_CORE_NUMBER=8
[2026-01-09 18:11:04] Starting ATLAS job with PandaID=6963186920
[2026-01-09 18:11:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 01:15:34]  *** The last 200 lines of the pilot log: ***
[2026-01-10 01:15:34] 2026-01-10 06:14:58,394 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-10 01:15:34] 2026-01-10 06:14:58,456 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2600.187125
[2026-01-10 01:15:34] 2026-01-10 06:14:58,482 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6963186920/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 01:15:34] 2026-01-10 06:14:58,483 | INFO     | extracted standard info from prmon json
[2026-01-10 01:15:34] 2026-01-10 06:14:58,484 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 01:15:34] 2026-01-10 06:14:58,484 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 01:15:34] 2026-01-10 06:14:58,484 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 01:15:34] 2026-01-10 06:14:58,484 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 01:15:34] 2026-01-10 06:14:58,505 | INFO     | fitting pss+swap vs Time
[2026-01-10 01:15:34] 2026-01-10 06:14:58,506 | INFO     | sum of square deviations: 22165823366.457787
[2026-01-10 01:15:34] 2026-01-10 06:14:58,526 | INFO     | sum of deviations: -11397700385.096367
[2026-01-10 01:15:34] 2026-01-10 06:14:58,526 | INFO     | mean x: 1768012952.0361445
[2026-01-10 01:15:34] 2026-01-10 06:14:58,526 | INFO     | mean y: 2550973.1397590362
[2026-01-10 01:15:34] 2026-01-10 06:14:58,527 | INFO     | intersect: 911665945.8220487
[2026-01-10 01:15:34] 2026-01-10 06:14:58,527 | INFO     | chi2: 2.342441267719911
[2026-01-10 01:15:34] 2026-01-10 06:14:58,554 | INFO     | sum of square deviations: 21374153040.41233
[2026-01-10 01:15:34] 2026-01-10 06:14:58,616 | INFO     | sum of deviations: 15872543187.022
[2026-01-10 01:15:34] 2026-01-10 06:14:58,616 | INFO     | mean x: 1768012799.5146341
[2026-01-10 01:15:34] 2026-01-10 06:14:58,616 | INFO     | mean y: 2556178.2463414636
[2026-01-10 01:15:34] 2026-01-10 06:14:58,616 | INFO     | intersect: -1310378161.769142
[2026-01-10 01:15:34] 2026-01-10 06:14:58,617 | INFO     | chi2: 1.6251832883364745
[2026-01-10 01:15:34] 2026-01-10 06:14:58,617 | INFO     | current chi2=1.6251832883364745 (change=30.620105155575672 %)
[2026-01-10 01:15:34] 2026-01-10 06:14:58,618 | INFO     | sum of square deviations: 20601703758.97784
[2026-01-10 01:15:34] 2026-01-10 06:14:58,646 | INFO     | sum of deviations: 16585812711.770384
[2026-01-10 01:15:34] 2026-01-10 06:14:58,646 | INFO     | mean x: 1768012647.0074074
[2026-01-10 01:15:34] 2026-01-10 06:14:58,684 | INFO     | mean y: 2556319.07654321
[2026-01-10 01:15:34] 2026-01-10 06:14:58,684 | INFO     | intersect: -1420817542.5404816
[2026-01-10 01:15:34] 2026-01-10 06:14:58,685 | INFO     | chi2: 1.6254771757075492
[2026-01-10 01:15:34] 2026-01-10 06:14:58,685 | INFO     | current chi2=1.6254771757075492 (change=-0.01808333701090048 %)
[2026-01-10 01:15:34] 2026-01-10 06:14:58,685 | INFO     | right removable region: 404
