Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:38:18 (2191324): wrapper (7.7.26015): starting
21:38:18 (2191324): wrapper: running run_atlas (--nthreads 9)
[2026-01-09 21:38:18] Arguments: --nthreads 9
[2026-01-09 21:38:18] Threads: 9
[2026-01-09 21:38:18] Checking for CVMFS
[2026-01-09 21:38:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-09 21:38:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-09 21:38:19] Running cvmfs_config stat atlas.cern.ch
[2026-01-09 21:38:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-09 21:38:20] 2.13.3.0 6592 14838 145624 154964 1 411 23046724 40960000 15291 16776704 0 20196300 99.806 13481951 44262 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-09 21:38:20] CVMFS is ok
[2026-01-09 21:38:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-09 21:38:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-09 21:38:20] Further information can be found at the LHC@home message board.
[2026-01-09 21:38:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-09 21:38:20] Checking for apptainer binary...
[2026-01-09 21:38:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-09 21:38:20] Running /usr/bin/apptainer --version
[2026-01-09 21:38:20] apptainer version 1.4.5-2.el9
[2026-01-09 21:38:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-09 21:38:21] c-211-35-2.aglt2.org
[2026-01-09 21:38:21] apptainer works
[2026-01-09 21:38:21] Set ATHENA_PROC_NUMBER=9
[2026-01-09 21:38:21] Set ATHENA_CORE_NUMBER=9
[2026-01-09 21:38:21] Starting ATLAS job with PandaID=6963187126
[2026-01-09 21:38:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
01:20:05 (2191324): BOINC client no longer exists - exiting
01:20:05 (2191324): timer handler: client dead, exiting
01:27:57 (2644252): wrapper (7.7.26015): starting
01:27:57 (2644252): wrapper: running run_atlas (--nthreads 10)
[2026-01-10 01:27:57] Arguments: --nthreads 10
[2026-01-10 01:27:57] Threads: 10
[2026-01-10 01:27:57] This job has been restarted, cleaning up previous attempt
[2026-01-10 01:27:57] Checking for CVMFS
[2026-01-10 01:27:57] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-10 01:27:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-10 01:27:57] Running cvmfs_config stat atlas.cern.ch
[2026-01-10 01:27:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-10 01:27:57] 2.13.3.0 6592 15068 141512 154970 0 296 24511322 40960001 17077 16776704 0 20535040 99.804 13786779 43767 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-10 01:27:57] CVMFS is ok
[2026-01-10 01:27:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-10 01:27:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-10 01:27:57] Further information can be found at the LHC@home message board.
[2026-01-10 01:27:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-10 01:27:57] Checking for apptainer binary...
[2026-01-10 01:27:57] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-10 01:27:57] Running /usr/bin/apptainer --version
[2026-01-10 01:27:57] apptainer version 1.4.5-2.el9
[2026-01-10 01:27:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-10 01:27:57] c-211-35-2.aglt2.org
[2026-01-10 01:27:57] apptainer works
[2026-01-10 01:27:57] Set ATHENA_PROC_NUMBER=10
[2026-01-10 01:27:57] Set ATHENA_CORE_NUMBER=10
[2026-01-10 01:27:57] Starting ATLAS job with PandaID=6963187126
[2026-01-10 01:27:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-10 04:52:42]  *** The last 200 lines of the pilot log: ***
[2026-01-10 04:52:43] 2026-01-10 09:52:06,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-10 04:52:43] 2026-01-10 09:52:07,341 | INFO     | time since job start (12238s) is within the limit (349056.0s)
[2026-01-10 04:52:43] 2026-01-10 09:52:07,812 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-10 04:52:43] 2026-01-10 09:52:07,852 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2705.896333333334
[2026-01-10 04:52:43] 2026-01-10 09:52:07,870 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6963187126/memory_monitor_summary.json (trf name=prmon)
[2026-01-10 04:52:43] 2026-01-10 09:52:07,871 | INFO     | extracted standard info from prmon json
[2026-01-10 04:52:43] 2026-01-10 09:52:07,871 | INFO     | extracted standard memory fields from prmon json
[2026-01-10 04:52:43] 2026-01-10 09:52:07,871 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-10 04:52:43] 2026-01-10 09:52:07,871 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-10 04:52:43] 2026-01-10 09:52:07,871 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-10 04:52:43] 2026-01-10 09:52:07,875 | INFO     | fitting pss+swap vs Time
[2026-01-10 04:52:43] 2026-01-10 09:52:07,876 | INFO     | sum of square deviations: 2480563483.59499
[2026-01-10 04:52:43] 2026-01-10 09:52:07,877 | INFO     | sum of deviations: -37531613131.615
[2026-01-10 04:52:43] 2026-01-10 09:52:07,877 | INFO     | mean x: 1768032589.545
[2026-01-10 04:52:43] 2026-01-10 09:52:07,877 | INFO     | mean y: 2664499.235
[2026-01-10 04:52:43] 2026-01-10 09:52:07,877 | INFO     | intersect: 26753487686.683304
[2026-01-10 04:52:43] 2026-01-10 09:52:07,879 | INFO     | chi2: 2.337788881448698
[2026-01-10 04:52:43] 2026-01-10 09:52:07,880 | INFO     | sum of square deviations: 2299130268.5846267
[2026-01-10 04:52:43] 2026-01-10 09:52:07,881 | INFO     | sum of deviations: -23243392648.400013
[2026-01-10 04:52:43] 2026-01-10 09:52:07,881 | INFO     | mean x: 1768032437.0461538
[2026-01-10 04:52:43] 2026-01-10 09:52:07,881 | INFO     | mean y: 2676284.6
[2026-01-10 04:52:43] 2026-01-10 09:52:07,881 | INFO     | intersect: 17876857974.474392
[2026-01-10 04:52:43] 2026-01-10 09:52:07,881 | INFO     | chi2: 1.6561312459940551
[2026-01-10 04:52:43] 2026-01-10 09:52:07,881 | INFO     | current chi2=1.6561312459940551 (change=29.158220439145392 %)
[2026-01-10 04:52:43] 2026-01-10 09:52:07,882 | INFO     | sum of square deviations: 2126766991.0736806
[2026-01-10 04:52:43] 2026-01-10 09:52:07,883 | INFO     | sum of deviations: -22364440035.54737
[2026-01-10 04:52:43] 2026-01-10 09:52:07,883 | INFO     | mean x: 1768032284.5473685
[2026-01-10 04:52:43] 2026-01-10 09:52:07,883 | INFO     | mean y: 2677062.505263158
[2026-01-10 04:52:43] 2026-01-10 09:52:07,883 | INFO     | intersect: 18594771153.973873
[2026-01-10 04:52:43] 2026-01-10 09:52:07,883 | INFO     | chi2: 1.6537373645943008