[2026-01-10 01:15:34] 2026-01-10 06:14:58,709 | INFO     | sum of square deviations: 21374118222.97573
[2026-01-10 01:15:34] 2026-01-10 06:14:58,739 | INFO     | sum of deviations: -83887899387.9512
[2026-01-10 01:15:34] 2026-01-10 06:14:58,739 | INFO     | mean x: 1768013104.5609756
[2026-01-10 01:15:34] 2026-01-10 06:14:58,739 | INFO     | mean y: 2564882.8780487804
[2026-01-10 01:15:34] 2026-01-10 06:14:58,739 | INFO     | intersect: 6941560161.408972
[2026-01-10 01:15:34] 2026-01-10 06:14:58,770 | INFO     | chi2: 0.8084725689123499
[2026-01-10 01:15:34] 2026-01-10 06:14:58,771 | INFO     | current chi2=0.8084725689123499 (change=65.48589797944851 %)
[2026-01-10 01:15:34] 2026-01-10 06:14:58,771 | INFO     | sum of square deviations: 20601533474.31106
[2026-01-10 01:15:34] 2026-01-10 06:14:58,813 | INFO     | sum of deviations: -88970752895.02963
[2026-01-10 01:15:34] 2026-01-10 06:14:58,813 | INFO     | mean x: 1768013257.0814815
[2026-01-10 01:15:34] 2026-01-10 06:14:58,813 | INFO     | mean y: 2565875.5160493827
[2026-01-10 01:15:34] 2026-01-10 06:14:58,813 | INFO     | intersect: 7637991209.609696
[2026-01-10 01:15:34] 2026-01-10 06:14:58,814 | INFO     | chi2: 0.7821370798646956
[2026-01-10 01:15:34] 2026-01-10 06:14:58,814 | INFO     | current chi2=0.7821370798646956 (change=3.2574375507982642 %)
[2026-01-10 01:15:34] 2026-01-10 06:14:58,814 | INFO     | left removable region: 20
[2026-01-10 01:15:34] 2026-01-10 06:14:58,815 | INFO     | sum of square deviations: 17559803605.958294
[2026-01-10 01:15:34] 2026-01-10 06:14:58,915 | INFO     | sum of deviations: -51025464422.38542
[2026-01-10 01:15:34] 2026-01-10 06:14:58,916 | INFO     | mean x: 1768013226.5729167
[2026-01-10 01:15:34] 2026-01-10 06:14:58,916 | INFO     | mean y: 2569965.6744791665
[2026-01-10 01:15:34] 2026-01-10 06:14:58,916 | INFO     | intersect: 5140081638.082502
[2026-01-10 01:15:34] 2026-01-10 06:14:58,917 | INFO     | chi2: 0.05240213743269056
[2026-01-10 01:15:34] 2026-01-10 06:14:58,917 | INFO     | current memory leak: -2.91 B/s (using 384 data points, chi2=0.05)
[2026-01-10 01:15:34] 2026-01-10 06:14:58,918 | INFO     | could have reported an average CPU frequency of 2600 MHz (17 samples)
[2026-01-10 01:15:34] 2026-01-10 06:14:58,918 | INFO     | ..............................
[2026-01-10 01:15:34] 2026-01-10 06:14:58,918 | INFO     | . Timing measurements:
[2026-01-10 01:15:34] 2026-01-10 06:14:58,918 | INFO     | . get job = 0 s
[2026-01-10 01:15:34] 2026-01-10 06:14:58,918 | INFO     | . initial setup = 3 s
[2026-01-10 01:15:34] 2026-01-10 06:14:58,918 | INFO     | . payload setup = 11 s
[2026-01-10 01:15:34] 2026-01-10 06:14:58,918 | INFO     | . stage-in = 0 s
[2026-01-10 01:15:34] 2026-01-10 06:14:58,918 | INFO     | . payload execution = 25305 s
[2026-01-10 01:15:34] 2026-01-10 06:14:58,919 | INFO     | . stage-out = 9 s
[2026-01-10 01:15:34] 2026-01-10 06:14:58,919 | INFO     | . log creation = 2 s
[2026-01-10 01:15:34] 2026-01-10 06:14:58,919 | INFO     | ..............................