[2026-01-10 04:52:43] 2026-01-10 09:52:07,883 | INFO     | current chi2=1.6537373645943008 (change=0.1445465995249374 %)
[2026-01-10 04:52:43] 2026-01-10 09:52:07,884 | INFO     | right removable region: 189
[2026-01-10 04:52:43] 2026-01-10 09:52:07,884 | INFO     | sum of square deviations: 2299124778.5846267
[2026-01-10 04:52:43] 2026-01-10 09:52:07,885 | INFO     | sum of deviations: -66278231991.66153
[2026-01-10 04:52:43] 2026-01-10 09:52:07,885 | INFO     | mean x: 1768032742.0461538
[2026-01-10 04:52:43] 2026-01-10 09:52:07,885 | INFO     | mean y: 2688352.8512820513
[2026-01-10 04:52:43] 2026-01-10 09:52:07,885 | INFO     | intersect: 50970815588.784676
[2026-01-10 04:52:43] 2026-01-10 09:52:07,886 | INFO     | chi2: 1.0074681747030345
[2026-01-10 04:52:43] 2026-01-10 09:52:07,886 | INFO     | current chi2=1.0074681747030345 (change=56.90508314511619 %)
[2026-01-10 04:52:43] 2026-01-10 09:52:07,886 | INFO     | sum of square deviations: 2126756011.0736806
[2026-01-10 04:52:43] 2026-01-10 09:52:07,887 | INFO     | sum of deviations: -60164800136.23163
[2026-01-10 04:52:43] 2026-01-10 09:52:07,887 | INFO     | mean x: 1768032894.5473685
[2026-01-10 04:52:43] 2026-01-10 09:52:07,887 | INFO     | mean y: 2682901.136842105
[2026-01-10 04:52:43] 2026-01-10 09:52:07,887 | INFO     | intersect: 50019396233.957535
[2026-01-10 04:52:43] 2026-01-10 09:52:07,888 | INFO     | chi2: 0.9928155491716674
[2026-01-10 04:52:43] 2026-01-10 09:52:07,888 | INFO     | current chi2=0.9928155491716674 (change=1.4544008336229792 %)
[2026-01-10 04:52:43] 2026-01-10 09:52:07,888 | INFO     | left removable region: 20
[2026-01-10 04:52:43] 2026-01-10 09:52:07,888 | INFO     | sum of square deviations: 1496636714.710063
[2026-01-10 04:52:43] 2026-01-10 09:52:07,889 | INFO     | sum of deviations: -27368445578.10059
[2026-01-10 04:52:43] 2026-01-10 09:52:07,889 | INFO     | mean x: 1768032864.0414202
[2026-01-10 04:52:43] 2026-01-10 09:52:07,889 | INFO     | mean y: 2679007.5857988168
[2026-01-10 04:52:43] 2026-01-10 09:52:07,889 | INFO     | intersect: 32334046228.64518
[2026-01-10 04:52:43] 2026-01-10 09:52:07,890 | INFO     | chi2: 0.2323183836676528
[2026-01-10 04:52:43] 2026-01-10 09:52:07,890 | INFO     | current memory leak: -18.29 B/s (using 169 data points, chi2=0.23)
[2026-01-10 04:52:43] 2026-01-10 09:52:07,890 | INFO     | could have reported an average CPU frequency of 2693 MHz (10 samples)
[2026-01-10 04:52:43] 2026-01-10 09:52:07,891 | INFO     | ..............................
[2026-01-10 04:52:43] 2026-01-10 09:52:07,891 | INFO     | . Timing measurements:
[2026-01-10 04:52:43] 2026-01-10 09:52:07,891 | INFO     | . get job = 0 s
[2026-01-10 04:52:43] 2026-01-10 09:52:07,891 | INFO     | . initial setup = 2 s
[2026-01-10 04:52:43] 2026-01-10 09:52:07,891 | INFO     | . payload setup = 6 s
[2026-01-10 04:52:43] 2026-01-10 09:52:07,891 | INFO     | . stage-in = 0 s
[2026-01-10 04:52:43] 2026-01-10 09:52:07,891 | INFO     | . payload execution = 12167 s
[2026-01-10 04:52:43] 2026-01-10 09:52:07,891 | INFO     | . stage-out = 5 s
[2026-01-10 04:52:43] 2026-01-10 09:52:07,891 | INFO     | . log creation = 1 s
[2026-01-10 04:52:43] 2026-01-10 09:52:07,891 | INFO     | ..............................
[2026-01-10 04:52:43] 2026-01-10 09:52:08,044 | INFO     | 
[2026-01-10 04:52:43] 2026-01-10 09:52:08,044 | INFO     | job summary report
[2026-01-10 04:52:43] 2026-01-10 09:52:08,044 | INFO     | --------------------------------------------------
[2026-01-10 04:52:43] 2026-01-10 09:52:08,049 | INFO     | PanDA job id: 6963187126
[2026-01-10 04:52:43] 2026-01-10 09:52:08,049 | INFO     | task id: 47898826
[2026-01-10 04:52:43] 2026-01-10 09:52:08,049 | INFO     | errors: (none)
[2026-01-10 04:52:43] 2026-01-10 09:52:08,049 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-10 04:52:43] 2026-01-10 09:52:08,049 | INFO     | pilot state: finished 
[2026-01-10 04:52:43] 2026-01-10 09:52:08,049 | INFO     | transexitcode: 0
[2026-01-10 04:52:43] 2026-01-10 09:52:08,049 | INFO     | exeerrorcode: 0
[2026-01-10 04:52:43] 2026-01-10 09:52:08,049 | INFO     | exeerrordiag: 
[2026-01-10 04:52:43] 2026-01-10 09:52:08,049 | INFO     | exitcode: 0
[2026-01-10 04:52:43] 2026-01-10 09:52:08,049 | INFO     | exitmsg: OK
[2026-01-10 04:52:43] 2026-01-10 09:52:08,050 | INFO     | cpuconsumptiontime: 59589 s
[2026-01-10 04:52:43] 2026-01-10 09:52:08,050 | INFO     | nevents: 400
[2026-01-10 04:52:43] 2026-01-10 09:52:08,050 | INFO     | neventsw: 0
[2026-01-10 04:52:43] 2026-01-10 09:52:08,050 | INFO     | pid: 2664438
[2026-01-10 04:52:43] 2026-01-10 09:52:08,050 | INFO     | pgrp: 2664438
[2026-01-10 04:52:43] 2026-01-10 09:52:08,050 | INFO     | corecount: 10
[2026-01-10 04:52:43] 2026-01-10 09:52:08,050 | INFO     | event service: False
[2026-01-10 04:52:43] 2026-01-10 09:52:08,050 | INFO     | sizes: {0: 2283968, 5: 2284230, 11: 2284286, 12178: 2314265, 12180: 2314264, 12185: 2323502, 12222: 2323640}
[2026-01-10 04:52:43] 2026-01-10 09:52:08,050 | INFO     | --------------------------------------------------
[2026-01-10 04:52:43] 2026-01-10 09:52:08,050 | INFO     | 
[2026-01-10 04:52:43] 2026-01-10 09:52:08,050 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-10 04:52:43] 2026-01-10 09:52:08,094 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,094 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,094 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,094 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,094 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,095 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,095 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,095 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,095 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,095 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,095 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,095 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,095 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,095 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,095 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,095 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,095 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,095 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-10 04:52:43] 2026-01-10 09:52:08,096 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,096 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-10 04:52:43] 2026-01-10 09:52:08,096 | INFO     | job 6963187126 has completed (purged errors)
[2026-01-10 04:52:43] 2026-01-10 09:52:08,096 | INFO     | overall cleanup function is called
[2026-01-10 04:52:43] 2026-01-10 09:52:09,109 | INFO     | --- collectZombieJob: --- 10, [2664438]
[2026-01-10 04:52:43] 2026-01-10 09:52:09,109 | INFO     | zombie collector waiting for pid 2664438
[2026-01-10 04:52:43] 2026-01-10 09:52:09,109 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-10 04:52:43] 2026-01-10 09:52:09,109 | INFO     | collected zombie processes
[2026-01-10 04:52:43] 2026-01-10 09:52:09,109 | INFO     | will attempt to kill all subprocesses of pid=2664438