[2026-01-10 01:15:34] 2026-01-10 06:14:59,038 | INFO     | time since job start (25416s) is within the limit (349056.0s)
[2026-01-10 01:15:34] 2026-01-10 06:14:59,668 | INFO     | 
[2026-01-10 01:15:34] 2026-01-10 06:14:59,668 | INFO     | job summary report
[2026-01-10 01:15:34] 2026-01-10 06:14:59,668 | INFO     | --------------------------------------------------
[2026-01-10 01:15:34] 2026-01-10 06:14:59,669 | INFO     | PanDA job id: 6963186920
[2026-01-10 01:15:34] 2026-01-10 06:14:59,669 | INFO     | task id: 47898826
[2026-01-10 01:15:34] 2026-01-10 06:14:59,669 | INFO     | errors: (none)
[2026-01-10 01:15:34] 2026-01-10 06:14:59,669 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 01:15:34] 2026-01-10 06:14:59,669 | INFO     | pilot state: finished 
[2026-01-10 01:15:34] 2026-01-10 06:14:59,669 | INFO     | transexitcode: 0
[2026-01-10 01:15:34] 2026-01-10 06:14:59,669 | INFO     | exeerrorcode: 0
[2026-01-10 01:15:34] 2026-01-10 06:14:59,669 | INFO     | exeerrordiag: 
[2026-01-10 01:15:34] 2026-01-10 06:14:59,669 | INFO     | exitcode: 0
[2026-01-10 01:15:34] 2026-01-10 06:14:59,670 | INFO     | exitmsg: OK
[2026-01-10 01:15:34] 2026-01-10 06:14:59,670 | INFO     | cpuconsumptiontime: 68233 s
[2026-01-10 01:15:34] 2026-01-10 06:14:59,670 | INFO     | nevents: 400
[2026-01-10 01:15:34] 2026-01-10 06:14:59,670 | INFO     | neventsw: 0
[2026-01-10 01:15:34] 2026-01-10 06:14:59,670 | INFO     | pid: 3639879
[2026-01-10 01:15:34] 2026-01-10 06:14:59,670 | INFO     | pgrp: 3639879
[2026-01-10 01:15:34] 2026-01-10 06:14:59,670 | INFO     | corecount: 8
[2026-01-10 01:15:34] 2026-01-10 06:14:59,670 | INFO     | event service: False
[2026-01-10 01:15:34] 2026-01-10 06:14:59,670 | INFO     | sizes: {0: 2283799, 1: 2283998, 2: 2283998, 8: 2284288, 12: 2284316, 25320: 2320155, 25322: 2320282, 25332: 2329336, 25333: 2329392, 25396: 2329650}
[2026-01-10 01:15:34] 2026-01-10 06:14:59,671 | INFO     | --------------------------------------------------
[2026-01-10 01:15:34] 2026-01-10 06:14:59,671 | INFO     | 
[2026-01-10 01:15:34] 2026-01-10 06:14:59,671 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-10 01:15:34] 2026-01-10 06:14:59,955 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,956 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,956 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,956 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,956 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,956 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,956 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,956 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,956 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,957 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,957 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,957 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,957 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,957 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,957 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,957 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,957 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,957 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 01:15:34] 2026-01-10 06:14:59,957 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,958 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 01:15:34] 2026-01-10 06:14:59,958 | INFO     | job 6963186920 has completed (purged errors)
[2026-01-10 01:15:34] 2026-01-10 06:14:59,958 | INFO     | overall cleanup function is called
[2026-01-10 01:15:34] 2026-01-10 06:15:01,015 | INFO     | --- collectZombieJob: --- 10, [3639879]
[2026-01-10 01:15:34] 2026-01-10 06:15:01,015 | INFO     | zombie collector waiting for pid 3639879
[2026-01-10 01:15:34] 2026-01-10 06:15:01,015 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 01:15:34] 2026-01-10 06:15:01,016 | INFO     | collected zombie processes
[2026-01-10 01:15:34] 2026-01-10 06:15:01,016 | INFO     | will attempt to kill all subprocesses of pid=3639879
[2026-01-10 01:15:34] 2026-01-10 06:15:03,522 | INFO     | process IDs to be killed: [3639879] (in reverse order)
[2026-01-10 01:15:34] 2026-01-10 06:15:03,619 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 01:15:34] 2026-01-10 06:15:03,620 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 01:15:34] 2026-01-10 06:15:03,631 | INFO     | did not find any defunct processes belonging to 3639879
[2026-01-10 01:15:34] 2026-01-10 06:15:03,686 | INFO     | did not find any defunct processes belonging to 3639879
[2026-01-10 01:15:34] 2026-01-10 06:15:03,686 | INFO     | ready for new job
[2026-01-10 01:15:34] 2026-01-10 06:15:03,686 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 01:15:34] 2026-01-10 06:15:03,689 | INFO     | ***************************************
[2026-01-10 01:15:34] 2026-01-10 06:15:03,689 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 01:15:34] 2026-01-10 06:15:03,689 | INFO     | ***************************************
[2026-01-10 01:15:34] 2026-01-10 06:15:03,690 | INFO     | 
[2026-01-10 01:15:34] 2026-01-10 06:15:03,692 | INFO     | architecture information:
[2026-01-10 01:15:34] 2026-01-10 06:15:03,692 | INFO     | executing command: cat /etc/os-release
[2026-01-10 01:15:34] 2026-01-10 06:15:03,723 | INFO     | cat /etc/os-release:
[2026-01-10 01:15:34] NAME="CentOS Linux"
[2026-01-10 01:15:34] VERSION="7 (Core)"
[2026-01-10 01:15:34] ID="centos"
[2026-01-10 01:15:34] ID_LIKE="rhel fedora"
[2026-01-10 01:15:34] VERSION_ID="7"
[2026-01-10 01:15:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 01:15:34] ANSI_COLOR="0;31"
[2026-01-10 01:15:34] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 01:15:34] HOME_URL="https://www.centos.org/"
[2026-01-10 01:15:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 01:15:34] 
[2026-01-10 01:15:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 01:15:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 01:15:34] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 01:15:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 01:15:34] 
[2026-01-10 01:15:34] 2026-01-10 06:15:03,724 | INFO     | ***************************************
[2026-01-10 01:15:34] 2026-01-10 06:15:04,227 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-10 01:15:34] 2026-01-10 06:15:04,410 | INFO     | sufficient remaining disk space (52451868672 B)
[2026-01-10 01:15:34] 2026-01-10 06:15:04,411 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 01:15:34] 2026-01-10 06:15:04,411 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 01:15:34] 2026-01-10 06:15:04,411 | INFO     | update_server=False
[2026-01-10 01:15:34] 2026-01-10 06:15:04,411 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 01:15:34] 2026-01-10 06:15:04,490 | INFO     | all job control threads have been joined
[2026-01-10 01:15:34] 2026-01-10 06:15:04,492 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 01:15:34] 2026-01-10 06:15:04,682 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 01:15:34] 2026-01-10 06:15:05,227 | INFO     | all data control threads have been joined
[2026-01-10 01:15:34] 2026-01-10 06:15:05,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 01:15:34] 2026-01-10 06:15:05,282 | INFO     | aborting loop
[2026-01-10 01:15:34] 2026-01-10 06:15:05,417 | INFO     | [job] retrieve thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:05,496 | INFO     | [job] control thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:05,506 | INFO     | all payload control threads have been joined
[2026-01-10 01:15:34] 2026-01-10 06:15:05,688 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:05,692 | INFO     | [job] queue monitor thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:06,233 | INFO     | [data] control thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:06,288 | INFO     | [job] job monitor thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:06,316 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:06,512 | INFO     | [payload] control thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:06,529 | INFO     | [data] copytool_out thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:06,544 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:06,824 | INFO     | [payload] failed_post thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:06,850 | INFO     | [job] validate thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:06,861 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:06,869 | INFO     | [data] copytool_in thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:06,930 | INFO     | [payload] validate_post thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:07,312 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 01:15:34] 2026-01-10 06:15:10,087 | INFO     | [monitor] cgroup control has ended
[2026-01-10 01:15:34] 2026-01-10 06:15:11,321 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 01:15:34] 2026-01-10 06:15:12,014 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140276351649600)>', '<ExcThread(monitor, started 140275905193728)>']
[2026-01-10 01:15:34] 2026-01-10 06:15:17,040 | INFO     | all workflow threads have been joined
[2026-01-10 01:15:34] 2026-01-10 06:15:17,040 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 01:15:34] 2026-01-10 06:15:17,041 | INFO     | traces error code: 0
[2026-01-10 01:15:34] 2026-01-10 06:15:17,041 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 01:15:34] 2026-01-10 06:15:33,073 | INFO     | PID=3631938 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 01:15:34] 2026-01-10 06:15:33,074 | INFO     | .. there are 14 such processes running
[2026-01-10 01:15:34] 2026-01-10 06:15:33,075 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 01:15:34] 2026-01-10 06:15:33,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 01:15:34] 2026-01-10 06:15:33,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 01:15:34] 2026-01-10 06:15:33,075 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 01:15:34] 2026-01-10 06:15:33,075 | CRITICAL | thread 'MainThread' is not alive
[2026-01-10 01:15:34] 2026-01-10 06:15:33,075 | INFO     | [monitor] control thread has ended
[2026-01-10 01:15:34] 2026-01-10 06:15:33,275 [wrapper] ==== pilot stdout END ====