[2026-01-10 04:52:43] 2026-01-10 09:52:09,781 | INFO     | process IDs to be killed: [2664438] (in reverse order)
[2026-01-10 04:52:43] 2026-01-10 09:52:10,061 | WARNING  | found no corresponding commands to process id(s)
[2026-01-10 04:52:43] 2026-01-10 09:52:10,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-10 04:52:43] 2026-01-10 09:52:10,085 | INFO     | did not find any defunct processes belonging to 2664438
[2026-01-10 04:52:43] 2026-01-10 09:52:10,127 | INFO     | did not find any defunct processes belonging to 2664438
[2026-01-10 04:52:43] 2026-01-10 09:52:10,128 | INFO     | ready for new job
[2026-01-10 04:52:43] 2026-01-10 09:52:10,128 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-10 04:52:43] 2026-01-10 09:52:10,134 | INFO     | ***************************************
[2026-01-10 04:52:43] 2026-01-10 09:52:10,134 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-10 04:52:43] 2026-01-10 09:52:10,134 | INFO     | ***************************************
[2026-01-10 04:52:43] 2026-01-10 09:52:10,134 | INFO     | 
[2026-01-10 04:52:43] 2026-01-10 09:52:10,153 | INFO     | architecture information:
[2026-01-10 04:52:43] 2026-01-10 09:52:10,158 | INFO     | executing command: cat /etc/os-release
[2026-01-10 04:52:43] 2026-01-10 09:52:10,216 | INFO     | cat /etc/os-release:
[2026-01-10 04:52:43] NAME="CentOS Linux"
[2026-01-10 04:52:43] VERSION="7 (Core)"
[2026-01-10 04:52:43] ID="centos"
[2026-01-10 04:52:43] ID_LIKE="rhel fedora"
[2026-01-10 04:52:43] VERSION_ID="7"
[2026-01-10 04:52:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-10 04:52:43] ANSI_COLOR="0;31"
[2026-01-10 04:52:43] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-10 04:52:43] HOME_URL="https://www.centos.org/"
[2026-01-10 04:52:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-10 04:52:43] 
[2026-01-10 04:52:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-10 04:52:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-10 04:52:43] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-10 04:52:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-10 04:52:43] 
[2026-01-10 04:52:43] 2026-01-10 09:52:10,216 | INFO     | ***************************************
[2026-01-10 04:52:43] 2026-01-10 09:52:10,720 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-10 04:52:43] 2026-01-10 09:52:10,778 | INFO     | sufficient remaining disk space (128804978688 B)
[2026-01-10 04:52:43] 2026-01-10 09:52:10,778 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-10 04:52:43] 2026-01-10 09:52:10,779 | INFO     | current server update state: UPDATING_FINAL
[2026-01-10 04:52:43] 2026-01-10 09:52:10,779 | INFO     | update_server=False
[2026-01-10 04:52:43] 2026-01-10 09:52:10,779 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-10 04:52:43] 2026-01-10 09:52:10,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:52:43] 2026-01-10 09:52:10,779 | INFO     | aborting loop
[2026-01-10 04:52:43] 2026-01-10 09:52:10,954 | INFO     | all job control threads have been joined
[2026-01-10 04:52:43] 2026-01-10 09:52:11,014 | INFO     | all data control threads have been joined
[2026-01-10 04:52:43] 2026-01-10 09:52:11,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-10 04:52:43] 2026-01-10 09:52:11,785 | INFO     | [job] retrieve thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:11,785 | INFO     | [job] job monitor thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:11,960 | INFO     | [job] control thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:12,020 | INFO     | [data] control thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:12,121 | INFO     | [payload] validate_pre thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:12,151 | INFO     | all payload control threads have been joined
[2026-01-10 04:52:43] 2026-01-10 09:52:12,713 | INFO     | [job] validate thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:13,005 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-10 04:52:43] 2026-01-10 09:52:13,062 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-10 04:52:43] 2026-01-10 09:52:13,157 | INFO     | [payload] control thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:13,209 | INFO     | [payload] validate_post thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:13,218 | INFO     | [data] copytool_in thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:13,274 | INFO     | [job] create_data_payload thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:13,274 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:13,278 | INFO     | [payload] execute_payloads thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:13,324 | INFO     | [payload] failed_post thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:13,358 | INFO     | [data] copytool_out thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:14,068 | INFO     | [job] queue monitor thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:17,014 | INFO     | [data] queue_monitor thread has finished
[2026-01-10 04:52:43] 2026-01-10 09:52:30,609 | INFO     | [monitor] cgroup control has ended
[2026-01-10 04:52:43] 2026-01-10 09:52:31,616 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140574730610496)>', '<ExcThread(monitor, started 140574363457280)>']
[2026-01-10 04:52:43] 2026-01-10 09:52:36,642 | INFO     | all workflow threads have been joined
[2026-01-10 04:52:43] 2026-01-10 09:52:36,642 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-10 04:52:43] 2026-01-10 09:52:36,642 | INFO     | traces error code: 0
[2026-01-10 04:52:43] 2026-01-10 09:52:36,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-10 04:52:43] 2026-01-10 09:52:41,282 | INFO     | PID=2651706 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-10 04:52:43] 2026-01-10 09:52:41,283 | INFO     | .. there are 14 such processes running
[2026-01-10 04:52:43] 2026-01-10 09:52:41,283 | INFO     | found 0 job(s) in 20 queues
[2026-01-10 04:52:43] 2026-01-10 09:52:41,284 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-10 04:52:43] 2026-01-10 09:52:41,284 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-10 04:52:43] 2026-01-10 09:52:41,284 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-10 04:52:43] 2026-01-10 09:52:41,284 | INFO     | [monitor] control thread has ended
[2026-01-10 04:52:43] 2026-01-10 09:52:41,579 [wrapper] ==== pilot stdout END ====
[2026-01-10 04:52:43] 2026-01-10 09:52:41,623 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-10 04:52:43] 2026-01-10 09:52:41,649 [wrapper] pilotpid: 2651706
[2026-01-10 04:52:43] 2026-01-10 09:52:41,665 [wrapper] Pilot exit status: 0
[2026-01-10 04:52:43] 2026-01-10 09:52:41,751 [wrapper] pandaids: 6963187126 6963187126
[2026-01-10 04:52:43] 2026-01-10 09:52:42,249 [wrapper] cleanup supervisor_pilot 2973452 2651707
[2026-01-10 04:52:43] 2026-01-10 09:52:42,286 [wrapper] Test setup, not cleaning
[2026-01-10 04:52:43] 2026-01-10 09:52:42,354 [wrapper] apfmon messages muted
[2026-01-10 04:52:43] 2026-01-10 09:52:42,457 [wrapper] ==== wrapper stdout END ====
[2026-01-10 04:52:43] 2026-01-10 09:52:42,486 [wrapper] ==== wrapper stderr END ====
[2026-01-10 04:52:43]  *** Error codes and diagnostics ***
[2026-01-10 04:52:43]     "exeErrorCode": 0,
[2026-01-10 04:52:43]     "exeErrorDiag": "",
[2026-01-10 04:52:43]     "pilotErrorCode": 0,
[2026-01-10 04:52:43]     "pilotErrorDiag": "",
[2026-01-10 04:52:43]  *** Listing of results directory ***
[2026-01-10 04:52:43] total 660608
[2026-01-10 04:52:43] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-10 04:52:43] -rwx------. 1 boincer umatlas     36322 Jan  8 20:01 runpilot2-wrapper.sh
[2026-01-10 04:52:43] -rw-r--r--. 1 boincer umatlas    579449 Jan  8 20:06 pilot3.tar.gz