[2026-01-10 01:15:34] 2026-01-10 06:15:33,320 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 01:15:34] 2026-01-10 06:15:33,387 [wrapper] pilotpid: 3631938
[2026-01-10 01:15:34] 2026-01-10 06:15:33,453 [wrapper] Pilot exit status: 0
[2026-01-10 01:15:34] 2026-01-10 06:15:33,698 [wrapper] pandaids: 6963186920
[2026-01-10 01:15:34] 2026-01-10 06:15:33,891 [wrapper] cleanup supervisor_pilot  700026 3631939
[2026-01-10 01:15:34] 2026-01-10 06:15:33,943 [wrapper] Test setup, not cleaning
[2026-01-10 01:15:34] 2026-01-10 06:15:34,062 [wrapper] apfmon messages muted
[2026-01-10 01:15:34] 2026-01-10 06:15:34,099 [wrapper] ==== wrapper stdout END ====
[2026-01-10 01:15:34] 2026-01-10 06:15:34,160 [wrapper] ==== wrapper stderr END ====
[2026-01-10 01:15:34]  *** Error codes and diagnostics ***
[2026-01-10 01:15:34]     "exeErrorCode": 0,
[2026-01-10 01:15:34]     "exeErrorDiag": "",
[2026-01-10 01:15:34]     "pilotErrorCode": 0,
[2026-01-10 01:15:34]     "pilotErrorDiag": "",
[2026-01-10 01:15:34]  *** Listing of results directory ***
[2026-01-10 01:15:34] total 446148
[2026-01-10 01:15:34] -rwx------. 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-10 01:15:34] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-10 01:15:34] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-10 01:15:34] -rw-r--r--. 1 boincer umatlas       100 Jan  9 18:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 01:15:34] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 18:11 run_atlas
[2026-01-10 01:15:34] -rw-r--r--. 1 boincer umatlas       105 Jan  9 18:11 job.xml
[2026-01-10 01:15:34] -rw-r--r--. 2 boincer umatlas 223635299 Jan  9 18:11 EVNT.47898824._001412.pool.root.1
[2026-01-10 01:15:34] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:11 start_atlas.sh
[2026-01-10 01:15:34] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 18:11 shared
[2026-01-10 01:15:34] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 18:11 input.tar.gz
[2026-01-10 01:15:34] -rw-r--r--. 1 boincer umatlas         0 Jan  9 18:11 boinc_lockfile
[2026-01-10 01:15:34] -rw-r--r--. 1 boincer umatlas      2519 Jan  9 18:11 pandaJob.out
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas        57 Jan  9 18:11 setup.sh.local
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas    989375 Jan  9 18:11 agis_schedconf.cvmfs.json
[2026-01-10 01:15:34] drwx------. 5 boincer umatlas      4096 Jan  9 18:11 pilot3
[2026-01-10 01:15:34] -rw-r--r--. 1 boincer umatlas      6660 Jan 10 01:10 init_data.xml
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas 221843723 Jan 10 01:11 HITS.47898826._036828.pool.root.1
[2026-01-10 01:15:34] -rw-r--r--. 1 boincer umatlas       531 Jan 10 01:12 boinc_task_state.xml
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas      1042 Jan 10 01:13 memory_monitor_summary.json
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas   1516240 Jan 10 01:13 agis_ddmendpoints.agis.ALL.json
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas    582425 Jan 10 01:13 log.47898826._036828.job.log.tgz.1
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas      7823 Jan 10 01:14 heartbeat.json
[2026-01-10 01:15:34] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 01:15 boinc_mmap_file
[2026-01-10 01:15:34] -rw-r--r--. 1 boincer umatlas        28 Jan 10 01:15 wrapper_checkpoint.txt
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas        95 Jan 10 01:15 pilot_heartbeat.json
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas       893 Jan 10 01:15 pilotlog.txt
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas   3151014 Jan 10 01:15 log.47898826._036828.job.log.1
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas       357 Jan 10 01:15 output.list
[2026-01-10 01:15:34] -rw-r--r--. 1 boincer umatlas       620 Jan 10 01:15 runtime_log
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas   3747840 Jan 10 01:15 result.tar.gz
[2026-01-10 01:15:34] -rw-r--r--. 1 boincer umatlas      9338 Jan 10 01:15 runtime_log.err
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas       657 Jan 10 01:15 GNxKDmm3Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqpgKDmlPmvOn.diag
[2026-01-10 01:15:34] -rw-r--r--. 1 boincer umatlas     21177 Jan 10 01:15 stderr.txt
[2026-01-10 01:15:34] HITS file was successfully produced:
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas 221843723 Jan 10 01:11 shared/HITS.pool.root.1
[2026-01-10 01:15:34]  *** Contents of shared directory: ***
[2026-01-10 01:15:34] total 439304
[2026-01-10 01:15:34] -rw-r--r--. 2 boincer umatlas 223635299 Jan  9 18:11 ATLAS.root_0
[2026-01-10 01:15:34] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 18:11 start_atlas.sh
[2026-01-10 01:15:34] -rw-r--r--. 2 boincer umatlas    592401 Jan  9 18:11 input.tar.gz
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas 221843723 Jan 10 01:11 HITS.pool.root.1
[2026-01-10 01:15:34] -rw-------. 1 boincer umatlas   3747840 Jan 10 01:15 result.tar.gz
01:15:35 (3628285): run_atlas exited; CPU time 68900.745323
01:15:35 (3628285): called boinc_finish(0)

</stderr_txt>
]]>

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