[2026-01-10 04:52:43] -rw-r--r--. 1 boincer umatlas      5112 Jan  8 20:06 queuedata.json
[2026-01-10 04:52:43] -rw-r--r--. 1 boincer umatlas       100 Jan  9 21:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-10 04:52:43] -rwxr-xr-x. 1 boincer umatlas      7986 Jan  9 21:38 run_atlas
[2026-01-10 04:52:43] -rw-r--r--. 1 boincer umatlas       105 Jan  9 21:38 job.xml
[2026-01-10 04:52:43] -rw-r--r--. 3 boincer umatlas 224448142 Jan  9 21:38 EVNT.47898824._001419.pool.root.1
[2026-01-10 04:52:43] -rw-r--r--. 3 boincer umatlas 224448142 Jan  9 21:38 ATLAS.root_0
[2026-01-10 04:52:43] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:38 start_atlas.sh
[2026-01-10 04:52:43] drwxrwx--x. 2 boincer umatlas      4096 Jan  9 21:38 shared
[2026-01-10 04:52:43] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 21:38 input.tar.gz
[2026-01-10 04:52:43] -rw-r--r--. 1 boincer umatlas         0 Jan  9 21:38 boinc_lockfile
[2026-01-10 04:52:43] -rw-r--r--. 1 boincer umatlas      2518 Jan 10 01:27 pandaJob.out
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas        57 Jan 10 01:27 setup.sh.local
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas    989374 Jan 10 01:28 agis_schedconf.cvmfs.json
[2026-01-10 04:52:43] -rw-r--r--. 1 boincer umatlas      6860 Jan 10 04:49 init_data.xml
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas 219465818 Jan 10 04:50 HITS.47898826._037000.pool.root.1
[2026-01-10 04:52:43] -rw-r--r--. 1 boincer umatlas       531 Jan 10 04:50 boinc_task_state.xml
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas      1038 Jan 10 04:51 memory_monitor_summary.json
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas   1516240 Jan 10 04:51 agis_ddmendpoints.agis.ALL.json
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas    447185 Jan 10 04:51 log.47898826._037000.job.log.tgz.1
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas      7828 Jan 10 04:52 heartbeat.json
[2026-01-10 04:52:43] -rw-r--r--. 1 boincer umatlas      8192 Jan 10 04:52 boinc_mmap_file
[2026-01-10 04:52:43] -rw-r--r--. 1 boincer umatlas        28 Jan 10 04:52 wrapper_checkpoint.txt
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas        96 Jan 10 04:52 pilot_heartbeat.json
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas       823 Jan 10 04:52 pilotlog.txt
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas   1644045 Jan 10 04:52 log.47898826._037000.job.log.1
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas       357 Jan 10 04:52 output.list
[2026-01-10 04:52:43] -rw-r--r--. 1 boincer umatlas       620 Jan 10 04:52 runtime_log
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas   2109440 Jan 10 04:52 result.tar.gz
[2026-01-10 04:52:43] -rw-r--r--. 1 boincer umatlas      9440 Jan 10 04:52 runtime_log.err
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas       783 Jan 10 04:52 q4HMDmx3Fy8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtqgKDmEgCEdn.diag
[2026-01-10 04:52:43] -rw-r--r--. 1 boincer umatlas     23465 Jan 10 04:52 stderr.txt
[2026-01-10 04:52:43] HITS file was successfully produced:
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas 219465818 Jan 10 04:50 shared/HITS.pool.root.1
[2026-01-10 04:52:43]  *** Contents of shared directory: ***
[2026-01-10 04:52:43] total 436176
[2026-01-10 04:52:43] -rw-r--r--. 3 boincer umatlas 224448142 Jan  9 21:38 ATLAS.root_0
[2026-01-10 04:52:43] -rw-r--r--. 2 boincer umatlas     15847 Jan  9 21:38 start_atlas.sh
[2026-01-10 04:52:43] -rw-r--r--. 2 boincer umatlas    592399 Jan  9 21:38 input.tar.gz
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas 219465818 Jan 10 04:50 HITS.pool.root.1
[2026-01-10 04:52:43] -rw-------. 1 boincer umatlas   2109440 Jan 10 04:52 result.tar.gz
04:52:45 (2644252): run_atlas exited; CPU time 60011.037610
04:52:45 (2644252): called boinc_finish(0)

</stderr_txt>
]]>

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